Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80868.t1 | RHN73972.1 | 88 | 848 | 102 | 0 | 1 | 848 | 27 | 874 | 1.30E-140 | 510.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80868.t1 | Q6JN47 | 32.3 | 235 | 138 | 5 | 6 | 232 | 34 | 255 | 1.8e-21 | 106.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80868.t1 | A0A396J9G7 | 88.0 | 848 | 102 | 0 | 1 | 848 | 27 | 874 | 9.5e-141 | 510.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054892 | MS.gene80868 | 0.814752 | 1.31E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene80868 | 0.815336 | 9.74E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 185 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATCTATGAGCAATATTT+TGG | 0.125762 | 2.4:+40644901 | None:intergenic |
| CTCTCTCAGGGTCAACTTTC+AGG | 0.141808 | 2.4:-40644078 | MS.gene80868:CDS |
| GAAAGAGAAGGATGGATTTC+TGG | 0.168033 | 2.4:+40646466 | None:intergenic |
| CTTTCAGTGAACAAATTAAT+TGG | 0.213420 | 2.4:-40644786 | MS.gene80868:CDS |
| ATTCTAACTGATTCATAAAA+TGG | 0.220358 | 2.4:+40646371 | None:intergenic |
| GCACAATTACTCAACCAAAT+TGG | 0.226950 | 2.4:+40645929 | None:intergenic |
| AATCTTACTCACTTGCTTCT+TGG | 0.228167 | 2.4:-40644876 | MS.gene80868:CDS |
| AATGATTGCGTGACAGATTT+AGG | 0.240347 | 2.4:+40644157 | None:intergenic |
| TCCAAACTCCGTAGGAAAAC+TGG | 0.255009 | 2.4:-40645405 | MS.gene80868:CDS |
| GTGAGGTTTCCAAGGTTATT+TGG | 0.257324 | 2.4:+40646310 | None:intergenic |
| CATCACTCAGGTAAAGGTTT+TGG | 0.267846 | 2.4:+40646206 | None:intergenic |
| TTAACCTTAGAATCTGCATT+AGG | 0.277550 | 2.4:+40644514 | None:intergenic |
| ACTTTCTGCTTTGCAAATCT+TGG | 0.277888 | 2.4:-40644448 | MS.gene80868:CDS |
| AAATTGAATCAGTTCCATTA+TGG | 0.280695 | 2.4:-40645802 | MS.gene80868:CDS |
| TCTCCCTAATGCAGATTCTA+AGG | 0.282834 | 2.4:-40644518 | MS.gene80868:CDS |
| TATCTAATAACCACTTGTTT+GGG | 0.289694 | 2.4:-40645361 | MS.gene80868:CDS |
| CTGAACAATAATAATTTAAC+TGG | 0.292133 | 2.4:-40645290 | MS.gene80868:CDS |
| GTCTTAGTACAGTTCCAATT+TGG | 0.304500 | 2.4:-40645943 | MS.gene80868:CDS |
| CTATCTAATAACCACTTGTT+TGG | 0.304987 | 2.4:-40645362 | MS.gene80868:CDS |
| TGAGGTTTCCAAGGTTATTT+GGG | 0.305708 | 2.4:+40646311 | None:intergenic |
| GTTGGGGCAACTTGAAAATA+TGG | 0.308538 | 2.4:-40645540 | MS.gene80868:CDS |
| CTTAGTTATTTAGACCTTAG+TGG | 0.317297 | 2.4:-40646430 | MS.gene80868:CDS |
| CTTTCATCGAACAAATTATC+AGG | 0.319201 | 2.4:-40644714 | MS.gene80868:CDS |
| CAACTGTTAATCTTAGATAT+TGG | 0.321251 | 2.4:-40644588 | MS.gene80868:CDS |
| CACATATTTCCTAGCATTGT+TGG | 0.332714 | 2.4:+40645707 | None:intergenic |
| TACAAGAAATTTGAAATTTG+TGG | 0.334254 | 2.4:-40644256 | MS.gene80868:CDS |
| GGGGAATTTCCTGATAGTTT+TGG | 0.339214 | 2.4:-40645053 | MS.gene80868:CDS |
| TGATAATCTTCTCTTCTTTG+TGG | 0.342978 | 2.4:+40646526 | None:intergenic |
| TTGAATAATAACAATCTTCA+TGG | 0.346707 | 2.4:-40644642 | MS.gene80868:CDS |
| ATGCAACGGATCTGGTTTAA+AGG | 0.347325 | 2.4:-40645609 | MS.gene80868:CDS |
| ATGAATTGTCCAATACAATT+AGG | 0.350058 | 2.4:+40645260 | None:intergenic |
| GGTACAATCCCACAAAATAT+TGG | 0.353537 | 2.4:-40645125 | MS.gene80868:CDS |
| AGAGTTATTTCTCTAGGAAT+AGG | 0.355312 | 2.4:+40644198 | None:intergenic |
| AAACTTGACTCTCTTTATCT+TGG | 0.357405 | 2.4:-40645905 | MS.gene80868:CDS |
| GGGGAAGTGACCCAGTGATA+TGG | 0.358288 | 2.4:+40644922 | None:intergenic |
| GATCAGCTGCCGACATGGTT+GGG | 0.358545 | 2.4:-40645557 | MS.gene80868:CDS |
| CTTCTCTTCCTTTAATGACC+TGG | 0.362271 | 2.4:+40644286 | None:intergenic |
| TGAGTTGAATTCCAACAATC+AGG | 0.365465 | 2.4:+40644756 | None:intergenic |
| CTTGGAAGCAATGCTCTTAA+CGG | 0.366161 | 2.4:-40645887 | MS.gene80868:CDS |
| TACACTCTGATGATGTCAAT+TGG | 0.369512 | 2.4:-40646249 | MS.gene80868:CDS |
| CTTGGTAACAATTACTTGAA+TGG | 0.370559 | 2.4:-40645434 | MS.gene80868:CDS |
| GGATATCTTCCTAATTGTAT+TGG | 0.372631 | 2.4:-40645269 | MS.gene80868:CDS |
| GATAATCTTCTCTTCTTTGT+GGG | 0.376287 | 2.4:+40646527 | None:intergenic |
| AGACATGTCTCTAAACAATA+TGG | 0.381338 | 2.4:-40645006 | MS.gene80868:CDS |
| TCTAGTAGCCATTCATCATT+TGG | 0.381346 | 2.4:-40646718 | None:intergenic |
| TTTAAATTTCTCAAGAATGA+TGG | 0.385717 | 2.4:+40644612 | None:intergenic |
| TGAATCGTTGGACCTCTCTC+AGG | 0.387734 | 2.4:-40644091 | MS.gene80868:CDS |
| TAACCTTAGAATCTGCATTA+GGG | 0.390136 | 2.4:+40644515 | None:intergenic |
| TTGGGATGATACCACTCAAA+TGG | 0.391415 | 2.4:+40646329 | None:intergenic |
| CTGATCATTGAAATTGTTGT+TGG | 0.392123 | 2.4:+40645574 | None:intergenic |
| GACATCATCAGAGTGTAAAT+AGG | 0.393244 | 2.4:+40646255 | None:intergenic |
| CTTGCAGATAATGAACTTGA+TGG | 0.393673 | 2.4:-40646028 | MS.gene80868:CDS |
| CATCATTAAGACTTTCCTCT+TGG | 0.396892 | 2.4:-40646639 | MS.gene80868:CDS |
| AAGAAGCAAGTGAGTAAGAT+TGG | 0.405021 | 2.4:+40644878 | None:intergenic |
| TTGGCAACATTCCTGATTGT+TGG | 0.410936 | 2.4:-40644767 | MS.gene80868:CDS |
| ATAAGTTGCAGCAACATTAC+AGG | 0.411979 | 2.4:-40646586 | MS.gene80868:CDS |
| TCTAACCCACCTAACCATAA+TGG | 0.415361 | 2.4:+40645788 | None:intergenic |
| AAGATAAAGAGAGTCAAGTT+TGG | 0.419419 | 2.4:+40645907 | None:intergenic |
| TTCAATATATGTCGACCCAC+TGG | 0.420618 | 2.4:+40644329 | None:intergenic |
| AAAAGTTGACCAAAACTATC+AGG | 0.421856 | 2.4:+40645044 | None:intergenic |
| CAAACAAGTGGTTATTAGAT+AGG | 0.429919 | 2.4:+40645363 | None:intergenic |
| GATGTCAGCCAGGTCATTAA+AGG | 0.429958 | 2.4:-40644294 | MS.gene80868:CDS |
| TTGGTATAGAACCCTCAATA+TGG | 0.430432 | 2.4:+40645726 | None:intergenic |
| AAATGGATAAAAGTTGGTAT+TGG | 0.430643 | 2.4:+40646388 | None:intergenic |
| AACTGAAATTGTTTCCACTA+AGG | 0.432355 | 2.4:+40646416 | None:intergenic |
| GAATCAGTTCCATTATGGTT+AGG | 0.433113 | 2.4:-40645797 | MS.gene80868:CDS |
| GTCAGCTTTCAACTTTGCTA+TGG | 0.444575 | 2.4:-40644671 | MS.gene80868:CDS |
| AACCTTGATTTGTCAGAAAA+CGG | 0.444589 | 2.4:-40645155 | MS.gene80868:CDS |
| TTTCTAAAAGCATTCAGATC+TGG | 0.445069 | 2.4:+40646004 | None:intergenic |
| TGTCAGGAACTATACCTTCA+TGG | 0.445625 | 2.4:-40644554 | MS.gene80868:CDS |
| TTGTCTGGAAACAGACTTCA+AGG | 0.448539 | 2.4:-40645665 | MS.gene80868:CDS |
| TTCATAAAATGGATAAAAGT+TGG | 0.449029 | 2.4:+40646382 | None:intergenic |
| TCTCTTCTTTGTGGGTAGCA+TGG | 0.451283 | 2.4:+40646535 | None:intergenic |
| ACACTCTGATGATGTCAATT+GGG | 0.452421 | 2.4:-40646248 | MS.gene80868:CDS |
| GAGGGCACAAAATTTATTCA+AGG | 0.454397 | 2.4:-40646173 | MS.gene80868:CDS |
| TGACCCAGTGATATGGTTCT+TGG | 0.457202 | 2.4:+40644929 | None:intergenic |
| AATTTGAAATATTTAACCCT+TGG | 0.464392 | 2.4:-40645452 | MS.gene80868:CDS |
| CTGTCACGCAATCATTTGTC+AGG | 0.471087 | 2.4:-40644150 | MS.gene80868:CDS |
| ATGTTGTCAAAATTGACCTT+AGG | 0.473330 | 2.4:-40646561 | MS.gene80868:CDS |
| TGAATAATAACAATCTTCAT+GGG | 0.473849 | 2.4:-40644641 | MS.gene80868:CDS |
| GTGAGAAGAGTTATTTCTCT+AGG | 0.474162 | 2.4:+40644192 | None:intergenic |
| TCTGCAGGATGCAACGGATC+TGG | 0.474441 | 2.4:-40645617 | MS.gene80868:CDS |
| TGACCCCATCAACATGTTGT+TGG | 0.475315 | 2.4:+40644419 | None:intergenic |
| ATCATTAAGACTTTCCTCTT+GGG | 0.475524 | 2.4:-40646638 | MS.gene80868:CDS |
| TCTATCCAACAACATGTTGA+TGG | 0.476950 | 2.4:-40644424 | MS.gene80868:CDS |
| TGATCAGCTGCCGACATGGT+TGG | 0.477728 | 2.4:-40645558 | MS.gene80868:CDS |
| GGTTATTAGATAGGTCCAAC+TGG | 0.478021 | 2.4:+40645372 | None:intergenic |
| TTGGAATGGAGTCATTTATG+AGG | 0.478677 | 2.4:+40644847 | None:intergenic |
| AATTCTAATTCTAGCAAAGA+AGG | 0.480897 | 2.4:+40646136 | None:intergenic |
| GGTGTTATTCCAAGCTCGTT+TGG | 0.481973 | 2.4:-40644693 | MS.gene80868:CDS |
| CTTCTGTCACTAGATTTGTC+TGG | 0.485423 | 2.4:-40645680 | MS.gene80868:CDS |
| GGTCAATCCCACAATGCGTT+GGG | 0.485519 | 2.4:-40644401 | MS.gene80868:CDS |
| CATGATTCCATGAAATATTG+AGG | 0.490584 | 2.4:+40645753 | None:intergenic |
| TAAAATTCCCAACGCATTGT+GGG | 0.492128 | 2.4:+40644394 | None:intergenic |
| ACTAATTGCTCAAGACTCCT+AGG | 0.495059 | 2.4:+40645188 | None:intergenic |
| AAGGAAATGACTGTTGCAAA+TGG | 0.496037 | 2.4:-40646615 | MS.gene80868:CDS |
| TGGGATGATACCACTCAAAT+GGG | 0.496059 | 2.4:+40646330 | None:intergenic |
| GTCAAATTTCGAAGAGCTGA+TGG | 0.496910 | 2.4:+40645857 | None:intergenic |
| TACTAAGACTATTGTTAGAA+AGG | 0.497094 | 2.4:+40645957 | None:intergenic |
| TTGTCAGAAAACGGTCTGAA+TGG | 0.497568 | 2.4:-40645146 | MS.gene80868:CDS |
| GTGAAATTCCTACAGCCATA+GGG | 0.498025 | 2.4:-40644128 | MS.gene80868:CDS |
| CAATTAATTTGTTCACTGAA+AGG | 0.503091 | 2.4:+40644787 | None:intergenic |
| AATGGGAATCAGAGATAGAA+AGG | 0.505145 | 2.4:+40646347 | None:intergenic |
| ATCTCTGATTCCCATTTGAG+TGG | 0.506280 | 2.4:-40646340 | MS.gene80868:CDS |
| TCAGTTCCATTATGGTTAGG+TGG | 0.507749 | 2.4:-40645794 | MS.gene80868:CDS |
| GAATCATGTGAACCATATTG+AGG | 0.508599 | 2.4:-40645738 | MS.gene80868:CDS |
| ATTGAAACTGAGATCAAGAA+AGG | 0.510298 | 2.4:+40646279 | None:intergenic |
| AGAAGCAAGTGAGTAAGATT+GGG | 0.511321 | 2.4:+40644879 | None:intergenic |
| TAAAATTTGAAAGAGAAGGA+TGG | 0.511613 | 2.4:+40646458 | None:intergenic |
| CAGTTCCATTATGGTTAGGT+GGG | 0.515601 | 2.4:-40645793 | MS.gene80868:CDS |
| CTTAGTCAAAATAAATTGCA+AGG | 0.519434 | 2.4:-40645074 | MS.gene80868:CDS |
| GAAAGTTTGCAAAGATGTGA+TGG | 0.519919 | 2.4:+40644465 | None:intergenic |
| TTTGCAGATTGAATTTGGAA+TGG | 0.520898 | 2.4:+40644833 | None:intergenic |
| GTGGGTAGCATGGATTCCTA+AGG | 0.521203 | 2.4:+40646545 | None:intergenic |
| ATTGGAGAGAATCAAATGTC+AGG | 0.521686 | 2.4:-40644570 | MS.gene80868:CDS |
| AAGTGACTTCATGTCCCCTA+TGG | 0.522932 | 2.4:+40644113 | None:intergenic |
| CCAAACTCCGTAGGAAAACT+GGG | 0.523249 | 2.4:-40645404 | MS.gene80868:CDS |
| ATCAGCTGCCGACATGGTTG+GGG | 0.524083 | 2.4:-40645556 | MS.gene80868:CDS |
| GAAAGCTGACCAAACGAGCT+TGG | 0.524383 | 2.4:+40644684 | None:intergenic |
| TATATAAAATTTGAAAGAGA+AGG | 0.526500 | 2.4:+40646454 | None:intergenic |
| CTATCCAACAACATGTTGAT+GGG | 0.528188 | 2.4:-40644423 | MS.gene80868:CDS |
| CAGTGATATGGTTCTTGGTG+AGG | 0.529342 | 2.4:+40644934 | None:intergenic |
| GTCGGTAATTTAGAATCTGC+AGG | 0.532057 | 2.4:-40645632 | MS.gene80868:CDS |
| GTGGGTCGACATATATTGAA+TGG | 0.537920 | 2.4:-40644326 | MS.gene80868:CDS |
| CATGAAGTCACTTGAATCGT+TGG | 0.538951 | 2.4:-40644103 | MS.gene80868:CDS |
| CTCACCAAGAACCATATCAC+TGG | 0.539385 | 2.4:-40644933 | MS.gene80868:CDS |
| TTAAGACTTTCCTCTTGGGA+AGG | 0.539491 | 2.4:-40646634 | MS.gene80868:CDS |
| GGTGAAATTCCTACAGCCAT+AGG | 0.539549 | 2.4:-40644129 | MS.gene80868:CDS |
| CTATGCAACCAAATGATGAA+TGG | 0.544148 | 2.4:+40646710 | None:intergenic |
| TTAGTCAAAATAAATTGCAA+GGG | 0.545801 | 2.4:-40645073 | MS.gene80868:CDS |
| GGTATCATCCCAAATAACCT+TGG | 0.546539 | 2.4:-40646319 | MS.gene80868:CDS |
| ACAAGTTTGTGAGGTTTCCA+AGG | 0.547102 | 2.4:+40646302 | None:intergenic |
| TGTCGACCCACTGGGTGCTA+AGG | 0.549772 | 2.4:+40644338 | None:intergenic |
| ATGATTAGAAGAAATAATCA+AGG | 0.552591 | 2.4:+40645226 | None:intergenic |
| TTCACATAAGCTAGTGACTT+GGG | 0.554559 | 2.4:+40644957 | None:intergenic |
| AATCATGTGAACCATATTGA+GGG | 0.554710 | 2.4:-40645737 | MS.gene80868:CDS |
| GAGACATGTCTAAATTGCGC+AGG | 0.558691 | 2.4:+40645018 | None:intergenic |
| GGTTCTATACCAACAATGCT+AGG | 0.559326 | 2.4:-40645716 | MS.gene80868:CDS |
| CATTCAAGTAATTGTTACCA+AGG | 0.559999 | 2.4:+40645435 | None:intergenic |
| ACTGGGAAATCTAATCCAGT+TGG | 0.562355 | 2.4:-40645387 | MS.gene80868:CDS |
| TTAAGACAAAACAAGTTCCA+AGG | 0.566867 | 2.4:-40644495 | MS.gene80868:CDS |
| GGGTCAATCCCACAATGCGT+TGG | 0.570335 | 2.4:-40644402 | MS.gene80868:CDS |
| GGAACTATACCTTCATGGAT+AGG | 0.570375 | 2.4:-40644549 | MS.gene80868:CDS |
| TCAATATATGTCGACCCACT+GGG | 0.571370 | 2.4:+40644330 | None:intergenic |
| CAAGAAAGGACAAGTTTGTG+AGG | 0.572697 | 2.4:+40646293 | None:intergenic |
| TTACAGCAATGATTCAAGGA+TGG | 0.573038 | 2.4:-40644374 | MS.gene80868:CDS |
| ATGATCATGACTGTGCATCT+TGG | 0.575129 | 2.4:+40646096 | None:intergenic |
| ATCTAATAACCACTTGTTTG+GGG | 0.575578 | 2.4:-40645360 | MS.gene80868:CDS |
| GTTGTTTGATAAATCCACAT+TGG | 0.576150 | 2.4:+40644233 | None:intergenic |
| TTCTAGCAAAGAAGGAAGCA+TGG | 0.577865 | 2.4:+40646144 | None:intergenic |
| GTAAAATTCCCAACGCATTG+TGG | 0.578536 | 2.4:+40644393 | None:intergenic |
| TTAGAATCTGCAGGATGCAA+CGG | 0.580225 | 2.4:-40645623 | MS.gene80868:CDS |
| ATTCAAGTAATTGTTACCAA+GGG | 0.580911 | 2.4:+40645436 | None:intergenic |
| ACAAGTGCTGTTATACTACA+AGG | 0.583497 | 2.4:+40645332 | None:intergenic |
| TTATCAAACAACAATTTGAG+TGG | 0.583575 | 2.4:-40644222 | MS.gene80868:CDS |
| TCAATGATCAGCTGCCGACA+TGG | 0.585266 | 2.4:-40645562 | MS.gene80868:CDS |
| CTGTTTCCTTAGCACCCAGT+GGG | 0.591754 | 2.4:-40644344 | MS.gene80868:CDS |
| AAAATGTCACCTATCCATGA+AGG | 0.592613 | 2.4:+40644540 | None:intergenic |
| TCTAATAACCACTTGTTTGG+GGG | 0.595833 | 2.4:-40645359 | MS.gene80868:CDS |
| AATGACTGTTGCAAATGGAA+AGG | 0.598156 | 2.4:-40646610 | MS.gene80868:CDS |
| GAATCGTTGGACCTCTCTCA+GGG | 0.601124 | 2.4:-40644090 | MS.gene80868:CDS |
| CTGAAAGTTGACCCTGAGAG+AGG | 0.610369 | 2.4:+40644079 | None:intergenic |
| GATGTGATGGAATGTAACCT+TGG | 0.610530 | 2.4:+40644478 | None:intergenic |
| GGAAAGGTCAAGCAATGTCA+AGG | 0.612768 | 2.4:+40645832 | None:intergenic |
| CTGGGTGCTAAGGAAACAGA+TGG | 0.614907 | 2.4:+40644348 | None:intergenic |
| TTTGAAATTTGTGGCCAATG+TGG | 0.616663 | 2.4:-40644247 | MS.gene80868:CDS |
| GGAACTATTCCAAACTCCGT+AGG | 0.619567 | 2.4:-40645413 | MS.gene80868:CDS |
| TCTGTTTCCTTAGCACCCAG+TGG | 0.619944 | 2.4:-40644345 | MS.gene80868:CDS |
| AAAACTTGAATGAAGTGTGA+GGG | 0.620128 | 2.4:+40645514 | None:intergenic |
| AAATATTTGGAATATGACCA+TGG | 0.620143 | 2.4:+40645489 | None:intergenic |
| GTATGAACAAGATGTCAGCC+AGG | 0.621852 | 2.4:-40644304 | MS.gene80868:CDS |
| TTCATGTCCCCTATGGCTGT+AGG | 0.626998 | 2.4:+40644120 | None:intergenic |
| TTGGTTGCATAGAACAAGAG+AGG | 0.627395 | 2.4:-40646699 | MS.gene80868:CDS |
| GAATAATAACAATCTTCATG+GGG | 0.628681 | 2.4:-40644640 | MS.gene80868:CDS |
| GTTCACATAAGCTAGTGACT+TGG | 0.629152 | 2.4:+40644956 | None:intergenic |
| ACAGTCATTTCCTTCCCAAG+AGG | 0.634143 | 2.4:+40646624 | None:intergenic |
| GTTAAACTAGACATGGTGTG+TGG | 0.637440 | 2.4:+40644048 | None:intergenic |
| TGAAATTCCTACAGCCATAG+GGG | 0.648001 | 2.4:-40644127 | MS.gene80868:CDS |
| TCACCAAGAACCATATCACT+GGG | 0.650500 | 2.4:-40644932 | MS.gene80868:CDS |
| ACTCTTCTCACTGCTTTACG+AGG | 0.651517 | 2.4:-40644180 | MS.gene80868:CDS |
| TAGAAAAGTTAAACTAGACA+TGG | 0.651658 | 2.4:+40644041 | None:intergenic |
| TAGTCAAAATAAATTGCAAG+GGG | 0.652533 | 2.4:-40645072 | MS.gene80868:CDS |
| TCAAGTTGCCCCAACCATGT+CGG | 0.657836 | 2.4:+40645548 | None:intergenic |
| TATCCAACAACATGTTGATG+GGG | 0.667795 | 2.4:-40644422 | MS.gene80868:CDS |
| CTTCAAGGAGATGCACTCGT+CGG | 0.668512 | 2.4:-40645650 | MS.gene80868:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAAAATTTGAAAGAGA+AGG | + | chr2.4:40644297-40644316 | None:intergenic | 15.0% |
| !!! | ATTTCTTCTAATCATTTTTA+TGG | - | chr2.4:40645530-40645549 | MS.gene80868:CDS | 15.0% |
| !! | ATGATTAGAAGAAATAATCA+AGG | + | chr2.4:40645525-40645544 | None:intergenic | 20.0% |
| !! | CTGAACAATAATAATTTAAC+TGG | - | chr2.4:40645458-40645477 | MS.gene80868:CDS | 20.0% |
| !! | TGAATAATAACAATCTTCAT+GGG | - | chr2.4:40646107-40646126 | MS.gene80868:CDS | 20.0% |
| !! | TTAGTCAAAATAAATTGCAA+GGG | - | chr2.4:40645675-40645694 | MS.gene80868:CDS | 20.0% |
| !! | TTCATAAAATGGATAAAAGT+TGG | + | chr2.4:40644369-40644388 | None:intergenic | 20.0% |
| !! | TTGAATAATAACAATCTTCA+TGG | - | chr2.4:40646106-40646125 | MS.gene80868:CDS | 20.0% |
| !! | TTTAAATTTCTCAAGAATGA+TGG | + | chr2.4:40646139-40646158 | None:intergenic | 20.0% |
| !!! | AAAGTTTACCAATATTTTGT+GGG | + | chr2.4:40645634-40645653 | None:intergenic | 20.0% |
| !!! | AACTGATTCAATTTTGTTTT+GGG | + | chr2.4:40644940-40644959 | None:intergenic | 20.0% |
| !!! | AATTTGAAATATTTAACCCT+TGG | - | chr2.4:40645296-40645315 | MS.gene80868:CDS | 20.0% |
| !!! | ATTCTAACTGATTCATAAAA+TGG | + | chr2.4:40644380-40644399 | None:intergenic | 20.0% |
| !!! | ATTTATTTTGACTAAGATAG+AGG | + | chr2.4:40645670-40645689 | None:intergenic | 20.0% |
| !!! | GTCATATTCCAAATATTTTT+GGG | - | chr2.4:40645264-40645283 | MS.gene80868:CDS | 20.0% |
| !!! | TACAAGAAATTTGAAATTTG+TGG | - | chr2.4:40646492-40646511 | MS.gene80868:CDS | 20.0% |
| !!! | TTTATTTTGACTAAGATAGA+GGG | + | chr2.4:40645669-40645688 | None:intergenic | 20.0% |
| ! | AAATTGAATCAGTTCCATTA+TGG | - | chr2.4:40644946-40644965 | MS.gene80868:CDS | 25.0% |
| ! | AATTCTAATTCTAGCAAAGA+AGG | + | chr2.4:40644615-40644634 | None:intergenic | 25.0% |
| ! | ATGAATTGTCCAATACAATT+AGG | + | chr2.4:40645491-40645510 | None:intergenic | 25.0% |
| ! | ATTCAAGTAATTGTTACCAA+GGG | + | chr2.4:40645315-40645334 | None:intergenic | 25.0% |
| ! | CAACTGTTAATCTTAGATAT+TGG | - | chr2.4:40646160-40646179 | MS.gene80868:CDS | 25.0% |
| ! | CTTAGTCAAAATAAATTGCA+AGG | - | chr2.4:40645674-40645693 | MS.gene80868:CDS | 25.0% |
| ! | CTTTCAGTGAACAAATTAAT+TGG | - | chr2.4:40645962-40645981 | MS.gene80868:CDS | 25.0% |
| ! | GAATAATAACAATCTTCATG+GGG | - | chr2.4:40646108-40646127 | MS.gene80868:CDS | 25.0% |
| ! | GACAATTTCCCAAAAATATT+TGG | + | chr2.4:40645275-40645294 | None:intergenic | 25.0% |
| ! | TAAAATTTGAAAGAGAAGGA+TGG | + | chr2.4:40644293-40644312 | None:intergenic | 25.0% |
| ! | TACTAAGACTATTGTTAGAA+AGG | + | chr2.4:40644794-40644813 | None:intergenic | 25.0% |
| ! | TAGAAAAGTTAAACTAGACA+TGG | + | chr2.4:40646710-40646729 | None:intergenic | 25.0% |
| ! | TAGTCAAAATAAATTGCAAG+GGG | - | chr2.4:40645676-40645695 | MS.gene80868:CDS | 25.0% |
| ! | TATCTAATAACCACTTGTTT+GGG | - | chr2.4:40645387-40645406 | MS.gene80868:CDS | 25.0% |
| ! | TTATCAAACAACAATTTGAG+TGG | - | chr2.4:40646526-40646545 | MS.gene80868:CDS | 25.0% |
| !! | AAATATTTGGAATATGACCA+TGG | + | chr2.4:40645262-40645281 | None:intergenic | 25.0% |
| !! | AATCTATGAGCAATATTTTG+GGG | + | chr2.4:40645848-40645867 | None:intergenic | 25.0% |
| !! | AATTTTACAGCAATGATTCA+AGG | - | chr2.4:40646370-40646389 | MS.gene80868:CDS | 25.0% |
| !! | CAATCTATGAGCAATATTTT+GGG | + | chr2.4:40645849-40645868 | None:intergenic | 25.0% |
| !! | GAAAGTTTACCAATATTTTG+TGG | + | chr2.4:40645635-40645654 | None:intergenic | 25.0% |
| !! | GGTCATATTCCAAATATTTT+TGG | - | chr2.4:40645263-40645282 | MS.gene80868:CDS | 25.0% |
| !! | TTGATTTTGCAGATTGAATT+TGG | + | chr2.4:40645923-40645942 | None:intergenic | 25.0% |
| !! | TTTTGTACCTCAATATTTCA+TGG | - | chr2.4:40644988-40645007 | MS.gene80868:CDS | 25.0% |
| !!! | AAATGGATAAAAGTTGGTAT+TGG | + | chr2.4:40644363-40644382 | None:intergenic | 25.0% |
| !!! | ATTCAATTTTGTTTTGGGAA+AGG | + | chr2.4:40644935-40644954 | None:intergenic | 25.0% |
| !!! | CAATTAATTTGTTCACTGAA+AGG | + | chr2.4:40645964-40645983 | None:intergenic | 25.0% |
| !!! | GAACTGATTCAATTTTGTTT+TGG | + | chr2.4:40644941-40644960 | None:intergenic | 25.0% |
| !!! | TTCAAGCTTATTTTTTGAGA+AGG | + | chr2.4:40644259-40644278 | None:intergenic | 25.0% |
| AAAAACTTGAATGAAGTGTG+AGG | + | chr2.4:40645238-40645257 | None:intergenic | 30.0% | |
| AAAACTTGAATGAAGTGTGA+GGG | + | chr2.4:40645237-40645256 | None:intergenic | 30.0% | |
| AAAAGTTGACCAAAACTATC+AGG | + | chr2.4:40645707-40645726 | None:intergenic | 30.0% | |
| AAACTTGACTCTCTTTATCT+TGG | - | chr2.4:40644843-40644862 | MS.gene80868:CDS | 30.0% | |
| AACTGAAATTGTTTCCACTA+AGG | + | chr2.4:40644335-40644354 | None:intergenic | 30.0% | |
| AAGATAAAGAGAGTCAAGTT+TGG | + | chr2.4:40644844-40644863 | None:intergenic | 30.0% | |
| AATCATGTGAACCATATTGA+GGG | - | chr2.4:40645011-40645030 | MS.gene80868:CDS | 30.0% | |
| AGACATGTCTCTAAACAATA+TGG | - | chr2.4:40645742-40645761 | MS.gene80868:CDS | 30.0% | |
| ATCATTAAGACTTTCCTCTT+GGG | - | chr2.4:40644110-40644129 | MS.gene80868:CDS | 30.0% | |
| ATCTAATAACCACTTGTTTG+GGG | - | chr2.4:40645388-40645407 | MS.gene80868:CDS | 30.0% | |
| ATGTTGTCAAAATTGACCTT+AGG | - | chr2.4:40644187-40644206 | MS.gene80868:CDS | 30.0% | |
| ATTGAAACTGAGATCAAGAA+AGG | + | chr2.4:40644472-40644491 | None:intergenic | 30.0% | |
| CAAACAAGTGGTTATTAGAT+AGG | + | chr2.4:40645388-40645407 | None:intergenic | 30.0% | |
| CATGATTCCATGAAATATTG+AGG | + | chr2.4:40644998-40645017 | None:intergenic | 30.0% | |
| CATTCAAGTAATTGTTACCA+AGG | + | chr2.4:40645316-40645335 | None:intergenic | 30.0% | |
| CTATCTAATAACCACTTGTT+TGG | - | chr2.4:40645386-40645405 | MS.gene80868:CDS | 30.0% | |
| CTGATCATTGAAATTGTTGT+TGG | + | chr2.4:40645177-40645196 | None:intergenic | 30.0% | |
| CTTAGTTATTTAGACCTTAG+TGG | - | chr2.4:40644318-40644337 | MS.gene80868:CDS | 30.0% | |
| CTTTCATCGAACAAATTATC+AGG | - | chr2.4:40646034-40646053 | MS.gene80868:CDS | 30.0% | |
| GATAATCTTCTCTTCTTTGT+GGG | + | chr2.4:40644224-40644243 | None:intergenic | 30.0% | |
| GGATATCTTCCTAATTGTAT+TGG | - | chr2.4:40645479-40645498 | MS.gene80868:CDS | 30.0% | |
| GTTGTTTGATAAATCCACAT+TGG | + | chr2.4:40646518-40646537 | None:intergenic | 30.0% | |
| TAACCTTAGAATCTGCATTA+GGG | + | chr2.4:40646236-40646255 | None:intergenic | 30.0% | |
| TGATAATCTTCTCTTCTTTG+TGG | + | chr2.4:40644225-40644244 | None:intergenic | 30.0% | |
| TTAACCTTAGAATCTGCATT+AGG | + | chr2.4:40646237-40646256 | None:intergenic | 30.0% | |
| TTAAGACAAAACAAGTTCCA+AGG | - | chr2.4:40646253-40646272 | MS.gene80868:CDS | 30.0% | |
| TTTGCAGATTGAATTTGGAA+TGG | + | chr2.4:40645918-40645937 | None:intergenic | 30.0% | |
| ! | CTTGGTAACAATTACTTGAA+TGG | - | chr2.4:40645314-40645333 | MS.gene80868:CDS | 30.0% |
| ! | GCAATCTATGAGCAATATTT+TGG | + | chr2.4:40645850-40645869 | None:intergenic | 30.0% |
| !! | AACCTTGATTTGTCAGAAAA+CGG | - | chr2.4:40645593-40645612 | MS.gene80868:CDS | 30.0% |
| !! | AGAGTTATTTCTCTAGGAAT+AGG | + | chr2.4:40646553-40646572 | None:intergenic | 30.0% |
| !! | TTTCTAAAAGCATTCAGATC+TGG | + | chr2.4:40644747-40644766 | None:intergenic | 30.0% |
| !!! | ATTTTTATGGTGTCATACCT+AGG | - | chr2.4:40645543-40645562 | MS.gene80868:CDS | 30.0% |
| !!! | CTTCATTCAAGTTTTTTCCA+TGG | - | chr2.4:40645242-40645261 | MS.gene80868:CDS | 30.0% |
| !!! | TTTTTTGAGAAGGAACAGTT+TGG | + | chr2.4:40644249-40644268 | None:intergenic | 30.0% |
| AAAATGTCACCTATCCATGA+AGG | + | chr2.4:40646211-40646230 | None:intergenic | 35.0% | |
| AAGAAGCAAGTGAGTAAGAT+TGG | + | chr2.4:40645873-40645892 | None:intergenic | 35.0% | |
| AAGGAAATGACTGTTGCAAA+TGG | - | chr2.4:40644133-40644152 | MS.gene80868:CDS | 35.0% | |
| AATCTTACTCACTTGCTTCT+TGG | - | chr2.4:40645872-40645891 | MS.gene80868:CDS | 35.0% | |
| AATGACTGTTGCAAATGGAA+AGG | - | chr2.4:40644138-40644157 | MS.gene80868:CDS | 35.0% | |
| AATGATTGCGTGACAGATTT+AGG | + | chr2.4:40646594-40646613 | None:intergenic | 35.0% | |
| AATGGGAATCAGAGATAGAA+AGG | + | chr2.4:40644404-40644423 | None:intergenic | 35.0% | |
| ACTTTCTGCTTTGCAAATCT+TGG | - | chr2.4:40646300-40646319 | MS.gene80868:CDS | 35.0% | |
| AGAAGCAAGTGAGTAAGATT+GGG | + | chr2.4:40645872-40645891 | None:intergenic | 35.0% | |
| ATAAGTTGCAGCAACATTAC+AGG | - | chr2.4:40644162-40644181 | MS.gene80868:CDS | 35.0% | |
| ATTGGAGAGAATCAAATGTC+AGG | - | chr2.4:40646178-40646197 | MS.gene80868:CDS | 35.0% | |
| CACATATTTCCTAGCATTGT+TGG | + | chr2.4:40645044-40645063 | None:intergenic | 35.0% | |
| CATCATTAAGACTTTCCTCT+TGG | - | chr2.4:40644109-40644128 | MS.gene80868:CDS | 35.0% | |
| CTATCCAACAACATGTTGAT+GGG | - | chr2.4:40646325-40646344 | MS.gene80868:CDS | 35.0% | |
| CTATGCAACCAAATGATGAA+TGG | + | chr2.4:40644041-40644060 | None:intergenic | 35.0% | |
| CTTGCAGATAATGAACTTGA+TGG | - | chr2.4:40644720-40644739 | MS.gene80868:CDS | 35.0% | |
| GAAAAACATCACTCAGGTAA+AGG | + | chr2.4:40644551-40644570 | None:intergenic | 35.0% | |
| GAAAGTTTGCAAAGATGTGA+TGG | + | chr2.4:40646286-40646305 | None:intergenic | 35.0% | |
| GAATCAGTTCCATTATGGTT+AGG | - | chr2.4:40644951-40644970 | MS.gene80868:CDS | 35.0% | |
| GAATCATGTGAACCATATTG+AGG | - | chr2.4:40645010-40645029 | MS.gene80868:CDS | 35.0% | |
| GACATCATCAGAGTGTAAAT+AGG | + | chr2.4:40644496-40644515 | None:intergenic | 35.0% | |
| GCACAATTACTCAACCAAAT+TGG | + | chr2.4:40644822-40644841 | None:intergenic | 35.0% | |
| GGTACAATCCCACAAAATAT+TGG | - | chr2.4:40645623-40645642 | MS.gene80868:CDS | 35.0% | |
| GTCTTAGTACAGTTCCAATT+TGG | - | chr2.4:40644805-40644824 | MS.gene80868:CDS | 35.0% | |
| TAAAATTCCCAACGCATTGT+GGG | + | chr2.4:40646357-40646376 | None:intergenic | 35.0% | |
| TATCCAACAACATGTTGATG+GGG | - | chr2.4:40646326-40646345 | MS.gene80868:CDS | 35.0% | |
| TCTAATAACCACTTGTTTGG+GGG | - | chr2.4:40645389-40645408 | MS.gene80868:CDS | 35.0% | |
| TCTATCCAACAACATGTTGA+TGG | - | chr2.4:40646324-40646343 | MS.gene80868:CDS | 35.0% | |
| TGAGGTTTCCAAGGTTATTT+GGG | + | chr2.4:40644440-40644459 | None:intergenic | 35.0% | |
| TTACAGCAATGATTCAAGGA+TGG | - | chr2.4:40646374-40646393 | MS.gene80868:CDS | 35.0% | |
| TTCACATAAGCTAGTGACTT+GGG | + | chr2.4:40645794-40645813 | None:intergenic | 35.0% | |
| TTGGAATGGAGTCATTTATG+AGG | + | chr2.4:40645904-40645923 | None:intergenic | 35.0% | |
| TTGGTATAGAACCCTCAATA+TGG | + | chr2.4:40645025-40645044 | None:intergenic | 35.0% | |
| ! | ACAAGTGCTGTTATACTACA+AGG | + | chr2.4:40645419-40645438 | None:intergenic | 35.0% |
| ! | ACACTCTGATGATGTCAATT+GGG | - | chr2.4:40644500-40644519 | MS.gene80868:CDS | 35.0% |
| ! | ACCTGAGTGATGTTTTTCTT+GGG | - | chr2.4:40644553-40644572 | MS.gene80868:CDS | 35.0% |
| ! | CTGACAAATCAAGGTTTTCT+AGG | + | chr2.4:40645589-40645608 | None:intergenic | 35.0% |
| ! | GAGGGCACAAAATTTATTCA+AGG | - | chr2.4:40644575-40644594 | MS.gene80868:CDS | 35.0% |
| ! | TACACTCTGATGATGTCAAT+TGG | - | chr2.4:40644499-40644518 | MS.gene80868:CDS | 35.0% |
| ! | TACCTGAGTGATGTTTTTCT+TGG | - | chr2.4:40644552-40644571 | MS.gene80868:CDS | 35.0% |
| ! | TAGATTTCCCAGTTTTCCTA+CGG | + | chr2.4:40645354-40645373 | None:intergenic | 35.0% |
| ! | TGAGTTGAATTCCAACAATC+AGG | + | chr2.4:40645995-40646014 | None:intergenic | 35.0% |
| ! | TTTGAAATTTGTGGCCAATG+TGG | - | chr2.4:40646501-40646520 | MS.gene80868:CDS | 35.0% |
| !! | GTGAGAAGAGTTATTTCTCT+AGG | + | chr2.4:40646559-40646578 | None:intergenic | 35.0% |
| ACAAGTTTGTGAGGTTTCCA+AGG | + | chr2.4:40644449-40644468 | None:intergenic | 40.0% | |
| ACTAATTGCTCAAGACTCCT+AGG | + | chr2.4:40645563-40645582 | None:intergenic | 40.0% | |
| ACTGGGAAATCTAATCCAGT+TGG | - | chr2.4:40645361-40645380 | MS.gene80868:CDS | 40.0% | |
| ATCTCTGATTCCCATTTGAG+TGG | - | chr2.4:40644408-40644427 | MS.gene80868:CDS | 40.0% | |
| ATGATCATGACTGTGCATCT+TGG | + | chr2.4:40644655-40644674 | None:intergenic | 40.0% | |
| CAAGAAAGGACAAGTTTGTG+AGG | + | chr2.4:40644458-40644477 | None:intergenic | 40.0% | |
| CAGTTCCATTATGGTTAGGT+GGG | - | chr2.4:40644955-40644974 | MS.gene80868:CDS | 40.0% | |
| CATGAAGTCACTTGAATCGT+TGG | - | chr2.4:40646645-40646664 | MS.gene80868:CDS | 40.0% | |
| CTTCTCTTCCTTTAATGACC+TGG | + | chr2.4:40646465-40646484 | None:intergenic | 40.0% | |
| CTTCTGTCACTAGATTTGTC+TGG | - | chr2.4:40645068-40645087 | MS.gene80868:CDS | 40.0% | |
| CTTGGAAGCAATGCTCTTAA+CGG | - | chr2.4:40644861-40644880 | MS.gene80868:CDS | 40.0% | |
| GGAACTATACCTTCATGGAT+AGG | - | chr2.4:40646199-40646218 | MS.gene80868:CDS | 40.0% | |
| GGTATCATCCCAAATAACCT+TGG | - | chr2.4:40644429-40644448 | MS.gene80868:CDS | 40.0% | |
| GGTTATTAGATAGGTCCAAC+TGG | + | chr2.4:40645379-40645398 | None:intergenic | 40.0% | |
| GGTTCTATACCAACAATGCT+AGG | - | chr2.4:40645032-40645051 | MS.gene80868:CDS | 40.0% | |
| GTAAAATTCCCAACGCATTG+TGG | + | chr2.4:40646358-40646377 | None:intergenic | 40.0% | |
| GTCAAATTTCGAAGAGCTGA+TGG | + | chr2.4:40644894-40644913 | None:intergenic | 40.0% | |
| GTCAGCTTTCAACTTTGCTA+TGG | - | chr2.4:40646077-40646096 | MS.gene80868:CDS | 40.0% | |
| GTGAAATTCCTACAGCCATA+GGG | - | chr2.4:40646620-40646639 | MS.gene80868:CDS | 40.0% | |
| GTGAGGTTTCCAAGGTTATT+TGG | + | chr2.4:40644441-40644460 | None:intergenic | 40.0% | |
| GTGGGTCGACATATATTGAA+TGG | - | chr2.4:40646422-40646441 | MS.gene80868:CDS | 40.0% | |
| GTTAAACTAGACATGGTGTG+TGG | + | chr2.4:40646703-40646722 | None:intergenic | 40.0% | |
| GTTCACATAAGCTAGTGACT+TGG | + | chr2.4:40645795-40645814 | None:intergenic | 40.0% | |
| GTTGGGGCAACTTGAAAATA+TGG | - | chr2.4:40645208-40645227 | MS.gene80868:CDS | 40.0% | |
| TCAATATATGTCGACCCACT+GGG | + | chr2.4:40646421-40646440 | None:intergenic | 40.0% | |
| TCACCAAGAACCATATCACT+GGG | - | chr2.4:40645816-40645835 | MS.gene80868:CDS | 40.0% | |
| TCAGTTCCATTATGGTTAGG+TGG | - | chr2.4:40644954-40644973 | MS.gene80868:CDS | 40.0% | |
| TCCCAAGAAAAACATCACTC+AGG | + | chr2.4:40644557-40644576 | None:intergenic | 40.0% | |
| TCTAACCCACCTAACCATAA+TGG | + | chr2.4:40644963-40644982 | None:intergenic | 40.0% | |
| TCTCCCTAATGCAGATTCTA+AGG | - | chr2.4:40646230-40646249 | MS.gene80868:CDS | 40.0% | |
| TGAAATTCCTACAGCCATAG+GGG | - | chr2.4:40646621-40646640 | MS.gene80868:CDS | 40.0% | |
| TGGGATGATACCACTCAAAT+GGG | + | chr2.4:40644421-40644440 | None:intergenic | 40.0% | |
| TGTCAGGAACTATACCTTCA+TGG | - | chr2.4:40646194-40646213 | MS.gene80868:CDS | 40.0% | |
| TTAAGACTTTCCTCTTGGGA+AGG | - | chr2.4:40644114-40644133 | MS.gene80868:CDS | 40.0% | |
| TTAGAATCTGCAGGATGCAA+CGG | - | chr2.4:40645125-40645144 | MS.gene80868:CDS | 40.0% | |
| TTCAATATATGTCGACCCAC+TGG | + | chr2.4:40646422-40646441 | None:intergenic | 40.0% | |
| TTCTAGCAAAGAAGGAAGCA+TGG | + | chr2.4:40644607-40644626 | None:intergenic | 40.0% | |
| TTGGCAACATTCCTGATTGT+TGG | - | chr2.4:40645981-40646000 | MS.gene80868:CDS | 40.0% | |
| TTGGGATGATACCACTCAAA+TGG | + | chr2.4:40644422-40644441 | None:intergenic | 40.0% | |
| TTGGTTGCATAGAACAAGAG+AGG | - | chr2.4:40644049-40644068 | MS.gene80868:CDS | 40.0% | |
| TTGTCAGAAAACGGTCTGAA+TGG | - | chr2.4:40645602-40645621 | MS.gene80868:CDS | 40.0% | |
| TTGTCTGGAAACAGACTTCA+AGG | - | chr2.4:40645083-40645102 | MS.gene80868:CDS | 40.0% | |
| ! | ATGCAACGGATCTGGTTTAA+AGG | - | chr2.4:40645139-40645158 | MS.gene80868:CDS | 40.0% |
| ! | CAAGCTCTTTTAGCACTCAA+AGG | - | chr2.4:40644072-40644091 | MS.gene80868:CDS | 40.0% |
| ! | CATCACTCAGGTAAAGGTTT+TGG | + | chr2.4:40644545-40644564 | None:intergenic | 40.0% |
| ! | GAAAGAGAAGGATGGATTTC+TGG | + | chr2.4:40644285-40644304 | None:intergenic | 40.0% |
| ! | GACCGTTTTCTGACAAATCA+AGG | + | chr2.4:40645598-40645617 | None:intergenic | 40.0% |
| ! | GAGTGATGTTTTTCTTGGGA+GGG | - | chr2.4:40644557-40644576 | MS.gene80868:CDS | 40.0% |
| ! | GATGTGATGGAATGTAACCT+TGG | + | chr2.4:40646273-40646292 | None:intergenic | 40.0% |
| ! | GGGGAATTTCCTGATAGTTT+TGG | - | chr2.4:40645695-40645714 | MS.gene80868:CDS | 40.0% |
| ! | GTCGGTAATTTAGAATCTGC+AGG | - | chr2.4:40645116-40645135 | MS.gene80868:CDS | 40.0% |
| ! | TGAGTGATGTTTTTCTTGGG+AGG | - | chr2.4:40644556-40644575 | MS.gene80868:CDS | 40.0% |
| AAGTGACTTCATGTCCCCTA+TGG | + | chr2.4:40646638-40646657 | None:intergenic | 45.0% | |
| ACAGTCATTTCCTTCCCAAG+AGG | + | chr2.4:40644127-40644146 | None:intergenic | 45.0% | |
| ACTCTTCTCACTGCTTTACG+AGG | - | chr2.4:40646568-40646587 | MS.gene80868:CDS | 45.0% | |
| CAGTGATATGGTTCTTGGTG+AGG | + | chr2.4:40645817-40645836 | None:intergenic | 45.0% | |
| CCAAACTCCGTAGGAAAACT+GGG | - | chr2.4:40645344-40645363 | MS.gene80868:CDS | 45.0% | |
| CTCACCAAGAACCATATCAC+TGG | - | chr2.4:40645815-40645834 | MS.gene80868:CDS | 45.0% | |
| CTGTCACGCAATCATTTGTC+AGG | - | chr2.4:40646598-40646617 | MS.gene80868:CDS | 45.0% | |
| GAGACATGTCTAAATTGCGC+AGG | + | chr2.4:40645733-40645752 | None:intergenic | 45.0% | |
| GATGTCAGCCAGGTCATTAA+AGG | - | chr2.4:40646454-40646473 | MS.gene80868:CDS | 45.0% | |
| GGAAAGGTCAAGCAATGTCA+AGG | + | chr2.4:40644919-40644938 | None:intergenic | 45.0% | |
| GGAACTATTCCAAACTCCGT+AGG | - | chr2.4:40645335-40645354 | MS.gene80868:CDS | 45.0% | |
| GGTGAAATTCCTACAGCCAT+AGG | - | chr2.4:40646619-40646638 | MS.gene80868:CDS | 45.0% | |
| GTATGAACAAGATGTCAGCC+AGG | - | chr2.4:40646444-40646463 | MS.gene80868:CDS | 45.0% | |
| TCCAAACTCCGTAGGAAAAC+TGG | - | chr2.4:40645343-40645362 | MS.gene80868:CDS | 45.0% | |
| TCTCTTCTTTGTGGGTAGCA+TGG | + | chr2.4:40644216-40644235 | None:intergenic | 45.0% | |
| TGACCCAGTGATATGGTTCT+TGG | + | chr2.4:40645822-40645841 | None:intergenic | 45.0% | |
| TGACCCCATCAACATGTTGT+TGG | + | chr2.4:40646332-40646351 | None:intergenic | 45.0% | |
| !! | GGTGTTATTCCAAGCTCGTT+TGG | - | chr2.4:40646055-40646074 | MS.gene80868:CDS | 45.0% |
| AAGGAAGACCCCCAAACAAG+TGG | + | chr2.4:40645400-40645419 | None:intergenic | 50.0% | |
| CTCTCTCAGGGTCAACTTTC+AGG | - | chr2.4:40646670-40646689 | MS.gene80868:CDS | 50.0% | |
| CTGAAAGTTGACCCTGAGAG+AGG | + | chr2.4:40646672-40646691 | None:intergenic | 50.0% | |
| CTGGGTGCTAAGGAAACAGA+TGG | + | chr2.4:40646403-40646422 | None:intergenic | 50.0% | |
| CTGTTTCCTTAGCACCCAGT+GGG | - | chr2.4:40646404-40646423 | MS.gene80868:CDS | 50.0% | |
| CTTCAAGGAGATGCACTCGT+CGG | - | chr2.4:40645098-40645117 | MS.gene80868:CDS | 50.0% | |
| GAAAGCTGACCAAACGAGCT+TGG | + | chr2.4:40646067-40646086 | None:intergenic | 50.0% | |
| GAATCGTTGGACCTCTCTCA+GGG | - | chr2.4:40646658-40646677 | MS.gene80868:CDS | 50.0% | |
| GGTCAATCCCACAATGCGTT+GGG | - | chr2.4:40646347-40646366 | MS.gene80868:CDS | 50.0% | |
| GTGGGTAGCATGGATTCCTA+AGG | + | chr2.4:40644206-40644225 | None:intergenic | 50.0% | |
| TCAATGATCAGCTGCCGACA+TGG | - | chr2.4:40645186-40645205 | MS.gene80868:CDS | 50.0% | |
| TCTGTTTCCTTAGCACCCAG+TGG | - | chr2.4:40646403-40646422 | MS.gene80868:CDS | 50.0% | |
| TGAATCGTTGGACCTCTCTC+AGG | - | chr2.4:40646657-40646676 | MS.gene80868:CDS | 50.0% | |
| TTCATGTCCCCTATGGCTGT+AGG | + | chr2.4:40646631-40646650 | None:intergenic | 50.0% | |
| ! | CCCAGTTTTCCTACGGAGTT+TGG | + | chr2.4:40645347-40645366 | None:intergenic | 50.0% |
| ! | TCAAGTTGCCCCAACCATGT+CGG | + | chr2.4:40645203-40645222 | None:intergenic | 50.0% |
| ATCAGCTGCCGACATGGTTG+GGG | - | chr2.4:40645192-40645211 | MS.gene80868:CDS | 55.0% | |
| GATCAGCTGCCGACATGGTT+GGG | - | chr2.4:40645191-40645210 | MS.gene80868:CDS | 55.0% | |
| GGGGAAGTGACCCAGTGATA+TGG | + | chr2.4:40645829-40645848 | None:intergenic | 55.0% | |
| GGGTCAATCCCACAATGCGT+TGG | - | chr2.4:40646346-40646365 | MS.gene80868:CDS | 55.0% | |
| TCTGCAGGATGCAACGGATC+TGG | - | chr2.4:40645131-40645150 | MS.gene80868:CDS | 55.0% | |
| TGATCAGCTGCCGACATGGT+TGG | - | chr2.4:40645190-40645209 | MS.gene80868:CDS | 55.0% | |
| TGTCGACCCACTGGGTGCTA+AGG | + | chr2.4:40646413-40646432 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 40644038 | 40646732 | 40644038 | ID=MS.gene80868 |
| chr2.4 | mRNA | 40644038 | 40646732 | 40644038 | ID=MS.gene80868.t1;Parent=MS.gene80868 |
| chr2.4 | exon | 40644038 | 40646732 | 40644038 | ID=MS.gene80868.t1.exon1;Parent=MS.gene80868.t1 |
| chr2.4 | CDS | 40644038 | 40646732 | 40644038 | ID=cds.MS.gene80868.t1;Parent=MS.gene80868.t1 |
| Gene Sequence |
| Protein sequence |
