AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene80329

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80329.t1 MTR_2g049020 99.138 580 5 0 1 580 1 580 0.0 1176
MS.gene80329.t1 MTR_2g048720 74.171 573 142 4 1 571 1 569 0.0 838
MS.gene80329.t1 MTR_5g077580 66.234 616 117 6 1 572 1 569 0.0 796
MS.gene80329.t1 MTR_2g026160 58.025 567 228 5 2 562 3 565 0.0 650
MS.gene80329.t1 MTR_2g026140 54.145 567 235 7 2 562 3 550 0.0 575
MS.gene80329.t1 MTR_5g077590 57.254 386 126 5 182 567 64 410 9.02e-150 437
MS.gene80329.t1 MTR_3g084110 55.966 352 144 2 6 357 16 356 1.02e-132 397
MS.gene80329.t1 MTR_3g084110 50.758 132 57 2 450 580 372 496 4.07e-35 139
MS.gene80329.t1 MTR_7g005910 57.925 347 143 1 21 367 28 371 2.85e-131 393
MS.gene80329.t1 MTR_7g005910 56.154 130 52 1 450 579 376 500 4.71e-39 150
MS.gene80329.t1 MTR_1g116660 56.630 362 146 2 6 367 23 373 7.77e-128 385
MS.gene80329.t1 MTR_1g116660 54.962 131 59 0 447 577 376 506 1.44e-38 149
MS.gene80329.t1 MTR_1g116650 56.906 362 129 2 6 367 66 400 4.93e-126 381
MS.gene80329.t1 MTR_1g116650 54.962 131 54 1 450 580 409 534 4.67e-39 150
MS.gene80329.t1 MTR_6g006260 70.256 195 56 1 223 417 32 224 1.45e-86 269
MS.gene80329.t1 MTR_6g006260 69.898 196 57 1 223 418 33 226 1.30e-85 267
MS.gene80329.t1 MTR_6g006260 71.006 169 47 1 248 416 1 167 4.08e-74 234
MS.gene80329.t1 MTR_7g082270 37.082 329 197 3 33 361 72 390 5.76e-60 206
MS.gene80329.t1 MTR_7g082270 37.082 329 197 3 33 361 72 390 1.07e-59 207
MS.gene80329.t1 MTR_7g082270 35.780 109 70 0 449 557 398 506 1.34e-12 70.9
MS.gene80329.t1 MTR_4g072030 35.244 349 211 6 22 358 23 368 1.62e-58 204
MS.gene80329.t1 MTR_4g072030 33.628 113 69 1 460 572 394 500 1.51e-11 67.4
MS.gene80329.t1 MTR_2g013310 36.310 336 208 3 25 357 52 384 7.42e-58 202
MS.gene80329.t1 MTR_2g013310 39.091 110 60 1 453 555 393 502 2.46e-14 76.3
MS.gene80329.t1 MTR_6g018790 37.195 328 196 3 33 360 112 429 1.62e-57 202
MS.gene80329.t1 MTR_6g018790 35.849 106 68 0 449 554 438 543 4.53e-12 68.9
MS.gene80329.t1 MTR_6g088450 37.183 355 210 6 7 353 37 386 1.60e-54 193
MS.gene80329.t1 MTR_4g069500 32.778 360 222 6 22 364 26 382 4.54e-53 189
MS.gene80329.t1 MTR_4g069500 30.894 123 74 2 455 572 388 504 5.65e-11 65.5
MS.gene80329.t1 MTR_3g116240 33.871 372 208 8 20 362 18 380 5.90e-53 189
MS.gene80329.t1 MTR_2g013310 35.987 314 195 3 47 357 1 311 2.51e-52 186
MS.gene80329.t1 MTR_2g013310 39.091 110 60 1 453 555 320 429 2.74e-14 75.9
MS.gene80329.t1 MTR_7g446340 34.911 338 212 5 25 358 54 387 2.53e-51 184
MS.gene80329.t1 MTR_7g446340 45.833 96 52 0 461 556 410 505 7.83e-18 87.4
MS.gene80329.t1 MTR_6g007340 34.911 338 212 5 25 358 54 387 2.53e-51 184
MS.gene80329.t1 MTR_6g007340 45.833 96 52 0 461 556 410 505 7.83e-18 87.4
MS.gene80329.t1 MTR_5g006070 32.703 370 221 7 24 372 20 382 6.22e-51 183
MS.gene80329.t1 MTR_8g103500 35.312 337 209 4 23 353 15 348 1.58e-50 182
MS.gene80329.t1 MTR_8g103500 39.560 91 55 0 463 553 381 471 3.33e-11 66.2
MS.gene80329.t1 MTR_8g077890 34.783 345 205 6 23 351 16 356 1.16e-49 179
MS.gene80329.t1 MTR_8g077890 34.906 106 69 0 452 557 381 486 1.28e-13 73.9
MS.gene80329.t1 MTR_5g075300 33.799 358 215 5 23 361 16 370 1.86e-49 179
MS.gene80329.t1 MTR_5g075300 36.190 105 67 0 452 556 381 485 4.02e-12 69.3
MS.gene80329.t1 MTR_4g069500 32.239 335 207 6 47 364 1 332 1.20e-46 171
MS.gene80329.t1 MTR_4g069500 30.894 123 74 2 455 572 338 454 6.85e-11 65.1
MS.gene80329.t1 MTR_1g104750 31.536 371 225 9 23 372 20 382 4.54e-46 169
MS.gene80329.t1 MTR_5g006070 32.249 338 204 6 53 372 4 334 4.67e-46 169
MS.gene80329.t1 MTR_1g104770 31.492 362 218 7 33 372 30 383 5.76e-46 169
MS.gene80329.t1 MTR_5g019870 33.149 362 215 8 16 358 5 358 2.01e-45 167
MS.gene80329.t1 MTR_1g104780 32.873 362 213 8 33 372 29 382 4.92e-45 167
MS.gene80329.t1 MTR_4g064820 32.865 356 221 8 20 360 92 444 2.51e-44 164
MS.gene80329.t1 MTR_5g094760 30.952 378 234 7 1 359 1 370 3.77e-44 164
MS.gene80329.t1 MTR_0204s0020 29.412 374 238 6 1 360 1 362 1.41e-43 162
MS.gene80329.t1 MTR_0204s0020 38.793 116 58 4 454 565 381 487 7.40e-13 71.6
MS.gene80329.t1 MTR_0204s0020 30.159 378 233 8 1 360 1 365 3.24e-43 161
MS.gene80329.t1 MTR_0204s0020 38.793 116 58 4 454 565 384 490 7.59e-13 71.2
MS.gene80329.t1 MTR_1g038630 29.586 338 213 5 24 343 21 351 4.21e-43 161
MS.gene80329.t1 MTR_1g038600 30.091 329 205 5 24 343 21 333 4.31e-43 161
MS.gene80329.t1 MTR_8g102860 30.053 376 230 8 21 372 18 384 6.56e-43 161
MS.gene80329.t1 MTR_7g091690 31.268 355 214 6 25 359 26 370 2.45e-42 159
MS.gene80329.t1 MTR_4g077740 31.778 343 201 8 36 356 55 386 1.21e-41 157
MS.gene80329.t1 MTR_4g077740 42.424 99 57 0 452 550 399 497 1.57e-14 76.6
MS.gene80329.t1 MTR_4g090600 31.085 341 205 6 24 343 21 352 1.49e-41 157
MS.gene80329.t1 MTR_5g082540 29.290 338 214 5 24 343 21 351 4.26e-41 156
MS.gene80329.t1 MTR_5g041550 31.304 345 202 9 23 343 20 353 1.44e-40 154
MS.gene80329.t1 MTR_8g102860 31.132 318 208 5 57 372 24 332 2.42e-40 153
MS.gene80329.t1 MTR_4g116790 30.655 336 209 6 25 343 26 354 2.89e-40 151
MS.gene80329.t1 MTR_6g087910 31.977 344 217 7 14 355 40 368 4.83e-40 152
MS.gene80329.t1 MTR_4g091370 31.268 339 207 5 24 343 21 352 4.99e-40 153
MS.gene80329.t1 MTR_7g113960 29.781 366 226 9 36 387 37 385 8.37e-40 150
MS.gene80329.t1 MTR_4g116790 29.745 353 224 6 25 360 26 371 9.26e-40 152
MS.gene80329.t1 MTR_3g116060 39.091 220 129 3 29 246 7 223 1.11e-39 154
MS.gene80329.t1 MTR_3g116060 37.079 89 56 0 459 547 623 711 7.71e-12 68.6
MS.gene80329.t1 MTR_3g080240 31.268 339 218 6 24 360 95 420 2.75e-39 151
MS.gene80329.t1 MTR_0204s0040 30.357 336 210 6 25 343 28 356 5.11e-39 150
MS.gene80329.t1 MTR_0204s0040 37.838 111 58 3 457 564 395 497 2.79e-11 66.6
MS.gene80329.t1 MTR_4g116770 30.793 328 203 6 33 343 232 552 8.12e-39 152
MS.gene80329.t1 MTR_4g116770 38.679 106 58 2 454 556 588 689 3.23e-11 66.6
MS.gene80329.t1 MTR_0009s0370 30.460 348 211 7 33 358 28 366 1.65e-38 149
MS.gene80329.t1 MTR_7g113960 30.294 340 216 8 36 371 37 359 2.14e-38 147
MS.gene80329.t1 MTR_7g113960 39.806 103 61 1 452 554 358 459 5.79e-13 71.6
MS.gene80329.t1 MTR_3g093010 29.661 354 220 8 26 358 22 367 2.30e-38 148
MS.gene80329.t1 MTR_6g087040 28.986 345 217 6 35 359 35 371 1.18e-37 146
MS.gene80329.t1 MTR_6g088375 28.986 345 217 6 35 359 35 371 1.18e-37 146
MS.gene80329.t1 MTR_1g022315 32.404 287 176 5 78 361 98 369 2.05e-37 145
MS.gene80329.t1 MTR_1g022315 30.833 120 79 2 438 554 371 489 2.02e-11 67.0
MS.gene80329.t1 MTR_3g023480 30.199 351 208 9 33 358 28 366 2.75e-37 145
MS.gene80329.t1 MTR_4g013205 32.036 334 212 6 21 353 33 352 3.22e-37 144
MS.gene80329.t1 MTR_1g022315 32.056 287 173 6 80 361 1 270 2.09e-36 140
MS.gene80329.t1 MTR_1g022315 31.624 117 76 2 438 551 272 387 2.26e-11 66.2
MS.gene80329.t1 MTR_3g074380 29.573 328 200 7 37 343 37 354 5.12e-36 139
MS.gene80329.t1 MTR_3g118530 33.945 327 196 8 36 353 14 329 1.23e-35 142
MS.gene80329.t1 MTR_2g020710 31.250 336 214 7 26 360 49 368 2.06e-35 137
MS.gene80329.t1 MTR_2g020710 31.250 336 214 7 26 360 49 368 2.28e-35 138
MS.gene80329.t1 MTR_3g118530 33.945 327 196 8 36 353 14 329 2.53e-35 142
MS.gene80329.t1 MTR_3g118530 34.653 101 66 0 447 547 621 721 2.64e-12 70.1
MS.gene80329.t1 MTR_2g020710 31.250 336 214 7 26 360 49 368 3.06e-35 137
MS.gene80329.t1 MTR_7g094450 30.548 347 208 6 24 361 37 359 4.60e-35 138
MS.gene80329.t1 MTR_7g094450 39.048 105 59 2 452 554 373 474 1.11e-13 73.9
MS.gene80329.t1 MTR_3g074270 26.842 380 248 7 1 364 6 371 5.21e-35 138
MS.gene80329.t1 MTR_2g020710 31.250 336 214 7 26 360 49 368 1.01e-34 137
MS.gene80329.t1 MTR_3g093060 31.164 292 186 7 56 343 25 305 2.46e-34 135
MS.gene80329.t1 MTR_3g074390 29.651 344 216 7 33 359 35 369 3.12e-34 136
MS.gene80329.t1 MTR_3g008170 30.702 342 205 9 25 343 22 354 3.29e-34 136
MS.gene80329.t1 MTR_8g077310 31.395 344 205 9 26 361 47 367 4.36e-34 134
MS.gene80329.t1 MTR_5g024740 33.333 231 151 3 26 254 4 233 6.33e-34 137
MS.gene80329.t1 MTR_4g118610 29.499 339 216 6 26 360 52 371 6.66e-34 134
MS.gene80329.t1 MTR_3g007910 31.132 318 186 7 33 343 29 320 9.47e-34 134
MS.gene80329.t1 MTR_7g113970 28.916 332 218 7 36 366 72 386 9.94e-34 133
MS.gene80329.t1 MTR_8g077310 31.395 344 205 9 26 361 47 367 1.44e-33 134
MS.gene80329.t1 MTR_8g077310 33.333 117 70 3 435 550 373 482 4.55e-12 68.9
MS.gene80329.t1 MTR_2g020710 32.281 285 179 6 78 361 9 280 1.47e-33 132
MS.gene80329.t1 MTR_7g113970 28.916 332 218 7 36 366 72 386 2.47e-33 134
MS.gene80329.t1 MTR_7g113970 36.111 108 68 1 452 559 395 501 5.66e-13 72.0
MS.gene80329.t1 MTR_4g118610 29.499 339 216 6 26 360 52 371 4.37e-33 132
MS.gene80329.t1 MTR_4g118610 34.951 103 66 1 452 554 386 487 5.77e-12 68.6
MS.gene80329.t1 MTR_3g074410 30.000 340 211 7 37 358 36 366 7.18e-33 132
MS.gene80329.t1 MTR_8g077300 31.399 293 181 6 73 361 83 359 8.67e-33 132
MS.gene80329.t1 MTR_5g044910 33.333 231 151 3 26 254 4 233 1.52e-32 133
MS.gene80329.t1 MTR_5g044910 31.818 110 74 1 438 547 593 701 7.34e-11 65.5
MS.gene80329.t1 MTR_8g077310 32.414 290 168 8 80 361 1 270 6.27e-32 127
MS.gene80329.t1 MTR_8g077310 29.710 138 89 3 414 550 255 385 3.95e-12 68.6
MS.gene80329.t1 MTR_7g094110 29.942 344 218 8 22 361 37 361 1.11e-31 128
MS.gene80329.t1 MTR_5g020270 33.224 304 174 9 78 371 99 383 1.92e-31 128
MS.gene80329.t1 MTR_5g020270 33.607 122 71 3 437 550 366 485 6.41e-13 71.6
MS.gene80329.t1 MTR_7g094110 29.942 344 218 8 22 361 37 361 1.94e-31 127
MS.gene80329.t1 MTR_7g094110 42.000 100 55 2 452 550 375 472 1.04e-13 73.9
MS.gene80329.t1 MTR_3g008160 30.233 344 207 9 23 343 20 353 3.47e-31 127
MS.gene80329.t1 MTR_8g073100 32.444 225 147 4 26 247 4 226 4.79e-31 129
MS.gene80329.t1 MTR_5g020270 32.781 302 174 9 80 371 1 283 4.27e-30 122
MS.gene80329.t1 MTR_5g020270 33.607 122 71 3 437 550 266 385 5.83e-13 71.2
MS.gene80329.t1 MTR_3g008160 33.977 259 159 6 89 343 54 304 3.97e-29 120
MS.gene80329.t1 MTR_5g020270 34.874 238 138 6 78 311 99 323 8.28e-27 114
MS.gene80329.t1 MTR_5g020270 33.607 122 71 3 437 550 345 464 6.47e-13 71.6
MS.gene80329.t1 MTR_4g069500 31.156 199 108 5 188 364 2 193 3.27e-20 92.4
MS.gene80329.t1 MTR_4g069500 30.894 123 74 2 455 572 199 315 2.96e-11 65.5
MS.gene80329.t1 MTR_3g074320 32.086 187 116 6 174 358 20 197 2.64e-15 77.8
MS.gene80329.t1 MTR_3g074340 32.979 188 114 6 174 359 20 197 6.19e-15 76.6
MS.gene80329.t1 MTR_3g074370 32.979 188 114 6 174 359 20 197 7.71e-15 76.6
MS.gene80329.t1 MTR_3g074400 29.478 268 154 9 93 359 57 290 5.94e-14 74.7
MS.gene80329.t1 MTR_4g064807 40.000 75 45 0 477 551 3 77 5.61e-12 62.0
MS.gene80329.t1 MTR_2g081930 26.667 285 176 12 76 341 131 401 5.70e-11 65.5
MS.gene80329.t1 MTR_5g096000 31.757 148 95 3 33 178 29 172 7.43e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80329.t1 AT1G30220 71.979 571 155 4 1 567 1 570 0.0 845
MS.gene80329.t1 AT4G16480 58.259 563 223 6 1 554 2 561 0.0 653
MS.gene80329.t1 AT4G16480 58.259 563 223 6 1 554 2 561 0.0 653
MS.gene80329.t1 AT4G16480 58.259 563 223 6 1 554 2 561 0.0 653
MS.gene80329.t1 AT2G35740 55.000 540 231 5 24 554 24 560 0.0 635
MS.gene80329.t1 AT2G43330 58.382 346 140 2 23 367 28 370 7.48e-124 374
MS.gene80329.t1 AT2G43330 60.163 123 48 1 450 571 376 498 7.24e-42 158
MS.gene80329.t1 AT3G18830 28.571 581 297 13 22 578 32 518 3.96e-60 209
MS.gene80329.t1 AT4G36670 36.390 349 203 6 23 356 14 358 3.43e-56 197
MS.gene80329.t1 AT4G36670 36.538 104 66 0 452 555 378 481 4.17e-14 75.5
MS.gene80329.t1 AT2G20780 36.364 341 209 5 20 357 49 384 7.59e-54 191
MS.gene80329.t1 AT2G20780 41.284 109 60 1 452 556 399 507 1.49e-16 83.2
MS.gene80329.t1 AT5G16150 36.909 317 190 3 33 349 112 418 1.18e-52 189
MS.gene80329.t1 AT5G16150 34.259 108 71 0 443 550 432 539 2.30e-11 67.0
MS.gene80329.t1 AT5G16150 36.909 317 190 3 33 349 112 418 1.18e-52 189
MS.gene80329.t1 AT5G16150 34.259 108 71 0 443 550 432 539 2.30e-11 67.0
MS.gene80329.t1 AT5G16150 36.909 317 190 3 33 349 112 418 1.18e-52 189
MS.gene80329.t1 AT5G16150 34.259 108 71 0 443 550 432 539 2.30e-11 67.0
MS.gene80329.t1 AT2G18480 37.183 355 200 8 23 358 15 365 5.59e-52 186
MS.gene80329.t1 AT2G18480 44.118 102 57 0 452 553 382 483 3.85e-17 85.1
MS.gene80329.t1 AT2G16120 33.239 355 208 5 22 356 22 367 1.43e-50 182
MS.gene80329.t1 AT2G16120 33.613 119 79 0 452 570 388 506 1.53e-13 73.6
MS.gene80329.t1 AT3G05960 32.527 372 222 9 5 359 5 364 2.17e-50 182
MS.gene80329.t1 AT1G07340 35.258 329 187 6 33 343 30 350 3.40e-50 181
MS.gene80329.t1 AT2G16130 33.428 353 202 6 28 356 24 367 9.81e-49 177
MS.gene80329.t1 AT2G16130 35.455 110 71 0 452 561 388 497 1.32e-13 73.9
MS.gene80329.t1 AT5G26250 32.861 353 211 9 25 359 21 365 5.94e-48 175
MS.gene80329.t1 AT1G50310 31.429 350 216 5 25 356 24 367 9.11e-48 174
MS.gene80329.t1 AT3G19940 30.564 337 209 6 25 343 24 353 1.26e-44 166
MS.gene80329.t1 AT5G26340 32.329 365 218 7 24 367 21 377 1.99e-44 166
MS.gene80329.t1 AT5G59250 31.989 372 228 11 18 371 92 456 2.46e-44 166
MS.gene80329.t1 AT5G59250 40.000 95 57 0 457 551 460 554 1.24e-12 70.9
MS.gene80329.t1 AT2G20780 34.940 332 203 7 31 357 3 326 7.56e-44 163
MS.gene80329.t1 AT2G20780 41.284 109 60 1 452 556 341 449 2.27e-16 82.4
MS.gene80329.t1 AT1G05030 33.951 324 205 4 33 356 86 400 2.85e-43 162
MS.gene80329.t1 AT1G11260 32.456 342 201 7 23 343 20 352 1.28e-42 160
MS.gene80329.t1 AT5G23270 31.868 364 205 8 2 343 12 354 1.49e-42 160
MS.gene80329.t1 AT1G67300 31.099 373 238 8 4 373 31 387 2.11e-41 156
MS.gene80329.t1 AT5G17010 31.956 363 226 8 26 373 48 404 2.45e-41 156
MS.gene80329.t1 AT5G17010 31.956 363 226 8 26 373 48 404 2.45e-41 156
MS.gene80329.t1 AT5G17010 31.956 363 226 8 26 373 48 404 2.45e-41 156
MS.gene80329.t1 AT1G77210 30.278 360 220 7 2 343 9 355 2.91e-41 156
MS.gene80329.t1 AT1G77210 30.278 360 220 7 2 343 9 355 2.91e-41 156
MS.gene80329.t1 AT1G79820 31.653 357 225 8 14 368 44 383 2.22e-40 153
MS.gene80329.t1 AT3G51490 36.607 224 137 4 26 246 4 225 4.75e-40 155
MS.gene80329.t1 AT3G51490 34.653 101 66 0 447 547 606 706 9.43e-12 68.6
MS.gene80329.t1 AT3G51490 36.607 224 137 4 26 246 4 225 5.25e-40 155
MS.gene80329.t1 AT3G51490 42.718 103 50 2 265 358 503 605 1.71e-12 70.9
MS.gene80329.t1 AT3G51490 34.653 101 66 0 447 547 614 714 8.78e-12 68.6
MS.gene80329.t1 AT1G67300 30.986 355 228 7 4 355 31 371 6.17e-40 151
MS.gene80329.t1 AT1G67300 30.986 355 228 7 4 355 31 371 6.17e-40 151
MS.gene80329.t1 AT5G61520 30.946 391 236 11 7 372 5 386 6.19e-40 153
MS.gene80329.t1 AT1G79820 31.933 357 224 8 14 368 44 383 8.17e-40 152
MS.gene80329.t1 AT1G79820 31.933 357 224 8 14 368 44 383 8.17e-40 152
MS.gene80329.t1 AT1G67300 30.986 355 228 7 4 355 31 371 8.40e-40 151
MS.gene80329.t1 AT1G67300 30.986 355 228 7 4 355 31 371 8.40e-40 151
MS.gene80329.t1 AT1G67300 30.986 355 228 7 4 355 31 371 1.12e-39 152
MS.gene80329.t1 AT1G67300 30.986 355 228 7 4 355 31 371 1.12e-39 152
MS.gene80329.t1 AT3G19930 31.176 340 205 8 24 343 21 351 1.48e-39 152
MS.gene80329.t1 AT3G19930 31.176 340 205 8 24 343 21 351 1.48e-39 152
MS.gene80329.t1 AT1G20840 38.117 223 131 4 29 248 7 225 1.52e-39 154
MS.gene80329.t1 AT1G20840 39.785 93 56 0 459 551 625 717 3.84e-13 72.8
MS.gene80329.t1 AT1G20840 38.117 223 131 4 29 248 7 225 1.52e-39 154
MS.gene80329.t1 AT1G20840 39.785 93 56 0 459 551 625 717 3.84e-13 72.8
MS.gene80329.t1 AT4G21480 32.249 338 201 5 25 343 22 350 4.22e-39 150
MS.gene80329.t1 AT4G02050 29.261 352 225 7 25 359 26 370 1.12e-38 149
MS.gene80329.t1 AT4G02050 29.261 352 225 7 25 359 26 370 1.12e-38 149
MS.gene80329.t1 AT1G05030 34.021 291 184 3 67 357 67 349 1.65e-38 148
MS.gene80329.t1 AT2G48020 30.499 341 218 7 23 361 24 347 3.48e-38 145
MS.gene80329.t1 AT3G03090 30.029 343 209 6 35 356 56 388 1.36e-37 146
MS.gene80329.t1 AT2G48020 30.499 341 218 7 23 361 24 347 1.63e-37 145
MS.gene80329.t1 AT2G48020 44.231 104 55 2 452 554 361 462 3.47e-17 84.7
MS.gene80329.t1 AT2G48020 30.499 341 218 7 23 361 24 347 1.63e-37 145
MS.gene80329.t1 AT2G48020 44.231 104 55 2 452 554 361 462 3.47e-17 84.7
MS.gene80329.t1 AT5G61520 33.010 309 195 8 67 372 39 338 5.96e-37 143
MS.gene80329.t1 AT5G27360 33.233 331 203 6 31 360 40 353 1.94e-36 141
MS.gene80329.t1 AT5G27360 33.233 331 203 6 31 360 88 401 2.49e-36 142
MS.gene80329.t1 AT5G27360 35.135 111 71 1 446 556 410 519 2.87e-11 66.6
MS.gene80329.t1 AT5G27360 33.233 331 203 6 31 360 40 353 5.70e-36 141
MS.gene80329.t1 AT5G27360 37.255 102 63 1 455 556 371 471 2.59e-11 66.6
MS.gene80329.t1 AT2G48020 30.960 323 204 7 23 343 24 329 2.31e-35 136
MS.gene80329.t1 AT1G75220 32.653 294 180 6 78 368 97 375 4.37e-35 138
MS.gene80329.t1 AT1G75220 35.870 92 58 1 463 554 397 487 5.45e-12 68.9
MS.gene80329.t1 AT3G05400 26.582 474 255 13 78 550 75 456 1.17e-34 137
MS.gene80329.t1 AT4G35300 37.559 213 130 3 36 246 14 225 1.49e-34 139
MS.gene80329.t1 AT4G35300 39.583 96 58 0 452 547 615 710 9.70e-14 74.7
MS.gene80329.t1 AT4G35300 37.559 213 130 3 36 246 14 225 1.49e-34 139
MS.gene80329.t1 AT4G35300 39.583 96 58 0 452 547 615 710 9.70e-14 74.7
MS.gene80329.t1 AT4G35300 37.559 213 130 3 36 246 14 225 1.49e-34 139
MS.gene80329.t1 AT4G35300 39.583 96 58 0 452 547 615 710 9.70e-14 74.7
MS.gene80329.t1 AT4G35300 37.559 213 130 3 36 246 14 225 1.60e-34 139
MS.gene80329.t1 AT4G35300 39.583 96 58 0 452 547 625 720 1.02e-13 74.7
MS.gene80329.t1 AT4G35300 37.559 213 130 3 36 246 14 225 1.60e-34 139
MS.gene80329.t1 AT4G35300 39.583 96 58 0 452 547 625 720 1.02e-13 74.7
MS.gene80329.t1 AT4G35300 37.559 213 130 3 36 246 14 225 1.60e-34 139
MS.gene80329.t1 AT4G35300 39.583 96 58 0 452 547 625 720 1.02e-13 74.7
MS.gene80329.t1 AT4G35300 37.559 213 130 3 36 246 14 225 1.60e-34 139
MS.gene80329.t1 AT4G35300 39.583 96 58 0 452 547 625 720 1.02e-13 74.7
MS.gene80329.t1 AT4G35300 37.559 213 130 3 36 246 14 225 1.60e-34 139
MS.gene80329.t1 AT4G35300 39.583 96 58 0 452 547 625 720 1.02e-13 74.7
MS.gene80329.t1 AT4G35300 37.559 213 130 3 36 246 14 225 1.60e-34 139
MS.gene80329.t1 AT4G35300 39.583 96 58 0 452 547 625 720 1.02e-13 74.7
MS.gene80329.t1 AT4G35300 37.559 213 130 3 36 246 14 225 1.60e-34 139
MS.gene80329.t1 AT4G35300 39.583 96 58 0 452 547 625 720 1.02e-13 74.7
MS.gene80329.t1 AT3G05155 29.882 338 218 6 23 360 24 342 9.02e-34 134
MS.gene80329.t1 AT3G05155 37.255 102 59 2 452 551 358 456 1.98e-14 76.3
MS.gene80329.t1 AT1G19450 33.000 300 171 7 78 368 98 376 1.72e-33 134
MS.gene80329.t1 AT3G05155 30.218 321 205 6 23 343 24 325 3.32e-33 130
MS.gene80329.t1 AT5G18840 30.178 338 215 7 26 360 44 363 1.02e-32 131
MS.gene80329.t1 AT5G18840 39.815 108 60 2 452 557 378 482 1.77e-13 73.6
MS.gene80329.t1 AT3G05400 26.160 474 237 14 78 550 75 436 1.18e-31 128
MS.gene80329.t1 AT1G08930 29.305 331 216 8 31 360 63 376 1.50e-31 128
MS.gene80329.t1 AT1G08930 33.000 100 66 1 455 554 394 492 6.19e-12 68.6
MS.gene80329.t1 AT1G08930 29.305 331 216 8 31 360 63 376 1.50e-31 128
MS.gene80329.t1 AT1G08930 33.000 100 66 1 455 554 394 492 6.19e-12 68.6
MS.gene80329.t1 AT1G34580 28.446 341 218 6 37 358 35 368 1.67e-31 128
MS.gene80329.t1 AT5G27350 30.904 343 219 6 31 373 36 360 3.84e-31 127
MS.gene80329.t1 AT5G27350 38.384 99 60 1 452 550 364 461 5.30e-11 65.5
MS.gene80329.t1 AT3G51490 37.714 175 105 3 75 246 2 175 1.91e-30 127
MS.gene80329.t1 AT3G51490 42.718 103 50 2 265 358 453 555 1.65e-12 70.9
MS.gene80329.t1 AT3G51490 34.653 101 66 0 447 547 564 664 8.94e-12 68.6
MS.gene80329.t1 AT1G54730 29.123 285 187 6 78 361 81 351 3.40e-30 123
MS.gene80329.t1 AT1G54730 29.123 285 187 6 78 361 81 351 3.59e-30 124
MS.gene80329.t1 AT1G54730 37.000 100 62 1 451 550 364 462 1.24e-12 70.9
MS.gene80329.t1 AT1G54730 29.225 284 186 6 78 360 81 350 3.65e-30 123
MS.gene80329.t1 AT1G54730 29.225 284 186 6 78 360 81 350 3.65e-30 123
MS.gene80329.t1 AT1G34580 29.831 295 197 4 67 358 31 318 4.27e-30 124
MS.gene80329.t1 AT3G05165 29.909 331 214 5 31 360 35 348 9.69e-30 122
MS.gene80329.t1 AT3G05165 29.909 331 214 5 31 360 35 348 9.69e-30 122
MS.gene80329.t1 AT1G50310 31.963 219 142 3 139 356 12 224 1.05e-29 121
MS.gene80329.t1 AT3G05150 32.028 281 175 6 78 356 84 350 1.17e-29 122
MS.gene80329.t1 AT3G05150 40.385 104 57 2 452 553 369 469 6.82e-15 77.8
MS.gene80329.t1 AT3G05150 32.028 281 175 6 78 356 84 350 1.17e-29 122
MS.gene80329.t1 AT3G05150 40.385 104 57 2 452 553 369 469 6.82e-15 77.8
MS.gene80329.t1 AT3G05150 32.028 281 175 6 78 356 84 350 1.18e-29 122
MS.gene80329.t1 AT3G05150 38.462 117 66 3 452 566 369 481 1.03e-15 80.5
MS.gene80329.t1 AT1G54730 29.963 267 172 6 78 343 81 333 2.81e-29 119
MS.gene80329.t1 AT3G05165 29.909 331 214 5 31 360 35 348 3.27e-29 121
MS.gene80329.t1 AT3G05165 29.909 331 214 5 31 360 35 348 3.27e-29 121
MS.gene80329.t1 AT3G05165 29.909 331 214 5 31 360 35 348 3.27e-29 121
MS.gene80329.t1 AT4G04750 30.986 284 183 5 78 360 85 356 3.43e-29 121
MS.gene80329.t1 AT4G04750 30.986 284 183 5 78 360 85 356 3.43e-29 121
MS.gene80329.t1 AT3G05165 29.909 331 214 5 31 360 35 348 3.68e-29 121
MS.gene80329.t1 AT4G04750 30.986 284 183 5 78 360 129 400 4.30e-29 121
MS.gene80329.t1 AT4G04750 35.849 106 67 1 452 557 415 519 9.55e-11 65.1
MS.gene80329.t1 AT5G27360 32.950 261 160 5 101 360 3 249 1.08e-28 118
MS.gene80329.t1 AT5G27360 37.255 102 63 1 455 556 267 367 2.83e-11 65.9
MS.gene80329.t1 AT5G27360 32.950 261 160 5 101 360 3 249 1.08e-28 118
MS.gene80329.t1 AT5G27360 37.255 102 63 1 455 556 267 367 2.83e-11 65.9
MS.gene80329.t1 AT1G08920 30.769 325 207 8 26 349 32 339 1.31e-28 119
MS.gene80329.t1 AT1G08920 30.769 325 207 8 26 349 32 339 1.35e-28 119
MS.gene80329.t1 AT1G08920 37.374 99 61 1 455 553 368 465 5.63e-11 65.5
MS.gene80329.t1 AT5G17010 32.740 281 165 7 26 287 45 320 1.77e-28 119
MS.gene80329.t1 AT3G05160 29.607 331 215 6 31 360 26 339 1.92e-28 119
MS.gene80329.t1 AT3G05160 29.930 284 184 5 78 360 21 290 6.24e-28 116
MS.gene80329.t1 AT3G05160 29.930 284 184 5 78 360 21 290 6.24e-28 116
MS.gene80329.t1 AT1G08920 30.530 321 205 8 26 345 32 335 6.50e-28 117
MS.gene80329.t1 AT1G08920 37.374 99 61 1 455 553 375 472 5.53e-11 65.5
MS.gene80329.t1 AT1G79820 27.731 357 191 7 14 368 44 335 6.97e-27 114
MS.gene80329.t1 AT4G04760 28.902 346 228 8 23 366 29 358 8.86e-27 114
MS.gene80329.t1 AT4G04760 34.454 119 72 3 435 553 355 467 2.73e-11 66.6
MS.gene80329.t1 AT4G04760 29.310 290 193 5 78 366 21 299 1.70e-26 112
MS.gene80329.t1 AT4G04760 34.454 119 72 3 435 553 296 408 2.32e-11 66.6
MS.gene80329.t1 AT1G08890 28.727 275 181 5 78 351 76 336 1.96e-26 113
MS.gene80329.t1 AT1G08890 35.294 102 61 2 454 553 362 460 4.70e-11 65.9
MS.gene80329.t1 AT1G54730 28.794 257 170 6 78 333 81 325 2.48e-26 111
MS.gene80329.t1 AT1G54730 28.794 257 170 6 78 333 81 325 2.90e-26 111
MS.gene80329.t1 AT1G54730 28.794 257 170 6 78 333 81 325 3.50e-26 112
MS.gene80329.t1 AT1G54730 37.000 100 62 1 451 550 343 441 1.37e-12 70.5
MS.gene80329.t1 AT1G54730 30.172 232 151 5 78 308 81 302 6.91e-26 108
MS.gene80329.t1 AT1G54730 30.172 232 151 5 78 308 81 302 6.91e-26 108
MS.gene80329.t1 AT1G08900 29.818 275 178 4 78 351 74 334 1.29e-24 107
MS.gene80329.t1 AT1G77210 33.010 206 131 3 139 343 7 206 2.21e-24 105
MS.gene80329.t1 AT1G08900 29.818 275 178 4 78 351 66 326 2.39e-24 106
MS.gene80329.t1 AT1G08900 36.538 104 65 1 452 555 350 452 8.66e-13 71.2
MS.gene80329.t1 AT1G08900 29.818 275 178 4 78 351 74 334 2.52e-24 106
MS.gene80329.t1 AT1G08900 36.538 104 65 1 452 555 358 460 8.66e-13 71.2
MS.gene80329.t1 AT1G08900 29.818 275 178 4 78 351 74 334 2.52e-24 106
MS.gene80329.t1 AT1G08900 36.538 104 65 1 452 555 358 460 8.66e-13 71.2
MS.gene80329.t1 AT1G08900 29.818 275 178 4 78 351 32 292 2.53e-24 106
MS.gene80329.t1 AT1G08900 36.538 104 65 1 452 555 316 418 8.90e-13 70.9
MS.gene80329.t1 AT4G04760 29.154 319 208 8 23 339 29 331 2.37e-23 103
MS.gene80329.t1 AT4G04760 36.275 102 64 1 452 553 364 464 2.83e-11 66.6
MS.gene80329.t1 AT3G20460 27.612 268 175 5 78 342 102 353 5.79e-23 102
MS.gene80329.t1 AT1G79820 25.911 247 123 4 122 368 87 273 3.49e-14 75.1
MS.gene80329.t1 AT4G35300 39.583 96 58 0 452 547 428 523 4.56e-14 75.5
MS.gene80329.t1 AT1G76430 24.276 449 261 16 5 393 1 430 1.38e-12 70.9

Find 117 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGGAAGTCCCTTTGTTTC+TGG 0.144531 2.4:-42475326 None:intergenic
AACAACCAACGGGGCGATTC+TGG 0.183516 2.4:-42474068 None:intergenic
CATATTCCTCTGTATCTTAA+TGG 0.207748 2.4:-42475152 None:intergenic
TAAACCTCTTCTTACTGTTT+TGG 0.262901 2.4:-42474359 None:intergenic
TTTCATTGGCTCAGTTGTTA+TGG 0.283431 2.4:+42473273 MS.gene80329:CDS
CTTCGTCTTGCTTTCTCTGC+TGG 0.283773 2.4:+42470743 MS.gene80329:CDS
CTATCATTGACTGATGCTAT+TGG 0.289689 2.4:+42475233 MS.gene80329:CDS
TATATTGCAGGAGTCATATC+TGG 0.292199 2.4:+42471021 MS.gene80329:intron
TTGTGCTTCTGCCGGTAATA+AGG 0.293595 2.4:+42474783 MS.gene80329:CDS
CAACAAAAGTTTCTTTCTTC+CGG 0.310092 2.4:-42474566 None:intergenic
CTTGCTTTCTCTGCTGGAAT+TGG 0.312834 2.4:+42470749 MS.gene80329:CDS
TTTCTCTTTGGCTATGATAC+TGG 0.318446 2.4:+42470776 MS.gene80329:CDS
GCATCTCCAACTAGAGTTAG+AGG 0.333352 2.4:+42473394 MS.gene80329:CDS
TCCAAAGCAGTTCTATAATC+AGG 0.333874 2.4:-42474706 None:intergenic
CATGGAACTGTTCCCATTCC+TGG 0.335209 2.4:-42475107 None:intergenic
AATGGTTGGCTAGCACTAAT+TGG 0.340967 2.4:+42475056 MS.gene80329:CDS
TGGTGTTGGAATGGCTTCAA+TGG 0.344762 2.4:+42473348 MS.gene80329:CDS
GATGCTTCTGAGATGTATAA+AGG 0.345808 2.4:-42473376 None:intergenic
TTGCCAAAACTTAAAATTCA+AGG 0.346391 2.4:-42475381 None:intergenic
GGTAGAGTCTTTGTTGGTCT+TGG 0.353726 2.4:+42473328 MS.gene80329:CDS
CCCTGATTATAGAACTGCTT+TGG 0.353928 2.4:+42474705 MS.gene80329:CDS
GTTTGAAGACGAATCGTCTT+TGG 0.354902 2.4:-42474308 None:intergenic
TTGATCTTCTGTTGTGTCAT+TGG 0.360078 2.4:-42474982 None:intergenic
GAATAGCATCAACATCAAAT+TGG 0.360652 2.4:+42475180 MS.gene80329:CDS
ACAGCTGGAATTAATGCATT+TGG 0.366265 2.4:+42474511 MS.gene80329:CDS
AAAGCAGAGACATCAGCTTC+AGG 0.373152 2.4:-42470680 None:intergenic
TGCTTTGGATGCTGCTCAAT+GGG 0.381660 2.4:+42474720 MS.gene80329:CDS
AACATCCACCTCCATGTTCC+TGG 0.382267 2.4:-42473993 None:intergenic
GGATGGATCAACGATCGATT+TGG 0.391210 2.4:+42473214 MS.gene80329:CDS
CCTTTCCTATGTTATCAACT+TGG 0.391524 2.4:+42473462 MS.gene80329:CDS
GAGAATGAGTAGTAGTTTGA+TGG 0.394666 2.4:-42474639 None:intergenic
AACCTTTCTGAACAACCAAC+GGG 0.395585 2.4:-42474078 None:intergenic
AATCCAGCTATTCTCATTGT+TGG 0.399302 2.4:+42473307 MS.gene80329:CDS
CCATTCCTGGTGAGAAGAAT+AGG 0.401944 2.4:-42475094 None:intergenic
GAGAATGTTTGTCTCTATCA+TGG 0.407356 2.4:+42470705 MS.gene80329:CDS
ATTGTTGGTAGAGTCTTTGT+TGG 0.407548 2.4:+42473322 MS.gene80329:CDS
ATTATTGTGCAGCTATTACC+TGG 0.408857 2.4:+42474945 MS.gene80329:intron
GGAGCACTTGTTAGTCTCAA+TGG 0.411851 2.4:+42473415 MS.gene80329:CDS
GAAGCACAAAATCCACATTC+AGG 0.414289 2.4:-42474769 None:intergenic
GTCTTTGTTGGTCTTGGTGT+TGG 0.414920 2.4:+42473334 MS.gene80329:CDS
TGTTGGTCTTGGTGTTGGAA+TGG 0.433663 2.4:+42473339 MS.gene80329:CDS
ATGTTCTCAACCTCTTCAAT+AGG 0.434255 2.4:-42475344 None:intergenic
GGATTGCATGAAATGTCTTA+AGG 0.435473 2.4:+42474741 MS.gene80329:CDS
GCTTTCTCTGCTGGAATTGG+TGG 0.439243 2.4:+42470752 MS.gene80329:CDS
ATGCTTCTGAGATGTATAAA+GGG 0.442480 2.4:-42473375 None:intergenic
GGAACATGGAGGTGGATGTT+AGG 0.444072 2.4:+42473996 MS.gene80329:CDS
CCTATTCTTCTCACCAGGAA+TGG 0.445918 2.4:+42475094 MS.gene80329:CDS
ATAGTGAGTACAGCACTTGC+AGG 0.446111 2.4:+42473166 MS.gene80329:CDS
TGCAAGTGCTGTACTCACTA+TGG 0.452107 2.4:-42473164 None:intergenic
CAAATCTTCCAACAATTTGT+CGG 0.457080 2.4:+42474400 MS.gene80329:CDS
CTCAATGGATTTCTCATCAC+TGG 0.458618 2.4:+42473430 MS.gene80329:CDS
ACAACCAACGGGGCGATTCT+GGG 0.459626 2.4:-42474067 None:intergenic
TCTAAAAGAATCAGTCGAAA+TGG 0.461701 2.4:+42474282 MS.gene80329:CDS
GCACTTGCAGGAGCAATCAT+AGG 0.463105 2.4:+42473178 MS.gene80329:CDS
ATTTCATCTTCAACATCTTG+TGG 0.465872 2.4:-42474253 None:intergenic
AAAGCAAGACGAAGAACATA+AGG 0.466895 2.4:-42470734 None:intergenic
AAGCAGAGACATCAGCTTCA+GGG 0.467694 2.4:-42470679 None:intergenic
GCCCCGTTGGTTGTTCAGAA+AGG 0.467718 2.4:+42474076 MS.gene80329:CDS
GTATATAAGAGATGATTTCA+AGG 0.469865 2.4:+42471053 MS.gene80329:CDS
CTATTCTTCTCACCAGGAAT+GGG 0.473967 2.4:+42475095 MS.gene80329:CDS
ATTTCAGAGTTTACAACCCA+TGG 0.480742 2.4:-42475125 None:intergenic
CCAACCATCGTTCAACTAGC+TGG 0.480899 2.4:+42474448 MS.gene80329:CDS
CTGCTTTGGATGCTGCTCAA+TGG 0.483187 2.4:+42474719 MS.gene80329:CDS
CTACCAACAATGAGAATAGC+TGG 0.488214 2.4:-42473310 None:intergenic
CTTCTGTCACTTGTCACAGC+TGG 0.488504 2.4:+42474496 MS.gene80329:CDS
GTTAGGTGTTGCAGCAGTAC+CGG 0.491713 2.4:+42474013 MS.gene80329:CDS
AGTGCTCCTCTAACTCTAGT+TGG 0.492861 2.4:-42473400 None:intergenic
GTAAGAAGAGGTTTATATGC+AGG 0.494340 2.4:+42474367 MS.gene80329:CDS
TGTTAATTGTTGAAAATGGA+AGG 0.498558 2.4:+42470650 None:intergenic
TGTTGATTCCGACAAATTGT+TGG 0.502638 2.4:-42474408 None:intergenic
AACTACTACTCATTCTCCTA+TGG 0.507137 2.4:+42474645 MS.gene80329:CDS
GGTTGGACTGTAGTACATTA+CGG 0.509940 2.4:-42474431 None:intergenic
AAGAGATGATTTCAAGGCTG+TGG 0.514067 2.4:+42471059 MS.gene80329:CDS
ATACTATTTGTTCAGGCACC+AGG 0.520848 2.4:+42473975 MS.gene80329:intron
CAGGAATGGGAACAGTTCCA+TGG 0.531089 2.4:+42475108 MS.gene80329:CDS
ATATTGCAGGAGTCATATCT+GGG 0.531606 2.4:+42471022 MS.gene80329:intron
TTGTTCAGGCACCAGGAACA+TGG 0.534777 2.4:+42473982 MS.gene80329:intron
CTTAAGGCTTCTCCTGAATG+TGG 0.537074 2.4:+42474757 MS.gene80329:CDS
TTATTGTGCAGCTATTACCT+GGG 0.538946 2.4:+42474946 MS.gene80329:intron
CATCTTCAACATCTTGTGGA+GGG 0.542544 2.4:-42474249 None:intergenic
TGCTCCCAGAATCGCCCCGT+TGG 0.552374 2.4:+42474063 MS.gene80329:CDS
GTTTCAATTTCACTAACCAT+AGG 0.554411 2.4:-42474661 None:intergenic
TAACCTTTCTGAACAACCAA+CGG 0.556181 2.4:-42474079 None:intergenic
TTAAGATACAGAGGAATATG+TGG 0.557495 2.4:+42475155 MS.gene80329:CDS
TGAAGAGGTTGAGAACATGT+TGG 0.558714 2.4:+42475349 MS.gene80329:CDS
ATCATAGGTGCATCAGTTGG+TGG 0.558750 2.4:+42473193 MS.gene80329:CDS
AATACGATTTGTGTTAAAGC+CGG 0.560109 2.4:-42474032 None:intergenic
AGGCACCAGGAACATGGAGG+TGG 0.563216 2.4:+42473988 MS.gene80329:intron
TAGGTGCATCAGTTGGTGGA+TGG 0.568470 2.4:+42473197 MS.gene80329:CDS
CCAAAGCAGTTCTATAATCA+GGG 0.569226 2.4:-42474705 None:intergenic
CCAGCTAGTTGAACGATGGT+TGG 0.571403 2.4:-42474448 None:intergenic
AAAGGGACTTCCTATTGAAG+AGG 0.575338 2.4:+42475334 MS.gene80329:CDS
AATGGATTTCTCATCACTGG+TGG 0.583065 2.4:+42473433 MS.gene80329:CDS
GGATAGACAAACTTGGCTGC+AGG 0.583346 2.4:+42471080 MS.gene80329:CDS
TCATCTTCAACATCTTGTGG+AGG 0.583395 2.4:-42474250 None:intergenic
CCAAGTTGATAACATAGGAA+AGG 0.589390 2.4:-42473462 None:intergenic
AAAACCAAAACAGTAAGAAG+AGG 0.592751 2.4:+42474355 MS.gene80329:CDS
AAGAGGTTTATATGCAGGAG+TGG 0.592816 2.4:+42474372 MS.gene80329:CDS
AGGAATGGGAACAGTTCCAT+GGG 0.596384 2.4:+42475109 MS.gene80329:CDS
TACATCCTATTCTTCTCACC+AGG 0.604815 2.4:+42475089 MS.gene80329:CDS
GAATGCCAAGTTGATAACAT+AGG 0.609558 2.4:-42473467 None:intergenic
AGAGGTTTATATGCAGGAGT+GGG 0.619234 2.4:+42474373 MS.gene80329:CDS
GGATCAACGATCGATTTGGA+AGG 0.624011 2.4:+42473218 MS.gene80329:CDS
GCAATCATAGGTGCATCAGT+TGG 0.630415 2.4:+42473190 MS.gene80329:CDS
TAATTGTTGAAAATGGAAGG+AGG 0.631537 2.4:+42470653 None:intergenic
AACAAGAGAGACAATAACAC+CGG 0.634530 2.4:-42474599 None:intergenic
TGCTTCTGAGATGTATAAAG+GGG 0.637478 2.4:-42473374 None:intergenic
TTGGATATCAGACATGCCCC+AGG 0.638173 2.4:-42474963 None:intergenic
AGGCTGTGGATAGACAAACT+TGG 0.642933 2.4:+42471073 MS.gene80329:CDS
AGTCGACAATGGTACACAAG+AGG 0.654966 2.4:+42475020 MS.gene80329:CDS
AGATACAGAGGAATATGTGG+AGG 0.659965 2.4:+42475158 MS.gene80329:CDS
TATTGTGCAGCTATTACCTG+GGG 0.660927 2.4:+42474947 MS.gene80329:intron
ATATATCCATTAAGATACAG+AGG 0.661567 2.4:+42475146 MS.gene80329:CDS
TTCAGGCACCAGGAACATGG+AGG 0.710504 2.4:+42473985 MS.gene80329:intron
ACCTTTCTGAACAACCAACG+GGG 0.711240 2.4:-42474077 None:intergenic
AAAACCAGCTAGTTGAACGA+TGG 0.712111 2.4:-42474452 None:intergenic
TATTGCAGGAGTCATATCTG+GGG 0.745900 2.4:+42471023 MS.gene80329:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTATGGTTTAATAAA+AGG + chr2.4:42471352-42471371 MS.gene80329:intron 10.0%
!! TTGTATTTAATTATGTATTA+GGG - chr2.4:42472807-42472826 None:intergenic 10.0%
!! TTTGTATTTAATTATGTATT+AGG - chr2.4:42472808-42472827 None:intergenic 10.0%
!!! TAATCAATCTTTTTTTATAA+AGG - chr2.4:42471767-42471786 None:intergenic 10.0%
!!! TTTTCCAATATTTATTTTTT+TGG + chr2.4:42472772-42472791 MS.gene80329:intron 10.0%
!! ACAAAATAAAATCTACAAAA+TGG - chr2.4:42472327-42472346 None:intergenic 15.0%
!! TACACCAAAAAAATAAATAT+TGG - chr2.4:42472779-42472798 None:intergenic 15.0%
!! TATTATAGACCAAATATATT+TGG + chr2.4:42471190-42471209 MS.gene80329:intron 15.0%
!! TCAATTCAGTATATTATATA+CGG + chr2.4:42471601-42471620 MS.gene80329:intron 15.0%
!!! CATGAAAATAATAATTTGTT+AGG + chr2.4:42471982-42472001 MS.gene80329:intron 15.0%
!!! CTAACAAATTATTATTTTCA+TGG - chr2.4:42471984-42472003 None:intergenic 15.0%
!!! GATATGTTTTATTTTCAAAA+GGG + chr2.4:42472596-42472615 MS.gene80329:intron 15.0%
!!! TAATTTTTTAGATGCAATAA+AGG - chr2.4:42471461-42471480 None:intergenic 15.0%
!!! TCTTTTGTTTTTATTATTGA+GGG + chr2.4:42472407-42472426 MS.gene80329:intron 15.0%
!!! TGATATGTTTTATTTTCAAA+AGG + chr2.4:42472595-42472614 MS.gene80329:intron 15.0%
!!! TTCTTTTGTTTTTATTATTG+AGG + chr2.4:42472406-42472425 MS.gene80329:intron 15.0%
!! AAAAAATGTTACCTTATTAC+CGG - chr2.4:42474797-42474816 None:intergenic 20.0%
!! AAAAACAATGACAAAAACAA+TGG - chr2.4:42475303-42475322 None:intergenic 20.0%
!! AACATGATTAAAATCATTCA+TGG + chr2.4:42472914-42472933 MS.gene80329:intron 20.0%
!! AATGGATAAATATTGTCTAA+CGG - chr2.4:42472488-42472507 None:intergenic 20.0%
!! AGTTAGTTATATATTTCCTT+CGG + chr2.4:42471117-42471136 MS.gene80329:intron 20.0%
!! ATTGTAATAAAAAACATCAG+TGG - chr2.4:42471696-42471715 None:intergenic 20.0%
!! CATTGAATACCAAATATATT+TGG - chr2.4:42471202-42471221 None:intergenic 20.0%
!! GAACTTATTAATTAAGTGAA+AGG + chr2.4:42473049-42473068 MS.gene80329:intron 20.0%
!! TATATGTTAAACGAAAAACA+GGG + chr2.4:42474187-42474206 MS.gene80329:intron 20.0%
!! TTATATGTTAAACGAAAAAC+AGG + chr2.4:42474186-42474205 MS.gene80329:intron 20.0%
!!! AAGTTTTTTGTGTTTCTTTT+TGG - chr2.4:42472150-42472169 None:intergenic 20.0%
!!! ATATATTTTATTGACAAGAC+CGG + chr2.4:42474547-42474566 MS.gene80329:CDS 20.0%
!!! ATCATTTGAGTTAAGTTTAT+GGG - chr2.4:42472077-42472096 None:intergenic 20.0%
!!! ATGAAAATGGTTTTATCAAT+TGG - chr2.4:42473677-42473696 None:intergenic 20.0%
!!! ATTAATTAATGATGGGTATT+TGG + chr2.4:42470997-42471016 MS.gene80329:intron 20.0%
!!! ATTTCCATATTTTTTCTTCT+TGG - chr2.4:42471637-42471656 None:intergenic 20.0%
!!! CAATTTTAAGTTGTTTCTAT+AGG + chr2.4:42471564-42471583 MS.gene80329:intron 20.0%
!!! CACTTAGTATTTTATTTGAA+AGG - chr2.4:42474830-42474849 None:intergenic 20.0%
!!! TATCATTTGAGTTAAGTTTA+TGG - chr2.4:42472078-42472097 None:intergenic 20.0%
!!! TGTTGGTAACAATTTTAAAA+TGG - chr2.4:42472506-42472525 None:intergenic 20.0%
!!! TTAAGCTTTAGTTAGTAATA+TGG - chr2.4:42470868-42470887 None:intergenic 20.0%
!!! TTAATTAATGATGGGTATTT+GGG + chr2.4:42470998-42471017 MS.gene80329:intron 20.0%
!!! TTAATTGATGTTGATAAATC+AGG + chr2.4:42473138-42473157 MS.gene80329:intron 20.0%
!!! TTTGACAATTTGTTTATAAG+TGG - chr2.4:42472987-42473006 None:intergenic 20.0%
! AAAGCCAAGAAGAAAAAATA+TGG + chr2.4:42471630-42471649 MS.gene80329:intron 25.0%
! AAATTGAGAAAACTATCACA+AGG - chr2.4:42471550-42471569 None:intergenic 25.0%
! AAGGTAAAATGGTTATAAAG+GGG - chr2.4:42471494-42471513 None:intergenic 25.0%
! ACAAAATGGTTTGAGAAATA+AGG - chr2.4:42472313-42472332 None:intergenic 25.0%
! AGTGAAAGGTAAATAAGATA+AGG + chr2.4:42473063-42473082 MS.gene80329:intron 25.0%
! ATATATCCATTAAGATACAG+AGG + chr2.4:42475146-42475165 MS.gene80329:CDS 25.0%
! ATTAAAATCATTCATGGACA+CGG + chr2.4:42472920-42472939 MS.gene80329:intron 25.0%
! CAAGGTAAAATGGTTATAAA+GGG - chr2.4:42471495-42471514 None:intergenic 25.0%
! GACAATACATAATATATGCA+AGG + chr2.4:42474882-42474901 MS.gene80329:intron 25.0%
! GCTAAGTATTAGACATATTT+GGG + chr2.4:42473868-42473887 MS.gene80329:intron 25.0%
! GGAATAGTTAGGATATATTA+TGG + chr2.4:42471340-42471359 MS.gene80329:intron 25.0%
! GTATATAAGAGATGATTTCA+AGG + chr2.4:42471053-42471072 MS.gene80329:CDS 25.0%
! TAACTCCAATCACATTAATA+GGG - chr2.4:42471233-42471252 None:intergenic 25.0%
! TACCAACATAAATTATGTAG+TGG + chr2.4:42472518-42472537 MS.gene80329:intron 25.0%
! TATAATATACTGAATTGACC+AGG - chr2.4:42471599-42471618 None:intergenic 25.0%
! TCACTTACTCAATCAAATAA+GGG + chr2.4:42472208-42472227 MS.gene80329:intron 25.0%
! TCGAAAATATGTCATGAAAA+TGG - chr2.4:42473690-42473709 None:intergenic 25.0%
! TGCTTTACTTAACTTTCATT+TGG + chr2.4:42474162-42474181 MS.gene80329:intron 25.0%
! TTGCCAAAACTTAAAATTCA+AGG - chr2.4:42475384-42475403 None:intergenic 25.0%
! TTGTTTGATACTATTTGTTC+AGG + chr2.4:42473968-42473987 MS.gene80329:intron 25.0%
!! AAGAAGCTAAAGAAATTTTG+AGG + chr2.4:42474218-42474237 MS.gene80329:CDS 25.0%
!! ACATTTTATAAACCAAGATG+TGG - chr2.4:42471801-42471820 None:intergenic 25.0%
!! CACTTTTGACACATTTATAT+AGG + chr2.4:42472702-42472721 MS.gene80329:intron 25.0%
!! TATGATAGTATGCTTTTGTA+AGG + chr2.4:42472169-42472188 MS.gene80329:intron 25.0%
!! TCAGTATTGTTATTAGACAT+TGG - chr2.4:42474926-42474945 None:intergenic 25.0%
!! TCATTTGAGTTAAGTTTATG+GGG - chr2.4:42472076-42472095 None:intergenic 25.0%
!! TTTGATGTTCTGAATTTAGA+AGG - chr2.4:42472450-42472469 None:intergenic 25.0%
!! TTTTGACACATTTATATAGG+AGG + chr2.4:42472705-42472724 MS.gene80329:intron 25.0%
!! TTTTTCCCTATTAATGTGAT+TGG + chr2.4:42471225-42471244 MS.gene80329:intron 25.0%
!!! AAAAGAATGTGTCATTTTGA+TGG + chr2.4:42475435-42475454 MS.gene80329:CDS 25.0%
!!! AATTTAACCATTAGCTTTGA+TGG + chr2.4:42471319-42471338 MS.gene80329:intron 25.0%
!!! AGATGCAATAAAGGTATTTT+TGG - chr2.4:42471452-42471471 None:intergenic 25.0%
!!! GAACCTTGAATTTTAAGTTT+TGG + chr2.4:42475378-42475397 MS.gene80329:CDS 25.0%
!!! GTATCTTTATCCATTTTAGT+TGG + chr2.4:42471253-42471272 MS.gene80329:intron 25.0%
!!! GTTAGTTTTACCATCTAAAA+AGG - chr2.4:42472897-42472916 None:intergenic 25.0%
!!! TAGTTTTTTATTGGCATCAA+TGG - chr2.4:42471518-42471537 None:intergenic 25.0%
!!! TGAATTTTAAGTTTTGGCAA+AGG + chr2.4:42475384-42475403 MS.gene80329:CDS 25.0%
!!! TGCTTGTGTTAGTTTTTTAT+TGG - chr2.4:42471527-42471546 None:intergenic 25.0%
AAAAATTACGCATAAGTCGA+AGG + chr2.4:42472843-42472862 MS.gene80329:intron 30.0%
AAAACCAAAACAGTAAGAAG+AGG + chr2.4:42474355-42474374 MS.gene80329:CDS 30.0%
AAATAGATTACATGCAGTCA+TGG - chr2.4:42474121-42474140 None:intergenic 30.0%
AAATATTGTCTAACGGTCTA+CGG - chr2.4:42472481-42472500 None:intergenic 30.0%
AAATTATGTAGTGGCAAAGA+TGG + chr2.4:42472527-42472546 MS.gene80329:intron 30.0%
AACTATTCCATCAAAGCTAA+TGG - chr2.4:42471329-42471348 None:intergenic 30.0%
AACTATTGCCCAAAAATTCA+AGG - chr2.4:42472261-42472280 None:intergenic 30.0%
AATACGATTTGTGTTAAAGC+CGG - chr2.4:42474035-42474054 None:intergenic 30.0%
AATTATGTAGTGGCAAAGAT+GGG + chr2.4:42472528-42472547 MS.gene80329:intron 30.0%
AGCTGGTGATTAATTAATGA+TGG + chr2.4:42470989-42471008 MS.gene80329:intron 30.0%
ATAGAAACTATTTAGATCCG+AGG + chr2.4:42473814-42473833 MS.gene80329:intron 30.0%
ATTTCATCTTCAACATCTTG+TGG - chr2.4:42474256-42474275 None:intergenic 30.0%
CAAATCTTCCAACAATTTGT+CGG + chr2.4:42474400-42474419 MS.gene80329:CDS 30.0%
CAACAAAAGTTTCTTTCTTC+CGG - chr2.4:42474569-42474588 None:intergenic 30.0%
CAACATATATCATGTACTCA+TGG - chr2.4:42471901-42471920 None:intergenic 30.0%
CACATTTATATAGGAGGAAT+AGG + chr2.4:42472711-42472730 MS.gene80329:intron 30.0%
CATATAATAATCTCTCGAGT+CGG - chr2.4:42471422-42471441 None:intergenic 30.0%
CATATTCCTCTGTATCTTAA+TGG - chr2.4:42475155-42475174 None:intergenic 30.0%
CATGAGTACATGATATATGT+TGG + chr2.4:42471899-42471918 MS.gene80329:intron 30.0%
CTAACTCCAATCACATTAAT+AGG - chr2.4:42471234-42471253 None:intergenic 30.0%
CTCACTTACTCAATCAAATA+AGG + chr2.4:42472207-42472226 MS.gene80329:intron 30.0%
GAATAGCATCAACATCAAAT+TGG + chr2.4:42475180-42475199 MS.gene80329:CDS 30.0%
GCAAGGTAAAATGGTTATAA+AGG - chr2.4:42471496-42471515 None:intergenic 30.0%
GCTGGTGATTAATTAATGAT+GGG + chr2.4:42470990-42471009 MS.gene80329:intron 30.0%
GGCTAAGTATTAGACATATT+TGG + chr2.4:42473867-42473886 MS.gene80329:intron 30.0%
TACATAATATATGCAAGGTC+CGG + chr2.4:42474887-42474906 MS.gene80329:intron 30.0%
TAGGAGGAATAGGATTAATA+AGG + chr2.4:42472721-42472740 MS.gene80329:intron 30.0%
TATGCAGTTCTCATTGTAAA+AGG - chr2.4:42473604-42473623 None:intergenic 30.0%
TATTGTTATACATGATCGTC+AGG + chr2.4:42472954-42472973 MS.gene80329:intron 30.0%
TCTAAAAGAATCAGTCGAAA+TGG + chr2.4:42474282-42474301 MS.gene80329:CDS 30.0%
TGCATAATATATGCAAGATC+CGG + chr2.4:42472105-42472124 MS.gene80329:intron 30.0%
TGCATATTTGTAGTGTGATT+CGG + chr2.4:42473618-42473637 MS.gene80329:intron 30.0%
TGCCACTACATAATTTATGT+TGG - chr2.4:42472523-42472542 None:intergenic 30.0%
TGTTAGAATCAGCAATATCA+AGG - chr2.4:42473777-42473796 None:intergenic 30.0%
TTAAGATACAGAGGAATATG+TGG + chr2.4:42475155-42475174 MS.gene80329:CDS 30.0%
TTTAAGTGTGTTTATGAGTC+AGG - chr2.4:42473546-42473565 None:intergenic 30.0%
! ATAGTATGCTTTTGTAAGGT+TGG + chr2.4:42472173-42472192 MS.gene80329:intron 30.0%
! GTCTAACACCTTGAATTTTT+GGG + chr2.4:42472250-42472269 MS.gene80329:intron 30.0%
! TAAACCTCTTCTTACTGTTT+TGG - chr2.4:42474362-42474381 None:intergenic 30.0%
! TGTCTAACACCTTGAATTTT+TGG + chr2.4:42472249-42472268 MS.gene80329:intron 30.0%
! TTCTTTGGTCTGTATTTTCA+AGG - chr2.4:42471937-42471956 None:intergenic 30.0%
!! ACAATAAAAAGTGTTAGAGC+TGG + chr2.4:42470972-42470991 MS.gene80329:intron 30.0%
!! ATGCTTCTGAGATGTATAAA+GGG - chr2.4:42473378-42473397 None:intergenic 30.0%
!! CGGTTTTATAAAGTTGAGTT+AGG - chr2.4:42473504-42473523 None:intergenic 30.0%
!! TGGTTTTGCATCAAACAAAA+CGG + chr2.4:42474468-42474487 MS.gene80329:CDS 30.0%
!! TTAGCTTTGATGGAATAGTT+AGG + chr2.4:42471329-42471348 MS.gene80329:intron 30.0%
!!! AAACTTTTTCATCCACATCT+TGG + chr2.4:42471786-42471805 MS.gene80329:intron 30.0%
!!! CTTTTGTTGTTTAGTTTGTC+CGG + chr2.4:42474580-42474599 MS.gene80329:CDS 30.0%
!!! TTTTTTATGAATGAGACCGA+AGG - chr2.4:42471136-42471155 None:intergenic 30.0%
AAAAAGAGCAAAGTCGACAA+TGG + chr2.4:42475009-42475028 MS.gene80329:CDS 35.0%
AAAGCAAGACGAAGAACATA+AGG - chr2.4:42470737-42470756 None:intergenic 35.0%
AACAAGAGAGACAATAACAC+CGG - chr2.4:42474602-42474621 None:intergenic 35.0%
AATCCAGCTATTCTCATTGT+TGG + chr2.4:42473307-42473326 MS.gene80329:CDS 35.0%
AATTGAGGTGACCTAATAGA+AGG + chr2.4:42473648-42473667 MS.gene80329:intron 35.0%
ACAGCTGGAATTAATGCATT+TGG + chr2.4:42474511-42474530 MS.gene80329:CDS 35.0%
ACATAATATATGCAAGGTCC+GGG + chr2.4:42474888-42474907 MS.gene80329:intron 35.0%
ATATTGCAGGAGTCATATCT+GGG + chr2.4:42471022-42471041 MS.gene80329:intron 35.0%
ATGTTCTCAACCTCTTCAAT+AGG - chr2.4:42475347-42475366 None:intergenic 35.0%
ATTATTGTGCAGCTATTACC+TGG + chr2.4:42474945-42474964 MS.gene80329:intron 35.0%
ATTTCAGAGTTTACAACCCA+TGG - chr2.4:42475128-42475147 None:intergenic 35.0%
CATAATATATGCAAGATCCG+GGG + chr2.4:42472107-42472126 MS.gene80329:intron 35.0%
CATAGTGTGTCCAACTAAAA+TGG - chr2.4:42471266-42471285 None:intergenic 35.0%
CCAAAGCAGTTCTATAATCA+GGG - chr2.4:42474708-42474727 None:intergenic 35.0%
CCTTTCCTATGTTATCAACT+TGG + chr2.4:42473462-42473481 MS.gene80329:CDS 35.0%
CGAGTCGGATAATATTGTAT+CGG - chr2.4:42471407-42471426 None:intergenic 35.0%
GAGAATGAGTAGTAGTTTGA+TGG - chr2.4:42474642-42474661 None:intergenic 35.0%
GAGAATGTTTGTCTCTATCA+TGG + chr2.4:42470705-42470724 MS.gene80329:CDS 35.0%
GCATAATATATGCAAGATCC+GGG + chr2.4:42472106-42472125 MS.gene80329:intron 35.0%
GGATTGCATGAAATGTCTTA+AGG + chr2.4:42474741-42474760 MS.gene80329:CDS 35.0%
GTAAGAAGAGGTTTATATGC+AGG + chr2.4:42474367-42474386 MS.gene80329:CDS 35.0%
TAACCTTTCTGAACAACCAA+CGG - chr2.4:42474082-42474101 None:intergenic 35.0%
TACCATCTAAAAAGGCTTAG+CGG - chr2.4:42472889-42472908 None:intergenic 35.0%
TACTCAATCAAATAAGGGTG+TGG + chr2.4:42472213-42472232 MS.gene80329:intron 35.0%
TATATTGCAGGAGTCATATC+TGG + chr2.4:42471021-42471040 MS.gene80329:intron 35.0%
TCAATTGGTCACCTTCTATT+AGG - chr2.4:42473662-42473681 None:intergenic 35.0%
TCCAAAGCAGTTCTATAATC+AGG - chr2.4:42474709-42474728 None:intergenic 35.0%
TTATTGTGCAGCTATTACCT+GGG + chr2.4:42474946-42474965 MS.gene80329:intron 35.0%
TTCTATAGGAAAACGTAACC+TGG + chr2.4:42471578-42471597 MS.gene80329:intron 35.0%
TTCTATTAGGTCACCTCAAT+TGG - chr2.4:42473649-42473668 None:intergenic 35.0%
TTGATCTTCTGTTGTGTCAT+TGG - chr2.4:42474985-42475004 None:intergenic 35.0%
TTTCTCTTTGGCTATGATAC+TGG + chr2.4:42470776-42470795 MS.gene80329:CDS 35.0%
! ATTCAAGGTGTTAGACAGTT+CGG - chr2.4:42472246-42472265 None:intergenic 35.0%
! ATTGTTGGTAGAGTCTTTGT+TGG + chr2.4:42473322-42473341 MS.gene80329:CDS 35.0%
! CTATCATTGACTGATGCTAT+TGG + chr2.4:42475233-42475252 MS.gene80329:CDS 35.0%
! GTTTTTGTGCCAGAAACAAA+GGG + chr2.4:42475317-42475336 MS.gene80329:CDS 35.0%
! TATTTGTAGTGTGATTCGGA+TGG + chr2.4:42473622-42473641 MS.gene80329:intron 35.0%
! TTTTATTGGCATCAATGGCA+AGG - chr2.4:42471513-42471532 None:intergenic 35.0%
!! ATTTTTGGGCAATAGTTGTG+TGG + chr2.4:42472264-42472283 MS.gene80329:intron 35.0%
!! CCAAGTTGATAACATAGGAA+AGG - chr2.4:42473465-42473484 None:intergenic 35.0%
!! GAATGCCAAGTTGATAACAT+AGG - chr2.4:42473470-42473489 None:intergenic 35.0%
!! GATGCTTCTGAGATGTATAA+AGG - chr2.4:42473379-42473398 None:intergenic 35.0%
!! TGCTTCTGAGATGTATAAAG+GGG - chr2.4:42473377-42473396 None:intergenic 35.0%
!! TGTTGATTCCGACAAATTGT+TGG - chr2.4:42474411-42474430 None:intergenic 35.0%
!! TGTTTTTGTGCCAGAAACAA+AGG + chr2.4:42475316-42475335 MS.gene80329:CDS 35.0%
!! TTTCATTGGCTCAGTTGTTA+TGG + chr2.4:42473273-42473292 MS.gene80329:CDS 35.0%
!!! ATTGTCGACTTTGCTCTTTT+TGG - chr2.4:42475010-42475029 None:intergenic 35.0%
AAAACCAGCTAGTTGAACGA+TGG - chr2.4:42474455-42474474 None:intergenic 40.0%
AAAGGGACTTCCTATTGAAG+AGG + chr2.4:42475334-42475353 MS.gene80329:CDS 40.0%
AACCTTTCTGAACAACCAAC+GGG - chr2.4:42474081-42474100 None:intergenic 40.0%
AAGAGATGATTTCAAGGCTG+TGG + chr2.4:42471059-42471078 MS.gene80329:CDS 40.0%
AAGAGGTTTATATGCAGGAG+TGG + chr2.4:42474372-42474391 MS.gene80329:CDS 40.0%
AATCGATGTGACCTTTATCG+CGG + chr2.4:42473742-42473761 MS.gene80329:intron 40.0%
AGAGGATGTCCAAGCAAAAA+TGG + chr2.4:42475038-42475057 MS.gene80329:CDS 40.0%
AGAGGTTTATATGCAGGAGT+GGG + chr2.4:42474373-42474392 MS.gene80329:CDS 40.0%
AGATACAGAGGAATATGTGG+AGG + chr2.4:42475158-42475177 MS.gene80329:CDS 40.0%
AGGTGTGACTCATCATCTTA+GGG + chr2.4:42473834-42473853 MS.gene80329:intron 40.0%
ATACTATTTGTTCAGGCACC+AGG + chr2.4:42473975-42473994 MS.gene80329:intron 40.0%
ATCATCTTAGGGAGATCCAT+CGG + chr2.4:42473845-42473864 MS.gene80329:intron 40.0%
ATGTCTAATACTTAGCCCGA+TGG - chr2.4:42473864-42473883 None:intergenic 40.0%
CATCTTCAACATCTTGTGGA+GGG - chr2.4:42474252-42474271 None:intergenic 40.0%
CCCTGATTATAGAACTGCTT+TGG + chr2.4:42474705-42474724 MS.gene80329:CDS 40.0%
CTACCAACAATGAGAATAGC+TGG - chr2.4:42473313-42473332 None:intergenic 40.0%
CTATTCTTCTCACCAGGAAT+GGG + chr2.4:42475095-42475114 MS.gene80329:CDS 40.0%
GAAGCACAAAATCCACATTC+AGG - chr2.4:42474772-42474791 None:intergenic 40.0%
GACACTGACGACATACATAT+CGG - chr2.4:42473524-42473543 None:intergenic 40.0%
GATGTCCAAGCAAAAATGGT+TGG + chr2.4:42475042-42475061 MS.gene80329:CDS 40.0%
GCATCAATGGCAAGGTAAAA+TGG - chr2.4:42471505-42471524 None:intergenic 40.0%
GGTTGGACTGTAGTACATTA+CGG - chr2.4:42474434-42474453 None:intergenic 40.0%
GTCGGATAATATTGTATCGG+AGG - chr2.4:42471404-42471423 None:intergenic 40.0%
GTTTGAAGACGAATCGTCTT+TGG - chr2.4:42474311-42474330 None:intergenic 40.0%
TAAGATGATGAGTCACACCT+CGG - chr2.4:42473834-42473853 None:intergenic 40.0%
TACATCCTATTCTTCTCACC+AGG + chr2.4:42475089-42475108 MS.gene80329:CDS 40.0%
TATTGCAGGAGTCATATCTG+GGG + chr2.4:42471023-42471042 MS.gene80329:intron 40.0%
TATTGTGCAGCTATTACCTG+GGG + chr2.4:42474947-42474966 MS.gene80329:intron 40.0%
TCATCTTCAACATCTTGTGG+AGG - chr2.4:42474253-42474272 None:intergenic 40.0%
TGAAGAGGTTGAGAACATGT+TGG + chr2.4:42475349-42475368 MS.gene80329:CDS 40.0%
TGGGTATTTGGGTATATTGC+AGG + chr2.4:42471009-42471028 MS.gene80329:intron 40.0%
! AATGGATTTCTCATCACTGG+TGG + chr2.4:42473433-42473452 MS.gene80329:CDS 40.0%
! AATGGTTGGCTAGCACTAAT+TGG + chr2.4:42475056-42475075 MS.gene80329:CDS 40.0%
! ATAGGAAGTCCCTTTGTTTC+TGG - chr2.4:42475329-42475348 None:intergenic 40.0%
! CTCAATGGATTTCTCATCAC+TGG + chr2.4:42473430-42473449 MS.gene80329:CDS 40.0%
! CTTTTGCATAAGATCAGCAG+AGG - chr2.4:42472662-42472681 None:intergenic 40.0%
! TTCAAGGTGTTAGACAGTTC+GGG - chr2.4:42472245-42472264 None:intergenic 40.0%
!! GCAGATGCACTCTTTTTCAT+TGG + chr2.4:42473259-42473278 MS.gene80329:CDS 40.0%
!! GGAATTGGTGGTTTTCTCTT+TGG + chr2.4:42470764-42470783 MS.gene80329:CDS 40.0%
AAAGCAGAGACATCAGCTTC+AGG - chr2.4:42470683-42470702 None:intergenic 45.0%
AAGCAGAGACATCAGCTTCA+GGG - chr2.4:42470682-42470701 None:intergenic 45.0%
ACCTTTCTGAACAACCAACG+GGG - chr2.4:42474080-42474099 None:intergenic 45.0%
AGGAATGGGAACAGTTCCAT+GGG + chr2.4:42475109-42475128 MS.gene80329:CDS 45.0%
AGGCTGTGGATAGACAAACT+TGG + chr2.4:42471073-42471092 MS.gene80329:CDS 45.0%
AGTCGACAATGGTACACAAG+AGG + chr2.4:42475020-42475039 MS.gene80329:CDS 45.0%
AGTGCTCCTCTAACTCTAGT+TGG - chr2.4:42473403-42473422 None:intergenic 45.0%
ATAGTGAGTACAGCACTTGC+AGG + chr2.4:42473166-42473185 MS.gene80329:CDS 45.0%
ATCATAGGTGCATCAGTTGG+TGG + chr2.4:42473193-42473212 MS.gene80329:CDS 45.0%
ATGCAGTCATGGACGATGTT+AGG - chr2.4:42474110-42474129 None:intergenic 45.0%
CCATTCCTGGTGAGAAGAAT+AGG - chr2.4:42475097-42475116 None:intergenic 45.0%
CCTATTCTTCTCACCAGGAA+TGG + chr2.4:42475094-42475113 MS.gene80329:CDS 45.0%
CTTAAGGCTTCTCCTGAATG+TGG + chr2.4:42474757-42474776 MS.gene80329:CDS 45.0%
CTTGCTTTCTCTGCTGGAAT+TGG + chr2.4:42470749-42470768 MS.gene80329:CDS 45.0%
GAGGTGTGACTCATCATCTT+AGG + chr2.4:42473833-42473852 MS.gene80329:intron 45.0%
GCAATCATAGGTGCATCAGT+TGG + chr2.4:42473190-42473209 MS.gene80329:CDS 45.0%
GCATCTCCAACTAGAGTTAG+AGG + chr2.4:42473394-42473413 MS.gene80329:CDS 45.0%
GGATGGATCAACGATCGATT+TGG + chr2.4:42473214-42473233 MS.gene80329:CDS 45.0%
GGTTTATGCAACCGCGATAA+AGG - chr2.4:42473756-42473775 None:intergenic 45.0%
TCATCTTAGGGAGATCCATC+GGG + chr2.4:42473846-42473865 MS.gene80329:intron 45.0%
TTGTGCTTCTGCCGGTAATA+AGG + chr2.4:42474783-42474802 MS.gene80329:CDS 45.0%
! GGAGCACTTGTTAGTCTCAA+TGG + chr2.4:42473415-42473434 MS.gene80329:CDS 45.0%
! GGTAGAGTCTTTGTTGGTCT+TGG + chr2.4:42473328-42473347 MS.gene80329:CDS 45.0%
! TGATTCGGATGGTCCAATTG+AGG + chr2.4:42473633-42473652 MS.gene80329:intron 45.0%
! TGCAAGTGCTGTACTCACTA+TGG - chr2.4:42473167-42473186 None:intergenic 45.0%
! TGCTTTGGATGCTGCTCAAT+GGG + chr2.4:42474720-42474739 MS.gene80329:CDS 45.0%
! TGGTGTTGGAATGGCTTCAA+TGG + chr2.4:42473348-42473367 MS.gene80329:CDS 45.0%
! TGTATCGGAGGAAGCATGAT+TGG - chr2.4:42471392-42471411 None:intergenic 45.0%
! TGTGGATTTTGTGCTTCTGC+CGG + chr2.4:42474775-42474794 MS.gene80329:CDS 45.0%
!! GCTAGCCAACCATTTTTGCT+TGG - chr2.4:42475050-42475069 None:intergenic 45.0%
!! GGATCAACGATCGATTTGGA+AGG + chr2.4:42473218-42473237 MS.gene80329:CDS 45.0%
!! GTCTTTGTTGGTCTTGGTGT+TGG + chr2.4:42473334-42473353 MS.gene80329:CDS 45.0%
!! TGTTGGTCTTGGTGTTGGAA+TGG + chr2.4:42473339-42473358 MS.gene80329:CDS 45.0%
!! TGTAATTATTAAAAATATAA+AGG - chr2.4:42472362-42472381 None:intergenic 5.0%
!!! TTATTTTTTATTTTATTCTT+TGG - chr2.4:42471952-42471971 None:intergenic 5.0%
AACATCCACCTCCATGTTCC+TGG - chr2.4:42473996-42474015 None:intergenic 50.0%
AGGTGTTAGACAGTTCGGGA+AGG - chr2.4:42472241-42472260 None:intergenic 50.0%
CAAGGTCCGGGTTCAAATCT+CGG + chr2.4:42474900-42474919 MS.gene80329:intron 50.0%
CAGGAATGGGAACAGTTCCA+TGG + chr2.4:42475108-42475127 MS.gene80329:CDS 50.0%
CATGGAACTGTTCCCATTCC+TGG - chr2.4:42475110-42475129 None:intergenic 50.0%
CATTGGCCGAGATTTGAACC+CGG - chr2.4:42474909-42474928 None:intergenic 50.0%
CCAACCATCGTTCAACTAGC+TGG + chr2.4:42474448-42474467 MS.gene80329:CDS 50.0%
CCAGCTAGTTGAACGATGGT+TGG - chr2.4:42474451-42474470 None:intergenic 50.0%
CTTCGTCTTGCTTTCTCTGC+TGG + chr2.4:42470743-42470762 MS.gene80329:CDS 50.0%
GCACTTGCAGGAGCAATCAT+AGG + chr2.4:42473178-42473197 MS.gene80329:CDS 50.0%
GCTTTCTCTGCTGGAATTGG+TGG + chr2.4:42470752-42470771 MS.gene80329:CDS 50.0%
GGAACATGGAGGTGGATGTT+AGG + chr2.4:42473996-42474015 MS.gene80329:CDS 50.0%
GGATAGACAAACTTGGCTGC+AGG + chr2.4:42471080-42471099 MS.gene80329:CDS 50.0%
GGTGTTAGACAGTTCGGGAA+GGG - chr2.4:42472240-42472259 None:intergenic 50.0%
TCGTGTCTAGATTCGAACCC+CGG - chr2.4:42472127-42472146 None:intergenic 50.0%
TGAGCTTAGCTCAGCTGGTA+AGG + chr2.4:42474860-42474879 MS.gene80329:intron 50.0%
TTGGATATCAGACATGCCCC+AGG - chr2.4:42474966-42474985 None:intergenic 50.0%
TTGTTCAGGCACCAGGAACA+TGG + chr2.4:42473982-42474001 MS.gene80329:intron 50.0%
! CGCCGCTAAGCCTTTTTAGA+TGG + chr2.4:42472884-42472903 MS.gene80329:intron 50.0%
! CTGCTTTGGATGCTGCTCAA+TGG + chr2.4:42474719-42474738 MS.gene80329:CDS 50.0%
! CTTCTGTCACTTGTCACAGC+TGG + chr2.4:42474496-42474515 MS.gene80329:CDS 50.0%
! GTTAGGTGTTGCAGCAGTAC+CGG + chr2.4:42474013-42474032 MS.gene80329:CDS 50.0%
!! TAGGTGCATCAGTTGGTGGA+TGG + chr2.4:42473197-42473216 MS.gene80329:CDS 50.0%
AACAACCAACGGGGCGATTC+TGG - chr2.4:42474071-42474090 None:intergenic 55.0%
ACAACCAACGGGGCGATTCT+GGG - chr2.4:42474070-42474089 None:intergenic 55.0%
TTCAGGCACCAGGAACATGG+AGG + chr2.4:42473985-42474004 MS.gene80329:intron 55.0%
! GCCCCGTTGGTTGTTCAGAA+AGG + chr2.4:42474076-42474095 MS.gene80329:CDS 55.0%
AGGCACCAGGAACATGGAGG+TGG + chr2.4:42473988-42474007 MS.gene80329:intron 60.0%
CCAGCTGAGCTAAGCTCACG+AGG - chr2.4:42474858-42474877 None:intergenic 60.0%
CCTCGTGAGCTTAGCTCAGC+TGG + chr2.4:42474855-42474874 MS.gene80329:intron 60.0%
TGCTCCCAGAATCGCCCCGT+TGG + chr2.4:42474063-42474082 MS.gene80329:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 42470665 42475454 42470665 ID=MS.gene80329
chr2.4 mRNA 42470665 42475454 42470665 ID=MS.gene80329.t1;Parent=MS.gene80329
chr2.4 exon 42470665 42470797 42470665 ID=MS.gene80329.t1.exon1;Parent=MS.gene80329.t1
chr2.4 CDS 42470665 42470797 42470665 ID=cds.MS.gene80329.t1;Parent=MS.gene80329.t1
chr2.4 exon 42471031 42471101 42471031 ID=MS.gene80329.t1.exon2;Parent=MS.gene80329.t1
chr2.4 CDS 42471031 42471101 42471031 ID=cds.MS.gene80329.t1;Parent=MS.gene80329.t1
chr2.4 exon 42473160 42473495 42473160 ID=MS.gene80329.t1.exon3;Parent=MS.gene80329.t1
chr2.4 CDS 42473160 42473495 42473160 ID=cds.MS.gene80329.t1;Parent=MS.gene80329.t1
chr2.4 exon 42473990 42474097 42473990 ID=MS.gene80329.t1.exon4;Parent=MS.gene80329.t1
chr2.4 CDS 42473990 42474097 42473990 ID=cds.MS.gene80329.t1;Parent=MS.gene80329.t1
chr2.4 exon 42474208 42474804 42474208 ID=MS.gene80329.t1.exon5;Parent=MS.gene80329.t1
chr2.4 CDS 42474208 42474804 42474208 ID=cds.MS.gene80329.t1;Parent=MS.gene80329.t1
chr2.4 exon 42474957 42475454 42474957 ID=MS.gene80329.t1.exon6;Parent=MS.gene80329.t1
chr2.4 CDS 42474957 42475454 42474957 ID=cds.MS.gene80329.t1;Parent=MS.gene80329.t1
Gene Sequence

>MS.gene80329

ATGGAAGGAGGAGTCCCTGAAGCTGATGTCTCTGCTTTCAGAGAATGTTTGTCTCTATCATGGAAAAATCCTTATGTTCTTCGTCTTGCTTTCTCTGCTGGAATTGGTGGTTTTCTCTTTGGCTATGATACTGGTAAATAATATAAAAAAATAATTCATATCTATATAACTAGTTTTTTTTTTTTTTTTTAATATAATATCCATATTACTAACTAAAGCTTAAATAAACTATTTCTCTGTTTAACTTTTATTTATTTTAATAAATTCTCTTCTAAACAATAATTTATTTTAATAAATTCTCTTCTAAACAATAAAAAGTGTTAGAGCTGGTGATTAATTAATGATGGGTATTTGGGTATATTGCAGGAGTCATATCTGGGGCTCTTTTGTATATAAGAGATGATTTCAAGGCTGTGGATAGACAAACTTGGCTGCAGGTAATGTTCATAAAAAGTTAGTTATATATTTCCTTCGGTCTCATTCATAAAAAAAAAATTGTTTCAGATTCGTTGAATATTTGATATATATTATAGACCAAATATATTTGGTATTCAATGAGTTTTTTCCCTATTAATGTGATTGGAGTTAGTATCTTTATCCATTTTAGTTGGACACACTATGTTTTTTCTTGTTTCTAGTCATTTTTTTTTCAACAATTTAACCATTAGCTTTGATGGAATAGTTAGGATATATTATGGTTTAATAAAAGGTTCTAAGTTTGAGTCCAATCATGCTTCCTCCGATACAATATTATCCGACTCGAGAGATTATTATATGTTACACGCCAAAAATACCTTTATTGCATCTAAAAAATTATTTGACAATACCCCTTTATAACCATTTTACCTTGCCATTGATGCCAATAAAAAACTAACACAAGCACCTTGTGATAGTTTTCTCAATTTTAAGTTGTTTCTATAGGAAAACGTAACCTGGTCAATTCAGTATATTATATACGGTCATGAAAAGCCAAGAAGAAAAAATATGGAAATAGTTTAACACATTTATCATTCATGATTTTCGTTATACCACTGATGTTTTTTATTACAATTTAAATTTAAATCACATACATAATTCAATAAGTTTGTGCAGATATAGTCCTTTATAAAAAAAGATTGATTAAACTTTTTCATCCACATCTTGGTTTATAAAATGTTATGTCAAAATCTCAGCATTATTTATAGCACGTGTATAGTACATTAAAGTAAAACATAATGTATTGAAACGTCAAAACCATGAGTACATGATATATGTTGGCATTAGAAGTCACCTTGAAAATACAGACCAAAGAATAAAATAAAAAATAAAAAGAGTCTCCATGAAAATAATAATTTGTTAGGTTAACAAAATAAAATATTCATATTTTAATGATAAATTCGTTTATTGTATTGATACACAAAAAACTTGTCCCCATAAACTTAACTCAAATGATAAGAACAATGCATAATATATGCAAGATCCGGGGTTCGAATCTAGACACGACCAAAAAGAAACACAAAAAACTTATGATAGTATGCTTTTGTAAGGTTGGTGAATTTTATTCTCACTTACTCAATCAAATAAGGGTGTGGTCCCTTCCCGAACTGTCTAACACCTTGAATTTTTGGGCAATAGTTGTGTGGTCATAGATAGTTCTGAATTCAATCCTTATTTCTCAAACCATTTTGTAGATTTTATTTTGTAGTTTTCAATCTCCTTTATATTTTTAATAATTACATAACATCAATTACATTTTTTTTCGTTCTTTTGTTTTTATTATTGAGGGTACAAGAGAAGCTTTAGCCTTCTAAATTCAGAACATCAAAAATCATAACCGTAGACCGTTAGACAATATTTATCCATTTTAAAATTGTTACCAACATAAATTATGTAGTGGCAAAGATGGGTACACAAATGCGACATAACATGAGCAAGAACATAATAACTTTTTTGATATGTTTTATTTTCAAAAGGGAGAAAAAAATATGAAGTTTATGTTACATAACTCACTTCTTCCTCTGCTGATCTTATGCAAAAGAAAAAATATACAAGTTTTGACACTTTTGACACATTTATATAGGAGGAATAGGATTAATAAGGTGAAACAATAATCACTTCTAATTCTTTATTTTCCAATATTTATTTTTTTGGTGTATTTTTCCCTAATACATAATTAAATACAAATATTTATATATATACAAAAATTACGCATAAGTCGAAGGCAAGCGAGCAACAAGCTGCGCCGCTAAGCCTTTTTAGATGGTAAAACTAACATGATTAAAATCATTCATGGACACGGAAGACATAATATATTGTTATACATGATCGTCAGGATTGCATCCACTTATAAACAAATTGTCAAATATTTATATAGTGAAATGTGATTACATTTTAAATTCTGAGTTGAACTTATTAATTAAGTGAAAGGTAAATAAGATAAGGTTACATTTGTATGCTAATTTCATTATCACAACAACTATATTATAATGATTACTTAATTGATGTTGATAAATCAGGAAGCCATAGTGAGTACAGCACTTGCAGGAGCAATCATAGGTGCATCAGTTGGTGGATGGATCAACGATCGATTTGGAAGGAAAAAAGCAATAATTCTTGCAGATGCACTCTTTTTCATTGGCTCAGTTGTTATGGCTGCTGCAATCAATCCAGCTATTCTCATTGTTGGTAGAGTCTTTGTTGGTCTTGGTGTTGGAATGGCTTCAATGGCTTCCCCTTTATACATCTCAGAAGCATCTCCAACTAGAGTTAGAGGAGCACTTGTTAGTCTCAATGGATTTCTCATCACTGGTGGACAATTCCTTTCCTATGTTATCAACTTGGCATTCACAAATGTGAGCCTAACTCAACTTTATAAAACCGATATGTATGTCGTCAGTGTCCTGACTCATAAACACACTTAAATGCTATATTTCATCGAATGTGAGATTCTTAACACACCTTTTACAATGAGAACTGCATATTTGTAGTGTGATTCGGATGGTCCAATTGAGGTGACCTAATAGAAGGTGACCAATTGATAAAACCATTTTCATGACATATTTTCGAATGTGAAACTCTTAATAGTGATGAGCAAATGCAATCGATGTGACCTTTATCGCGGTTGCATAAACCTTGATATTGCTGATTCTAACAAACTACGACTCATCATAATAGAAACTATTTAGATCCGAGGTGTGACTCATCATCTTAGGGAGATCCATCGGGCTAAGTATTAGACATATTTGGGTCATAAGATTTTTTTCAACTTTTAATTGCTTTGTCTAAAATGTTTATTTTTGTACAAACTATAATTGTGTAACTTGATTGTTTGATACTATTTGTTCAGGCACCAGGAACATGGAGGTGGATGTTAGGTGTTGCAGCAGTACCGGCTTTAACACAAATCGTATTGATGCTTATGCTCCCAGAATCGCCCCGTTGGTTGTTCAGAAAGGTTAATTCTCCTAACATCGTCCATGACTGCATGTAATCTATTTTCTTTTCTTTGCAAAATGTGTTGCTTTACTTAACTTTCATTTGGCTTATATGTTAAACGAAAAACAGGGAAAAGAAGAAGAAGCTAAAGAAATTTTGAGGAAGATATACCCTCCACAAGATGTTGAAGATGAAATCATTGCTCTAAAAGAATCAGTCGAAATGGAAACCAAAGACGATTCGTCTTCAAACAAAGTCAGCATTATCAAACTTCTGAAAACCAAAACAGTAAGAAGAGGTTTATATGCAGGAGTGGGACTACAAATCTTCCAACAATTTGTCGGAATCAACACCGTAATGTACTACAGTCCAACCATCGTTCAACTAGCTGGTTTTGCATCAAACAAAACGGCACTTCTTCTGTCACTTGTCACAGCTGGAATTAATGCATTTGGTTCGATTTTGAGCATATATTTTATTGACAAGACCGGAAGAAAGAAACTTTTGTTGTTTAGTTTGTCCGGTGTTATTGTCTCTCTTGTTGTTTTGACTGTCGTGTTCCATCAAACTACTACTCATTCTCCTATGGTTAGTGAAATTGAAACTTCTAAGTTCAATAATACTTGCCCTGATTATAGAACTGCTTTGGATGCTGCTCAATGGGATTGCATGAAATGTCTTAAGGCTTCTCCTGAATGTGGATTTTGTGCTTCTGCCGGTAATAAGGTAACATTTTTTTTTAATCTTTCCTTTCAAATAAAATACTAAGTGTTTGTCCTCGTGAGCTTAGCTCAGCTGGTAAGGACAATACATAATATATGCAAGGTCCGGGTTCAAATCTCGGCCAATGTCTAATAACAATACTGATTATTGTGCAGCTATTACCTGGGGCATGTCTGATATCCAATGACACAACAGAAGATCAATGCCAAAAAGAGCAAAGTCGACAATGGTACACAAGAGGATGTCCAAGCAAAAATGGTTGGCTAGCACTAATTGGTCTTTCACTATACATCCTATTCTTCTCACCAGGAATGGGAACAGTTCCATGGGTTGTAAACTCTGAAATATATCCATTAAGATACAGAGGAATATGTGGAGGAATAGCATCAACATCAAATTGGATTTCAAATCTCATTGTTGCACAATCTTTTCTATCATTGACTGATGCTATTGGAACTTCATACACATTCATGATATTCATTTTCATCACTGTTGCTGCCATTGTTTTTGTCATTGTTTTTGTGCCAGAAACAAAGGGACTTCCTATTGAAGAGGTTGAGAACATGTTGGAAAGAAGAACCTTGAATTTTAAGTTTTGGCAAAGGAATTCTGACTCTGATCAAGCATTGACTCAAAAGAATGTGTCATTTTGA
Protein sequence

>MS.gene80329.t1

MEGGVPEADVSAFRECLSLSWKNPYVLRLAFSAGIGGFLFGYDTGVISGALLYIRDDFKAVDRQTWLQEAIVSTALAGAIIGASVGGWINDRFGRKKAIILADALFFIGSVVMAAAINPAILIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNGFLITGGQFLSYVINLAFTNAPGTWRWMLGVAAVPALTQIVLMLMLPESPRWLFRKGKEEEAKEILRKIYPPQDVEDEIIALKESVEMETKDDSSSNKVSIIKLLKTKTVRRGLYAGVGLQIFQQFVGINTVMYYSPTIVQLAGFASNKTALLLSLVTAGINAFGSILSIYFIDKTGRKKLLLFSLSGVIVSLVVLTVVFHQTTTHSPMVSEIETSKFNNTCPDYRTALDAAQWDCMKCLKASPECGFCASAGNKLLPGACLISNDTTEDQCQKEQSRQWYTRGCPSKNGWLALIGLSLYILFFSPGMGTVPWVVNSEIYPLRYRGICGGIASTSNWISNLIVAQSFLSLTDAIGTSYTFMIFIFITVAAIVFVIVFVPETKGLPIEEVENMLERRTLNFKFWQRNSDSDQALTQKNVSF