Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80099.t1 | XP_003618755.1 | 89.6 | 366 | 14 | 1 | 1 | 342 | 1 | 366 | 8.80E-170 | 606.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80099.t1 | Q8LB81 | 62.3 | 342 | 106 | 1 | 24 | 342 | 25 | 366 | 4.6e-119 | 429.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80099.t1 | G7KMT3 | 89.6 | 366 | 14 | 1 | 1 | 342 | 1 | 366 | 6.4e-170 | 606.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053074 | MS.gene80099 | 0.80166 | 8.11E-49 | -1.69E-46 |
| MS.gene054010 | MS.gene80099 | 0.804019 | 2.64E-49 | -1.69E-46 |
| MS.gene055359 | MS.gene80099 | 0.810634 | 1.05E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80099.t1 | MTR_6g021530 | 89.617 | 366 | 14 | 1 | 1 | 342 | 1 | 366 | 0.0 | 662 |
| MS.gene80099.t1 | MTR_7g116570 | 67.297 | 370 | 93 | 2 | 1 | 342 | 1 | 370 | 0.0 | 508 |
| MS.gene80099.t1 | MTR_7g008060 | 67.227 | 357 | 101 | 3 | 1 | 342 | 1 | 356 | 6.71e-177 | 494 |
| MS.gene80099.t1 | MTR_7g116520 | 70.058 | 344 | 79 | 2 | 20 | 340 | 26 | 368 | 2.43e-175 | 491 |
| MS.gene80099.t1 | MTR_7g116510 | 63.462 | 364 | 104 | 3 | 3 | 342 | 4 | 362 | 8.31e-165 | 464 |
| MS.gene80099.t1 | MTR_1g024890 | 63.128 | 358 | 108 | 2 | 6 | 339 | 8 | 365 | 1.66e-164 | 464 |
| MS.gene80099.t1 | MTR_7g116500 | 64.327 | 342 | 99 | 1 | 24 | 342 | 28 | 369 | 3.53e-163 | 460 |
| MS.gene80099.t1 | MTR_4g019880 | 62.534 | 363 | 107 | 4 | 5 | 342 | 12 | 370 | 3.48e-162 | 457 |
| MS.gene80099.t1 | MTR_1g079540 | 64.286 | 336 | 97 | 1 | 28 | 340 | 30 | 365 | 6.72e-160 | 452 |
| MS.gene80099.t1 | MTR_1g069175 | 56.180 | 356 | 131 | 3 | 10 | 340 | 14 | 369 | 3.76e-149 | 425 |
| MS.gene80099.t1 | MTR_1g079530 | 59.497 | 358 | 113 | 5 | 8 | 340 | 7 | 357 | 2.86e-147 | 419 |
| MS.gene80099.t1 | MTR_1g079590 | 55.072 | 207 | 66 | 4 | 1 | 181 | 1 | 206 | 1.50e-67 | 211 |
| MS.gene80099.t1 | MTR_8g079050 | 36.391 | 338 | 185 | 6 | 31 | 338 | 39 | 376 | 2.36e-64 | 208 |
| MS.gene80099.t1 | MTR_5g078210 | 36.943 | 314 | 171 | 5 | 32 | 321 | 28 | 338 | 3.46e-64 | 207 |
| MS.gene80099.t1 | MTR_3g098270 | 34.954 | 329 | 186 | 5 | 31 | 332 | 36 | 363 | 1.83e-60 | 199 |
| MS.gene80099.t1 | MTR_3g024510 | 35.174 | 344 | 191 | 7 | 8 | 326 | 15 | 351 | 7.78e-60 | 196 |
| MS.gene80099.t1 | MTR_8g087890 | 34.072 | 361 | 205 | 9 | 6 | 338 | 8 | 363 | 9.51e-60 | 196 |
| MS.gene80099.t1 | MTR_3g082830 | 34.268 | 321 | 182 | 6 | 31 | 325 | 40 | 357 | 9.83e-60 | 196 |
| MS.gene80099.t1 | MTR_5g084750 | 35.144 | 313 | 174 | 7 | 31 | 317 | 32 | 341 | 6.50e-59 | 194 |
| MS.gene80099.t1 | MTR_3g005650 | 32.394 | 355 | 215 | 6 | 4 | 338 | 8 | 357 | 1.23e-58 | 193 |
| MS.gene80099.t1 | MTR_4g122200 | 34.663 | 326 | 189 | 4 | 31 | 332 | 37 | 362 | 4.51e-58 | 192 |
| MS.gene80099.t1 | MTR_5g074270 | 34.921 | 315 | 174 | 6 | 29 | 315 | 33 | 344 | 6.44e-57 | 189 |
| MS.gene80099.t1 | MTR_2g033930 | 34.412 | 340 | 190 | 7 | 24 | 336 | 28 | 361 | 3.50e-56 | 187 |
| MS.gene80099.t1 | MTR_5g084770 | 34.713 | 314 | 175 | 7 | 31 | 317 | 30 | 340 | 3.54e-56 | 186 |
| MS.gene80099.t1 | MTR_5g084790 | 31.214 | 346 | 207 | 7 | 2 | 320 | 5 | 346 | 8.82e-56 | 186 |
| MS.gene80099.t1 | MTR_3g464730 | 33.544 | 316 | 176 | 7 | 31 | 317 | 30 | 340 | 3.18e-55 | 184 |
| MS.gene80099.t1 | MTR_2g033920 | 32.773 | 357 | 214 | 5 | 4 | 336 | 12 | 366 | 1.26e-54 | 183 |
| MS.gene80099.t1 | MTR_4g035353 | 29.670 | 364 | 229 | 4 | 1 | 338 | 1 | 363 | 1.32e-54 | 183 |
| MS.gene80099.t1 | MTR_3g435540 | 33.529 | 340 | 194 | 8 | 8 | 320 | 3 | 337 | 6.84e-54 | 181 |
| MS.gene80099.t1 | MTR_0565s0010 | 32.653 | 343 | 203 | 6 | 22 | 338 | 25 | 365 | 1.11e-53 | 181 |
| MS.gene80099.t1 | MTR_8g075230 | 34.591 | 318 | 170 | 10 | 24 | 311 | 32 | 341 | 3.99e-53 | 179 |
| MS.gene80099.t1 | MTR_2g100620 | 33.754 | 317 | 180 | 7 | 31 | 320 | 33 | 346 | 1.01e-52 | 177 |
| MS.gene80099.t1 | MTR_5g022640 | 32.615 | 325 | 188 | 7 | 24 | 321 | 39 | 359 | 4.16e-52 | 176 |
| MS.gene80099.t1 | MTR_1g079570 | 55.396 | 139 | 62 | 0 | 201 | 339 | 4 | 142 | 9.29e-52 | 168 |
| MS.gene80099.t1 | MTR_4g087985 | 31.680 | 363 | 201 | 9 | 3 | 322 | 8 | 366 | 2.64e-51 | 174 |
| MS.gene80099.t1 | MTR_3g023220 | 33.136 | 338 | 192 | 8 | 21 | 336 | 26 | 351 | 4.21e-51 | 173 |
| MS.gene80099.t1 | MTR_1g025680 | 32.764 | 351 | 202 | 7 | 1 | 320 | 1 | 348 | 2.05e-50 | 174 |
| MS.gene80099.t1 | MTR_8g074570 | 30.854 | 363 | 202 | 10 | 7 | 332 | 16 | 366 | 3.13e-50 | 172 |
| MS.gene80099.t1 | MTR_2g084585 | 31.805 | 349 | 204 | 10 | 1 | 320 | 1 | 344 | 3.73e-50 | 171 |
| MS.gene80099.t1 | MTR_8g075220 | 33.333 | 324 | 178 | 11 | 31 | 321 | 42 | 360 | 3.74e-50 | 171 |
| MS.gene80099.t1 | MTR_8g014910 | 31.054 | 351 | 207 | 8 | 1 | 320 | 1 | 347 | 4.02e-50 | 171 |
| MS.gene80099.t1 | MTR_1g025760 | 31.940 | 335 | 185 | 9 | 25 | 328 | 77 | 399 | 4.06e-50 | 172 |
| MS.gene80099.t1 | MTR_5g022630 | 31.700 | 347 | 200 | 9 | 2 | 315 | 12 | 354 | 1.06e-49 | 170 |
| MS.gene80099.t1 | MTR_1g025780 | 32.102 | 352 | 200 | 10 | 1 | 320 | 9 | 353 | 2.20e-49 | 169 |
| MS.gene80099.t1 | MTR_3g052490 | 32.514 | 366 | 201 | 10 | 7 | 338 | 13 | 366 | 2.79e-49 | 169 |
| MS.gene80099.t1 | MTR_5g009100 | 31.420 | 331 | 201 | 7 | 31 | 336 | 48 | 377 | 1.39e-48 | 167 |
| MS.gene80099.t1 | MTR_4g108690 | 33.754 | 317 | 179 | 6 | 31 | 320 | 29 | 341 | 1.56e-48 | 167 |
| MS.gene80099.t1 | MTR_8g075200 | 31.875 | 320 | 183 | 11 | 31 | 321 | 43 | 356 | 3.33e-48 | 167 |
| MS.gene80099.t1 | MTR_5g093090 | 30.471 | 361 | 210 | 8 | 8 | 337 | 11 | 361 | 5.69e-48 | 166 |
| MS.gene80099.t1 | MTR_3g005660 | 32.239 | 335 | 200 | 7 | 30 | 338 | 37 | 370 | 8.83e-48 | 165 |
| MS.gene80099.t1 | MTR_1g025720 | 32.154 | 311 | 183 | 5 | 31 | 316 | 39 | 346 | 1.82e-47 | 164 |
| MS.gene80099.t1 | MTR_4g056280 | 31.322 | 348 | 207 | 8 | 1 | 320 | 1 | 344 | 5.35e-47 | 163 |
| MS.gene80099.t1 | MTR_8g087870 | 30.723 | 332 | 197 | 6 | 30 | 338 | 30 | 351 | 8.29e-47 | 162 |
| MS.gene80099.t1 | MTR_1g025700 | 32.203 | 354 | 196 | 9 | 5 | 320 | 16 | 363 | 9.30e-47 | 162 |
| MS.gene80099.t1 | MTR_2g044100 | 31.063 | 367 | 218 | 9 | 4 | 339 | 16 | 378 | 1.53e-45 | 160 |
| MS.gene80099.t1 | MTR_2g015080 | 30.791 | 354 | 189 | 11 | 4 | 311 | 9 | 352 | 1.68e-45 | 159 |
| MS.gene80099.t1 | MTR_3g052480 | 30.055 | 366 | 215 | 8 | 6 | 338 | 11 | 368 | 3.43e-45 | 158 |
| MS.gene80099.t1 | MTR_2g017925 | 31.778 | 343 | 196 | 8 | 19 | 336 | 24 | 353 | 6.75e-45 | 157 |
| MS.gene80099.t1 | MTR_5g078210 | 34.749 | 259 | 143 | 4 | 32 | 266 | 28 | 284 | 1.01e-43 | 153 |
| MS.gene80099.t1 | MTR_3g114120 | 30.892 | 314 | 185 | 6 | 30 | 316 | 48 | 356 | 1.46e-43 | 154 |
| MS.gene80099.t1 | MTR_3g114090 | 31.562 | 320 | 189 | 7 | 27 | 320 | 35 | 350 | 1.64e-43 | 154 |
| MS.gene80099.t1 | MTR_3g052580 | 29.167 | 360 | 215 | 8 | 7 | 336 | 10 | 359 | 5.86e-43 | 153 |
| MS.gene80099.t1 | MTR_3g052580 | 29.006 | 362 | 217 | 8 | 7 | 338 | 9 | 360 | 1.07e-42 | 152 |
| MS.gene80099.t1 | MTR_4g056160 | 29.683 | 347 | 209 | 8 | 5 | 321 | 4 | 345 | 1.37e-42 | 151 |
| MS.gene80099.t1 | MTR_2g017875 | 30.462 | 325 | 189 | 7 | 30 | 329 | 35 | 347 | 1.79e-41 | 148 |
| MS.gene80099.t1 | MTR_2g017965 | 31.858 | 339 | 186 | 8 | 30 | 336 | 34 | 359 | 2.81e-41 | 148 |
| MS.gene80099.t1 | MTR_8g031390 | 29.483 | 329 | 194 | 7 | 31 | 331 | 39 | 357 | 3.80e-40 | 145 |
| MS.gene80099.t1 | MTR_8g031420 | 29.377 | 337 | 195 | 9 | 31 | 336 | 37 | 361 | 6.51e-40 | 144 |
| MS.gene80099.t1 | MTR_2g017955 | 30.448 | 335 | 187 | 8 | 13 | 312 | 9 | 332 | 1.56e-39 | 144 |
| MS.gene80099.t1 | MTR_8g022790 | 28.829 | 333 | 204 | 7 | 30 | 338 | 38 | 361 | 4.72e-39 | 142 |
| MS.gene80099.t1 | MTR_8g022810 | 30.462 | 325 | 188 | 8 | 28 | 321 | 40 | 357 | 4.92e-39 | 142 |
| MS.gene80099.t1 | MTR_1g025910 | 29.697 | 330 | 199 | 5 | 34 | 336 | 41 | 364 | 7.31e-39 | 142 |
| MS.gene80099.t1 | MTR_8g074560 | 31.287 | 342 | 189 | 14 | 32 | 336 | 34 | 366 | 8.43e-39 | 141 |
| MS.gene80099.t1 | MTR_8g031430 | 28.783 | 337 | 197 | 10 | 31 | 336 | 39 | 363 | 2.39e-38 | 140 |
| MS.gene80099.t1 | MTR_5g083040 | 27.523 | 327 | 194 | 8 | 26 | 317 | 30 | 348 | 8.98e-38 | 139 |
| MS.gene80099.t1 | MTR_0009s0250 | 31.290 | 310 | 171 | 10 | 32 | 314 | 36 | 330 | 1.33e-37 | 138 |
| MS.gene80099.t1 | MTR_8g031400 | 27.596 | 337 | 201 | 8 | 31 | 336 | 39 | 363 | 1.75e-35 | 132 |
| MS.gene80099.t1 | MTR_2g033920 | 32.270 | 282 | 166 | 4 | 8 | 266 | 16 | 295 | 4.72e-35 | 130 |
| MS.gene80099.t1 | MTR_2g461580 | 27.027 | 333 | 203 | 7 | 32 | 339 | 34 | 351 | 1.30e-33 | 127 |
| MS.gene80099.t1 | MTR_3g021460 | 27.795 | 331 | 197 | 8 | 32 | 336 | 34 | 348 | 9.04e-32 | 122 |
| MS.gene80099.t1 | MTR_8g074580 | 26.667 | 405 | 214 | 10 | 7 | 337 | 23 | 418 | 1.12e-31 | 123 |
| MS.gene80099.t1 | MTR_2g017915 | 27.548 | 363 | 203 | 10 | 4 | 336 | 5 | 337 | 4.03e-31 | 120 |
| MS.gene80099.t1 | MTR_8g031390 | 29.032 | 279 | 165 | 6 | 31 | 286 | 39 | 307 | 2.14e-30 | 118 |
| MS.gene80099.t1 | MTR_2g017925 | 31.224 | 237 | 149 | 5 | 103 | 336 | 25 | 250 | 3.01e-30 | 116 |
| MS.gene80099.t1 | MTR_0127s0040 | 25.822 | 213 | 156 | 2 | 126 | 338 | 28 | 238 | 8.29e-28 | 108 |
| MS.gene80099.t1 | MTR_1108s0010 | 28.959 | 221 | 142 | 4 | 109 | 327 | 3 | 210 | 1.69e-26 | 105 |
| MS.gene80099.t1 | MTR_2g015580 | 26.685 | 371 | 217 | 14 | 10 | 335 | 28 | 388 | 9.73e-24 | 101 |
| MS.gene80099.t1 | MTR_1g030275 | 26.923 | 338 | 187 | 11 | 33 | 322 | 43 | 368 | 5.80e-23 | 98.6 |
| MS.gene80099.t1 | MTR_5g093090 | 27.586 | 290 | 169 | 8 | 8 | 266 | 11 | 290 | 7.64e-23 | 97.1 |
| MS.gene80099.t1 | MTR_8g089805 | 25.606 | 289 | 177 | 9 | 66 | 322 | 24 | 306 | 3.64e-22 | 95.5 |
| MS.gene80099.t1 | MTR_8g089805 | 25.606 | 289 | 177 | 9 | 66 | 322 | 92 | 374 | 4.14e-22 | 96.3 |
| MS.gene80099.t1 | MTR_1g030220 | 25.779 | 353 | 204 | 12 | 24 | 329 | 35 | 376 | 6.60e-22 | 95.9 |
| MS.gene80099.t1 | MTR_7g111780 | 27.988 | 343 | 197 | 13 | 22 | 329 | 29 | 356 | 1.61e-21 | 94.4 |
| MS.gene80099.t1 | MTR_5g087690 | 24.038 | 312 | 204 | 7 | 29 | 315 | 50 | 353 | 3.23e-21 | 93.6 |
| MS.gene80099.t1 | MTR_5g074210 | 33.813 | 139 | 90 | 1 | 181 | 317 | 64 | 202 | 4.40e-21 | 90.5 |
| MS.gene80099.t1 | MTR_7g111780 | 29.151 | 271 | 163 | 10 | 74 | 329 | 1 | 257 | 2.59e-20 | 89.4 |
| MS.gene80099.t1 | MTR_1g030268 | 25.401 | 374 | 219 | 14 | 3 | 329 | 14 | 374 | 2.91e-20 | 91.3 |
| MS.gene80099.t1 | MTR_1g030340 | 26.149 | 348 | 192 | 13 | 33 | 329 | 46 | 379 | 4.69e-20 | 90.5 |
| MS.gene80099.t1 | MTR_5g016030 | 58.209 | 67 | 28 | 0 | 223 | 289 | 7 | 73 | 6.41e-20 | 83.2 |
| MS.gene80099.t1 | MTR_7g087190 | 24.419 | 344 | 196 | 10 | 33 | 323 | 47 | 379 | 7.46e-20 | 90.1 |
| MS.gene80099.t1 | MTR_2g087292 | 25.965 | 285 | 150 | 8 | 32 | 314 | 36 | 261 | 1.02e-19 | 88.2 |
| MS.gene80099.t1 | MTR_1g030265 | 26.441 | 295 | 174 | 11 | 67 | 329 | 58 | 341 | 2.65e-19 | 87.8 |
| MS.gene80099.t1 | MTR_6g007100 | 25.776 | 322 | 199 | 8 | 33 | 323 | 37 | 349 | 4.42e-19 | 87.4 |
| MS.gene80099.t1 | MTR_8g028160 | 24.779 | 339 | 199 | 11 | 33 | 323 | 40 | 370 | 1.67e-18 | 85.9 |
| MS.gene80099.t1 | MTR_8g022810 | 28.856 | 201 | 111 | 6 | 28 | 203 | 40 | 233 | 3.31e-18 | 84.3 |
| MS.gene80099.t1 | MTR_2g018015 | 29.825 | 228 | 133 | 5 | 19 | 219 | 24 | 251 | 3.56e-18 | 84.0 |
| MS.gene80099.t1 | MTR_8g038680 | 27.083 | 336 | 193 | 12 | 33 | 323 | 32 | 360 | 5.81e-18 | 84.3 |
| MS.gene80099.t1 | MTR_1g082390 | 24.654 | 361 | 211 | 12 | 8 | 321 | 15 | 361 | 1.79e-17 | 82.8 |
| MS.gene80099.t1 | MTR_6g007095 | 26.071 | 280 | 178 | 9 | 61 | 323 | 417 | 684 | 2.70e-17 | 83.6 |
| MS.gene80099.t1 | MTR_6g007095 | 27.682 | 289 | 175 | 9 | 61 | 323 | 88 | 368 | 3.69e-17 | 82.8 |
| MS.gene80099.t1 | MTR_7g116870 | 22.792 | 351 | 215 | 9 | 24 | 329 | 28 | 367 | 1.03e-16 | 80.9 |
| MS.gene80099.t1 | MTR_2g015630 | 25.301 | 332 | 199 | 12 | 34 | 322 | 36 | 361 | 2.69e-16 | 79.7 |
| MS.gene80099.t1 | MTR_7g113860 | 24.458 | 323 | 187 | 9 | 55 | 329 | 59 | 372 | 8.63e-16 | 78.2 |
| MS.gene80099.t1 | MTR_7g113860 | 24.727 | 275 | 171 | 7 | 82 | 329 | 33 | 298 | 1.52e-15 | 76.6 |
| MS.gene80099.t1 | MTR_7g113860 | 24.727 | 275 | 171 | 7 | 82 | 329 | 101 | 366 | 2.11e-15 | 77.0 |
| MS.gene80099.t1 | MTR_1g030230 | 23.129 | 294 | 185 | 9 | 67 | 329 | 85 | 368 | 2.20e-15 | 76.6 |
| MS.gene80099.t1 | MTR_6g007090 | 25.982 | 331 | 198 | 10 | 33 | 323 | 43 | 366 | 2.38e-15 | 76.6 |
| MS.gene80099.t1 | MTR_2g015650 | 26.286 | 350 | 190 | 15 | 26 | 322 | 25 | 359 | 3.67e-15 | 76.3 |
| MS.gene80099.t1 | MTR_6g081170 | 50.602 | 83 | 21 | 2 | 37 | 99 | 1 | 83 | 7.83e-15 | 70.1 |
| MS.gene80099.t1 | MTR_2g017895 | 25.869 | 259 | 164 | 6 | 59 | 315 | 10 | 242 | 8.46e-15 | 73.9 |
| MS.gene80099.t1 | MTR_7g033155 | 23.841 | 302 | 179 | 10 | 67 | 323 | 91 | 386 | 2.14e-14 | 73.9 |
| MS.gene80099.t1 | MTR_3g463960 | 23.754 | 341 | 206 | 12 | 33 | 329 | 48 | 378 | 2.40e-14 | 73.9 |
| MS.gene80099.t1 | MTR_3g463950 | 23.754 | 341 | 206 | 12 | 33 | 329 | 48 | 378 | 2.40e-14 | 73.9 |
| MS.gene80099.t1 | MTR_3g463970 | 23.754 | 341 | 206 | 12 | 33 | 329 | 48 | 378 | 2.40e-14 | 73.9 |
| MS.gene80099.t1 | MTR_3g463940 | 23.754 | 341 | 206 | 12 | 33 | 329 | 48 | 378 | 2.40e-14 | 73.9 |
| MS.gene80099.t1 | MTR_4g036375 | 28.342 | 187 | 106 | 5 | 1 | 161 | 1 | 185 | 2.67e-14 | 70.9 |
| MS.gene80099.t1 | MTR_1g060500 | 22.523 | 333 | 195 | 12 | 28 | 319 | 39 | 349 | 4.46e-13 | 69.7 |
| MS.gene80099.t1 | MTR_1g060490 | 21.672 | 323 | 202 | 12 | 28 | 319 | 36 | 338 | 1.09e-12 | 68.6 |
| MS.gene80099.t1 | MTR_3g463930 | 23.988 | 346 | 206 | 12 | 33 | 329 | 48 | 385 | 1.14e-12 | 68.9 |
| MS.gene80099.t1 | MTR_5g084880 | 31.532 | 111 | 75 | 1 | 157 | 266 | 2 | 112 | 1.48e-12 | 64.7 |
| MS.gene80099.t1 | MTR_5g093090 | 30.178 | 169 | 84 | 5 | 8 | 146 | 11 | 175 | 3.96e-12 | 65.1 |
| MS.gene80099.t1 | MTR_3g069780 | 23.145 | 337 | 206 | 13 | 33 | 326 | 34 | 360 | 4.25e-12 | 67.0 |
| MS.gene80099.t1 | MTR_7g116480 | 58.730 | 63 | 20 | 3 | 30 | 90 | 15 | 73 | 4.56e-12 | 63.5 |
| MS.gene80099.t1 | MTR_1g092690 | 23.492 | 315 | 181 | 13 | 30 | 309 | 52 | 341 | 5.80e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80099.t1 | AT5G33370 | 64.327 | 342 | 99 | 1 | 24 | 342 | 25 | 366 | 6.66e-164 | 462 |
| MS.gene80099.t1 | AT3G04290 | 60.882 | 363 | 115 | 2 | 2 | 341 | 6 | 364 | 1.60e-161 | 456 |
| MS.gene80099.t1 | AT5G18430 | 60.822 | 365 | 111 | 5 | 1 | 338 | 3 | 362 | 4.46e-157 | 444 |
| MS.gene80099.t1 | AT4G28780 | 62.018 | 337 | 103 | 3 | 28 | 340 | 30 | 365 | 3.62e-152 | 432 |
| MS.gene80099.t1 | AT5G33370 | 62.782 | 266 | 76 | 1 | 24 | 266 | 25 | 290 | 2.27e-117 | 342 |
| MS.gene80099.t1 | AT2G23540 | 35.714 | 336 | 184 | 7 | 31 | 335 | 50 | 384 | 1.62e-64 | 209 |
| MS.gene80099.t1 | AT3G50400 | 37.425 | 334 | 176 | 9 | 31 | 332 | 36 | 368 | 2.22e-64 | 208 |
| MS.gene80099.t1 | AT5G37690 | 38.361 | 305 | 169 | 5 | 32 | 320 | 30 | 331 | 6.84e-64 | 206 |
| MS.gene80099.t1 | AT5G37690 | 37.380 | 313 | 169 | 5 | 32 | 320 | 30 | 339 | 1.64e-62 | 203 |
| MS.gene80099.t1 | AT1G71691 | 34.441 | 331 | 194 | 5 | 30 | 339 | 56 | 384 | 3.98e-60 | 198 |
| MS.gene80099.t1 | AT2G04570 | 33.428 | 353 | 197 | 10 | 1 | 323 | 1 | 345 | 1.24e-59 | 196 |
| MS.gene80099.t1 | AT2G42990 | 34.375 | 320 | 181 | 6 | 31 | 324 | 30 | 346 | 3.36e-59 | 194 |
| MS.gene80099.t1 | AT5G15720 | 34.132 | 334 | 195 | 4 | 30 | 338 | 31 | 364 | 7.16e-59 | 194 |
| MS.gene80099.t1 | AT5G42170 | 33.754 | 317 | 178 | 6 | 30 | 320 | 51 | 361 | 2.09e-57 | 190 |
| MS.gene80099.t1 | AT5G03820 | 34.795 | 342 | 189 | 7 | 10 | 320 | 11 | 349 | 7.68e-57 | 188 |
| MS.gene80099.t1 | AT5G03810 | 34.911 | 338 | 187 | 7 | 13 | 320 | 11 | 345 | 1.73e-56 | 187 |
| MS.gene80099.t1 | AT5G03820 | 34.795 | 342 | 189 | 7 | 10 | 320 | 39 | 377 | 1.85e-56 | 188 |
| MS.gene80099.t1 | AT5G08460 | 33.146 | 356 | 210 | 6 | 7 | 335 | 28 | 382 | 7.47e-56 | 187 |
| MS.gene80099.t1 | AT1G29660 | 33.051 | 354 | 212 | 5 | 9 | 338 | 12 | 364 | 1.06e-55 | 186 |
| MS.gene80099.t1 | AT4G26790 | 32.911 | 316 | 183 | 6 | 31 | 320 | 31 | 343 | 1.24e-55 | 185 |
| MS.gene80099.t1 | AT4G26790 | 32.911 | 316 | 183 | 6 | 31 | 320 | 31 | 343 | 1.24e-55 | 185 |
| MS.gene80099.t1 | AT5G45670 | 32.840 | 338 | 204 | 4 | 1 | 315 | 1 | 338 | 2.23e-55 | 185 |
| MS.gene80099.t1 | AT1G75880 | 32.295 | 353 | 204 | 6 | 2 | 321 | 18 | 368 | 3.10e-55 | 185 |
| MS.gene80099.t1 | AT1G71250 | 30.973 | 339 | 209 | 3 | 24 | 338 | 36 | 373 | 3.78e-55 | 184 |
| MS.gene80099.t1 | AT1G75890 | 34.579 | 321 | 175 | 9 | 24 | 315 | 43 | 357 | 7.40e-55 | 184 |
| MS.gene80099.t1 | AT1G75890 | 34.579 | 321 | 175 | 9 | 24 | 315 | 72 | 386 | 8.87e-55 | 184 |
| MS.gene80099.t1 | AT1G75880 | 32.295 | 353 | 203 | 7 | 2 | 321 | 18 | 367 | 3.01e-54 | 182 |
| MS.gene80099.t1 | AT1G29670 | 33.333 | 339 | 200 | 5 | 24 | 338 | 27 | 363 | 3.18e-54 | 182 |
| MS.gene80099.t1 | AT4G18970 | 34.951 | 309 | 178 | 4 | 30 | 315 | 29 | 337 | 1.24e-53 | 180 |
| MS.gene80099.t1 | AT1G33811 | 34.302 | 344 | 195 | 8 | 24 | 338 | 29 | 370 | 1.43e-53 | 180 |
| MS.gene80099.t1 | AT1G29670 | 33.333 | 339 | 200 | 5 | 24 | 338 | 95 | 431 | 2.15e-53 | 181 |
| MS.gene80099.t1 | AT3G16370 | 34.069 | 317 | 179 | 7 | 31 | 320 | 32 | 345 | 2.36e-53 | 179 |
| MS.gene80099.t1 | AT4G18970 | 34.951 | 309 | 178 | 4 | 30 | 315 | 29 | 337 | 5.42e-53 | 180 |
| MS.gene80099.t1 | AT2G31540 | 34.069 | 317 | 174 | 6 | 31 | 317 | 37 | 348 | 1.31e-52 | 177 |
| MS.gene80099.t1 | AT1G75890 | 32.831 | 332 | 179 | 9 | 24 | 315 | 43 | 370 | 1.71e-52 | 178 |
| MS.gene80099.t1 | AT1G71691 | 34.783 | 276 | 176 | 4 | 65 | 339 | 11 | 283 | 3.01e-52 | 174 |
| MS.gene80099.t1 | AT3G53100 | 33.333 | 345 | 197 | 9 | 12 | 328 | 12 | 351 | 4.60e-52 | 176 |
| MS.gene80099.t1 | AT1G74460 | 33.929 | 336 | 193 | 7 | 7 | 317 | 3 | 334 | 2.91e-51 | 174 |
| MS.gene80099.t1 | AT2G24560 | 32.362 | 309 | 174 | 7 | 31 | 309 | 36 | 339 | 1.40e-50 | 172 |
| MS.gene80099.t1 | AT2G30220 | 32.110 | 327 | 187 | 6 | 31 | 327 | 35 | 356 | 3.36e-50 | 171 |
| MS.gene80099.t1 | AT1G58430 | 31.790 | 324 | 192 | 6 | 31 | 327 | 37 | 358 | 3.46e-50 | 171 |
| MS.gene80099.t1 | AT1G06990 | 31.629 | 313 | 184 | 5 | 30 | 315 | 38 | 347 | 9.46e-50 | 170 |
| MS.gene80099.t1 | AT5G22810 | 32.915 | 319 | 182 | 7 | 31 | 320 | 36 | 351 | 1.47e-49 | 169 |
| MS.gene80099.t1 | AT2G30310 | 32.177 | 317 | 180 | 6 | 31 | 317 | 36 | 347 | 9.39e-49 | 167 |
| MS.gene80099.t1 | AT1G75900 | 32.177 | 317 | 177 | 8 | 31 | 317 | 45 | 353 | 2.71e-48 | 166 |
| MS.gene80099.t1 | AT5G41890 | 30.319 | 376 | 204 | 10 | 2 | 332 | 7 | 369 | 2.92e-48 | 167 |
| MS.gene80099.t1 | AT5G15720 | 32.979 | 282 | 185 | 3 | 61 | 338 | 52 | 333 | 3.47e-48 | 165 |
| MS.gene80099.t1 | AT3G14820 | 31.250 | 336 | 190 | 9 | 23 | 328 | 26 | 350 | 3.60e-48 | 166 |
| MS.gene80099.t1 | AT1G59406 | 31.232 | 349 | 204 | 8 | 7 | 326 | 8 | 349 | 4.33e-48 | 166 |
| MS.gene80099.t1 | AT1G59030 | 31.232 | 349 | 204 | 8 | 7 | 326 | 8 | 349 | 4.33e-48 | 166 |
| MS.gene80099.t1 | AT1G58725 | 31.232 | 349 | 204 | 8 | 7 | 326 | 8 | 349 | 4.33e-48 | 166 |
| MS.gene80099.t1 | AT5G45950 | 31.790 | 324 | 189 | 9 | 29 | 327 | 40 | 356 | 2.21e-47 | 164 |
| MS.gene80099.t1 | AT1G20120 | 30.868 | 311 | 186 | 6 | 31 | 315 | 80 | 387 | 1.32e-46 | 163 |
| MS.gene80099.t1 | AT2G40250 | 29.430 | 316 | 188 | 5 | 33 | 317 | 40 | 351 | 2.25e-46 | 161 |
| MS.gene80099.t1 | AT1G58520 | 31.940 | 335 | 185 | 9 | 21 | 326 | 22 | 342 | 6.31e-46 | 159 |
| MS.gene80099.t1 | AT1G58525 | 31.940 | 335 | 185 | 9 | 21 | 326 | 22 | 342 | 6.31e-46 | 159 |
| MS.gene80099.t1 | AT5G45960 | 31.949 | 313 | 176 | 7 | 31 | 311 | 49 | 356 | 1.01e-45 | 160 |
| MS.gene80099.t1 | AT2G19060 | 30.938 | 320 | 180 | 10 | 30 | 322 | 31 | 336 | 7.75e-45 | 157 |
| MS.gene80099.t1 | AT3G43570 | 29.360 | 344 | 182 | 9 | 10 | 326 | 11 | 320 | 1.43e-43 | 153 |
| MS.gene80099.t1 | AT1G20132 | 29.560 | 318 | 194 | 7 | 24 | 315 | 57 | 370 | 1.86e-43 | 154 |
| MS.gene80099.t1 | AT2G19010 | 29.714 | 350 | 205 | 10 | 3 | 326 | 6 | 340 | 2.83e-43 | 153 |
| MS.gene80099.t1 | AT2G19050 | 29.747 | 316 | 187 | 6 | 30 | 322 | 32 | 335 | 3.73e-43 | 152 |
| MS.gene80099.t1 | AT2G19010 | 30.960 | 323 | 184 | 9 | 30 | 326 | 61 | 370 | 7.57e-43 | 152 |
| MS.gene80099.t1 | AT4G10950 | 29.787 | 329 | 207 | 7 | 30 | 336 | 72 | 398 | 8.00e-43 | 153 |
| MS.gene80099.t1 | AT1G20135 | 31.231 | 333 | 187 | 9 | 12 | 316 | 9 | 327 | 1.45e-42 | 150 |
| MS.gene80099.t1 | AT5G40990 | 30.523 | 344 | 198 | 8 | 30 | 339 | 38 | 374 | 2.44e-42 | 151 |
| MS.gene80099.t1 | AT4G10950 | 29.429 | 333 | 207 | 7 | 30 | 336 | 72 | 402 | 3.65e-42 | 151 |
| MS.gene80099.t1 | AT1G53990 | 30.473 | 338 | 201 | 8 | 31 | 341 | 37 | 367 | 1.57e-41 | 149 |
| MS.gene80099.t1 | AT4G30140 | 30.769 | 338 | 195 | 9 | 21 | 336 | 27 | 347 | 2.57e-40 | 145 |
| MS.gene80099.t1 | AT1G53940 | 31.304 | 345 | 192 | 10 | 31 | 339 | 41 | 376 | 8.53e-40 | 144 |
| MS.gene80099.t1 | AT5G55050 | 28.994 | 338 | 204 | 8 | 32 | 337 | 42 | 375 | 1.79e-39 | 143 |
| MS.gene80099.t1 | AT1G20130 | 30.887 | 327 | 185 | 10 | 24 | 315 | 180 | 500 | 6.19e-39 | 144 |
| MS.gene80099.t1 | AT1G20130 | 30.887 | 327 | 185 | 10 | 24 | 315 | 200 | 520 | 6.60e-39 | 145 |
| MS.gene80099.t1 | AT3G14225 | 28.857 | 350 | 192 | 9 | 31 | 338 | 39 | 373 | 7.39e-38 | 139 |
| MS.gene80099.t1 | AT1G53920 | 27.855 | 359 | 212 | 9 | 3 | 322 | 14 | 364 | 7.72e-38 | 139 |
| MS.gene80099.t1 | AT3G14225 | 28.779 | 344 | 204 | 8 | 31 | 338 | 39 | 377 | 9.63e-38 | 139 |
| MS.gene80099.t1 | AT1G71691 | 34.109 | 258 | 147 | 5 | 30 | 266 | 56 | 311 | 1.00e-37 | 137 |
| MS.gene80099.t1 | AT5G15720 | 32.707 | 266 | 154 | 4 | 30 | 270 | 31 | 296 | 1.20e-37 | 137 |
| MS.gene80099.t1 | AT1G73610 | 30.699 | 329 | 186 | 8 | 25 | 327 | 31 | 343 | 1.51e-37 | 137 |
| MS.gene80099.t1 | AT2G31550 | 33.019 | 212 | 133 | 3 | 113 | 319 | 2 | 209 | 3.55e-37 | 133 |
| MS.gene80099.t1 | AT2G24560 | 30.741 | 270 | 152 | 7 | 31 | 270 | 36 | 300 | 8.58e-37 | 135 |
| MS.gene80099.t1 | AT4G16230 | 38.009 | 221 | 109 | 5 | 12 | 205 | 10 | 229 | 1.91e-36 | 132 |
| MS.gene80099.t1 | AT5G63170 | 30.519 | 308 | 171 | 9 | 31 | 311 | 30 | 321 | 4.84e-36 | 133 |
| MS.gene80099.t1 | AT1G71120 | 30.383 | 339 | 194 | 12 | 24 | 332 | 26 | 352 | 1.24e-35 | 133 |
| MS.gene80099.t1 | AT2G19050 | 30.435 | 253 | 147 | 4 | 30 | 259 | 32 | 278 | 1.51e-33 | 125 |
| MS.gene80099.t1 | AT1G75920 | 28.933 | 356 | 190 | 12 | 10 | 322 | 6 | 341 | 3.74e-33 | 125 |
| MS.gene80099.t1 | AT1G75920 | 29.179 | 329 | 193 | 11 | 10 | 322 | 6 | 310 | 4.88e-31 | 119 |
| MS.gene80099.t1 | AT3G43550 | 30.258 | 271 | 156 | 6 | 22 | 266 | 23 | 286 | 5.21e-31 | 119 |
| MS.gene80099.t1 | AT1G75920 | 27.763 | 371 | 190 | 12 | 10 | 322 | 1 | 351 | 6.39e-31 | 120 |
| MS.gene80099.t1 | AT1G23500 | 30.120 | 332 | 188 | 9 | 20 | 324 | 27 | 341 | 1.14e-30 | 119 |
| MS.gene80099.t1 | AT1G75910 | 28.857 | 350 | 194 | 11 | 12 | 322 | 8 | 341 | 2.22e-30 | 118 |
| MS.gene80099.t1 | AT2G03980 | 28.571 | 315 | 186 | 10 | 30 | 314 | 44 | 349 | 7.21e-30 | 117 |
| MS.gene80099.t1 | AT2G03980 | 28.571 | 315 | 186 | 10 | 30 | 314 | 44 | 349 | 7.21e-30 | 117 |
| MS.gene80099.t1 | AT2G03980 | 28.571 | 315 | 186 | 10 | 30 | 314 | 44 | 349 | 7.21e-30 | 117 |
| MS.gene80099.t1 | AT2G03980 | 28.571 | 315 | 186 | 10 | 30 | 314 | 44 | 349 | 7.21e-30 | 117 |
| MS.gene80099.t1 | AT1G75930 | 29.070 | 344 | 197 | 12 | 10 | 320 | 6 | 335 | 1.64e-28 | 113 |
| MS.gene80099.t1 | AT1G56670 | 29.537 | 281 | 167 | 8 | 59 | 321 | 90 | 357 | 4.08e-25 | 104 |
| MS.gene80099.t1 | AT1G75920 | 28.571 | 280 | 164 | 10 | 59 | 322 | 54 | 313 | 2.19e-23 | 99.0 |
| MS.gene80099.t1 | AT1G53940 | 29.368 | 269 | 151 | 9 | 31 | 269 | 41 | 300 | 3.03e-21 | 92.8 |
| MS.gene80099.t1 | AT1G54030 | 25.602 | 332 | 207 | 11 | 28 | 338 | 51 | 363 | 8.44e-21 | 93.2 |
| MS.gene80099.t1 | AT1G09390 | 27.500 | 280 | 174 | 7 | 59 | 321 | 87 | 354 | 2.25e-20 | 91.3 |
| MS.gene80099.t1 | AT1G54790 | 26.453 | 344 | 196 | 11 | 33 | 329 | 36 | 369 | 3.10e-20 | 90.9 |
| MS.gene80099.t1 | AT5G45910 | 26.822 | 343 | 186 | 15 | 33 | 322 | 34 | 364 | 3.75e-20 | 90.5 |
| MS.gene80099.t1 | AT3G14220 | 24.370 | 357 | 206 | 13 | 23 | 341 | 26 | 356 | 6.52e-20 | 89.7 |
| MS.gene80099.t1 | AT1G67830 | 26.667 | 345 | 191 | 13 | 33 | 325 | 34 | 368 | 1.63e-19 | 89.0 |
| MS.gene80099.t1 | AT1G54790 | 26.250 | 320 | 198 | 10 | 40 | 329 | 57 | 368 | 3.85e-19 | 87.8 |
| MS.gene80099.t1 | AT4G16233 | 32.540 | 126 | 84 | 1 | 214 | 338 | 5 | 130 | 8.90e-19 | 82.0 |
| MS.gene80099.t1 | AT3G27950 | 26.190 | 336 | 190 | 10 | 33 | 323 | 36 | 358 | 1.13e-18 | 86.7 |
| MS.gene80099.t1 | AT2G04020 | 28.319 | 226 | 122 | 6 | 30 | 223 | 44 | 261 | 1.58e-18 | 84.3 |
| MS.gene80099.t1 | AT2G04020 | 24.759 | 311 | 157 | 10 | 30 | 312 | 44 | 305 | 7.86e-18 | 83.6 |
| MS.gene80099.t1 | AT1G28610 | 25.269 | 372 | 215 | 15 | 1 | 322 | 1 | 359 | 2.56e-17 | 82.4 |
| MS.gene80099.t1 | AT5G03610 | 22.881 | 354 | 201 | 13 | 7 | 310 | 8 | 339 | 4.82e-17 | 81.6 |
| MS.gene80099.t1 | AT4G01130 | 24.798 | 371 | 217 | 13 | 8 | 326 | 11 | 371 | 6.12e-17 | 81.6 |
| MS.gene80099.t1 | AT3G09930 | 24.850 | 334 | 197 | 14 | 27 | 325 | 37 | 351 | 8.43e-17 | 80.9 |
| MS.gene80099.t1 | AT3G09930 | 24.850 | 334 | 197 | 14 | 27 | 325 | 37 | 351 | 8.43e-17 | 80.9 |
| MS.gene80099.t1 | AT3G26430 | 24.012 | 329 | 211 | 9 | 33 | 329 | 49 | 370 | 1.13e-16 | 80.5 |
| MS.gene80099.t1 | AT4G01130 | 26.712 | 292 | 175 | 10 | 67 | 326 | 1 | 285 | 1.66e-16 | 79.3 |
| MS.gene80099.t1 | AT3G05180 | 24.648 | 284 | 178 | 8 | 68 | 322 | 92 | 368 | 3.63e-16 | 79.3 |
| MS.gene80099.t1 | AT1G28570 | 24.416 | 385 | 231 | 17 | 1 | 335 | 1 | 375 | 4.77e-16 | 79.0 |
| MS.gene80099.t1 | AT3G62280 | 25.540 | 278 | 177 | 8 | 64 | 326 | 94 | 356 | 1.13e-15 | 77.8 |
| MS.gene80099.t1 | AT1G31550 | 25.381 | 394 | 223 | 17 | 1 | 338 | 1 | 379 | 2.58e-15 | 76.6 |
| MS.gene80099.t1 | AT1G54790 | 25.723 | 346 | 193 | 14 | 40 | 329 | 57 | 394 | 2.65e-15 | 76.6 |
| MS.gene80099.t1 | AT1G28590 | 25.344 | 363 | 207 | 14 | 28 | 334 | 35 | 389 | 1.33e-14 | 74.7 |
| MS.gene80099.t1 | AT1G28650 | 25.000 | 368 | 222 | 15 | 1 | 322 | 7 | 366 | 4.61e-14 | 72.8 |
| MS.gene80099.t1 | AT1G56670 | 28.959 | 221 | 131 | 7 | 59 | 266 | 90 | 297 | 6.36e-14 | 71.6 |
| MS.gene80099.t1 | AT1G28580 | 25.496 | 353 | 204 | 17 | 28 | 333 | 36 | 376 | 8.20e-14 | 72.4 |
| MS.gene80099.t1 | AT1G28660 | 26.005 | 373 | 211 | 18 | 4 | 325 | 9 | 367 | 3.32e-13 | 70.5 |
| MS.gene80099.t1 | AT1G28660 | 26.273 | 373 | 209 | 18 | 4 | 325 | 9 | 366 | 5.15e-13 | 69.7 |
| MS.gene80099.t1 | AT1G54010 | 23.547 | 344 | 207 | 12 | 31 | 340 | 38 | 359 | 2.21e-12 | 67.8 |
| MS.gene80099.t1 | AT1G54000 | 23.145 | 337 | 207 | 12 | 31 | 335 | 38 | 354 | 2.42e-12 | 67.8 |
| MS.gene80099.t1 | AT1G54030 | 26.496 | 234 | 136 | 9 | 28 | 241 | 51 | 268 | 1.87e-11 | 64.7 |
| MS.gene80099.t1 | AT4G16220 | 41.463 | 123 | 43 | 5 | 1 | 97 | 1 | 120 | 2.72e-11 | 63.5 |
| MS.gene80099.t1 | AT1G28580 | 25.641 | 273 | 173 | 12 | 82 | 333 | 32 | 295 | 5.04e-11 | 63.2 |
Find 55 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGAGACGTGTATGCATTT+TGG | 0.247136 | 6.1:-5006045 | MS.gene80099:CDS |
| AATTCCAGCTGAAGCAAAAT+TGG | 0.255973 | 6.1:+5007887 | None:intergenic |
| CAACTTGAAAACATGCTTCT+AGG | 0.266917 | 6.1:-5006543 | MS.gene80099:CDS |
| GTTACAGAAACTATATGATT+TGG | 0.274074 | 6.1:-5006691 | MS.gene80099:intron |
| CCAAGAACATTCTTAGTGTT+TGG | 0.281405 | 6.1:-5008743 | MS.gene80099:CDS |
| CCAAACACTAAGAATGTTCT+TGG | 0.305388 | 6.1:+5008743 | None:intergenic |
| ATAAGATACTTGACATATTC+AGG | 0.311449 | 6.1:+5007332 | None:intergenic |
| GGAGATTCACTTGTTGATAA+TGG | 0.312652 | 6.1:-5008722 | MS.gene80099:CDS |
| TGACGAGACCTTGCAGAATA+AGG | 0.321945 | 6.1:+5007365 | None:intergenic |
| TGATATTATGTCTGGCTCTA+AGG | 0.324308 | 6.1:-5005978 | MS.gene80099:CDS |
| CTTAATTCAGGGCTTAAGTA+TGG | 0.326158 | 6.1:+5007933 | None:intergenic |
| AGTAGGTTAAGTGCTCTTAT+TGG | 0.359500 | 6.1:-5007476 | MS.gene80099:CDS |
| AAGATAGTGCTAAGATTCAT+TGG | 0.366536 | 6.1:+5005944 | None:intergenic |
| ACATGCTTCTAGGACTTAAC+AGG | 0.380135 | 6.1:-5006533 | MS.gene80099:CDS |
| TTACAGAAACTATATGATTT+GGG | 0.387755 | 6.1:-5006690 | MS.gene80099:intron |
| AGAGTTCTTGTGACAGGAAC+AGG | 0.398532 | 6.1:-5006660 | MS.gene80099:CDS |
| CATAATCCAATACCATTGTT+AGG | 0.403360 | 6.1:+5006094 | None:intergenic |
| ATTGCTCAACGTGGTAGAAA+TGG | 0.412791 | 6.1:-5006612 | MS.gene80099:CDS |
| AGAGGAGAAAAGCTTCTAGT+TGG | 0.427534 | 6.1:-5007912 | MS.gene80099:CDS |
| ATTGTGAATGATATTATGTC+TGG | 0.429709 | 6.1:-5005986 | MS.gene80099:CDS |
| TAAGAGCACTTAACCTACTT+TGG | 0.431627 | 6.1:+5007480 | None:intergenic |
| CAAGGACCTAACAATGGTAT+TGG | 0.445856 | 6.1:-5006100 | MS.gene80099:CDS |
| TACTTAAGCCCTGAATTAAG+AGG | 0.450132 | 6.1:-5007930 | MS.gene80099:CDS |
| GTTGATAATCAATACCATAA+GGG | 0.451249 | 6.1:+5008657 | None:intergenic |
| TAATGGAAATAACAATTACT+TGG | 0.456317 | 6.1:-5008705 | MS.gene80099:CDS |
| GACTTAACAGGAAACTTGGC+AGG | 0.465462 | 6.1:-5006521 | MS.gene80099:CDS |
| CTAGGACTTAACAGGAAACT+TGG | 0.469763 | 6.1:-5006525 | MS.gene80099:CDS |
| TGTGACAGGAACAGGACCTA+TGG | 0.476833 | 6.1:-5006652 | MS.gene80099:CDS |
| ATTAATAATCCCGGTCAATA+CGG | 0.480874 | 6.1:-5006453 | MS.gene80099:intron |
| TCTTAGCACTATCTTAGCAT+TGG | 0.484703 | 6.1:-5005936 | MS.gene80099:CDS |
| TGCATTCCATCCATCTGAAA+AGG | 0.494067 | 6.1:-5006020 | MS.gene80099:CDS |
| CTTAACTTTATTAATAATCC+CGG | 0.500065 | 6.1:-5006462 | MS.gene80099:CDS |
| GGGCTTAAGTATGGCAATGT+TGG | 0.506421 | 6.1:+5007942 | None:intergenic |
| GTCTCTATTTGAGCACAAGT+TGG | 0.508907 | 6.1:+5006060 | None:intergenic |
| CACAAAATCATTGCCACCAA+CGG | 0.525761 | 6.1:+5007406 | None:intergenic |
| AGCGTGATTACCGTATTGAC+CGG | 0.526253 | 6.1:+5006443 | None:intergenic |
| CTTGTTCTCATAACCGTTGG+TGG | 0.534126 | 6.1:-5007419 | MS.gene80099:CDS |
| GTGACAGGAACAGGACCTAT+GGG | 0.546023 | 6.1:-5006651 | MS.gene80099:CDS |
| GCTAGAAGAGTTCTTGTGAC+AGG | 0.550959 | 6.1:-5006666 | MS.gene80099:CDS |
| AAAATAGCTTGTTGTGGACA+AGG | 0.552118 | 6.1:-5006118 | MS.gene80099:CDS |
| TTGATAATCAATACCATAAG+GGG | 0.553672 | 6.1:+5008658 | None:intergenic |
| ATTGGAATACTCAATGACAC+TGG | 0.571915 | 6.1:-5007867 | MS.gene80099:CDS |
| ACTTGGTGCCTTATTCTGCA+AGG | 0.583391 | 6.1:-5007373 | MS.gene80099:CDS |
| ACATCTAAAATAGCTTGTTG+TGG | 0.584171 | 6.1:-5006124 | MS.gene80099:CDS |
| GCACTTGTTCTCATAACCGT+TGG | 0.594141 | 6.1:-5007422 | MS.gene80099:CDS |
| GGGTGCATCAGCACGTGCAG+TGG | 0.594910 | 6.1:+5008679 | None:intergenic |
| CCACGTTGAGCAATTTCTGA+AGG | 0.597567 | 6.1:+5006621 | None:intergenic |
| TCTGAAGGAACACAGCCCAT+AGG | 0.624000 | 6.1:+5006636 | None:intergenic |
| GCTCTATCTTCGAATTCATG+TGG | 0.626387 | 6.1:+5005907 | None:intergenic |
| TTGGAATACTCAATGACACT+GGG | 0.640433 | 6.1:-5007866 | MS.gene80099:CDS |
| GCGTGATTACCGTATTGACC+GGG | 0.646524 | 6.1:+5006444 | None:intergenic |
| ACTTAACAGGAAACTTGGCA+GGG | 0.673315 | 6.1:-5006520 | MS.gene80099:CDS |
| CCTTCAGAAATTGCTCAACG+TGG | 0.676704 | 6.1:-5006621 | MS.gene80099:CDS |
| TGATAATCAATACCATAAGG+GGG | 0.707998 | 6.1:+5008659 | None:intergenic |
| TGTGGACAAGGACCTAACAA+TGG | 0.712232 | 6.1:-5006106 | MS.gene80099:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAAAATAAATAAAAAA+TGG | - | chr6.1:5007011-5007030 | MS.gene80099:intron | 0.0% |
| !! | TAAAACATATATTATTTGTT+TGG | - | chr6.1:5007626-5007645 | MS.gene80099:intron | 10.0% |
| !! | TATTAAGTAAAAATTAAAAC+CGG | - | chr6.1:5006409-5006428 | MS.gene80099:intron | 10.0% |
| !!! | AAATGGTTTAAATATATTTT+AGG | - | chr6.1:5007028-5007047 | MS.gene80099:intron | 10.0% |
| !!! | TAAATTTTTTATATATAGAC+CGG | + | chr6.1:5008544-5008563 | None:intergenic | 10.0% |
| !!! | TTTAAAATTTTAAAAACAGA+AGG | + | chr6.1:5007867-5007886 | None:intergenic | 10.0% |
| !! | ATGATTAGAGTATATAAAAT+TGG | + | chr6.1:5006942-5006961 | None:intergenic | 15.0% |
| !! | TTCATTTGATTATACAAAAA+GGG | + | chr6.1:5006707-5006726 | None:intergenic | 15.0% |
| !!! | AAAGTCAATGATTTTTTTTT+TGG | + | chr6.1:5007798-5007817 | None:intergenic | 15.0% |
| !!! | AAATTTTTTATATATAGACC+GGG | + | chr6.1:5008543-5008562 | None:intergenic | 15.0% |
| !!! | ATTATTTGTTTGGATTTTTT+AGG | - | chr6.1:5007636-5007655 | MS.gene80099:intron | 15.0% |
| !!! | TTGATTAATATACATCTTTT+AGG | - | chr6.1:5007484-5007503 | MS.gene80099:CDS | 15.0% |
| !! | AAATGAATGTTGAAACAAAA+GGG | + | chr6.1:5006226-5006245 | None:intergenic | 20.0% |
| !! | CTTAACTTTATTAATAATCC+CGG | - | chr6.1:5008281-5008300 | MS.gene80099:intron | 20.0% |
| !! | GTTCATTTGATTATACAAAA+AGG | + | chr6.1:5006708-5006727 | None:intergenic | 20.0% |
| !! | TAAACTTAACTGATAAAATC+AGG | + | chr6.1:5006156-5006175 | None:intergenic | 20.0% |
| !! | TAAATGAATGTTGAAACAAA+AGG | + | chr6.1:5006227-5006246 | None:intergenic | 20.0% |
| !! | TAATGGAAATAACAATTACT+TGG | - | chr6.1:5006038-5006057 | MS.gene80099:CDS | 20.0% |
| !! | TCAAAGAATTATCATTAAAG+AGG | + | chr6.1:5007468-5007487 | None:intergenic | 20.0% |
| !! | TGAAAAACGAGAAAATTTAT+AGG | + | chr6.1:5007086-5007105 | None:intergenic | 20.0% |
| !! | TTACAGAAACTATATGATTT+GGG | - | chr6.1:5008053-5008072 | MS.gene80099:intron | 20.0% |
| !! | TTCAACATTCATTTATTTGA+AGG | - | chr6.1:5006232-5006251 | MS.gene80099:intron | 20.0% |
| !!! | ATGACAAAAGATATGTTTTA+GGG | - | chr6.1:5008369-5008388 | MS.gene80099:intron | 20.0% |
| !!! | CTAACTAATTGAATTTTTTC+AGG | - | chr6.1:5006759-5006778 | MS.gene80099:intron | 20.0% |
| !!! | TAATTATGTATTGGTGTTTA+AGG | + | chr6.1:5006997-5007016 | None:intergenic | 20.0% |
| !!! | TATAAATTTTCTCGTTTTTC+AGG | - | chr6.1:5007085-5007104 | MS.gene80099:intron | 20.0% |
| !!! | TGCAGTGAATTTTTTTTTTT+AGG | + | chr6.1:5007130-5007149 | None:intergenic | 20.0% |
| !!! | TTTAGCAATGTTTTAAAAAC+CGG | - | chr6.1:5006300-5006319 | MS.gene80099:intron | 20.0% |
| !!! | TTTTTTTAGCCAAAAAGAAA+TGG | + | chr6.1:5006635-5006654 | None:intergenic | 20.0% |
| ! | ATAACTATGAGAAGTAACAT+AGG | + | chr6.1:5008026-5008045 | None:intergenic | 25.0% |
| ! | ATAAGATACTTGACATATTC+AGG | + | chr6.1:5007414-5007433 | None:intergenic | 25.0% |
| ! | ATTGTGAATGATATTATGTC+TGG | - | chr6.1:5008757-5008776 | MS.gene80099:CDS | 25.0% |
| ! | CAAATGTGAATGAAATTTGA+AGG | + | chr6.1:5006677-5006696 | None:intergenic | 25.0% |
| ! | GTTACAGAAACTATATGATT+TGG | - | chr6.1:5008052-5008071 | MS.gene80099:intron | 25.0% |
| ! | TAACCTATTGAACCATAAAT+CGG | + | chr6.1:5006497-5006516 | None:intergenic | 25.0% |
| ! | TGACAACATAGCTATAATTT+CGG | + | chr6.1:5008407-5008426 | None:intergenic | 25.0% |
| !! | ATTGCTTTAAATTCATGCTA+AGG | + | chr6.1:5007547-5007566 | None:intergenic | 25.0% |
| !! | CATGACAAAAGATATGTTTT+AGG | - | chr6.1:5008368-5008387 | MS.gene80099:intron | 25.0% |
| !! | TTACAACATCCATTTCTTTT+TGG | - | chr6.1:5006623-5006642 | MS.gene80099:CDS | 25.0% |
| !! | TTGATAATCAATACCATAAG+GGG | + | chr6.1:5006088-5006107 | None:intergenic | 25.0% |
| !! | TTTTGTCATGATAATTTCGA+CGG | + | chr6.1:5008358-5008377 | None:intergenic | 25.0% |
| !! | TTTTGTGAATAACTACTACT+TGG | - | chr6.1:5007353-5007372 | MS.gene80099:CDS | 25.0% |
| !!! | ACTGCAAAATTTTAAAGTTG+AGG | - | chr6.1:5007144-5007163 | MS.gene80099:intron | 25.0% |
| !!! | ATTTTAGATGTTTTGAAACC+TGG | + | chr6.1:5008610-5008629 | None:intergenic | 25.0% |
| !!! | CAAAAAGAGCTTTTAAAAGT+AGG | - | chr6.1:5007819-5007838 | MS.gene80099:intron | 25.0% |
| !!! | GTTGATAATCAATACCATAA+GGG | + | chr6.1:5006089-5006108 | None:intergenic | 25.0% |
| !!! | TTATGCAGTGTTTTAAAACT+CGG | - | chr6.1:5008433-5008452 | MS.gene80099:intron | 25.0% |
| !!! | TTGGAGGAATATTTTTTCAT+GGG | - | chr6.1:5005965-5005984 | MS.gene80099:CDS | 25.0% |
| AAATGGATGTTGTAACAAGA+AGG | + | chr6.1:5006618-5006637 | None:intergenic | 30.0% | |
| AAGATAGTGCTAAGATTCAT+TGG | + | chr6.1:5008802-5008821 | None:intergenic | 30.0% | |
| ATAGGTACTAAAGCAAAAAG+CGG | + | chr6.1:5007068-5007087 | None:intergenic | 30.0% | |
| ATCAAATGAACATTGACACA+TGG | - | chr6.1:5006717-5006736 | MS.gene80099:intron | 30.0% | |
| ATTAATAATCCCGGTCAATA+CGG | - | chr6.1:5008290-5008309 | MS.gene80099:intron | 30.0% | |
| CAAAAAGCGGTATATTTGTA+GGG | + | chr6.1:5007055-5007074 | None:intergenic | 30.0% | |
| CAATCAATTGAACCAAAAAC+AGG | + | chr6.1:5006526-5006545 | None:intergenic | 30.0% | |
| CAGTTCAATCACAGTTAAAT+CGG | - | chr6.1:5006373-5006392 | MS.gene80099:intron | 30.0% | |
| CATAATCCAATACCATTGTT+AGG | + | chr6.1:5008652-5008671 | None:intergenic | 30.0% | |
| GTACAACTAATCAAAAGCTT+AGG | - | chr6.1:5007506-5007525 | MS.gene80099:CDS | 30.0% | |
| TGATAATCAATACCATAAGG+GGG | + | chr6.1:5006087-5006106 | None:intergenic | 30.0% | |
| ! | AATAGAGTCGGTGATATTTT+AGG | - | chr6.1:5006329-5006348 | MS.gene80099:intron | 30.0% |
| ! | ATAGAGTCGGTGATATTTTA+GGG | - | chr6.1:5006330-5006349 | MS.gene80099:intron | 30.0% |
| ! | ATCAAACAAGTCAAGTGTTT+TGG | - | chr6.1:5007992-5008011 | MS.gene80099:intron | 30.0% |
| !! | ACATCTAAAATAGCTTGTTG+TGG | - | chr6.1:5008619-5008638 | MS.gene80099:intron | 30.0% |
| !! | CTTTTAAAAGTAGGAACTCA+AGG | - | chr6.1:5007828-5007847 | MS.gene80099:intron | 30.0% |
| !! | GGTTGATAATCAATACCATA+AGG | + | chr6.1:5006090-5006109 | None:intergenic | 30.0% |
| !! | TTTTAGGGAAATGATGCAAT+TGG | - | chr6.1:5006345-5006364 | MS.gene80099:intron | 30.0% |
| !!! | ATTTTCAAGAGTACCAAAGT+AGG | - | chr6.1:5007250-5007269 | MS.gene80099:intron | 30.0% |
| !!! | ATTTTTTCAGGTCAGAAACT+CGG | - | chr6.1:5006771-5006790 | MS.gene80099:intron | 30.0% |
| !!! | GCTTTGTTCATTTTAGTTGT+TGG | - | chr6.1:5005946-5005965 | MS.gene80099:CDS | 30.0% |
| !!! | GTTGGAGGAATATTTTTTCA+TGG | - | chr6.1:5005964-5005983 | MS.gene80099:CDS | 30.0% |
| !!! | TTGTTCATTTTAGTTGTTGG+AGG | - | chr6.1:5005949-5005968 | MS.gene80099:CDS | 30.0% |
| AACACAAGGATCAAACCAAT+CGG | - | chr6.1:5006463-5006482 | MS.gene80099:CDS | 35.0% | |
| AACCGGAATGAAAATAGAGT+CGG | - | chr6.1:5006317-5006336 | MS.gene80099:intron | 35.0% | |
| AATTCCAGCTGAAGCAAAAT+TGG | + | chr6.1:5006859-5006878 | None:intergenic | 35.0% | |
| AGTAGGTTAAGTGCTCTTAT+TGG | - | chr6.1:5007267-5007286 | MS.gene80099:intron | 35.0% | |
| ATCAGGAATATTGTAGCCAT+TGG | + | chr6.1:5006139-5006158 | None:intergenic | 35.0% | |
| ATTGGAATACTCAATGACAC+TGG | - | chr6.1:5006876-5006895 | MS.gene80099:intron | 35.0% | |
| CAACTTGAAAACATGCTTCT+AGG | - | chr6.1:5008200-5008219 | MS.gene80099:intron | 35.0% | |
| CAATTGAACCAAAAACAGGT+CGG | + | chr6.1:5006522-5006541 | None:intergenic | 35.0% | |
| CCAAACACTAAGAATGTTCT+TGG | + | chr6.1:5006003-5006022 | None:intergenic | 35.0% | |
| CCAAGAACATTCTTAGTGTT+TGG | - | chr6.1:5006000-5006019 | MS.gene80099:CDS | 35.0% | |
| CTTAATTCAGGGCTTAAGTA+TGG | + | chr6.1:5006813-5006832 | None:intergenic | 35.0% | |
| GAGGACTTATATTATGCACA+TGG | - | chr6.1:5007163-5007182 | MS.gene80099:intron | 35.0% | |
| GCAAAAAGCGGTATATTTGT+AGG | + | chr6.1:5007056-5007075 | None:intergenic | 35.0% | |
| GTTCAATTGATTGAATCGAC+TGG | - | chr6.1:5006533-5006552 | MS.gene80099:CDS | 35.0% | |
| GTTGAACAAGTTTCTTCAAC+CGG | + | chr6.1:5006431-5006450 | None:intergenic | 35.0% | |
| TACTTAAGCCCTGAATTAAG+AGG | - | chr6.1:5006813-5006832 | MS.gene80099:intron | 35.0% | |
| TCTTAGCACTATCTTAGCAT+TGG | - | chr6.1:5008807-5008826 | MS.gene80099:CDS | 35.0% | |
| TTGGAATACTCAATGACACT+GGG | - | chr6.1:5006877-5006896 | MS.gene80099:intron | 35.0% | |
| ! | AAATCGGCAAATTTTCCGAT+TGG | + | chr6.1:5006481-5006500 | None:intergenic | 35.0% |
| ! | AATTTTGCTTCAGCTGGAAT+TGG | - | chr6.1:5006858-5006877 | MS.gene80099:intron | 35.0% |
| ! | AGCTTTTCTCCTCTTAATTC+AGG | + | chr6.1:5006825-5006844 | None:intergenic | 35.0% |
| ! | ATAGAGACGTGTATGCATTT+TGG | - | chr6.1:5008698-5008717 | MS.gene80099:CDS | 35.0% |
| ! | ATTGATTGAATCGACTGGTT+CGG | - | chr6.1:5006538-5006557 | MS.gene80099:CDS | 35.0% |
| ! | GCTTTTCTCCTCTTAATTCA+GGG | + | chr6.1:5006824-5006843 | None:intergenic | 35.0% |
| ! | GGAGATTCACTTGTTGATAA+TGG | - | chr6.1:5006021-5006040 | MS.gene80099:CDS | 35.0% |
| ! | GTGTTACCTGCAAAAGTTTT+TGG | + | chr6.1:5007446-5007465 | None:intergenic | 35.0% |
| ! | GTTGAAGAAACTTGTTCAAC+TGG | - | chr6.1:5006431-5006450 | MS.gene80099:intron | 35.0% |
| ! | TAGAGACGTGTATGCATTTT+GGG | - | chr6.1:5008699-5008718 | MS.gene80099:CDS | 35.0% |
| ! | TGAGTACCAAAAACTTTTGC+AGG | - | chr6.1:5007437-5007456 | MS.gene80099:CDS | 35.0% |
| ! | TTTTCATTGCTGCAAACACT+GGG | - | chr6.1:5008249-5008268 | MS.gene80099:intron | 35.0% |
| !! | AAAATAGCTTGTTGTGGACA+AGG | - | chr6.1:5008625-5008644 | MS.gene80099:intron | 35.0% |
| !! | TAAGAGCACTTAACCTACTT+TGG | + | chr6.1:5007266-5007285 | None:intergenic | 35.0% |
| !! | TCGGAAAATTTGCCGATTTA+TGG | - | chr6.1:5006482-5006501 | MS.gene80099:CDS | 35.0% |
| !! | TGATATTATGTCTGGCTCTA+AGG | - | chr6.1:5008765-5008784 | MS.gene80099:CDS | 35.0% |
| !! | TTGCCGATTTATGGTTCAAT+AGG | - | chr6.1:5006491-5006510 | MS.gene80099:CDS | 35.0% |
| !! | TTTATGTTGTTGCTTTGACC+AGG | - | chr6.1:5008589-5008608 | MS.gene80099:intron | 35.0% |
| !!! | AGAAGCATGTTTTCAAGTTG+AGG | + | chr6.1:5008200-5008219 | None:intergenic | 35.0% |
| !!! | GAAGCATGTTTTCAAGTTGA+GGG | + | chr6.1:5008199-5008218 | None:intergenic | 35.0% |
| ACTTAACAGGAAACTTGGCA+GGG | - | chr6.1:5008223-5008242 | MS.gene80099:intron | 40.0% | |
| AGAGGAGAAAAGCTTCTAGT+TGG | - | chr6.1:5006831-5006850 | MS.gene80099:intron | 40.0% | |
| ATTGCTCAACGTGGTAGAAA+TGG | - | chr6.1:5008131-5008150 | MS.gene80099:intron | 40.0% | |
| CAAGGACCTAACAATGGTAT+TGG | - | chr6.1:5008643-5008662 | MS.gene80099:intron | 40.0% | |
| CACAAAATCATTGCCACCAA+CGG | + | chr6.1:5007340-5007359 | None:intergenic | 40.0% | |
| CTAGGACTTAACAGGAAACT+TGG | - | chr6.1:5008218-5008237 | MS.gene80099:intron | 40.0% | |
| GTCTCTATTTGAGCACAAGT+TGG | + | chr6.1:5008686-5008705 | None:intergenic | 40.0% | |
| TGCATTCCATCCATCTGAAA+AGG | - | chr6.1:5008723-5008742 | MS.gene80099:CDS | 40.0% | |
| ! | ACTGGTTCAATGAGAACACA+AGG | - | chr6.1:5006449-5006468 | MS.gene80099:intron | 40.0% |
| ! | AGGTTAAACCGACCTGTTTT+TGG | - | chr6.1:5006511-5006530 | MS.gene80099:CDS | 40.0% |
| ! | GTTTTCATTGCTGCAAACAC+TGG | - | chr6.1:5008248-5008267 | MS.gene80099:intron | 40.0% |
| ! | TGTTTGCCTTTTCAGATGGA+TGG | + | chr6.1:5008732-5008751 | None:intergenic | 40.0% |
| !! | ACATGCTTCTAGGACTTAAC+AGG | - | chr6.1:5008210-5008229 | MS.gene80099:intron | 40.0% |
| !! | AGCTTGTTTGCCTTTTCAGA+TGG | + | chr6.1:5008736-5008755 | None:intergenic | 40.0% |
| !!! | CACCGACTCTATTTTCATTC+CGG | + | chr6.1:5006322-5006341 | None:intergenic | 40.0% |
| ACCAGTGATCGATCAGGTTA+AGG | - | chr6.1:5008456-5008475 | MS.gene80099:intron | 45.0% | |
| AGAGTTCTTGTGACAGGAAC+AGG | - | chr6.1:5008083-5008102 | MS.gene80099:intron | 45.0% | |
| CAACCATCTCATAGACCAAC+TGG | - | chr6.1:5006105-5006124 | MS.gene80099:CDS | 45.0% | |
| CCACGTTGAGCAATTTCTGA+AGG | + | chr6.1:5008125-5008144 | None:intergenic | 45.0% | |
| CCTTCAGAAATTGCTCAACG+TGG | - | chr6.1:5008122-5008141 | MS.gene80099:intron | 45.0% | |
| CTTGTTCTCATAACCGTTGG+TGG | - | chr6.1:5007324-5007343 | MS.gene80099:CDS | 45.0% | |
| GACTTAACAGGAAACTTGGC+AGG | - | chr6.1:5008222-5008241 | MS.gene80099:intron | 45.0% | |
| GCACTTGTTCTCATAACCGT+TGG | - | chr6.1:5007321-5007340 | MS.gene80099:CDS | 45.0% | |
| GCTAGAAGAGTTCTTGTGAC+AGG | - | chr6.1:5008077-5008096 | MS.gene80099:intron | 45.0% | |
| GGGCTTAAGTATGGCAATGT+TGG | + | chr6.1:5006804-5006823 | None:intergenic | 45.0% | |
| TGACGAGACCTTGCAGAATA+AGG | + | chr6.1:5007381-5007400 | None:intergenic | 45.0% | |
| TGTGGACAAGGACCTAACAA+TGG | - | chr6.1:5008637-5008656 | MS.gene80099:intron | 45.0% | |
| ! | AGCGTGATTACCGTATTGAC+CGG | + | chr6.1:5008303-5008322 | None:intergenic | 45.0% |
| !! | ACTTGGTGCCTTATTCTGCA+AGG | - | chr6.1:5007370-5007389 | MS.gene80099:CDS | 45.0% |
| !!! | TATTTATTTTAATTATGTAT+TGG | + | chr6.1:5007006-5007025 | None:intergenic | 5.0% |
| AGACCGGGTTAACAGTCTTG+CGG | + | chr6.1:5008528-5008547 | None:intergenic | 50.0% | |
| AGGTTAAGGCCTAGGTCACT+GGG | - | chr6.1:5008470-5008489 | MS.gene80099:intron | 50.0% | |
| CCATTGGAGAATCGACCAGT+TGG | + | chr6.1:5006123-5006142 | None:intergenic | 50.0% | |
| GATCGATCAGGTTAAGGCCT+AGG | - | chr6.1:5008462-5008481 | MS.gene80099:intron | 50.0% | |
| GCCTTAACCTGATCGATCAC+TGG | + | chr6.1:5008460-5008479 | None:intergenic | 50.0% | |
| GTGACAGGAACAGGACCTAT+GGG | - | chr6.1:5008092-5008111 | MS.gene80099:intron | 50.0% | |
| TCTGAAGGAACACAGCCCAT+AGG | + | chr6.1:5008110-5008129 | None:intergenic | 50.0% | |
| TGTGACAGGAACAGGACCTA+TGG | - | chr6.1:5008091-5008110 | MS.gene80099:intron | 50.0% | |
| ! | CCAACTGGTCGATTCTCCAA+TGG | - | chr6.1:5006120-5006139 | MS.gene80099:CDS | 50.0% |
| ! | CGACCAGTTGGTCTATGAGA+TGG | + | chr6.1:5006111-5006130 | None:intergenic | 50.0% |
| ! | GCGTGATTACCGTATTGACC+GGG | + | chr6.1:5008302-5008321 | None:intergenic | 50.0% |
| ! | GGAGCCAATTTTGCTTCAGC+TGG | - | chr6.1:5006852-5006871 | MS.gene80099:intron | 50.0% |
| ACTCGGACCAGTGATCGATC+AGG | - | chr6.1:5008450-5008469 | MS.gene80099:intron | 55.0% | |
| CAGACCAGTGGGTCAATGGT+CGG | - | chr6.1:5008501-5008520 | MS.gene80099:intron | 55.0% | |
| CAGGTTAAGGCCTAGGTCAC+TGG | - | chr6.1:5008469-5008488 | MS.gene80099:intron | 55.0% | |
| GACCAATGACCCAGTGACCT+AGG | + | chr6.1:5008482-5008501 | None:intergenic | 55.0% | |
| GGACCGCAAGACTGTTAACC+CGG | - | chr6.1:5008522-5008541 | MS.gene80099:intron | 55.0% | |
| GGGTCATTGGTCAGACCAGT+GGG | - | chr6.1:5008490-5008509 | MS.gene80099:intron | 55.0% | |
| TGGGTCATTGGTCAGACCAG+TGG | - | chr6.1:5008489-5008508 | MS.gene80099:intron | 55.0% | |
| TGGTCAGACCAGTGGGTCAA+TGG | - | chr6.1:5008497-5008516 | MS.gene80099:intron | 55.0% | |
| GGCCTAGGTCACTGGGTCAT+TGG | - | chr6.1:5008477-5008496 | MS.gene80099:intron | 60.0% | |
| ! | CGTGCTGATGCACCCCCTTA+TGG | - | chr6.1:5006072-5006091 | MS.gene80099:CDS | 60.0% |
| CGGTCCGACCATTGACCCAC+TGG | + | chr6.1:5008508-5008527 | None:intergenic | 65.0% | |
| GGGTGCATCAGCACGTGCAG+TGG | + | chr6.1:5006067-5006086 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 5005922 | 5008843 | 5005922 | ID=MS.gene80099 |
| chr6.1 | mRNA | 5005922 | 5008843 | 5005922 | ID=MS.gene80099.t1;Parent=MS.gene80099 |
| chr6.1 | exon | 5008672 | 5008843 | 5008672 | ID=MS.gene80099.t1.exon1;Parent=MS.gene80099.t1 |
| chr6.1 | CDS | 5008672 | 5008843 | 5008672 | ID=cds.MS.gene80099.t1;Parent=MS.gene80099.t1 |
| chr6.1 | exon | 5007857 | 5007984 | 5007857 | ID=MS.gene80099.t1.exon2;Parent=MS.gene80099.t1 |
| chr6.1 | CDS | 5007857 | 5007984 | 5007857 | ID=cds.MS.gene80099.t1;Parent=MS.gene80099.t1 |
| chr6.1 | exon | 5007307 | 5007549 | 5007307 | ID=MS.gene80099.t1.exon3;Parent=MS.gene80099.t1 |
| chr6.1 | CDS | 5007307 | 5007549 | 5007307 | ID=cds.MS.gene80099.t1;Parent=MS.gene80099.t1 |
| chr6.1 | exon | 5006454 | 5006706 | 5006454 | ID=MS.gene80099.t1.exon4;Parent=MS.gene80099.t1 |
| chr6.1 | CDS | 5006454 | 5006706 | 5006454 | ID=cds.MS.gene80099.t1;Parent=MS.gene80099.t1 |
| chr6.1 | exon | 5005922 | 5006154 | 5005922 | ID=MS.gene80099.t1.exon5;Parent=MS.gene80099.t1 |
| chr6.1 | CDS | 5005922 | 5006154 | 5005922 | ID=cds.MS.gene80099.t1;Parent=MS.gene80099.t1 |
| Gene Sequence |
| Protein sequence |
