AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055946


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055946.t1 MTR_7g094110 98.105 475 9 0 1 475 3 477 0.0 937
MS.gene055946.t1 MTR_7g094110 94.105 475 8 1 1 475 3 457 0.0 889
MS.gene055946.t1 MTR_7g094450 90.316 475 46 0 1 475 1 475 0.0 871
MS.gene055946.t1 MTR_4g118610 56.790 486 199 3 1 475 3 488 0.0 566
MS.gene055946.t1 MTR_2g020710 55.901 483 205 3 1 475 3 485 0.0 548
MS.gene055946.t1 MTR_2g020710 58.838 396 162 1 81 475 1 396 1.28e-166 475
MS.gene055946.t1 MTR_7g113970 51.087 460 211 1 30 475 38 497 7.22e-166 478
MS.gene055946.t1 MTR_7g113960 53.580 433 199 1 42 474 29 459 2.49e-165 475
MS.gene055946.t1 MTR_4g118610 51.885 451 188 4 1 440 3 435 2.38e-161 464
MS.gene055946.t1 MTR_2g020710 54.657 408 177 3 1 400 3 410 1.82e-155 448
MS.gene055946.t1 MTR_2g020710 54.791 407 176 3 1 399 3 409 3.88e-155 447
MS.gene055946.t1 MTR_2g020710 55.014 369 158 3 1 361 3 371 2.21e-140 408
MS.gene055946.t1 MTR_8g077310 43.210 486 256 5 1 470 1 482 2.87e-138 407
MS.gene055946.t1 MTR_1g022315 46.296 432 226 2 45 470 54 485 6.38e-135 398
MS.gene055946.t1 MTR_5g020270 40.947 486 265 6 3 470 4 485 2.27e-134 397
MS.gene055946.t1 MTR_8g077300 41.350 474 267 4 9 472 4 476 1.98e-125 374
MS.gene055946.t1 MTR_5g020270 39.381 485 253 7 3 470 4 464 4.57e-122 365
MS.gene055946.t1 MTR_8g077310 45.478 387 202 3 91 470 1 385 3.02e-118 352
MS.gene055946.t1 MTR_1g022315 45.337 386 205 2 91 470 1 386 5.42e-118 351
MS.gene055946.t1 MTR_7g113960 51.906 341 162 1 42 382 29 367 7.24e-117 348
MS.gene055946.t1 MTR_7g113970 48.501 367 175 1 30 382 38 404 7.65e-116 347
MS.gene055946.t1 MTR_5g020270 42.377 387 214 3 91 470 1 385 1.38e-112 337
MS.gene055946.t1 MTR_8g077310 41.371 394 217 4 1 384 1 390 2.10e-100 307
MS.gene055946.t1 MTR_7g094420 75.641 156 17 1 283 438 1 135 2.28e-74 230
MS.gene055946.t1 MTR_6g018790 31.448 442 283 8 46 475 111 544 1.96e-60 207
MS.gene055946.t1 MTR_4g077740 30.522 498 302 13 4 471 15 498 2.33e-60 206
MS.gene055946.t1 MTR_1g116660 33.592 387 236 7 100 470 98 479 1.89e-59 203
MS.gene055946.t1 MTR_7g446340 29.350 477 299 12 22 470 33 499 2.64e-58 201
MS.gene055946.t1 MTR_6g007340 29.350 477 299 12 22 470 33 499 2.64e-58 201
MS.gene055946.t1 MTR_7g082270 30.317 442 286 8 46 474 71 503 1.40e-57 198
MS.gene055946.t1 MTR_7g005910 33.419 389 237 8 98 470 94 476 1.23e-54 190
MS.gene055946.t1 MTR_3g084110 31.618 408 246 9 84 469 75 471 1.06e-52 185
MS.gene055946.t1 MTR_1g116650 32.461 382 230 7 102 470 143 509 4.30e-52 184
MS.gene055946.t1 MTR_4g069500 28.364 483 310 8 22 472 12 490 9.76e-52 183
MS.gene055946.t1 MTR_7g082270 31.429 385 243 7 46 418 71 446 1.24e-51 182
MS.gene055946.t1 MTR_4g069500 29.519 437 272 8 68 472 8 440 1.97e-51 181
MS.gene055946.t1 MTR_3g116240 30.206 437 267 8 68 470 56 488 3.34e-51 181
MS.gene055946.t1 MTR_2g013310 28.395 486 328 6 2 470 15 497 1.22e-50 180
MS.gene055946.t1 MTR_7g021390 76.724 116 8 2 360 475 47 143 5.55e-50 167
MS.gene055946.t1 MTR_2g013310 29.524 420 276 6 68 470 8 424 9.14e-50 176
MS.gene055946.t1 MTR_7g118110 66.892 148 6 3 261 408 130 234 3.25e-49 172
MS.gene055946.t1 MTR_5g075300 29.253 482 301 13 21 470 6 479 9.03e-46 166
MS.gene055946.t1 MTR_7g094430 88.506 87 10 0 156 242 52 138 2.45e-44 154
MS.gene055946.t1 MTR_7g094430 93.548 31 2 0 78 108 143 173 6.30e-11 62.0
MS.gene055946.t1 MTR_6g088450 27.505 469 313 7 23 465 35 502 3.73e-44 162
MS.gene055946.t1 MTR_4g072030 28.899 436 275 10 68 472 55 486 3.22e-42 157
MS.gene055946.t1 MTR_3g074270 29.146 398 257 6 80 469 82 462 6.21e-42 155
MS.gene055946.t1 MTR_8g077890 28.758 459 289 12 44 470 27 479 2.29e-41 154
MS.gene055946.t1 MTR_3g074390 29.136 405 269 8 80 469 87 488 5.50e-41 154
MS.gene055946.t1 MTR_4g013205 30.621 467 300 11 27 475 14 474 2.57e-40 151
MS.gene055946.t1 MTR_6g087910 27.846 492 308 11 2 473 22 486 6.30e-40 150
MS.gene055946.t1 MTR_3g074410 28.079 406 274 7 80 470 84 486 1.05e-39 150
MS.gene055946.t1 MTR_5g077580 26.667 495 243 13 84 474 73 551 1.88e-39 150
MS.gene055946.t1 MTR_0204s0040 28.536 403 271 7 80 469 88 486 2.50e-39 149
MS.gene055946.t1 MTR_4g116770 28.536 403 271 7 80 469 284 682 7.40e-39 150
MS.gene055946.t1 MTR_8g103500 28.348 448 281 12 52 471 34 469 1.63e-38 146
MS.gene055946.t1 MTR_3g023480 27.764 407 275 8 80 470 82 485 2.26e-38 146
MS.gene055946.t1 MTR_3g007910 26.652 469 297 10 27 469 6 453 5.07e-38 145
MS.gene055946.t1 MTR_8g102860 28.536 403 272 7 80 469 34 433 2.57e-37 142
MS.gene055946.t1 MTR_8g102860 27.331 472 303 12 34 469 18 485 3.56e-37 143
MS.gene055946.t1 MTR_4g116790 28.288 403 272 6 80 469 86 484 4.03e-37 143
MS.gene055946.t1 MTR_0009s0370 28.676 408 270 9 80 470 82 485 4.54e-37 142
MS.gene055946.t1 MTR_5g019870 26.697 442 279 11 68 471 43 477 5.01e-37 142
MS.gene055946.t1 MTR_5g006070 25.799 407 287 5 80 473 35 439 6.09e-36 139
MS.gene055946.t1 MTR_1g104750 26.536 407 284 6 80 473 83 487 7.35e-36 139
MS.gene055946.t1 MTR_0204s0020 27.792 403 270 8 82 469 79 475 9.25e-36 139
MS.gene055946.t1 MTR_0204s0020 27.792 403 270 8 82 469 82 478 1.04e-35 139
MS.gene055946.t1 MTR_5g006070 25.799 407 287 5 80 473 83 487 1.21e-35 139
MS.gene055946.t1 MTR_1g038630 27.155 464 303 8 40 470 23 484 1.48e-35 138
MS.gene055946.t1 MTR_1g104780 26.471 408 283 6 80 473 83 487 2.30e-35 138
MS.gene055946.t1 MTR_3g093010 28.079 406 273 7 80 469 83 485 3.44e-35 137
MS.gene055946.t1 MTR_2g049020 29.942 344 218 8 35 359 22 361 4.66e-35 138
MS.gene055946.t1 MTR_2g049020 41.000 100 56 2 373 470 452 550 1.29e-14 76.6
MS.gene055946.t1 MTR_3g093060 28.362 409 268 7 80 469 36 438 5.43e-35 136
MS.gene055946.t1 MTR_1g104770 27.603 413 276 9 78 473 82 488 1.04e-34 136
MS.gene055946.t1 MTR_1g038600 27.193 456 295 8 40 470 23 466 1.27e-34 135
MS.gene055946.t1 MTR_4g069500 30.897 301 179 7 197 472 5 301 2.17e-34 132
MS.gene055946.t1 MTR_5g041550 28.117 409 269 8 80 469 84 486 3.18e-34 135
MS.gene055946.t1 MTR_3g080240 26.362 459 302 10 38 475 90 533 8.44e-34 134
MS.gene055946.t1 MTR_6g087040 25.118 422 292 9 69 469 67 485 2.94e-33 132
MS.gene055946.t1 MTR_6g088375 25.118 422 292 9 69 469 67 485 2.94e-33 132
MS.gene055946.t1 MTR_4g064820 28.675 415 251 12 24 400 79 486 1.02e-32 130
MS.gene055946.t1 MTR_7g091690 27.000 400 277 7 82 469 88 484 9.49e-32 127
MS.gene055946.t1 MTR_4g091370 27.344 384 256 7 105 470 108 486 1.29e-31 127
MS.gene055946.t1 MTR_2g048720 29.670 273 174 5 100 358 89 357 4.36e-31 126
MS.gene055946.t1 MTR_5g082540 26.609 466 303 10 40 470 23 484 2.91e-30 123
MS.gene055946.t1 MTR_4g090600 28.052 385 250 7 105 469 108 485 8.98e-30 122
MS.gene055946.t1 MTR_3g074320 28.223 287 197 3 191 469 31 316 1.28e-29 119
MS.gene055946.t1 MTR_3g008160 26.150 413 272 11 80 470 34 435 1.31e-29 120
MS.gene055946.t1 MTR_3g082920 50.955 157 35 4 289 445 3 117 1.38e-29 120
MS.gene055946.t1 MTR_3g008160 25.553 407 282 8 80 470 83 484 2.19e-29 120
MS.gene055946.t1 MTR_3g074370 28.819 288 194 4 191 469 31 316 2.47e-29 118
MS.gene055946.t1 MTR_3g074340 28.819 288 194 4 191 469 31 316 2.47e-29 118
MS.gene055946.t1 MTR_5g094760 26.000 400 281 7 82 469 88 484 3.04e-29 120
MS.gene055946.t1 MTR_3g008170 27.479 353 238 8 133 470 136 485 6.99e-29 119
MS.gene055946.t1 MTR_3g074380 29.348 276 181 5 80 344 85 357 1.23e-27 114
MS.gene055946.t1 MTR_2g026160 30.070 286 178 7 98 364 88 370 3.25e-26 112
MS.gene055946.t1 MTR_2g026160 35.354 99 63 1 373 470 455 553 2.47e-12 69.3
MS.gene055946.t1 MTR_3g116060 37.297 185 108 3 68 245 32 215 1.55e-25 110
MS.gene055946.t1 MTR_3g116060 31.250 208 126 3 274 467 507 711 2.33e-19 91.7
MS.gene055946.t1 MTR_4g116790 29.710 276 179 5 80 344 86 357 6.59e-25 106
MS.gene055946.t1 MTR_5g044910 29.528 254 153 6 237 467 451 701 2.78e-20 94.7
MS.gene055946.t1 MTR_5g044910 33.333 156 96 3 97 245 63 217 5.71e-17 84.3
MS.gene055946.t1 MTR_3g118530 29.646 226 141 4 257 467 499 721 5.37e-19 90.5
MS.gene055946.t1 MTR_3g118530 33.889 180 108 5 68 237 32 210 6.47e-16 80.9
MS.gene055946.t1 MTR_5g024740 29.741 232 145 5 251 467 475 703 1.94e-18 89.0
MS.gene055946.t1 MTR_5g024740 31.383 188 117 5 68 245 32 217 3.64e-17 84.7
MS.gene055946.t1 MTR_2g026140 27.597 308 178 9 98 383 85 369 8.31e-18 86.7
MS.gene055946.t1 MTR_8g073100 29.327 208 130 4 274 467 495 699 2.84e-17 85.1
MS.gene055946.t1 MTR_8g073100 29.630 189 119 7 68 245 32 217 6.40e-14 74.7
MS.gene055946.t1 MTR_3g118530 33.889 180 108 5 68 237 32 210 6.36e-16 80.9
MS.gene055946.t1 MTR_5g077590 23.148 324 196 8 190 463 66 386 1.44e-15 79.0
MS.gene055946.t1 MTR_3g074400 23.342 407 266 8 80 463 33 416 3.23e-15 77.8
MS.gene055946.t1 MTR_4g064807 39.241 79 47 1 396 473 1 79 3.70e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055946.t1 AT2G48020 70.842 463 130 1 12 474 5 462 0.0 683
MS.gene055946.t1 AT2G48020 70.842 463 130 1 12 474 5 462 0.0 683
MS.gene055946.t1 AT5G18840 56.757 481 199 4 1 474 1 479 0.0 549
MS.gene055946.t1 AT3G05150 55.202 471 204 3 4 473 5 469 0.0 528
MS.gene055946.t1 AT3G05150 55.437 469 202 3 4 471 5 467 0.0 527
MS.gene055946.t1 AT3G05150 55.437 469 202 3 4 471 5 467 0.0 527
MS.gene055946.t1 AT2G48020 69.106 369 109 1 12 380 5 368 0.0 526
MS.gene055946.t1 AT2G48020 69.670 333 96 1 15 347 8 335 1.45e-168 479
MS.gene055946.t1 AT1G54730 53.846 429 198 0 45 473 37 465 1.96e-168 483
MS.gene055946.t1 AT1G54730 55.076 394 177 0 45 438 37 430 6.38e-156 450
MS.gene055946.t1 AT1G54730 51.515 429 187 1 45 473 37 444 3.68e-155 448
MS.gene055946.t1 AT1G08920 44.828 464 253 1 11 474 6 466 1.50e-145 425
MS.gene055946.t1 AT3G05165 44.181 464 254 1 11 474 6 464 1.30e-143 420
MS.gene055946.t1 AT3G05165 44.181 464 254 1 11 474 6 464 1.30e-143 420
MS.gene055946.t1 AT3G05165 44.181 464 254 1 11 474 6 464 1.30e-143 420
MS.gene055946.t1 AT1G54730 52.538 394 166 1 45 438 37 409 8.98e-143 416
MS.gene055946.t1 AT1G08920 44.161 471 253 2 11 474 6 473 9.92e-143 418
MS.gene055946.t1 AT3G05160 44.348 460 251 1 15 474 1 455 4.37e-142 416
MS.gene055946.t1 AT1G08930 46.437 435 233 0 40 474 58 492 6.94e-141 414
MS.gene055946.t1 AT1G08930 46.437 435 233 0 40 474 58 492 6.94e-141 414
MS.gene055946.t1 AT3G20460 44.093 474 254 2 1 474 25 487 1.59e-140 412
MS.gene055946.t1 AT3G05155 44.493 454 248 2 22 474 9 459 8.07e-139 407
MS.gene055946.t1 AT1G19450 43.061 490 255 5 1 471 1 485 1.63e-136 402
MS.gene055946.t1 AT1G54730 53.889 360 166 0 45 404 37 396 1.52e-135 397
MS.gene055946.t1 AT1G54730 53.889 360 166 0 45 404 37 396 1.52e-135 397
MS.gene055946.t1 AT1G75220 43.299 485 260 5 1 471 1 484 3.88e-135 399
MS.gene055946.t1 AT3G05400 45.934 455 240 3 21 470 3 456 1.80e-134 396
MS.gene055946.t1 AT5G27350 43.601 461 257 1 13 473 7 464 3.38e-133 393
MS.gene055946.t1 AT1G08920 44.860 428 233 1 11 438 6 430 1.25e-132 391
MS.gene055946.t1 AT5G27360 43.696 460 257 1 16 473 9 468 2.38e-132 391
MS.gene055946.t1 AT4G04750 43.267 453 253 2 22 472 20 470 6.30e-132 390
MS.gene055946.t1 AT4G04750 43.267 453 253 2 22 472 20 470 6.30e-132 390
MS.gene055946.t1 AT5G27360 43.696 460 257 1 16 473 57 516 9.64e-132 391
MS.gene055946.t1 AT4G04750 43.172 454 254 2 21 472 63 514 1.33e-131 391
MS.gene055946.t1 AT3G05160 46.173 405 218 0 70 474 2 406 8.04e-131 385
MS.gene055946.t1 AT3G05160 46.173 405 218 0 70 474 2 406 8.04e-131 385
MS.gene055946.t1 AT4G04760 44.875 439 237 2 36 471 29 465 3.24e-130 386
MS.gene055946.t1 AT3G05165 43.418 433 240 1 11 443 6 433 6.01e-129 384
MS.gene055946.t1 AT3G05400 44.176 455 228 4 21 470 3 436 1.91e-123 367
MS.gene055946.t1 AT1G54730 51.111 360 155 1 45 404 37 375 2.16e-122 363
MS.gene055946.t1 AT4G04760 45.432 405 218 1 70 471 2 406 3.38e-121 361
MS.gene055946.t1 AT3G05165 42.721 419 235 1 11 429 6 419 2.14e-120 360
MS.gene055946.t1 AT3G05165 42.721 419 235 1 11 429 6 419 2.14e-120 360
MS.gene055946.t1 AT1G08890 39.216 459 275 1 15 473 6 460 1.24e-117 353
MS.gene055946.t1 AT1G54730 56.711 298 129 0 45 342 37 334 8.11e-117 347
MS.gene055946.t1 AT1G08900 41.067 431 254 0 43 473 28 458 1.34e-116 350
MS.gene055946.t1 AT1G08900 41.067 431 254 0 43 473 28 458 1.34e-116 350
MS.gene055946.t1 AT4G04760 43.387 431 234 3 46 471 37 462 4.10e-116 350
MS.gene055946.t1 AT1G08900 41.546 414 242 0 60 473 3 416 2.03e-113 341
MS.gene055946.t1 AT1G08900 40.371 431 249 2 43 473 28 450 4.32e-110 333
MS.gene055946.t1 AT1G54730 56.679 277 120 0 45 321 37 313 9.67e-108 323
MS.gene055946.t1 AT1G54730 56.679 277 120 0 45 321 37 313 9.67e-108 323
MS.gene055946.t1 AT5G27360 43.956 364 204 0 110 473 1 364 3.71e-107 323
MS.gene055946.t1 AT5G27360 43.956 364 204 0 110 473 1 364 3.71e-107 323
MS.gene055946.t1 AT1G08900 41.414 396 232 0 43 438 28 423 4.26e-104 317
MS.gene055946.t1 AT5G27360 41.207 381 222 1 16 394 9 389 3.16e-97 300
MS.gene055946.t1 AT3G05155 43.925 321 177 1 22 342 9 326 1.13e-91 282
MS.gene055946.t1 AT5G17010 32.305 486 285 14 16 471 29 500 3.92e-59 202
MS.gene055946.t1 AT5G17010 32.305 486 285 14 16 471 29 500 3.92e-59 202
MS.gene055946.t1 AT5G17010 32.305 486 285 14 16 471 29 500 3.92e-59 202
MS.gene055946.t1 AT5G16150 30.474 443 286 8 46 475 111 544 2.93e-58 201
MS.gene055946.t1 AT5G16150 30.474 443 286 8 46 475 111 544 2.93e-58 201
MS.gene055946.t1 AT5G16150 30.474 443 286 8 46 475 111 544 2.93e-58 201
MS.gene055946.t1 AT3G03090 31.568 491 302 13 6 471 19 500 4.88e-58 199
MS.gene055946.t1 AT2G43330 33.505 388 236 9 100 470 94 476 3.34e-55 192
MS.gene055946.t1 AT5G59250 32.117 411 247 10 88 473 153 556 6.09e-55 192
MS.gene055946.t1 AT2G20780 27.917 480 323 10 10 470 22 497 4.05e-49 176
MS.gene055946.t1 AT2G20780 29.257 417 277 8 69 470 26 439 3.94e-48 172
MS.gene055946.t1 AT2G16120 28.132 455 281 12 52 470 42 486 2.78e-45 166
MS.gene055946.t1 AT1G67300 30.217 460 269 11 45 475 56 492 1.10e-44 163
MS.gene055946.t1 AT1G67300 30.283 459 269 11 45 475 56 491 1.29e-44 163
MS.gene055946.t1 AT1G67300 30.283 459 269 11 45 475 56 491 1.29e-44 163
MS.gene055946.t1 AT2G16130 27.727 440 276 11 68 471 54 487 3.89e-43 159
MS.gene055946.t1 AT1G05030 29.630 405 262 7 84 475 73 467 4.90e-43 159
MS.gene055946.t1 AT1G05030 29.630 405 262 7 84 475 125 519 1.02e-42 159
MS.gene055946.t1 AT4G36670 28.070 456 281 9 54 471 31 477 2.20e-42 157
MS.gene055946.t1 AT2G18480 27.333 450 289 8 54 470 36 480 4.34e-42 157
MS.gene055946.t1 AT3G18830 26.498 434 286 9 68 470 64 495 6.52e-42 157
MS.gene055946.t1 AT1G79820 29.501 461 292 10 32 473 44 490 8.60e-42 155
MS.gene055946.t1 AT1G79820 29.501 461 292 10 32 473 44 490 8.60e-42 155
MS.gene055946.t1 AT1G67300 31.783 387 242 8 45 418 56 433 9.11e-42 154
MS.gene055946.t1 AT1G67300 31.783 387 242 8 45 418 56 433 9.11e-42 154
MS.gene055946.t1 AT1G67300 32.011 378 235 8 45 409 56 424 1.86e-40 150
MS.gene055946.t1 AT1G67300 32.011 378 235 8 45 409 56 424 1.86e-40 150
MS.gene055946.t1 AT1G79820 30.521 403 252 8 32 418 44 434 3.13e-38 145
MS.gene055946.t1 AT1G50310 27.047 403 280 4 80 469 85 486 3.03e-37 143
MS.gene055946.t1 AT5G26340 26.044 407 286 5 80 473 84 488 7.41e-36 139
MS.gene055946.t1 AT3G19940 26.799 403 280 6 80 469 85 485 1.51e-35 138
MS.gene055946.t1 AT1G11260 26.988 415 266 8 80 469 83 485 9.45e-35 136
MS.gene055946.t1 AT4G21480 28.954 411 263 9 80 470 83 484 1.25e-34 135
MS.gene055946.t1 AT5G17010 26.899 487 250 14 16 471 26 437 1.71e-34 134
MS.gene055946.t1 AT3G19930 27.123 424 289 6 61 470 67 484 2.34e-34 135
MS.gene055946.t1 AT3G19930 27.123 424 289 6 61 470 67 484 2.34e-34 135
MS.gene055946.t1 AT5G23270 27.228 404 278 6 80 469 85 486 1.41e-33 133
MS.gene055946.t1 AT3G05960 28.186 408 274 9 80 473 80 482 1.65e-33 132
MS.gene055946.t1 AT5G26250 27.628 409 275 10 80 473 81 483 2.12e-33 132
MS.gene055946.t1 AT4G02050 26.980 404 272 10 82 469 88 484 2.49e-33 132
MS.gene055946.t1 AT4G02050 26.980 404 272 10 82 469 88 484 2.49e-33 132
MS.gene055946.t1 AT1G07340 29.584 409 260 10 80 469 82 481 3.15e-33 132
MS.gene055946.t1 AT1G50310 26.888 331 228 4 152 469 14 343 5.29e-32 126
MS.gene055946.t1 AT1G30220 29.930 284 183 7 102 370 93 375 5.82e-32 129
MS.gene055946.t1 AT1G30220 36.449 107 59 2 373 474 455 557 9.34e-15 77.0
MS.gene055946.t1 AT1G34580 27.047 403 279 6 82 469 35 437 7.15e-31 124
MS.gene055946.t1 AT1G34580 27.047 403 279 6 82 469 85 487 1.33e-30 124
MS.gene055946.t1 AT1G77210 26.353 425 283 9 69 469 67 485 3.03e-30 123
MS.gene055946.t1 AT1G77210 26.353 425 283 9 69 469 67 485 3.03e-30 123
MS.gene055946.t1 AT2G35740 26.159 302 185 5 84 358 73 363 1.04e-26 114
MS.gene055946.t1 AT2G35740 41.414 99 57 1 373 470 458 556 2.80e-15 79.0
MS.gene055946.t1 AT4G16480 26.715 277 183 5 100 358 90 364 1.28e-25 110
MS.gene055946.t1 AT4G16480 37.374 99 61 1 373 470 459 557 1.83e-14 76.3
MS.gene055946.t1 AT4G16480 26.715 277 183 5 100 358 90 364 1.28e-25 110
MS.gene055946.t1 AT4G16480 37.374 99 61 1 373 470 459 557 1.83e-14 76.3
MS.gene055946.t1 AT4G16480 26.715 277 183 5 100 358 90 364 1.28e-25 110
MS.gene055946.t1 AT4G16480 37.374 99 61 1 373 470 459 557 1.83e-14 76.3
MS.gene055946.t1 AT1G79820 26.247 461 259 11 32 473 44 442 1.22e-23 103
MS.gene055946.t1 AT5G61520 25.814 430 286 12 65 469 18 439 1.52e-23 103
MS.gene055946.t1 AT5G61520 25.814 430 286 12 65 469 66 487 1.71e-23 103
MS.gene055946.t1 AT1G20840 34.595 185 113 3 68 245 32 215 2.32e-23 103
MS.gene055946.t1 AT1G20840 31.250 208 126 3 274 467 509 713 1.54e-18 89.4
MS.gene055946.t1 AT1G20840 34.595 185 113 3 68 245 32 215 2.32e-23 103
MS.gene055946.t1 AT1G20840 31.250 208 126 3 274 467 509 713 1.54e-18 89.4
MS.gene055946.t1 AT1G77210 25.904 332 230 7 151 469 8 336 7.03e-23 100
MS.gene055946.t1 AT3G51490 36.585 164 96 4 89 245 55 217 6.49e-21 96.7
MS.gene055946.t1 AT3G51490 29.134 254 154 6 224 467 469 706 5.45e-17 84.3
MS.gene055946.t1 AT3G51490 36.585 164 96 4 89 245 5 167 6.98e-21 96.3
MS.gene055946.t1 AT3G51490 28.185 259 158 6 224 467 419 664 5.52e-19 90.5
MS.gene055946.t1 AT3G51490 36.585 164 96 4 89 245 55 217 8.05e-21 96.3
MS.gene055946.t1 AT3G51490 28.185 259 158 6 224 467 469 714 7.56e-19 90.1
MS.gene055946.t1 AT4G35300 31.019 216 132 5 266 467 311 523 3.10e-19 90.9
MS.gene055946.t1 AT4G35300 31.019 216 132 5 266 467 498 710 4.47e-19 90.9
MS.gene055946.t1 AT4G35300 36.170 188 108 6 68 245 32 217 1.32e-18 89.4
MS.gene055946.t1 AT4G35300 31.019 216 132 5 266 467 498 710 4.47e-19 90.9
MS.gene055946.t1 AT4G35300 36.170 188 108 6 68 245 32 217 1.32e-18 89.4
MS.gene055946.t1 AT4G35300 31.019 216 132 5 266 467 498 710 4.47e-19 90.9
MS.gene055946.t1 AT4G35300 36.170 188 108 6 68 245 32 217 1.32e-18 89.4
MS.gene055946.t1 AT4G35300 31.019 216 132 5 266 467 508 720 5.07e-19 90.9
MS.gene055946.t1 AT4G35300 36.170 188 108 6 68 245 32 217 1.51e-18 89.4
MS.gene055946.t1 AT4G35300 31.019 216 132 5 266 467 508 720 5.07e-19 90.9
MS.gene055946.t1 AT4G35300 36.170 188 108 6 68 245 32 217 1.51e-18 89.4
MS.gene055946.t1 AT4G35300 31.019 216 132 5 266 467 508 720 5.07e-19 90.9
MS.gene055946.t1 AT4G35300 36.170 188 108 6 68 245 32 217 1.51e-18 89.4
MS.gene055946.t1 AT4G35300 31.019 216 132 5 266 467 508 720 5.07e-19 90.9
MS.gene055946.t1 AT4G35300 36.170 188 108 6 68 245 32 217 1.51e-18 89.4
MS.gene055946.t1 AT4G35300 31.019 216 132 5 266 467 508 720 5.07e-19 90.9
MS.gene055946.t1 AT4G35300 36.170 188 108 6 68 245 32 217 1.51e-18 89.4
MS.gene055946.t1 AT4G35300 31.019 216 132 5 266 467 508 720 5.07e-19 90.9
MS.gene055946.t1 AT4G35300 36.170 188 108 6 68 245 32 217 1.51e-18 89.4
MS.gene055946.t1 AT4G35300 31.019 216 132 5 266 467 508 720 5.07e-19 90.9
MS.gene055946.t1 AT4G35300 36.170 188 108 6 68 245 32 217 1.51e-18 89.4
MS.gene055946.t1 AT1G54730 59.677 62 25 0 91 152 1 62 1.77e-17 77.0

Find 131 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCACTGCTGTGTTGCTTC+TGG 0.130660 7.4:-15001573 MS.gene055946:CDS
CTTATGGTTTGCCAGCAATT+AGG 0.210158 7.4:-15000908 MS.gene055946:CDS
GATATTTCCAGTCAATATTA+AGG 0.214954 7.4:-14999724 MS.gene055946:CDS
CTTGGTTTCGATTAGGTATC+TGG 0.222577 7.4:-15000377 MS.gene055946:intron
GCAAACTTCCTATGCGTTAA+TGG 0.222951 7.4:+14999361 None:intergenic
GTTTGTGGTTCTTATGAATT+TGG 0.236732 7.4:-15002955 MS.gene055946:CDS
TTATGGTTTGCCAGCAATTA+GGG 0.246534 7.4:-15000907 MS.gene055946:CDS
AGGGCACCTCGGAGTTCTTT+TGG 0.268637 7.4:+15001929 None:intergenic
GGTCCAGTGCCTTTGGATAT+TGG 0.272502 7.4:-15002114 MS.gene055946:CDS
CCCACTGCTGTGTTGCTTCT+GGG 0.289747 7.4:-15001572 MS.gene055946:CDS
GTCCAGTGCCTTTGGATATT+GGG 0.296992 7.4:-15002113 MS.gene055946:CDS
GCAACACAGCAGTGGGAATA+AGG 0.301338 7.4:+15001579 None:intergenic
GTATCAGTGTCATTCATAAT+TGG 0.311203 7.4:-15001761 MS.gene055946:CDS
TAAAAGCCTTGAACAATTAC+AGG 0.318980 7.4:-14999387 MS.gene055946:CDS
TTTGGCTCCATCTTGACATT+TGG 0.325417 7.4:-15002455 MS.gene055946:CDS
TTTATAGGGTCCAGTGCCTT+TGG 0.327122 7.4:-15002121 MS.gene055946:intron
TTACCAAAAGTAGGGGCTTC+CGG 0.327819 7.4:+15000476 None:intergenic
GAAGGATCTTAGTCTGTCTT+TGG 0.336829 7.4:-15002745 MS.gene055946:CDS
CTCCAACTCAAGAAGCTATT+AGG 0.337233 7.4:-15002767 MS.gene055946:CDS
AGGCCGGAAGCCCCTACTTT+TGG 0.343569 7.4:-15000479 MS.gene055946:intron
GTCCCAGCACTTGCCGTAAT+CGG 0.344026 7.4:-15000195 MS.gene055946:CDS
ACCACATTCATTGCAGTTTG+TGG 0.345828 7.4:-15002970 MS.gene055946:CDS
CCCCTTTCTTCCAACGAAAT+CGG 0.361829 7.4:+15002397 None:intergenic
TAATTGGAACAGTACTTTCA+TGG 0.363139 7.4:-15001745 MS.gene055946:CDS
GGAATAAGAGAACCATTGAT+AGG 0.364113 7.4:-15003057 MS.gene055946:CDS
GTAGATTGGAGTAGGGCTTA+TGG 0.368425 7.4:-15000924 MS.gene055946:intron
GGGAGACTAGCAACAGGATA+TGG 0.368465 7.4:-15002093 MS.gene055946:CDS
TGAAGAGGCAGAAGAAATTC+AGG 0.379612 7.4:-15001342 MS.gene055946:intron
GCCGATTTCGTTGGAAGAAA+GGG 0.384009 7.4:-15002398 MS.gene055946:CDS
ACTTGCCGTAATCGGCATAT+TGG 0.388619 7.4:-15000187 MS.gene055946:intron
TGGCTGCCTGTAATTGTTCA+AGG 0.392084 7.4:+14999381 None:intergenic
TTCGATTAGGTATCTGGATC+AGG 0.394903 7.4:-15000371 MS.gene055946:intron
TATAATATACGCTATCCTTC+AGG 0.395137 7.4:-15000632 MS.gene055946:intron
CTTCCAACGAAATCGGCAAT+AGG 0.397086 7.4:+15002404 None:intergenic
ATACCTGATTTAAGGTAGTC+AGG 0.404425 7.4:+15001909 None:intergenic
CTCATGAGTTGGAGCTCCTA+TGG 0.410624 7.4:-14999630 MS.gene055946:intron
TAAATGCAGTACTCCTTGTT+TGG 0.414418 7.4:-15002473 MS.gene055946:intron
TTATTACTTACCAGCCATCT+AGG 0.415487 7.4:+15001527 None:intergenic
TTCCTAATAGCTTCTTGAGT+TGG 0.419270 7.4:+15002765 None:intergenic
TGGAGGGCTTTAGCTATAAT+CGG 0.425528 7.4:-15001725 MS.gene055946:intron
CCATACCAATATGCCGATTA+CGG 0.426709 7.4:+15000182 None:intergenic
TGCCCTGACTACCTTAAATC+AGG 0.427867 7.4:-15001912 MS.gene055946:intron
TGAAACAAATCCAGCACCTT+CGG 0.432421 7.4:+15001169 None:intergenic
TCATTCCAGAGTCTCCTAGA+TGG 0.435503 7.4:-15001541 MS.gene055946:CDS
CTTTCAACTTTCTCATGAGT+TGG 0.435734 7.4:-14999641 MS.gene055946:CDS
CTTTAAATTTACCAAAAGTA+GGG 0.436278 7.4:+15000468 None:intergenic
TCTGGATCAGGATTGGTTGC+AGG 0.437259 7.4:-15000359 MS.gene055946:CDS
GCATAGCAACATTAGTGAAC+TGG 0.437404 7.4:-14999689 MS.gene055946:CDS
TGCCGATTTCGTTGGAAGAA+AGG 0.437883 7.4:-15002399 MS.gene055946:CDS
ATGCCGATTACGGCAAGTGC+TGG 0.438063 7.4:+15000192 None:intergenic
CTTCATGAGTAGATTGGAGT+AGG 0.442194 7.4:-15000932 MS.gene055946:intron
ATATTTCCAGTCAATATTAA+GGG 0.442648 7.4:-14999723 MS.gene055946:CDS
GTCAATATTAAGGGGCAGGC+AGG 0.454849 7.4:-14999714 MS.gene055946:CDS
GCTTTAAATTTACCAAAAGT+AGG 0.457971 7.4:+15000467 None:intergenic
ATAGGATTTCCTTCTGCGAC+GGG 0.459192 7.4:-15000658 MS.gene055946:intron
GCAACATTAGTGAACTGGTT+TGG 0.459624 7.4:-14999684 MS.gene055946:CDS
TTGACATTTGGTGCGATGAT+TGG 0.460714 7.4:-15002443 MS.gene055946:CDS
TCCGGCCTGCTCTATCTATG+AGG 0.461836 7.4:+15000494 None:intergenic
CATGAGAAAGTTGAAAGTAT+AGG 0.464787 7.4:+14999647 None:intergenic
TCCAGTCAATATTAAGGGGC+AGG 0.473585 7.4:-14999718 MS.gene055946:CDS
GCTCGCAAAACCGAAGGTGC+TGG 0.477284 7.4:-15001179 MS.gene055946:CDS
CTAGCAACAGGATATGGAAT+GGG 0.490163 7.4:-15002087 MS.gene055946:CDS
GAATAAGAGAACCATTGATA+GGG 0.493005 7.4:-15003056 MS.gene055946:CDS
GCCTGCCCCTTAATATTGAC+TGG 0.493013 7.4:+14999717 None:intergenic
GATGGATATCAAAGAGGATG+TGG 0.494729 7.4:-15003097 MS.gene055946:CDS
GATATTGGGAGACTAGCAAC+AGG 0.513165 7.4:-15002099 MS.gene055946:CDS
ACAGGTTCATGAAGTGGCTG+TGG 0.519075 7.4:-15000223 MS.gene055946:intron
TCCAGAGTCTCCTAGATGGC+TGG 0.523060 7.4:-15001537 MS.gene055946:intron
CAGATTGTGATCACAGGTGT+TGG 0.523824 7.4:-15000523 MS.gene055946:CDS
TTAGGTATCTGGATCAGGAT+TGG 0.526007 7.4:-15000366 MS.gene055946:intron
TGCCGATTACGGCAAGTGCT+GGG 0.527544 7.4:+15000193 None:intergenic
TCTTAGTCTGTCTTTGGCAG+AGG 0.528107 7.4:-15002739 MS.gene055946:intron
TAGGAATGGGAGCAATTCCA+TGG 0.529632 7.4:-15000047 MS.gene055946:CDS
TGGAACAGTACTTTCATGGA+GGG 0.532101 7.4:-15001741 MS.gene055946:CDS
GGACCTATTGCCGATTTCGT+TGG 0.533309 7.4:-15002407 MS.gene055946:CDS
TTCATGAGTAGATTGGAGTA+GGG 0.538540 7.4:-15000931 MS.gene055946:intron
ACCAGCCATCTAGGAGACTC+TGG 0.543206 7.4:+15001536 None:intergenic
CATAGGATTTCCTTCTGCGA+CGG 0.543429 7.4:-15000659 MS.gene055946:intron
CTCCCAATATCCAAAGGCAC+TGG 0.543712 7.4:+15002111 None:intergenic
GATGATGATCTTTGCTTGCA+TGG 0.548086 7.4:+15003013 None:intergenic
TTTAAATTTACCAAAAGTAG+GGG 0.548748 7.4:+15000469 None:intergenic
CCGGCCTGCTCTATCTATGA+GGG 0.555047 7.4:+15000495 None:intergenic
TAGTGAACTGGTTTGGTGCA+TGG 0.558886 7.4:-14999677 MS.gene055946:CDS
ACCTCGGACATCACAACCCA+TGG 0.560460 7.4:+15000030 None:intergenic
GCAAAGATCATCATCATCCA+TGG 0.563043 7.4:-15003005 MS.gene055946:CDS
TACCTGATTTAAGGTAGTCA+GGG 0.563340 7.4:+15001910 None:intergenic
ATTATACTCCCCGTCGCAGA+AGG 0.566503 7.4:+15000649 None:intergenic
GTGGAAGGTGGCAATCAGAA+AGG 0.573070 7.4:-15003078 MS.gene055946:CDS
AGCAGTTGCATTCTATCTCA+AGG 0.573615 7.4:-15000324 MS.gene055946:intron
AGATGCTGATATATCTGAAG+AGG 0.576120 7.4:-15001357 MS.gene055946:CDS
ACCCAGAAGCAACACAGCAG+TGG 0.576369 7.4:+15001571 None:intergenic
CCCAGAAGCAACACAGCAGT+GGG 0.578353 7.4:+15001572 None:intergenic
CCGATTTCGTTGGAAGAAAG+GGG 0.579659 7.4:-15002397 MS.gene055946:CDS
CATCGCACCAAATGTCAAGA+TGG 0.580805 7.4:+15002448 None:intergenic
GCAATTTCTGCTACGAACAC+AGG 0.587269 7.4:+15001953 None:intergenic
TATTTCCAGTCAATATTAAG+GGG 0.587860 7.4:-14999722 MS.gene055946:CDS
GCAGCCCTCATAGATAGAGC+AGG 0.590573 7.4:-15000499 MS.gene055946:CDS
AACTCAAGAAGCTATTAGGA+AGG 0.591182 7.4:-15002763 MS.gene055946:CDS
GTGGTGAAGTAAACCATCCA+TGG 0.596687 7.4:+15002988 None:intergenic
CAGGTTCATGAAGTGGCTGT+GGG 0.601363 7.4:-15000222 MS.gene055946:CDS
AGTGAAGATGGATATCAAAG+AGG 0.602887 7.4:-15003103 None:intergenic
ACTAGCAACAGGATATGGAA+TGG 0.604090 7.4:-15002088 MS.gene055946:CDS
ATGGTTTGCCAGCAATTAGG+GGG 0.608563 7.4:-15000905 MS.gene055946:CDS
AGATCATCATCATCCATGGA+TGG 0.612235 7.4:-15003001 MS.gene055946:CDS
TGCTGATATTAGGTCTACAT+AGG 0.612667 7.4:-15000081 MS.gene055946:intron
ACAGGCAGCCATTAACGCAT+AGG 0.614514 7.4:-14999369 None:intergenic
CGATTTCGTTGGAAGAAAGG+GGG 0.616666 7.4:-15002396 MS.gene055946:intron
TAGCAACAGGATATGGAATG+GGG 0.617086 7.4:-15002086 MS.gene055946:CDS
AATAAGAGAACCATTGATAG+GGG 0.617887 7.4:-15003055 MS.gene055946:CDS
CCCTCATAGATAGAGCAGGC+CGG 0.622479 7.4:-15000495 MS.gene055946:CDS
TAATGAATGCAGGCAAAGCG+AGG 0.623838 7.4:-15001425 MS.gene055946:intron
ATCAAAGAGGATGTGGAAGG+TGG 0.623969 7.4:-15003090 MS.gene055946:CDS
AAGATATTTACGCTCACTCA+CGG 0.630277 7.4:-15001143 MS.gene055946:intron
TGTCAAGATGGAGCCAAACA+AGG 0.632848 7.4:+15002460 None:intergenic
TATGGTTTGCCAGCAATTAG+GGG 0.634878 7.4:-15000906 MS.gene055946:CDS
AGAACAGCTCGCAAAACCGA+AGG 0.635960 7.4:-15001185 MS.gene055946:CDS
CGAGTAACAGGTTCATGAAG+TGG 0.639674 7.4:-15000229 MS.gene055946:intron
GCAGCATTACAAATACTTCG+CGG 0.650248 7.4:-15001383 MS.gene055946:CDS
GCTAGTCTCCCAATATCCAA+AGG 0.651923 7.4:+15002105 None:intergenic
GATATCAAAGAGGATGTGGA+AGG 0.653697 7.4:-15003093 MS.gene055946:CDS
GTAGTAGTCCCAGAAACCAA+AGG 0.657750 7.4:-14999410 MS.gene055946:CDS
TTGGAACAGTACTTTCATGG+AGG 0.660408 7.4:-15001742 MS.gene055946:CDS
TAGGATTTCCTTCTGCGACG+GGG 0.661364 7.4:-15000657 MS.gene055946:CDS
TTAAGGTAGTCAGGGCACCT+CGG 0.669152 7.4:+15001918 None:intergenic
ATGATTGGTGCAATAACAAG+TGG 0.674569 7.4:-15002428 MS.gene055946:CDS
AGGAATGGGAGCAATTCCAT+GGG 0.675398 7.4:-15000046 MS.gene055946:CDS
ACCACAAACTGCAATGAATG+TGG 0.678039 7.4:+15002969 None:intergenic
AGCAACAGGATATGGAATGG+GGG 0.687431 7.4:-15002085 MS.gene055946:CDS
GATTGCAGCGTAAAGAACGA+AGG 0.710685 7.4:+14999460 None:intergenic
TCCATGGGTTGTGATGTCCG+AGG 0.731376 7.4:-15000031 MS.gene055946:intron
ATTGCGCCAAAAGAACTCCG+AGG 0.763517 7.4:-15001935 MS.gene055946:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAGATAATTAACAATT+TGG + chr7.4:15000137-15000156 None:intergenic 10.0%
!!! ATCAATTTTACATAAATATT+AGG + chr7.4:15002208-15002227 None:intergenic 10.0%
!! AAAAAAGTTCAGATATTATT+TGG + chr7.4:15000318-15000337 None:intergenic 15.0%
!! GATTAGATTAATCAAAATAT+AGG - chr7.4:14999796-14999815 MS.gene055946:intron 15.0%
!! GTTAATTATCTTTATTATGT+GGG - chr7.4:15000141-15000160 MS.gene055946:intron 15.0%
!! TGATTATCATATAATAATTC+TGG + chr7.4:15002920-15002939 None:intergenic 15.0%
!! TGTTAATTATCTTTATTATG+TGG - chr7.4:15000140-15000159 MS.gene055946:intron 15.0%
!! TTAAATTAACCAATAATTCT+TGG - chr7.4:15001866-15001885 MS.gene055946:intron 15.0%
!! TTAATTATCTTTATTATGTG+GGG - chr7.4:15000142-15000161 MS.gene055946:intron 15.0%
!!! TACTTTTATTTATGATTTTC+AGG - chr7.4:15002981-15003000 MS.gene055946:CDS 15.0%
!!! TTTATTTTGTTTTGGTTTAT+TGG - chr7.4:15001773-15001792 MS.gene055946:CDS 15.0%
!! AATGTATTAGTATTTACCAT+AGG + chr7.4:15002855-15002874 None:intergenic 20.0%
!! AGAAAAATATACCTGATTTA+AGG + chr7.4:15000568-15000587 None:intergenic 20.0%
!! ATATTTCCAGTCAATATTAA+GGG - chr7.4:15002743-15002762 MS.gene055946:CDS 20.0%
!! ATCTGTGAAAATAAAAATCA+TGG + chr7.4:15001928-15001947 None:intergenic 20.0%
!! ATTTAAAAATAAGAACCTGA+AGG + chr7.4:15001852-15001871 None:intergenic 20.0%
!! CTTTAAATTTACCAAAAGTA+GGG + chr7.4:15002001-15002020 None:intergenic 20.0%
!! TGATATTAAAAACTGAAAGT+GGG + chr7.4:15002478-15002497 None:intergenic 20.0%
!! TTGATATTAAAAACTGAAAG+TGG + chr7.4:15002479-15002498 None:intergenic 20.0%
!! TTTAAATTTACCAAAAGTAG+GGG + chr7.4:15002000-15002019 None:intergenic 20.0%
!! TTTGATGTGTTACATATATA+AGG - chr7.4:15000488-15000507 MS.gene055946:CDS 20.0%
!!! AAAAAAAATCACTTGAGTTT+TGG + chr7.4:15000277-15000296 None:intergenic 20.0%
!!! ATACTCTTATTGTTATTTCT+TGG - chr7.4:15002071-15002090 MS.gene055946:CDS 20.0%
!!! ATTCCAAAACAAACTTTTTA+TGG + chr7.4:15000171-15000190 None:intergenic 20.0%
!!! CTCAGATTTTTATTTTGTTT+TGG - chr7.4:15001765-15001784 MS.gene055946:CDS 20.0%
!!! GAAAATGATGTTAGATATTT+TGG - chr7.4:15000102-15000121 MS.gene055946:intron 20.0%
!!! TATCCATAAAAAGTTTGTTT+TGG - chr7.4:15000165-15000184 MS.gene055946:intron 20.0%
!!! TATTATTTGGAGTATCATTA+TGG + chr7.4:15000305-15000324 None:intergenic 20.0%
!!! TGTTGTTATTTTGTTTTTTC+AGG - chr7.4:14999664-14999683 MS.gene055946:CDS 20.0%
!!! TTTTGATTAATCTAATCCTT+AGG + chr7.4:14999793-14999812 None:intergenic 20.0%
! AATAAAAATCATGGTTGAGT+TGG + chr7.4:15001919-15001938 None:intergenic 25.0%
! ATCTACTCATGAAGAAAAAT+AGG + chr7.4:15001528-15001547 None:intergenic 25.0%
! CAAATATAATGCAATTAAGC+TGG - chr7.4:15001219-15001238 MS.gene055946:intron 25.0%
! CAGCTTAATTGCATTATATT+TGG + chr7.4:15001221-15001240 None:intergenic 25.0%
! GATATTAAAAACTGAAAGTG+GGG + chr7.4:15002477-15002496 None:intergenic 25.0%
! GATATTTCCAGTCAATATTA+AGG - chr7.4:15002742-15002761 MS.gene055946:CDS 25.0%
! TATAGGAAATAGACTGAAAA+TGG - chr7.4:14999813-14999832 MS.gene055946:intron 25.0%
! TATTTCCAGTCAATATTAAG+GGG - chr7.4:15002744-15002763 MS.gene055946:CDS 25.0%
!! AGGAAGATGAAAATTTTGAA+TGG + chr7.4:15001508-15001527 None:intergenic 25.0%
!! ATTGGTTTCTTGAACTAAAT+GGG + chr7.4:15002947-15002966 None:intergenic 25.0%
!! ATTTTTCTTCATGAGTAGAT+TGG - chr7.4:15001528-15001547 MS.gene055946:intron 25.0%
!! GCTTTAAATTTACCAAAAGT+AGG + chr7.4:15002002-15002021 None:intergenic 25.0%
!! TACATAGGATTGTTTTCAAT+AGG - chr7.4:15002400-15002419 MS.gene055946:CDS 25.0%
!! TCAGATTTTCCAAGAATTAT+TGG + chr7.4:15001878-15001897 None:intergenic 25.0%
!!! AAAGTATTGGTTGAATATGA+TGG - chr7.4:15001431-15001450 MS.gene055946:intron 25.0%
!!! ACTTTTTTCTTCCCTTTTAT+AGG - chr7.4:15000330-15000349 MS.gene055946:CDS 25.0%
!!! CTTTTTTCTTCCCTTTTATA+GGG - chr7.4:15000331-15000350 MS.gene055946:CDS 25.0%
!!! TATTGGTGTATTTTTGTCAT+AGG - chr7.4:15001790-15001809 MS.gene055946:intron 25.0%
!!! TATTGGTTTCTTGAACTAAA+TGG + chr7.4:15002948-15002967 None:intergenic 25.0%
!!! TTGTTTTGGAATATATATGC+AGG - chr7.4:15000179-15000198 MS.gene055946:intron 25.0%
AAAAGAAAAACAGTTCCAGT+CGG + chr7.4:15002593-15002612 None:intergenic 30.0%
AAATAAGTGTTTGCAATTGC+AGG - chr7.4:15000864-15000883 MS.gene055946:CDS 30.0%
AAATGAACTGATATTCAGAG+TGG + chr7.4:15001364-15001383 None:intergenic 30.0%
AAGCTGTAAAGTTCTTAGTT+GGG + chr7.4:15002173-15002192 None:intergenic 30.0%
AATAAGAGAACCATTGATAG+GGG - chr7.4:14999411-14999430 MS.gene055946:CDS 30.0%
ACTAGTTATATAATCCTGTG+TGG + chr7.4:15001259-15001278 None:intergenic 30.0%
AGAGGTGGAAAATAAAGTAT+TGG - chr7.4:15001418-15001437 MS.gene055946:intron 30.0%
AGTAAACTTGCATGTTCTAT+TGG + chr7.4:15002965-15002984 None:intergenic 30.0%
ATTTAGATGAAAACATGCAG+TGG - chr7.4:15000978-15000997 MS.gene055946:intron 30.0%
GAATAAGAGAACCATTGATA+GGG - chr7.4:14999410-14999429 MS.gene055946:CDS 30.0%
GATTTAATTGCATGTACCTA+AGG - chr7.4:14999774-14999793 MS.gene055946:intron 30.0%
GCAAGAAATACAATGTTTAG+AGG - chr7.4:14999880-14999899 MS.gene055946:intron 30.0%
GTAATTATACAGTTGAACCT+TGG - chr7.4:14999835-14999854 MS.gene055946:intron 30.0%
GTTTGTGGTTCTTATGAATT+TGG - chr7.4:14999511-14999530 MS.gene055946:intron 30.0%
TAAAAGCCTTGAACAATTAC+AGG - chr7.4:15003079-15003098 MS.gene055946:CDS 30.0%
TAATTGGAACAGTACTTTCA+TGG - chr7.4:15000721-15000740 MS.gene055946:intron 30.0%
TATAATATACGCTATCCTTC+AGG - chr7.4:15001834-15001853 MS.gene055946:intron 30.0%
TCATATGATCTTCTTCTTAG+TGG + chr7.4:15000797-15000816 None:intergenic 30.0%
! AAGTATGATGGTGTTAAACT+TGG + chr7.4:15001665-15001684 None:intergenic 30.0%
! AGGATTGTTTTCAATAGGAA+TGG - chr7.4:15002405-15002424 MS.gene055946:CDS 30.0%
! ATTTTCTTCAAGAATGTGTG+TGG - chr7.4:15001380-15001399 MS.gene055946:CDS 30.0%
! CATGAGAAAGTTGAAAGTAT+AGG + chr7.4:15002822-15002841 None:intergenic 30.0%
! GGATTGTTTTCAATAGGAAT+GGG - chr7.4:15002406-15002425 MS.gene055946:CDS 30.0%
! GTAATTTTCTTTGCCTTTTG+CGG - chr7.4:14999964-14999983 MS.gene055946:intron 30.0%
! GTATCAGTGTCATTCATAAT+TGG - chr7.4:15000705-15000724 MS.gene055946:intron 30.0%
! GTATGTGTTTAATTTCTCTG+TGG - chr7.4:14999638-14999657 MS.gene055946:CDS 30.0%
! GTTTTTCTTTTTCTTTGACC+TGG - chr7.4:15002602-15002621 MS.gene055946:intron 30.0%
! TATTTGGAGTATCATTATGG+CGG + chr7.4:15000302-15000321 None:intergenic 30.0%
! TGATATGCAAGAAAGTATGA+TGG + chr7.4:15001677-15001696 None:intergenic 30.0%
! TTCATTATTTGGTTGGTACT+TGG + chr7.4:15001028-15001047 None:intergenic 30.0%
!! AGTAGTATTTTTGATCTAGC+AGG - chr7.4:15001609-15001628 MS.gene055946:intron 30.0%
!! GTTATTTCTTGGTTTCGATT+AGG - chr7.4:15002082-15002101 MS.gene055946:CDS 30.0%
!! TAAGAGTATCATACATGAAG+TGG + chr7.4:15002060-15002079 None:intergenic 30.0%
!! TCTTAAGTGCAACTTGTTTT+AGG + chr7.4:15002551-15002570 None:intergenic 30.0%
!!! GCTTGTTATTTACTTTTCTG+AGG - chr7.4:15000239-15000258 MS.gene055946:intron 30.0%
!!! GTTATTTTGTTTTTTCAGGC+TGG - chr7.4:14999668-14999687 MS.gene055946:CDS 30.0%
AAAGAAAAACAGTTCCAGTC+GGG + chr7.4:15002592-15002611 None:intergenic 35.0%
AACTCAAGAAGCTATTAGGA+AGG - chr7.4:14999703-14999722 MS.gene055946:CDS 35.0%
AAGATATTTACGCTCACTCA+CGG - chr7.4:15001323-15001342 MS.gene055946:intron 35.0%
ACCAACCAAATAATGAATGC+AGG - chr7.4:15001031-15001050 MS.gene055946:intron 35.0%
AGATGCTGATATATCTGAAG+AGG - chr7.4:15001109-15001128 MS.gene055946:intron 35.0%
ATGATTGGTGCAATAACAAG+TGG - chr7.4:15000038-15000057 MS.gene055946:CDS 35.0%
ATTGATTATACTAGCAGCCA+AGG + chr7.4:14999855-14999874 None:intergenic 35.0%
CTCTTTCTACTGCTGATATT+AGG - chr7.4:15002375-15002394 MS.gene055946:intron 35.0%
CTTTCAACTTTCTCATGAGT+TGG - chr7.4:15002825-15002844 MS.gene055946:intron 35.0%
CTTTGCCTGCATTCATTATT+TGG + chr7.4:15001039-15001058 None:intergenic 35.0%
GAAGCTGTAAAGTTCTTAGT+TGG + chr7.4:15002174-15002193 None:intergenic 35.0%
GGAATAAGAGAACCATTGAT+AGG - chr7.4:14999409-14999428 MS.gene055946:CDS 35.0%
GTCTTTATTATTGTGCCTGA+AGG + chr7.4:15001192-15001211 None:intergenic 35.0%
GTGTCCTCTTAGTAAAAAGA+CGG - chr7.4:15002686-15002705 MS.gene055946:intron 35.0%
TAAAAACTGAAAGTGGGGAA+AGG + chr7.4:15002472-15002491 None:intergenic 35.0%
TAAATCAACTTCGAATTCGC+CGG - chr7.4:15002654-15002673 MS.gene055946:intron 35.0%
TAAATGCAGTACTCCTTGTT+TGG - chr7.4:14999993-15000012 MS.gene055946:intron 35.0%
TGCTGATATTAGGTCTACAT+AGG - chr7.4:15002385-15002404 MS.gene055946:intron 35.0%
TTATTACTTACCAGCCATCT+AGG + chr7.4:15000942-15000961 None:intergenic 35.0%
TTCATGAGTAGATTGGAGTA+GGG - chr7.4:15001535-15001554 MS.gene055946:intron 35.0%
TTCCTAATAGCTTCTTGAGT+TGG + chr7.4:14999704-14999723 None:intergenic 35.0%
! AAGAGGACACATTTTGTAAC+CGG + chr7.4:15002676-15002695 None:intergenic 35.0%
! ATACCTGATTTAAGGTAGTC+AGG + chr7.4:15000560-15000579 None:intergenic 35.0%
! TACCTGATTTAAGGTAGTCA+GGG + chr7.4:15000559-15000578 None:intergenic 35.0%
! TATGCCGTCTTTTTACTAAG+AGG + chr7.4:15002693-15002712 None:intergenic 35.0%
! TTATGGTTTGCCAGCAATTA+GGG - chr7.4:15001559-15001578 MS.gene055946:CDS 35.0%
! TTGTTCAAGGCTTTTACCTT+TGG + chr7.4:15003075-15003094 None:intergenic 35.0%
! TTTTCACAGATTGTGATCAC+AGG - chr7.4:15001937-15001956 MS.gene055946:CDS 35.0%
!! AATCATGGTTGAGTTGGATT+CGG + chr7.4:15001913-15001932 None:intergenic 35.0%
!! CAAGTGCTTTTTGTATTGCA+GGG - chr7.4:15000214-15000233 MS.gene055946:CDS 35.0%
!! TCAAGTGCTTTTTGTATTGC+AGG - chr7.4:15000213-15000232 MS.gene055946:CDS 35.0%
!! TTGTTTTGTTCCCCTATCAA+TGG + chr7.4:14999424-14999443 None:intergenic 35.0%
!!! AATGGGGGTTTTTTCATTTG+TGG - chr7.4:15000396-15000415 MS.gene055946:intron 35.0%
AAGAAAAACAGTTCCAGTCG+GGG + chr7.4:15002591-15002610 None:intergenic 40.0%
ACCACAAACTGCAATGAATG+TGG + chr7.4:14999500-14999519 None:intergenic 40.0%
ACCACATTCATTGCAGTTTG+TGG - chr7.4:14999496-14999515 MS.gene055946:intron 40.0%
ACTAGCAACAGGATATGGAA+TGG - chr7.4:15000378-15000397 MS.gene055946:intron 40.0%
AGATCATCATCATCCATGGA+TGG - chr7.4:14999465-14999484 MS.gene055946:CDS 40.0%
AGCAGTTGCATTCTATCTCA+AGG - chr7.4:15002142-15002161 MS.gene055946:intron 40.0%
AGGTAACTGTGTGTTAGTGT+TGG - chr7.4:15001144-15001163 MS.gene055946:CDS 40.0%
CTAGCAACAGGATATGGAAT+GGG - chr7.4:15000379-15000398 MS.gene055946:intron 40.0%
CTCCAACTCAAGAAGCTATT+AGG - chr7.4:14999699-14999718 MS.gene055946:CDS 40.0%
CTGGAAATATCTGCAGCATA+AGG + chr7.4:15002733-15002752 None:intergenic 40.0%
CTTCATGAGTAGATTGGAGT+AGG - chr7.4:15001534-15001553 MS.gene055946:intron 40.0%
CTTGGTTTCGATTAGGTATC+TGG - chr7.4:15002089-15002108 MS.gene055946:CDS 40.0%
GAAGGATCTTAGTCTGTCTT+TGG - chr7.4:14999721-14999740 MS.gene055946:CDS 40.0%
GATATCAAAGAGGATGTGGA+AGG - chr7.4:14999373-14999392 MS.gene055946:CDS 40.0%
GATGATGATCTTTGCTTGCA+TGG + chr7.4:14999456-14999475 None:intergenic 40.0%
GCAAAGATCATCATCATCCA+TGG - chr7.4:14999461-14999480 MS.gene055946:CDS 40.0%
GCAACATTAGTGAACTGGTT+TGG - chr7.4:15002782-15002801 MS.gene055946:CDS 40.0%
GCAGCATTACAAATACTTCG+CGG - chr7.4:15001083-15001102 MS.gene055946:intron 40.0%
GCATAGCAACATTAGTGAAC+TGG - chr7.4:15002777-15002796 MS.gene055946:CDS 40.0%
GCATTTAGTCAATCCGCAAA+AGG + chr7.4:14999980-14999999 None:intergenic 40.0%
GCCTGCATTCATTATTTGGT+TGG + chr7.4:15001035-15001054 None:intergenic 40.0%
TAGCAACAGGATATGGAATG+GGG - chr7.4:15000380-15000399 MS.gene055946:intron 40.0%
TATTAAGTGACCTTGCCTTC+AGG - chr7.4:15001174-15001193 MS.gene055946:CDS 40.0%
TATTATTGTGCCTGAAGGCA+AGG + chr7.4:15001187-15001206 None:intergenic 40.0%
TGAAACAAATCCAGCACCTT+CGG + chr7.4:15001300-15001319 None:intergenic 40.0%
TGAAGAGGCAGAAGAAATTC+AGG - chr7.4:15001124-15001143 MS.gene055946:intron 40.0%
TGGAACAGTACTTTCATGGA+GGG - chr7.4:15000725-15000744 MS.gene055946:intron 40.0%
TTAGGTATCTGGATCAGGAT+TGG - chr7.4:15002100-15002119 MS.gene055946:CDS 40.0%
TTCGATTAGGTATCTGGATC+AGG - chr7.4:15002095-15002114 MS.gene055946:CDS 40.0%
TTCTTCAAGAATGTGTGTGG+TGG - chr7.4:15001383-15001402 MS.gene055946:CDS 40.0%
TTGGAACAGTACTTTCATGG+AGG - chr7.4:15000724-15000743 MS.gene055946:intron 40.0%
! CCATACCAATATGCCGATTA+CGG + chr7.4:15002287-15002306 None:intergenic 40.0%
! CTTATGGTTTGCCAGCAATT+AGG - chr7.4:15001558-15001577 MS.gene055946:CDS 40.0%
! TATGGTTTGCCAGCAATTAG+GGG - chr7.4:15001560-15001579 MS.gene055946:CDS 40.0%
! TCTTTTTCTTTGACCTGGAG+AGG - chr7.4:15002607-15002626 MS.gene055946:intron 40.0%
! TGGAGGGCTTTAGCTATAAT+CGG - chr7.4:15000741-15000760 MS.gene055946:intron 40.0%
! TTTGGCTCCATCTTGACATT+TGG - chr7.4:15000011-15000030 MS.gene055946:intron 40.0%
!! AGGCTTTTACCTTTGGTTTC+TGG + chr7.4:15003068-15003087 None:intergenic 40.0%
!! ATCATGGTTGAGTTGGATTC+GGG + chr7.4:15001912-15001931 None:intergenic 40.0%
!! GGCTTTTACCTTTGGTTTCT+GGG + chr7.4:15003067-15003086 None:intergenic 40.0%
!! TTGACATTTGGTGCGATGAT+TGG - chr7.4:15000023-15000042 MS.gene055946:intron 40.0%
!!! GGGGTTTTTTCATTTGTGGT+TGG - chr7.4:15000400-15000419 MS.gene055946:intron 40.0%
AACTGAAAGTGGGGAAAGGA+TGG + chr7.4:15002468-15002487 None:intergenic 45.0%
ACTGAAAGTGGGGAAAGGAT+GGG + chr7.4:15002467-15002486 None:intergenic 45.0%
ACTTGCCGTAATCGGCATAT+TGG - chr7.4:15002279-15002298 MS.gene055946:intron 45.0%
AGCAACAGGATATGGAATGG+GGG - chr7.4:15000381-15000400 MS.gene055946:intron 45.0%
AGGAATGGGAGCAATTCCAT+GGG - chr7.4:15002420-15002439 MS.gene055946:CDS 45.0%
ATAGGATTTCCTTCTGCGAC+GGG - chr7.4:15001808-15001827 MS.gene055946:intron 45.0%
ATCAAAGAGGATGTGGAAGG+TGG - chr7.4:14999376-14999395 MS.gene055946:CDS 45.0%
ATGAACCTGTTACTCGCACA+AGG + chr7.4:15002233-15002252 None:intergenic 45.0%
CAGATTGTGATCACAGGTGT+TGG - chr7.4:15001943-15001962 MS.gene055946:CDS 45.0%
CAGCAATTAGGGGGAATCAA+TGG - chr7.4:15001570-15001589 MS.gene055946:CDS 45.0%
CATAGGATTTCCTTCTGCGA+CGG - chr7.4:15001807-15001826 MS.gene055946:intron 45.0%
CATCGCACCAAATGTCAAGA+TGG + chr7.4:15000021-15000040 None:intergenic 45.0%
CCCCTTTCTTCCAACGAAAT+CGG + chr7.4:15000072-15000091 None:intergenic 45.0%
CCGATTTCGTTGGAAGAAAG+GGG - chr7.4:15000069-15000088 MS.gene055946:CDS 45.0%
CCGTAATCGGCATATTGGTA+TGG - chr7.4:15002284-15002303 MS.gene055946:intron 45.0%
CGAGTAACAGGTTCATGAAG+TGG - chr7.4:15002237-15002256 MS.gene055946:CDS 45.0%
CGATTTCGTTGGAAGAAAGG+GGG - chr7.4:15000070-15000089 MS.gene055946:CDS 45.0%
CGCATAAATAGATCCTCTCC+AGG + chr7.4:15002623-15002642 None:intergenic 45.0%
CTTCCAACGAAATCGGCAAT+AGG + chr7.4:15000065-15000084 None:intergenic 45.0%
GATATCCTTGTGCGAGTAAC+AGG - chr7.4:15002225-15002244 MS.gene055946:intron 45.0%
GATATTGGGAGACTAGCAAC+AGG - chr7.4:15000367-15000386 MS.gene055946:intron 45.0%
GATTGCAGCGTAAAGAACGA+AGG + chr7.4:15003009-15003028 None:intergenic 45.0%
GCAATTTCTGCTACGAACAC+AGG + chr7.4:15000516-15000535 None:intergenic 45.0%
GGAAGAAAGGGGGTAATTTC+AGG - chr7.4:15000080-15000099 MS.gene055946:intron 45.0%
GTAGATTGGAGTAGGGCTTA+TGG - chr7.4:15001542-15001561 MS.gene055946:CDS 45.0%
GTAGTAGTCCCAGAAACCAA+AGG - chr7.4:15003056-15003075 MS.gene055946:CDS 45.0%
GTCCAGTGCCTTTGGATATT+GGG - chr7.4:15000353-15000372 MS.gene055946:CDS 45.0%
GTGGTGAAGTAAACCATCCA+TGG + chr7.4:14999481-14999500 None:intergenic 45.0%
TAATGAATGCAGGCAAAGCG+AGG - chr7.4:15001041-15001060 MS.gene055946:intron 45.0%
TAGGAATGGGAGCAATTCCA+TGG - chr7.4:15002419-15002438 MS.gene055946:CDS 45.0%
TCATTCCAGAGTCTCCTAGA+TGG - chr7.4:15000925-15000944 MS.gene055946:intron 45.0%
TCCAGTCAATATTAAGGGGC+AGG - chr7.4:15002748-15002767 MS.gene055946:CDS 45.0%
TCTTAGTCTGTCTTTGGCAG+AGG - chr7.4:14999727-14999746 MS.gene055946:intron 45.0%
TGCCCTGACTACCTTAAATC+AGG - chr7.4:15000554-15000573 MS.gene055946:intron 45.0%
TGGCTGCCTGTAATTGTTCA+AGG + chr7.4:15003088-15003107 None:intergenic 45.0%
TGTCAAGATGGAGCCAAACA+AGG + chr7.4:15000009-15000028 None:intergenic 45.0%
TTACCAAAAGTAGGGGCTTC+CGG + chr7.4:15001993-15002012 None:intergenic 45.0%
TTTATAGGGTCCAGTGCCTT+TGG - chr7.4:15000345-15000364 MS.gene055946:CDS 45.0%
! AGGACGCGCAAAAGATTTTG+TGG - chr7.4:15001061-15001080 MS.gene055946:intron 45.0%
! ATGGTTTGCCAGCAATTAGG+GGG - chr7.4:15001561-15001580 MS.gene055946:CDS 45.0%
! GCCGATTTCGTTGGAAGAAA+GGG - chr7.4:15000068-15000087 MS.gene055946:CDS 45.0%
! GCTAGTCTCCCAATATCCAA+AGG + chr7.4:15000364-15000383 None:intergenic 45.0%
!! AAGGCACTGGACCCTATAAA+AGG + chr7.4:15000345-15000364 None:intergenic 45.0%
!! AATGTGTGTGGTGGACTACT+AGG - chr7.4:15001392-15001411 MS.gene055946:CDS 45.0%
!! AGGCACTGGACCCTATAAAA+GGG + chr7.4:15000344-15000363 None:intergenic 45.0%
!! CATTGATTCCCCCTAATTGC+TGG + chr7.4:15001572-15001591 None:intergenic 45.0%
!! GTGCTTTTTGTATTGCAGGG+TGG - chr7.4:15000217-15000236 MS.gene055946:CDS 45.0%
!! TAGTGAACTGGTTTGGTGCA+TGG - chr7.4:15002789-15002808 MS.gene055946:intron 45.0%
!! TCATGGTTGAGTTGGATTCG+GGG + chr7.4:15001911-15001930 None:intergenic 45.0%
!! TGCCGATTTCGTTGGAAGAA+AGG - chr7.4:15000067-15000086 MS.gene055946:CDS 45.0%
ACAGGTTCATGAAGTGGCTG+TGG - chr7.4:15002243-15002262 MS.gene055946:CDS 50.0%
AGAACAGCTCGCAAAACCGA+AGG - chr7.4:15001281-15001300 MS.gene055946:intron 50.0%
ATTATACTCCCCGTCGCAGA+AGG + chr7.4:15001820-15001839 None:intergenic 50.0%
ATTGCGCCAAAAGAACTCCG+AGG - chr7.4:15000531-15000550 MS.gene055946:intron 50.0%
CAGGTTCATGAAGTGGCTGT+GGG - chr7.4:15002244-15002263 MS.gene055946:CDS 50.0%
CTGAAAGTGGGGAAAGGATG+GGG + chr7.4:15002466-15002485 None:intergenic 50.0%
GCAAAATGTTGATCCCCGAC+TGG - chr7.4:15002575-15002594 MS.gene055946:intron 50.0%
GCAACACAGCAGTGGGAATA+AGG + chr7.4:15000890-15000909 None:intergenic 50.0%
GCCTGCCCCTTAATATTGAC+TGG + chr7.4:15002752-15002771 None:intergenic 50.0%
GGGAGACTAGCAACAGGATA+TGG - chr7.4:15000373-15000392 MS.gene055946:intron 50.0%
GGTCCAGTGCCTTTGGATAT+TGG - chr7.4:15000352-15000371 MS.gene055946:CDS 50.0%
GTCAATATTAAGGGGCAGGC+AGG - chr7.4:15002752-15002771 MS.gene055946:CDS 50.0%
GTGGAAGGTGGCAATCAGAA+AGG - chr7.4:14999388-14999407 MS.gene055946:CDS 50.0%
TAGGATTTCCTTCTGCGACG+GGG - chr7.4:15001809-15001828 MS.gene055946:intron 50.0%
TGAAAGTGGGGAAAGGATGG+GGG + chr7.4:15002465-15002484 None:intergenic 50.0%
! CTCATGAGTTGGAGCTCCTA+TGG - chr7.4:15002836-15002855 MS.gene055946:intron 50.0%
! CTCCCAATATCCAAAGGCAC+TGG + chr7.4:15000358-15000377 None:intergenic 50.0%
! TGGACTACTAGGTTGAGAGG+TGG - chr7.4:15001403-15001422 MS.gene055946:CDS 50.0%
! TTAAGGTAGTCAGGGCACCT+CGG + chr7.4:15000551-15000570 None:intergenic 50.0%
!! CATGGTTGAGTTGGATTCGG+GGG + chr7.4:15001910-15001929 None:intergenic 50.0%
!! GGACCTATTGCCGATTTCGT+TGG - chr7.4:15000059-15000078 MS.gene055946:CDS 50.0%
!! TCTGGATCAGGATTGGTTGC+AGG - chr7.4:15002107-15002126 MS.gene055946:CDS 50.0%
!! TGGTGGACTACTAGGTTGAG+AGG - chr7.4:15001400-15001419 MS.gene055946:CDS 50.0%
ACCAGCCATCTAGGAGACTC+TGG + chr7.4:15000933-15000952 None:intergenic 55.0%
ACCCAGAAGCAACACAGCAG+TGG + chr7.4:15000898-15000917 None:intergenic 55.0%
ACCTCGGACATCACAACCCA+TGG + chr7.4:15002439-15002458 None:intergenic 55.0%
CCCAGAAGCAACACAGCAGT+GGG + chr7.4:15000897-15000916 None:intergenic 55.0%
CCCTCATAGATAGAGCAGGC+CGG - chr7.4:15001971-15001990 MS.gene055946:intron 55.0%
CCGGCCTGCTCTATCTATGA+GGG + chr7.4:15001974-15001993 None:intergenic 55.0%
CGTATCTGTCACTGCCACAC+AGG - chr7.4:15001242-15001261 MS.gene055946:intron 55.0%
GCAGCCCTCATAGATAGAGC+AGG - chr7.4:15001967-15001986 MS.gene055946:intron 55.0%
GTCCCAGCACTTGCCGTAAT+CGG - chr7.4:15002271-15002290 MS.gene055946:intron 55.0%
TCCAGAGTCTCCTAGATGGC+TGG - chr7.4:15000929-15000948 MS.gene055946:intron 55.0%
TCCGGCCTGCTCTATCTATG+AGG + chr7.4:15001975-15001994 None:intergenic 55.0%
! ATGCCGATTACGGCAAGTGC+TGG + chr7.4:15002277-15002296 None:intergenic 55.0%
! TCCATGGGTTGTGATGTCCG+AGG - chr7.4:15002435-15002454 MS.gene055946:CDS 55.0%
! TGCCGATTACGGCAAGTGCT+GGG + chr7.4:15002276-15002295 None:intergenic 55.0%
!! AGGGCACCTCGGAGTTCTTT+TGG + chr7.4:15000540-15000559 None:intergenic 55.0%
!! CCCACTGCTGTGTTGCTTCT+GGG - chr7.4:15000894-15000913 MS.gene055946:CDS 55.0%
!! GAAAGGATGGGGGAGTACCT+CGG + chr7.4:15002455-15002474 None:intergenic 55.0%
!! TCCCACTGCTGTGTTGCTTC+TGG - chr7.4:15000893-15000912 MS.gene055946:CDS 55.0%
! AGGCCGGAAGCCCCTACTTT+TGG - chr7.4:15001987-15002006 MS.gene055946:intron 60.0%
! GCTCGCAAAACCGAAGGTGC+TGG - chr7.4:15001287-15001306 MS.gene055946:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 14999370 15003118 14999370 ID=MS.gene055946
chr7.4 mRNA 14999370 15003118 14999370 ID=MS.gene055946.t1;Parent=MS.gene055946
chr7.4 exon 15002948 15003118 15002948 ID=MS.gene055946.t1.exon1;Parent=MS.gene055946.t1
chr7.4 CDS 15002948 15003118 15002948 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15002740 15002802 15002740 ID=MS.gene055946.t1.exon2;Parent=MS.gene055946.t1
chr7.4 CDS 15002740 15002802 15002740 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15002397 15002486 15002397 ID=MS.gene055946.t1.exon3;Parent=MS.gene055946.t1
chr7.4 CDS 15002397 15002486 15002397 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15002228 15002287 15002228 ID=MS.gene055946.t1.exon4;Parent=MS.gene055946.t1
chr7.4 CDS 15002228 15002287 15002228 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15002071 15002136 15002071 ID=MS.gene055946.t1.exon5;Parent=MS.gene055946.t1
chr7.4 CDS 15002071 15002136 15002071 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15001913 15001978 15001913 ID=MS.gene055946.t1.exon6;Parent=MS.gene055946.t1
chr7.4 CDS 15001913 15001978 15001913 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15001726 15001801 15001726 ID=MS.gene055946.t1.exon7;Parent=MS.gene055946.t1
chr7.4 CDS 15001726 15001801 15001726 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15001538 15001602 15001538 ID=MS.gene055946.t1.exon8;Parent=MS.gene055946.t1
chr7.4 CDS 15001538 15001602 15001538 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15001343 15001435 15001343 ID=MS.gene055946.t1.exon9;Parent=MS.gene055946.t1
chr7.4 CDS 15001343 15001435 15001343 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15001144 15001224 15001144 ID=MS.gene055946.t1.exon10;Parent=MS.gene055946.t1
chr7.4 CDS 15001144 15001224 15001144 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15000858 15000942 15000858 ID=MS.gene055946.t1.exon11;Parent=MS.gene055946.t1
chr7.4 CDS 15000858 15000942 15000858 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15000633 15000676 15000633 ID=MS.gene055946.t1.exon12;Parent=MS.gene055946.t1
chr7.4 CDS 15000633 15000676 15000633 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15000480 15000542 15000480 ID=MS.gene055946.t1.exon13;Parent=MS.gene055946.t1
chr7.4 CDS 15000480 15000542 15000480 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15000325 15000384 15000325 ID=MS.gene055946.t1.exon14;Parent=MS.gene055946.t1
chr7.4 CDS 15000325 15000384 15000325 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15000188 15000241 15000188 ID=MS.gene055946.t1.exon15;Parent=MS.gene055946.t1
chr7.4 CDS 15000188 15000241 15000188 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 15000032 15000091 15000032 ID=MS.gene055946.t1.exon16;Parent=MS.gene055946.t1
chr7.4 CDS 15000032 15000091 15000032 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 14999631 14999745 14999631 ID=MS.gene055946.t1.exon17;Parent=MS.gene055946.t1
chr7.4 CDS 14999631 14999745 14999631 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
chr7.4 exon 14999370 14999485 14999370 ID=MS.gene055946.t1.exon18;Parent=MS.gene055946.t1
chr7.4 CDS 14999370 14999485 14999370 ID=cds.MS.gene055946.t1;Parent=MS.gene055946.t1
Gene Sequence

>MS.gene055946

ATGGATATCAAAGAGGATGTGGAAGGTGGCAATCAGAAAGGAATAAGAGAACCATTGATAGGGGAACAAAACAATCAACTTGTCCATGCAAGCAAAGATCATCATCATCCATGGATGGTTTACTTCACCACATTCATTGCAGTTTGTGGTTCTTATGAATTTGGTGCTTGTGTAAGTCTTTACTTCTCTGTAAATCAGCAATAAGAAGCACTGTTTTAGATGAAAATCAGTTAGAAGAAGTACTAAATTGACTAAAGAGTTTTATAGAGTATGTGTTTAATTTCTCTGTGGAATTGTTGTTATTTTGTTTTTTCAGGCTGGATATTCATCTCCAACTCAAGAAGCTATTAGGAAGGATCTTAGTCTGTCTTTGGCAGAGGTAAGACAGTAATGATTGAAAAATTGATTTAATTGCATGTACCTAAGGATTAGATTAATCAAAATATAGGAAATAGACTGAAAATGGTAATTATACAGTTGAACCTTGGCTGCTAGTATAATCAATTTGCAGCAAGAAATACAATGTTTAGAGGCAAAAAACTCATGATTATCATGTACTCAAAGTTTGTATAACTTTTACTTAACAGATTTGATGTAATTTTCTTTGCCTTTTGCGGATTGACTAAATGCAGTACTCCTTGTTTGGCTCCATCTTGACATTTGGTGCGATGATTGGTGCAATAACAAGTGGACCTATTGCCGATTTCGTTGGAAGAAAGGGGGTAATTTCAGGAAAATGATGTTAGATATTTTGGAATTAACTTCCAAATTGTTAATTATCTTTATTATGTGGGGTATCCATAAAAAGTTTGTTTTGGAATATATATGCAGGCAATGAGAGTGTCAAGTGCTTTTTGTATTGCAGGGTGGCTTGTTATTTACTTTTCTGAGGTACTTTCATACTCCAAAACTCAAGTGATTTTTTTTTTCCGCCATAATGATACTCCAAATAATATCTGAACTTTTTTCTTCCCTTTTATAGGGTCCAGTGCCTTTGGATATTGGGAGACTAGCAACAGGATATGGAATGGGGGTTTTTTCATTTGTGGTTGGTTTTTAGTTCTATTTGTTCAATGAAATGATTCTCAAAATTTTATTTTTAAACTGTTGACTTTTAATTTGATGTGTTACATATATAAGGTTCCTGTGTTCGTAGCAGAAATTGCGCCAAAAGAACTCCGAGGTGCCCTGACTACCTTAAATCAGGTATATTTTTCTTACACATTGTAACTTCATGATCACAATAATAACTAATATATAAGTATTTGCATTGAACTTAGCAATGACATATAAGTTTGTTTTCTTCTTCTTTTGTAGTTCATGATTGTTACTGCTGTATCAGTGTCATTCATAATTGGAACAGTACTTTCATGGAGGGCTTTAGCTATAATCGGTCAGTTTTCTTTGCAATTTAAAATATAATTCCACTAAGAAGAAGATCATATGAAGTAAAAAACTTAGAACATTATAAATTAATTGAAACTTTTCAGTACTAAATAAGTGTTTGCAATTGCAGGCCTTATTCCCACTGCTGTGTTGCTTCTGGGTCTGTTTTTCATTCCAGAGTCTCCTAGATGGCTGGTAAGTAATAAATTTTCATATAAATGTATTTAGATGAAAACATGCAGTGGTTATTTAGCATAACATCAAGATTACCAAGTACCAACCAAATAATGAATGCAGGCAAAGCGAGGACGCGCAAAAGATTTTGTGGCAGCATTACAAATACTTCGCGGTAAAGATGCTGATATATCTGAAGAGGCAGAAGAAATTCAGGTAACTGTGTGTTAGTGTTGGATATTATTATTAAGTGACCTTGCCTTCAGGCACAATAATAAAGACAGAATTCCAAATATAATGCAATTAAGCTGGCGTATCTGTCACTGCCACACAGGATTATATAACTAGTTTAGAACAGCTCGCAAAACCGAAGGTGCTGGATTTGTTTCAAAGAAGATATTTACGCTCACTCACGGTATGTAGCTATAATTCCACTCTGAATATCAGTTCATTTTCTTCAAGAATGTGTGTGGTGGACTACTAGGTTGAGAGGTGGAAAATAAAGTATTGGTTGAATATGATGGTTTATTTTTCACTTCTCATATTTGTTCTATTAAGCAAATCTGAAGTGATTTCCATTCAAAATTTTCATCTTCCTATTTTTCTTCATGAGTAGATTGGAGTAGGGCTTATGGTTTGCCAGCAATTAGGGGGAATCAATGGTGTTTGCTTTTATACTAGTAGTATTTTTGATCTAGCAGGTACTTAATTCTGTAATTGTAACTCTTCATTCCAAGTTTAACACCATCATACTTTCTTGCATATCACGTTTTGCATGTAAACTATAGCTCAAAATTAAAGCATGTTTTAAAACTTGAATAACTTTCATGAGACACTCAGATTTTTATTTTGTTTTGGTTTATTGGTGTATTTTTGTCATAGGATTTCCTTCTGCGACGGGGAGTATAATATACGCTATCCTTCAGGTTCTTATTTTTAAATTAACCAATAATTCTTGGAAAATCTGATTTGTGTTTCCCCCGAATCCAACTCAACCATGATTTTTATTTTCACAGATTGTGATCACAGGTGTTGGAGCAGCCCTCATAGATAGAGCAGGCCGGAAGCCCCTACTTTTGGTAAATTTAAAGCTCAAACAGCTTATTTTTATTTTCATTTGCTTATCTCCACTTCATGTATGATACTCTTATTGTTATTTCTTGGTTTCGATTAGGTATCTGGATCAGGATTGGTTGCAGGATGTATATTTACAGCAGTTGCATTCTATCTCAAGGTACATCCCAACTAAGAACTTTACAGCTTCAAGTTTTTAATCCTAATATTTATGTAAAATTGATATCCTTGTGCGAGTAACAGGTTCATGAAGTGGCTGTGGGAGCAGTCCCAGCACTTGCCGTAATCGGCATATTGGTATGGCTACATCATCTTTCTCTGCTGATGCATTTTTTATATGTATCTCATAAATATGAATTCATGTAACATTGCTCTTTCTACTGCTGATATTAGGTCTACATAGGATTGTTTTCAATAGGAATGGGAGCAATTCCATGGGTTGTGATGTCCGAGGTACTCCCCCATCCTTTCCCCACTTTCAGTTTTTAATATCAATAAGATGAGAACAAGAGAAGAGATGCAAATTAGTTAAATAGTTACTTTTCCTAAAACAAGTTGCACTTAAGAAGTAGCAAAATGTTGATCCCCGACTGGAACTGTTTTTCTTTTTCTTTGACCTGGAGAGGATCTATTTATGCGTGTTACTTTGCTAAATCAACTTCGAATTCGCCGGTTACAAAATGTGTCCTCTTAGTAAAAAGACGGCATAAAGTTTGCTAAAAATTACCTTATGCTGCAGATATTTCCAGTCAATATTAAGGGGCAGGCAGGAAGCATAGCAACATTAGTGAACTGGTTTGGTGCATGGTTATGCTCCTATACTTTCAACTTTCTCATGAGTTGGAGCTCCTATGGTAAATACTAATACATTATTTTTCAGCTTTATTTCATTTAAAAGACTAATGATCACTGACCAGAATTATTATATGATAATCATTTTCCCATTTAGTTCAAGAAACCAATAGAACATGCAAGTTTACTTTTATTTATGATTTTCAGGTACCTTCGTTCTTTACGCTGCAATCAATGCACTGTCTATATTATTTATAGTTGTAGTAGTCCCAGAAACCAAAGGTAAAAGCCTTGAACAATTACAGGCAGCCATTAACGCATAG

Protein sequence

>MS.gene055946.t1

MDIKEDVEGGNQKGIREPLIGEQNNQLVHASKDHHHPWMVYFTTFIAVCGSYEFGACAGYSSPTQEAIRKDLSLSLAEYSLFGSILTFGAMIGAITSGPIADFVGRKGAMRVSSAFCIAGWLVIYFSEGPVPLDIGRLATGYGMGVFSFVVPVFVAEIAPKELRGALTTLNQFMIVTAVSVSFIIGTVLSWRALAIIGLIPTAVLLLGLFFIPESPRWLAKRGRAKDFVAALQILRGKDADISEEAEEIQDYITSLEQLAKPKVLDLFQRRYLRSLTIGVGLMVCQQLGGINGVCFYTSSIFDLAGFPSATGSIIYAILQIVITGVGAALIDRAGRKPLLLVSGSGLVAGCIFTAVAFYLKVHEVAVGAVPALAVIGILVYIGLFSIGMGAIPWVVMSEIFPVNIKGQAGSIATLVNWFGAWLCSYTFNFLMSWSSYGTFVLYAAINALSILFIVVVVPETKGKSLEQLQAAINA