Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80973.t1 | XP_024627930.1 | 67.3 | 446 | 128 | 3 | 1 | 446 | 1 | 428 | 8.90E-137 | 497.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80973.t1 | A0A396I0R2 | 66.1 | 531 | 107 | 6 | 1 | 518 | 1 | 471 | 7.9e-135 | 490.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05351 | MS.gene80973 | 0.833386 | 5.49E-56 | -1.69E-46 |
| MS.gene057814 | MS.gene80973 | 0.835031 | 2.13E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80973.t1 | MTR_0029s0140 | 82.517 | 143 | 25 | 0 | 376 | 518 | 241 | 383 | 5.84e-67 | 222 |
| MS.gene80973.t1 | MTR_0029s0140 | 82.051 | 78 | 14 | 0 | 168 | 245 | 162 | 239 | 2.42e-42 | 156 |
| MS.gene80973.t1 | MTR_2g102860 | 82.963 | 135 | 23 | 0 | 384 | 518 | 13 | 147 | 6.03e-66 | 211 |
| MS.gene80973.t1 | MTR_4g017750 | 82.394 | 142 | 21 | 1 | 377 | 518 | 110 | 247 | 6.44e-66 | 214 |
| MS.gene80973.t1 | MTR_2g020090 | 69.737 | 152 | 45 | 1 | 367 | 518 | 53 | 203 | 6.48e-66 | 213 |
| MS.gene80973.t1 | MTR_3g058800 | 73.050 | 141 | 37 | 1 | 378 | 518 | 10 | 149 | 2.19e-64 | 207 |
| MS.gene80973.t1 | MTR_5g080310 | 80.851 | 141 | 23 | 1 | 378 | 518 | 122 | 258 | 3.88e-63 | 207 |
| MS.gene80973.t1 | MTR_1g023240 | 75.658 | 152 | 31 | 1 | 365 | 516 | 23 | 168 | 2.10e-61 | 203 |
| MS.gene80973.t1 | MTR_6g463490 | 83.186 | 113 | 19 | 0 | 406 | 518 | 3 | 115 | 6.99e-61 | 197 |
| MS.gene80973.t1 | MTR_4g023110 | 73.134 | 134 | 35 | 1 | 376 | 509 | 7 | 139 | 2.33e-60 | 196 |
| MS.gene80973.t1 | MTR_8g027455 | 61.290 | 124 | 46 | 2 | 377 | 499 | 24 | 146 | 1.23e-41 | 155 |
| MS.gene80973.t1 | MTR_1g077650 | 66.346 | 104 | 34 | 1 | 377 | 480 | 46 | 148 | 8.21e-40 | 143 |
| MS.gene80973.t1 | MTR_7g035425 | 37.576 | 165 | 88 | 5 | 184 | 336 | 179 | 340 | 1.50e-24 | 105 |
| MS.gene80973.t1 | MTR_7g037680 | 29.858 | 211 | 116 | 5 | 289 | 498 | 17 | 196 | 1.26e-19 | 89.0 |
| MS.gene80973.t1 | MTR_2g077640 | 29.032 | 217 | 110 | 7 | 246 | 458 | 34 | 210 | 1.18e-17 | 83.2 |
| MS.gene80973.t1 | MTR_5g053700 | 81.250 | 48 | 5 | 1 | 470 | 517 | 1 | 44 | 1.42e-17 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 168 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCTGGTTTAGGCTCTTTC+AGG | 0.183435 | 7.3:+90853631 | MS.gene80973:CDS |
| CATGATTGAGGGTTAGTCTT+AGG | 0.184506 | 7.3:-90855414 | None:intergenic |
| CGGATTTGTTGTTGGGAAAA+AGG | 0.185562 | 7.3:-90853233 | None:intergenic |
| TGTGGGAGGGACCTTGAGCC+TGG | 0.232485 | 7.3:-90855606 | None:intergenic |
| TGGAGGGATTTGTTGTTGTT+GGG | 0.261186 | 7.3:-90853198 | None:intergenic |
| GTGGAGGGATTTGTTGTTGT+TGG | 0.265730 | 7.3:-90853199 | None:intergenic |
| CTGGCGTCAGCTCAGGCTGC+TGG | 0.280344 | 7.3:-90855450 | None:intergenic |
| TGATCAATTGGTTAAGTATT+GGG | 0.285226 | 7.3:+90853895 | MS.gene80973:CDS |
| TATGGCACCATACCTCCTTA+TGG | 0.295998 | 7.3:+90853110 | MS.gene80973:CDS |
| TTGCCCTTGCTCTTTCCATT+AGG | 0.302043 | 7.3:-90852852 | None:intergenic |
| CCCGCCTATCTTTGATCAAT+TGG | 0.302825 | 7.3:+90853883 | MS.gene80973:CDS |
| ATAACTGCTATCATCACTTT+TGG | 0.303053 | 7.3:+90853573 | MS.gene80973:CDS |
| TTGCTCTTTCCATTAGGTTT+CGG | 0.328125 | 7.3:-90852846 | None:intergenic |
| TAATGCAGACCAAGTGTTCT+TGG | 0.346146 | 7.3:+90853735 | MS.gene80973:intron |
| CCGGTTCTTCTTTGCTTTGT+CGG | 0.346522 | 7.3:-90853942 | None:intergenic |
| CTTGCCGAGGCTATTTCTAA+TGG | 0.350981 | 7.3:+90855265 | MS.gene80973:CDS |
| CCAGTACATCCTGGATATTA+TGG | 0.365206 | 7.3:+90853092 | MS.gene80973:CDS |
| TCCTCCTCATCTACCGGATA+AGG | 0.372127 | 7.3:-90855661 | None:intergenic |
| TCTTCTAGCCAGGGATCACC+TGG | 0.378638 | 7.3:+90852984 | MS.gene80973:CDS |
| GGATTTGTTGTTGTTGGGGA+AGG | 0.379887 | 7.3:-90853193 | None:intergenic |
| CGCATCTCTGGCGTCAGCTC+AGG | 0.380128 | 7.3:-90855457 | None:intergenic |
| CGAGAATCTCTCGGATAATC+CGG | 0.382446 | 7.3:-90853395 | None:intergenic |
| TTGATCAATTGGTTAAGTAT+TGG | 0.389666 | 7.3:+90853894 | MS.gene80973:CDS |
| ATGATTGAGGGTTAGTCTTA+GGG | 0.390145 | 7.3:-90855413 | None:intergenic |
| ATTTGTTGTTGTTGGGGAAG+GGG | 0.399109 | 7.3:-90853191 | None:intergenic |
| ATCTGCTGCATCTTCTAGCC+AGG | 0.410992 | 7.3:+90852974 | MS.gene80973:CDS |
| TTGTGGACGGATTTGTTGTT+GGG | 0.411777 | 7.3:-90853240 | None:intergenic |
| GTTGTTGTTGGGGAAGGGGA+AGG | 0.412477 | 7.3:-90853187 | None:intergenic |
| GAAGAACCGGGCGTCGGAAA+AGG | 0.413034 | 7.3:+90853955 | MS.gene80973:CDS |
| GCTATACGGTCTTGGTAACT+TGG | 0.413255 | 7.3:+90855357 | MS.gene80973:CDS |
| TTGTCTCCTCATACCGCATA+CGG | 0.417890 | 7.3:-90853838 | None:intergenic |
| TGAATAAGCTCCCGCATCTC+TGG | 0.423368 | 7.3:-90855469 | None:intergenic |
| CCGACAAAGCAAAGAAGAAC+CGG | 0.424122 | 7.3:+90853942 | MS.gene80973:CDS |
| ATGGCACCATACCTCCTTAT+GGG | 0.425132 | 7.3:+90853111 | MS.gene80973:CDS |
| CAGGAGCAGCTACACTAGCC+TGG | 0.433549 | 7.3:-90853013 | None:intergenic |
| AGGAGCAGCTGGCTCAGTTT+AGG | 0.434219 | 7.3:+90855578 | MS.gene80973:CDS |
| AATGCAGACCAAGTGTTCTT+GGG | 0.435174 | 7.3:+90853736 | MS.gene80973:intron |
| GTTGTTGTTGGGGAACAGGT+GGG | 0.436449 | 7.3:-90853268 | None:intergenic |
| TTGCCGAGGCTATTTCTAAT+GGG | 0.436783 | 7.3:+90855266 | MS.gene80973:CDS |
| TGAGCTGACGCCAGAGATGC+GGG | 0.441007 | 7.3:+90855459 | MS.gene80973:CDS |
| CCTCCTCATCTACCGGATAA+GGG | 0.441831 | 7.3:-90855660 | None:intergenic |
| GGAATGCCTCCGAAACCTAA+TGG | 0.442258 | 7.3:+90852837 | None:intergenic |
| TCGTGAAGCTCGTTAATAAA+CGG | 0.445154 | 7.3:-90854147 | None:intergenic |
| TGTTGTTGTTGGGGAACAGG+TGG | 0.447449 | 7.3:-90853269 | None:intergenic |
| TGGCGTCAGCTCAGGCTGCT+GGG | 0.447507 | 7.3:-90855449 | None:intergenic |
| TTTCTTGTTGGGGCTGTGGT+GGG | 0.448866 | 7.3:-90853322 | None:intergenic |
| AAGAAGAAGGGAAAGCTATA+CGG | 0.450481 | 7.3:+90855343 | MS.gene80973:CDS |
| GCGGTATAATACGCACTTAG+TGG | 0.451303 | 7.3:+90852884 | MS.gene80973:CDS |
| CCATAATATCCAGGATGTAC+TGG | 0.458343 | 7.3:-90853092 | None:intergenic |
| GTTGTGGACGGATTTGTTGT+TGG | 0.460674 | 7.3:-90853241 | None:intergenic |
| TTAACCAATTGATCAAAGAT+AGG | 0.461920 | 7.3:-90853887 | None:intergenic |
| GATCTGATTGCTTCAGCAGC+CGG | 0.463673 | 7.3:-90853542 | None:intergenic |
| GGGAGGACCCAGGTGATCCC+TGG | 0.467266 | 7.3:-90852992 | None:intergenic |
| AGGACCCTTCACCATGATTG+AGG | 0.467659 | 7.3:-90855426 | None:intergenic |
| AGAAAGCGGCCGCATTGGAT+TGG | 0.468839 | 7.3:+90853860 | MS.gene80973:CDS |
| GATTTGTTGTTGTTGGGGAA+GGG | 0.469554 | 7.3:-90853192 | None:intergenic |
| AGACAAGAAAGCGGCCGCAT+TGG | 0.471247 | 7.3:+90853855 | MS.gene80973:CDS |
| ACCGGATAAGGGTCAACATT+GGG | 0.473537 | 7.3:-90855649 | None:intergenic |
| AAGGGAAAGCTATACGGTCT+TGG | 0.480141 | 7.3:+90855349 | MS.gene80973:CDS |
| GCTCCTCATATGACCTTTGA+CGG | 0.484551 | 7.3:-90855561 | None:intergenic |
| GGAGGGATTTGTTGTTGTTG+GGG | 0.486144 | 7.3:-90853197 | None:intergenic |
| TAGCACGCTCGTCGCAGTAT+TGG | 0.486252 | 7.3:-90854194 | None:intergenic |
| CACACCTTCCCAAGAACACT+TGG | 0.486595 | 7.3:-90853744 | None:intergenic |
| TTGATGCAACACTACCCTTC+CGG | 0.489648 | 7.3:-90855390 | None:intergenic |
| CGGAGAGCACGCTGAGCGTA+TGG | 0.490492 | 7.3:+90854012 | MS.gene80973:CDS |
| TCCCAATGTTGACCCTTATC+CGG | 0.490951 | 7.3:+90855648 | MS.gene80973:CDS |
| GGGATCACCTGGGTCCTCCC+AGG | 0.492872 | 7.3:+90852995 | MS.gene80973:CDS |
| GGCTCAGTTTAGGCAAGCCC+AGG | 0.496816 | 7.3:+90855588 | MS.gene80973:CDS |
| TTGGGCGTCTGAGGCGTTCA+AGG | 0.500299 | 7.3:+90853913 | MS.gene80973:CDS |
| AAGAACCGGGCGTCGGAAAA+GGG | 0.501037 | 7.3:+90853956 | MS.gene80973:CDS |
| CTCTTTCCATTAGGTTTCGG+AGG | 0.502358 | 7.3:-90852843 | None:intergenic |
| GCAGTAGAAATGACAGGGAT+CGG | 0.504341 | 7.3:-90852933 | None:intergenic |
| GAAAGAGCAAGGGCAACAGC+AGG | 0.505028 | 7.3:+90852859 | MS.gene80973:CDS |
| ATTCTTTGACCTTCAACACT+TGG | 0.510375 | 7.3:+90855302 | MS.gene80973:CDS |
| GCAGGAGCAGAAGCCGTCGC+AGG | 0.511679 | 7.3:-90853032 | None:intergenic |
| AAGATTTGCTTAACCGTCAA+AGG | 0.511841 | 7.3:+90855548 | MS.gene80973:CDS |
| TGAGGAGCAGAAGCCGTCGC+AGG | 0.513097 | 7.3:-90853050 | None:intergenic |
| TGAAGAGGGTGGTGGAGAGC+TGG | 0.513160 | 7.3:+90853352 | MS.gene80973:CDS |
| AATACTGCGACGAGCGTGCT+AGG | 0.515851 | 7.3:+90854196 | MS.gene80973:CDS |
| TGTTGTTGTTGGGGTTGTGG+TGG | 0.516082 | 7.3:-90853296 | None:intergenic |
| AAGAGCCCGTATGCGGTATG+AGG | 0.520621 | 7.3:+90853832 | MS.gene80973:CDS |
| ATGATAGCAGTTATGAATGA+TGG | 0.523463 | 7.3:-90853564 | None:intergenic |
| GTGGGAGGGACCTTGAGCCT+GGG | 0.524940 | 7.3:-90855605 | None:intergenic |
| GCTTCAGCAGCCGGTTTGCA+AGG | 0.525763 | 7.3:-90853533 | None:intergenic |
| CAGTAGAAATGACAGGGATC+GGG | 0.530289 | 7.3:-90852932 | None:intergenic |
| GGACCCTTCACCATGATTGA+GGG | 0.531656 | 7.3:-90855425 | None:intergenic |
| TACTGGAGGGCACATGTAAG+TGG | 0.532234 | 7.3:-90853075 | None:intergenic |
| CCAATTGATCAAAGATAGGC+GGG | 0.535490 | 7.3:-90853883 | None:intergenic |
| GTAGATGCAGTAGAAATGAC+AGG | 0.540103 | 7.3:-90852939 | None:intergenic |
| AGGAGCAGCTACACTAGCCT+GGG | 0.541346 | 7.3:-90853012 | None:intergenic |
| TAACCGTCAAAGGTCATATG+AGG | 0.541572 | 7.3:+90855558 | MS.gene80973:CDS |
| GAAGGTCCCATAAGGAGGTA+TGG | 0.543026 | 7.3:-90853117 | None:intergenic |
| TTAAAAGCGGCGCACTAGTG+TGG | 0.545514 | 7.3:-90855624 | None:intergenic |
| GGAGGAAGGAAGGTCCCATA+AGG | 0.547026 | 7.3:-90853125 | None:intergenic |
| AAGGTCATATGAGGAGCAGC+TGG | 0.548144 | 7.3:+90855567 | MS.gene80973:CDS |
| TTAATTGCTCTTGCGTCAAA+CGG | 0.548902 | 7.3:-90855492 | None:intergenic |
| GACGGCTTCTGCTCCTGCGA+CGG | 0.550829 | 7.3:+90853037 | MS.gene80973:CDS |
| TAAAAGCGGCGCACTAGTGT+GGG | 0.551339 | 7.3:-90855623 | None:intergenic |
| AACATAAGTATCACAAGAGT+AGG | 0.552062 | 7.3:-90855782 | None:intergenic |
| CTGAGCTGACGCCAGAGATG+CGG | 0.553348 | 7.3:+90855458 | MS.gene80973:CDS |
| AAATAGCCTCGGCAAGCTGC+CGG | 0.555959 | 7.3:-90855258 | None:intergenic |
| ATGTGCCCTCCAGTACATCC+TGG | 0.557262 | 7.3:+90853083 | MS.gene80973:CDS |
| CGAGCGTGCTAGGAGTGTGC+AGG | 0.557294 | 7.3:+90854206 | MS.gene80973:CDS |
| AGTTGCTGGAGACAAGAAGA+AGG | 0.557374 | 7.3:+90855330 | MS.gene80973:CDS |
| CAAGAAAATGTGCTTGAAGA+GGG | 0.558392 | 7.3:+90853338 | MS.gene80973:CDS |
| ATAGGCTAGGAGGTTACGTC+GGG | 0.559517 | 7.3:+90854122 | MS.gene80973:intron |
| TGTCTCCTCATACCGCATAC+GGG | 0.561367 | 7.3:-90853837 | None:intergenic |
| TTTAGGCAAGCCCAGGCTCA+AGG | 0.561956 | 7.3:+90855595 | MS.gene80973:CDS |
| CTAAGACTAACCCTCAATCA+TGG | 0.562434 | 7.3:+90855415 | MS.gene80973:CDS |
| GGTATGGTGCCATAATATCC+AGG | 0.563962 | 7.3:-90853101 | None:intergenic |
| GCAAGGGCAACAGCAGGAAG+CGG | 0.568162 | 7.3:+90852865 | MS.gene80973:CDS |
| GTAACTTGGCTGCTAACTAC+CGG | 0.570124 | 7.3:+90855371 | MS.gene80973:CDS |
| TCTGCTGCATCTTCTAGCCA+GGG | 0.572703 | 7.3:+90852975 | MS.gene80973:CDS |
| ACGCTCGTCGCAGTATTGGC+CGG | 0.572743 | 7.3:-90854190 | None:intergenic |
| TACCGGATAAGGGTCAACAT+TGG | 0.575351 | 7.3:-90855650 | None:intergenic |
| GGTTAAGTATTGGGCGTCTG+AGG | 0.575914 | 7.3:+90853904 | MS.gene80973:CDS |
| TAGTGTAGCTGCTCCTGCGA+CGG | 0.577442 | 7.3:+90853019 | MS.gene80973:CDS |
| AGCAAAGAAGAACCGGGCGT+CGG | 0.582886 | 7.3:+90853949 | MS.gene80973:CDS |
| TTGAACAGGAGGAGTATGAC+CGG | 0.586858 | 7.3:+90855239 | MS.gene80973:intron |
| GAGAATCTCTCGGATAATCC+GGG | 0.586945 | 7.3:-90853394 | None:intergenic |
| CTAACCCTCAATCATGGTGA+AGG | 0.587704 | 7.3:+90855421 | MS.gene80973:CDS |
| ATGAAAGCTCGGAGGAAGGA+AGG | 0.588058 | 7.3:-90853135 | None:intergenic |
| CTTAGTGGACGCAGCGACAG+AGG | 0.588697 | 7.3:+90852899 | MS.gene80973:CDS |
| TGAACTTACGAGTTTCCACT+AGG | 0.589440 | 7.3:-90853437 | None:intergenic |
| AGAGCAATTAACACAACAGA+TGG | 0.589765 | 7.3:+90855504 | MS.gene80973:CDS |
| GGGCACATGTAAGTGGGATG+AGG | 0.589794 | 7.3:-90853068 | None:intergenic |
| ACAAGAAAATGTGCTTGAAG+AGG | 0.591010 | 7.3:+90853337 | MS.gene80973:CDS |
| GAAACCTAATGGAAAGAGCA+AGG | 0.595131 | 7.3:+90852848 | MS.gene80973:CDS |
| TATGGTGGTAAATGAAAGCT+CGG | 0.597302 | 7.3:-90853146 | None:intergenic |
| CTTGTGACAAATAGGCTAGG+AGG | 0.600406 | 7.3:+90854112 | MS.gene80973:intron |
| AAGCGGCGCACTAGTGTGGG+AGG | 0.600468 | 7.3:-90855620 | None:intergenic |
| GTATGACCGGCAGCTTGCCG+AGG | 0.601524 | 7.3:+90855252 | MS.gene80973:CDS |
| CGACAAAGCAAAGAAGAACC+GGG | 0.601764 | 7.3:+90853943 | MS.gene80973:CDS |
| CAGACCAAGTGTTCTTGGGA+AGG | 0.615925 | 7.3:+90853740 | MS.gene80973:intron |
| ACCAATTGATCAAAGATAGG+CGG | 0.621825 | 7.3:-90853884 | None:intergenic |
| TAATATCCAGGATGTACTGG+AGG | 0.622903 | 7.3:-90853089 | None:intergenic |
| CTTGGCTGCTAACTACCGGA+AGG | 0.625442 | 7.3:+90855375 | MS.gene80973:CDS |
| CTTCTAGCCAGGGATCACCT+GGG | 0.625749 | 7.3:+90852985 | MS.gene80973:CDS |
| TACTTAGAAGAGCCCGTATG+CGG | 0.626682 | 7.3:+90853825 | MS.gene80973:CDS |
| GTAAATGAAAGCTCGGAGGA+AGG | 0.630697 | 7.3:-90853139 | None:intergenic |
| GTTGCTGGAGACAAGAAGAA+GGG | 0.632114 | 7.3:+90855331 | MS.gene80973:CDS |
| AATAGGCTAGGAGGTTACGT+CGG | 0.632889 | 7.3:+90854121 | MS.gene80973:intron |
| AATCGACGACGAGAATCTCT+CGG | 0.634346 | 7.3:-90853404 | None:intergenic |
| AATGTGCTTGAAGAGGGTGG+TGG | 0.635912 | 7.3:+90853344 | MS.gene80973:CDS |
| GGAAGGAAGGTCCCATAAGG+AGG | 0.636273 | 7.3:-90853122 | None:intergenic |
| TAACCCTCAATCATGGTGAA+GGG | 0.637969 | 7.3:+90855422 | MS.gene80973:CDS |
| TGTGGTGGGACTGAATATGG+TGG | 0.638237 | 7.3:-90853161 | None:intergenic |
| AAACCTAATGGAAAGAGCAA+GGG | 0.642664 | 7.3:+90852849 | MS.gene80973:CDS |
| ACACTAGCCTGGGAGGACCC+AGG | 0.643294 | 7.3:-90853002 | None:intergenic |
| AGACCCATTAGAAATAGCCT+CGG | 0.644902 | 7.3:-90855269 | None:intergenic |
| ACTGGTGGTTGCTTAAGCAA+CGG | 0.650281 | 7.3:+90853992 | MS.gene80973:CDS |
| CGTCAGCTCAGGCTGCTGGG+AGG | 0.651312 | 7.3:-90855446 | None:intergenic |
| TTGGAAGACATATGGTGATG+TGG | 0.652180 | 7.3:+90853592 | MS.gene80973:CDS |
| ACAACAGATGGCAAGTCAAG+CGG | 0.653147 | 7.3:+90855516 | MS.gene80973:CDS |
| TCAACATTGGGACTTAAAAG+CGG | 0.653227 | 7.3:-90855637 | None:intergenic |
| AGCGGCGCACTAGTGTGGGA+GGG | 0.654626 | 7.3:-90855619 | None:intergenic |
| AGCAGCTACACTAGCCTGGG+AGG | 0.655945 | 7.3:-90853009 | None:intergenic |
| TTGGCTGCTAACTACCGGAA+GGG | 0.659168 | 7.3:+90855376 | MS.gene80973:CDS |
| GGAGGATGCATTCACACTGG+TGG | 0.660778 | 7.3:+90853977 | MS.gene80973:CDS |
| AACCGGGCGTCGGAAAAGGG+AGG | 0.663571 | 7.3:+90853959 | MS.gene80973:CDS |
| AAGGGAGGATGCATTCACAC+TGG | 0.674246 | 7.3:+90853974 | MS.gene80973:CDS |
| GAAAATGTGCTTGAAGAGGG+TGG | 0.683774 | 7.3:+90853341 | MS.gene80973:CDS |
| AATATCCAGGATGTACTGGA+GGG | 0.686056 | 7.3:-90853088 | None:intergenic |
| TAGATGCAGTAGAAATGACA+GGG | 0.708529 | 7.3:-90852938 | None:intergenic |
| ACTGGAGGGCACATGTAAGT+GGG | 0.711086 | 7.3:-90853074 | None:intergenic |
| ATAGGCGGGCCAATCCAATG+CGG | 0.767887 | 7.3:-90853869 | None:intergenic |
| GGTGGTAAATGAAAGCTCGG+AGG | 0.772025 | 7.3:-90853143 | None:intergenic |
| GGTATGAGGAGACAAGAAAG+CGG | 0.784010 | 7.3:+90853846 | MS.gene80973:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATAACCAAATATTTA+AGG | - | chr7.3:90855221-90855240 | None:intergenic | 10.0% |
| !! | ACAATAAAAATTAAATGATA+TGG | - | chr7.3:90854067-90854086 | None:intergenic | 10.0% |
| !!! | TTTTGATAATAAACAAAATA+AGG | - | chr7.3:90855132-90855151 | None:intergenic | 10.0% |
| !! | AATTCGGATTAAAAAAAATG+TGG | - | chr7.3:90854321-90854340 | None:intergenic | 20.0% |
| !! | TATAAAGATTAAGAACACAT+TGG | - | chr7.3:90854959-90854978 | None:intergenic | 20.0% |
| !! | TATTTGGTTATTATTTGAAC+AGG | + | chr7.3:90855225-90855244 | MS.gene80973:intron | 20.0% |
| !!! | ATTTTTTTTAATCCGAATTG+TGG | + | chr7.3:90854322-90854341 | MS.gene80973:intron | 20.0% |
| !!! | TTTTATTTCTTGTGACAAAT+AGG | + | chr7.3:90854104-90854123 | MS.gene80973:intron | 20.0% |
| ! | AAGGAAACTAATCATAAGAA+TGG | - | chr7.3:90855113-90855132 | None:intergenic | 25.0% |
| ! | GAAAACTATATAGAATCAAG+TGG | - | chr7.3:90854870-90854889 | None:intergenic | 25.0% |
| ! | GCTTTATCTATTTCATTTCT+AGG | + | chr7.3:90855718-90855737 | MS.gene80973:intron | 25.0% |
| ! | TGATCAATTGGTTAAGTATT+GGG | + | chr7.3:90853895-90853914 | MS.gene80973:CDS | 25.0% |
| ! | TTAACCAATTGATCAAAGAT+AGG | - | chr7.3:90853890-90853909 | None:intergenic | 25.0% |
| ! | TTGATCAATTGGTTAAGTAT+TGG | + | chr7.3:90853894-90853913 | MS.gene80973:CDS | 25.0% |
| ! | TTTGTCAATCTAATGAAATG+AGG | + | chr7.3:90854644-90854663 | MS.gene80973:intron | 25.0% |
| !! | TAGAATTTAGAACTTATCAC+AGG | + | chr7.3:90854924-90854943 | MS.gene80973:intron | 25.0% |
| !!! | GATTTTATAGTCAGTTTTGT+GGG | + | chr7.3:90854687-90854706 | MS.gene80973:intron | 25.0% |
| !!! | TGCACTATTTTTTTTAAGTG+TGG | + | chr7.3:90854370-90854389 | MS.gene80973:intron | 25.0% |
| AAAACACACAAAAATAGGTC+CGG | + | chr7.3:90854171-90854190 | MS.gene80973:CDS | 30.0% | |
| AACATAAGTATCACAAGAGT+AGG | - | chr7.3:90855785-90855804 | None:intergenic | 30.0% | |
| AATAACAGAGAAACAGTGTA+AGG | - | chr7.3:90855181-90855200 | None:intergenic | 30.0% | |
| ACGACAAAACACACAAAAAT+AGG | + | chr7.3:90854166-90854185 | MS.gene80973:CDS | 30.0% | |
| ATGATAGCAGTTATGAATGA+TGG | - | chr7.3:90853567-90853586 | None:intergenic | 30.0% | |
| CAAATATTTAAGGACAGAAC+TGG | - | chr7.3:90855211-90855230 | None:intergenic | 30.0% | |
| CAGTTCTGTCCTTAAATATT+TGG | + | chr7.3:90855209-90855228 | MS.gene80973:intron | 30.0% | |
| GGTTTCTGTCAAAAAAATTG+AGG | + | chr7.3:90854665-90854684 | MS.gene80973:intron | 30.0% | |
| TGATGAGGATTGAAGTTTAT+TGG | + | chr7.3:90855696-90855715 | MS.gene80973:intron | 30.0% | |
| TTGGTTATTATTTGAACAGG+AGG | + | chr7.3:90855228-90855247 | MS.gene80973:intron | 30.0% | |
| ! | ATAACTGCTATCATCACTTT+TGG | + | chr7.3:90853573-90853592 | MS.gene80973:CDS | 30.0% |
| ! | ATTTCTAGGTCTGTAATTTG+GGG | + | chr7.3:90855732-90855751 | MS.gene80973:intron | 30.0% |
| ! | CATTTCTAGGTCTGTAATTT+GGG | + | chr7.3:90855731-90855750 | MS.gene80973:intron | 30.0% |
| ! | GGATTTTATAGTCAGTTTTG+TGG | + | chr7.3:90854686-90854705 | MS.gene80973:intron | 30.0% |
| ! | GTTGTTTAATGATGTTTTCC+CGG | + | chr7.3:90853376-90853395 | MS.gene80973:CDS | 30.0% |
| ! | TCATTTCTAGGTCTGTAATT+TGG | + | chr7.3:90855730-90855749 | MS.gene80973:intron | 30.0% |
| ! | TTCAAGCACATTTTCTTGTT+GGG | - | chr7.3:90853336-90853355 | None:intergenic | 30.0% |
| ! | TTTGATGATACGAAACTGAA+CGG | + | chr7.3:90854417-90854436 | MS.gene80973:intron | 30.0% |
| ! | TTTTCTTGCAATCACATAAC+AGG | - | chr7.3:90855047-90855066 | None:intergenic | 30.0% |
| !!! | AACTTTTTTCCAAGTGTTGA+AGG | - | chr7.3:90855314-90855333 | None:intergenic | 30.0% |
| AAACCTAATGGAAAGAGCAA+GGG | + | chr7.3:90852849-90852868 | MS.gene80973:CDS | 35.0% | |
| AACACTTGGAAAAAAGTTGC+TGG | + | chr7.3:90855316-90855335 | MS.gene80973:CDS | 35.0% | |
| AACCTACTGCCTTAATTGTA+TGG | + | chr7.3:90854613-90854632 | MS.gene80973:intron | 35.0% | |
| AAGAAGAAGGGAAAGCTATA+CGG | + | chr7.3:90855343-90855362 | MS.gene80973:CDS | 35.0% | |
| AAGATTAAGAACACATTGGC+TGG | - | chr7.3:90854955-90854974 | None:intergenic | 35.0% | |
| AATGACAAACAAGACAGAAC+TGG | - | chr7.3:90854296-90854315 | None:intergenic | 35.0% | |
| ACAAGAAAATGTGCTTGAAG+AGG | + | chr7.3:90853337-90853356 | MS.gene80973:CDS | 35.0% | |
| ACCAATTGATCAAAGATAGG+CGG | - | chr7.3:90853887-90853906 | None:intergenic | 35.0% | |
| AGAGCAATTAACACAACAGA+TGG | + | chr7.3:90855504-90855523 | MS.gene80973:CDS | 35.0% | |
| AGCATCAGACCATACAATTA+AGG | - | chr7.3:90854625-90854644 | None:intergenic | 35.0% | |
| ATTCTTTGACCTTCAACACT+TGG | + | chr7.3:90855302-90855321 | MS.gene80973:CDS | 35.0% | |
| CAAGAAAATGTGCTTGAAGA+GGG | + | chr7.3:90853338-90853357 | MS.gene80973:CDS | 35.0% | |
| GGCAAGTTGTAATTGCTTAT+AGG | - | chr7.3:90855021-90855040 | None:intergenic | 35.0% | |
| TAGATGCAGTAGAAATGACA+GGG | - | chr7.3:90852941-90852960 | None:intergenic | 35.0% | |
| TATGGTGGTAAATGAAAGCT+CGG | - | chr7.3:90853149-90853168 | None:intergenic | 35.0% | |
| TCAACATTGGGACTTAAAAG+CGG | - | chr7.3:90855640-90855659 | None:intergenic | 35.0% | |
| TCGTGAAGCTCGTTAATAAA+CGG | - | chr7.3:90854150-90854169 | None:intergenic | 35.0% | |
| TTAATTGCTCTTGCGTCAAA+CGG | - | chr7.3:90855495-90855514 | None:intergenic | 35.0% | |
| TTGCAATCACATAACAGGTT+TGG | - | chr7.3:90855042-90855061 | None:intergenic | 35.0% | |
| TTGCTCTTTCCATTAGGTTT+CGG | - | chr7.3:90852849-90852868 | None:intergenic | 35.0% | |
| TTTCTTGTGACAAATAGGCT+AGG | + | chr7.3:90854109-90854128 | MS.gene80973:intron | 35.0% | |
| ! | AAGATTTGCTTAACCGTCAA+AGG | + | chr7.3:90855548-90855567 | MS.gene80973:CDS | 35.0% |
| ! | ATGATAATGAAAAAGAGCGC+TGG | + | chr7.3:90853615-90853634 | MS.gene80973:CDS | 35.0% |
| ! | CTTCAAGCACATTTTCTTGT+TGG | - | chr7.3:90853337-90853356 | None:intergenic | 35.0% |
| ! | GTAGGAATAGCTAAGAGTAT+TGG | + | chr7.3:90854561-90854580 | MS.gene80973:intron | 35.0% |
| ! | TCAAGCACATTTTCTTGTTG+GGG | - | chr7.3:90853335-90853354 | None:intergenic | 35.0% |
| !! | AGAGTATTGGCTCCAAAAAT+TGG | + | chr7.3:90854574-90854593 | MS.gene80973:intron | 35.0% |
| !! | ATGATTGAGGGTTAGTCTTA+GGG | - | chr7.3:90855416-90855435 | None:intergenic | 35.0% |
| !! | ATTTGTTGTTGGGAAAAAGG+TGG | - | chr7.3:90853233-90853252 | None:intergenic | 35.0% |
| !! | CATCACTTTTGGAAGACATA+TGG | + | chr7.3:90853584-90853603 | MS.gene80973:CDS | 35.0% |
| !! | GAGTATTGGCTCCAAAAATT+GGG | + | chr7.3:90854575-90854594 | MS.gene80973:intron | 35.0% |
| !! | TTTGTTGTTGGGAAAAAGGT+GGG | - | chr7.3:90853232-90853251 | None:intergenic | 35.0% |
| !!! | GCACTATTTTTGTTGCAGTT+TGG | + | chr7.3:90854268-90854287 | MS.gene80973:intron | 35.0% |
| !!! | TGGTGGATTTTGTTGTTGTT+GGG | - | chr7.3:90853282-90853301 | None:intergenic | 35.0% |
| AATATCCAGGATGTACTGGA+GGG | - | chr7.3:90853091-90853110 | None:intergenic | 40.0% | |
| AATGCAGACCAAGTGTTCTT+GGG | + | chr7.3:90853736-90853755 | MS.gene80973:intron | 40.0% | |
| ACAAGAGTAGGAATTGTGCT+GGG | - | chr7.3:90855773-90855792 | None:intergenic | 40.0% | |
| ACAATTAAGGCAGTAGGTTC+TGG | - | chr7.3:90854612-90854631 | None:intergenic | 40.0% | |
| AGACCCATTAGAAATAGCCT+CGG | - | chr7.3:90855272-90855291 | None:intergenic | 40.0% | |
| ATAGTGCACAGACCACAATT+CGG | - | chr7.3:90854337-90854356 | None:intergenic | 40.0% | |
| ATTTAAGGACAGAACTGGCA+AGG | - | chr7.3:90855206-90855225 | None:intergenic | 40.0% | |
| CAATTAAGGCAGTAGGTTCT+GGG | - | chr7.3:90854611-90854630 | None:intergenic | 40.0% | |
| CCAATTGATCAAAGATAGGC+GGG | - | chr7.3:90853886-90853905 | None:intergenic | 40.0% | |
| CCAGTACATCCTGGATATTA+TGG | + | chr7.3:90853092-90853111 | MS.gene80973:CDS | 40.0% | |
| CCATAATATCCAGGATGTAC+TGG | - | chr7.3:90853095-90853114 | None:intergenic | 40.0% | |
| CTAAGACTAACCCTCAATCA+TGG | + | chr7.3:90855415-90855434 | MS.gene80973:CDS | 40.0% | |
| GAAACCTAATGGAAAGAGCA+AGG | + | chr7.3:90852848-90852867 | MS.gene80973:CDS | 40.0% | |
| GACCATACAATTAAGGCAGT+AGG | - | chr7.3:90854618-90854637 | None:intergenic | 40.0% | |
| GTAGATGCAGTAGAAATGAC+AGG | - | chr7.3:90852942-90852961 | None:intergenic | 40.0% | |
| TAACCCTCAATCATGGTGAA+GGG | + | chr7.3:90855422-90855441 | MS.gene80973:CDS | 40.0% | |
| TAACCGTCAAAGGTCATATG+AGG | + | chr7.3:90855558-90855577 | MS.gene80973:CDS | 40.0% | |
| TAATATCCAGGATGTACTGG+AGG | - | chr7.3:90853092-90853111 | None:intergenic | 40.0% | |
| TAATGCAGACCAAGTGTTCT+TGG | + | chr7.3:90853735-90853754 | MS.gene80973:intron | 40.0% | |
| TGAACTTACGAGTTTCCACT+AGG | - | chr7.3:90853440-90853459 | None:intergenic | 40.0% | |
| ! | ATTGGCTCCAAAAATTGGGT+GGG | + | chr7.3:90854579-90854598 | MS.gene80973:intron | 40.0% |
| ! | CAGATTTTTGCCTTGCAAAC+CGG | + | chr7.3:90853523-90853542 | MS.gene80973:intron | 40.0% |
| ! | CTTGTCGTATCTCTCACTTT+TGG | + | chr7.3:90854233-90854252 | MS.gene80973:intron | 40.0% |
| ! | GACATTTCCCACCCAATTTT+TGG | - | chr7.3:90854589-90854608 | None:intergenic | 40.0% |
| ! | GTAAGGAGAGTGCAGTTAAA+CGG | - | chr7.3:90855164-90855183 | None:intergenic | 40.0% |
| ! | TGTGGTAAGCTTTAGCTCAA+GGG | + | chr7.3:90854388-90854407 | MS.gene80973:intron | 40.0% |
| ! | TTGGAAGACATATGGTGATG+TGG | + | chr7.3:90853592-90853611 | MS.gene80973:CDS | 40.0% |
| !! | ATGAAAAAGAGCGCTGGTTT+AGG | + | chr7.3:90853621-90853640 | MS.gene80973:CDS | 40.0% |
| !! | ATTTGTTGTTGTTGGGGAAG+GGG | - | chr7.3:90853194-90853213 | None:intergenic | 40.0% |
| !! | CATGATTGAGGGTTAGTCTT+AGG | - | chr7.3:90855417-90855436 | None:intergenic | 40.0% |
| !! | CGGATTTGTTGTTGGGAAAA+AGG | - | chr7.3:90853236-90853255 | None:intergenic | 40.0% |
| !! | GATTTGTTGTTGTTGGGGAA+GGG | - | chr7.3:90853195-90853214 | None:intergenic | 40.0% |
| !! | TATTGGCTCCAAAAATTGGG+TGG | + | chr7.3:90854578-90854597 | MS.gene80973:intron | 40.0% |
| !! | TGGAGGGATTTGTTGTTGTT+GGG | - | chr7.3:90853201-90853220 | None:intergenic | 40.0% |
| !! | TTGCCGAGGCTATTTCTAAT+GGG | + | chr7.3:90855266-90855285 | MS.gene80973:CDS | 40.0% |
| !! | TTGTGGACGGATTTGTTGTT+GGG | - | chr7.3:90853243-90853262 | None:intergenic | 40.0% |
| !! | TTTTGTGGTGGGACTGAATA+TGG | - | chr7.3:90853167-90853186 | None:intergenic | 40.0% |
| !!! | CGATTCATTTTAAGGCCTAG+TGG | + | chr7.3:90853422-90853441 | MS.gene80973:CDS | 40.0% |
| !!! | CTCGTCGTCGATTCATTTTA+AGG | + | chr7.3:90853414-90853433 | MS.gene80973:CDS | 40.0% |
| !!! | GAAAAAGGTGGGTTTTGTTG+TGG | - | chr7.3:90853221-90853240 | None:intergenic | 40.0% |
| !!! | GGTGGATTTTGTTGTTGTTG+GGG | - | chr7.3:90853281-90853300 | None:intergenic | 40.0% |
| !!! | GTGGTGGATTTTGTTGTTGT+TGG | - | chr7.3:90853283-90853302 | None:intergenic | 40.0% |
| !!! | TGGTGGGTTTTGTTGTTGTT+GGG | - | chr7.3:90853309-90853328 | None:intergenic | 40.0% |
| !!! | TTTTGTTGTTGTTGGGGAAC+AGG | - | chr7.3:90853275-90853294 | None:intergenic | 40.0% |
| !!! | TTTTGTTGTTGTTGGGGTTG+TGG | - | chr7.3:90853302-90853321 | None:intergenic | 40.0% |
| AAGGGAAAGCTATACGGTCT+TGG | + | chr7.3:90855349-90855368 | MS.gene80973:CDS | 45.0% | |
| AATAGGCTAGGAGGTTACGT+CGG | + | chr7.3:90854121-90854140 | MS.gene80973:intron | 45.0% | |
| AATCGACGACGAGAATCTCT+CGG | - | chr7.3:90853407-90853426 | None:intergenic | 45.0% | |
| ACAACAGATGGCAAGTCAAG+CGG | + | chr7.3:90855516-90855535 | MS.gene80973:CDS | 45.0% | |
| ACCGGATAAGGGTCAACATT+GGG | - | chr7.3:90855652-90855671 | None:intergenic | 45.0% | |
| ACTGGTGGTTGCTTAAGCAA+CGG | + | chr7.3:90853992-90854011 | MS.gene80973:CDS | 45.0% | |
| AGTTGCTGGAGACAAGAAGA+AGG | + | chr7.3:90855330-90855349 | MS.gene80973:CDS | 45.0% | |
| ATGGCACCATACCTCCTTAT+GGG | + | chr7.3:90853111-90853130 | MS.gene80973:CDS | 45.0% | |
| CACAAGAGTAGGAATTGTGC+TGG | - | chr7.3:90855774-90855793 | None:intergenic | 45.0% | |
| CAGTAGAAATGACAGGGATC+GGG | - | chr7.3:90852935-90852954 | None:intergenic | 45.0% | |
| CCCGCCTATCTTTGATCAAT+TGG | + | chr7.3:90853883-90853902 | MS.gene80973:CDS | 45.0% | |
| CCGACAAAGCAAAGAAGAAC+CGG | + | chr7.3:90853942-90853961 | MS.gene80973:CDS | 45.0% | |
| CCGGTTCTTCTTTGCTTTGT+CGG | - | chr7.3:90853945-90853964 | None:intergenic | 45.0% | |
| CGACAAAGCAAAGAAGAACC+GGG | + | chr7.3:90853943-90853962 | MS.gene80973:CDS | 45.0% | |
| CGAGAATCTCTCGGATAATC+CGG | - | chr7.3:90853398-90853417 | None:intergenic | 45.0% | |
| CTAACCCTCAATCATGGTGA+AGG | + | chr7.3:90855421-90855440 | MS.gene80973:CDS | 45.0% | |
| CTCTTTCCATTAGGTTTCGG+AGG | - | chr7.3:90852846-90852865 | None:intergenic | 45.0% | |
| CTTGTGACAAATAGGCTAGG+AGG | + | chr7.3:90854112-90854131 | MS.gene80973:intron | 45.0% | |
| GAAAATGTGCTTGAAGAGGG+TGG | + | chr7.3:90853341-90853360 | MS.gene80973:CDS | 45.0% | |
| GAGAATCTCTCGGATAATCC+GGG | - | chr7.3:90853397-90853416 | None:intergenic | 45.0% | |
| GCAGTAGAAATGACAGGGAT+CGG | - | chr7.3:90852936-90852955 | None:intergenic | 45.0% | |
| GCGGTATAATACGCACTTAG+TGG | + | chr7.3:90852884-90852903 | MS.gene80973:CDS | 45.0% | |
| GCTCCTCATATGACCTTTGA+CGG | - | chr7.3:90855564-90855583 | None:intergenic | 45.0% | |
| GGTATGAGGAGACAAGAAAG+CGG | + | chr7.3:90853846-90853865 | MS.gene80973:CDS | 45.0% | |
| GTAAATGAAAGCTCGGAGGA+AGG | - | chr7.3:90853142-90853161 | None:intergenic | 45.0% | |
| GTAACTTGGCTGCTAACTAC+CGG | + | chr7.3:90855371-90855390 | MS.gene80973:CDS | 45.0% | |
| GTTGCTGGAGACAAGAAGAA+GGG | + | chr7.3:90855331-90855350 | MS.gene80973:CDS | 45.0% | |
| TACCGGATAAGGGTCAACAT+TGG | - | chr7.3:90855653-90855672 | None:intergenic | 45.0% | |
| TACTTAGAAGAGCCCGTATG+CGG | + | chr7.3:90853825-90853844 | MS.gene80973:CDS | 45.0% | |
| TATGGCACCATACCTCCTTA+TGG | + | chr7.3:90853110-90853129 | MS.gene80973:CDS | 45.0% | |
| TCATCATCCTCCTCATCTAC+CGG | - | chr7.3:90855670-90855689 | None:intergenic | 45.0% | |
| TCCCAATGTTGACCCTTATC+CGG | + | chr7.3:90855648-90855667 | MS.gene80973:CDS | 45.0% | |
| TTGATGCAACACTACCCTTC+CGG | - | chr7.3:90855393-90855412 | None:intergenic | 45.0% | |
| TTGCCCTTGCTCTTTCCATT+AGG | - | chr7.3:90852855-90852874 | None:intergenic | 45.0% | |
| TTGTCTCCTCATACCGCATA+CGG | - | chr7.3:90853841-90853860 | None:intergenic | 45.0% | |
| ! | ACATTTTCTTGTTGGGGCTG+TGG | - | chr7.3:90853329-90853348 | None:intergenic | 45.0% |
| ! | GCTATACGGTCTTGGTAACT+TGG | + | chr7.3:90855357-90855376 | MS.gene80973:CDS | 45.0% |
| ! | GGATGATGAGGATGATGATG+AGG | + | chr7.3:90855681-90855700 | MS.gene80973:intron | 45.0% |
| ! | GTGTGGTAAGCTTTAGCTCA+AGG | + | chr7.3:90854387-90854406 | MS.gene80973:intron | 45.0% |
| ! | TTGAACAGGAGGAGTATGAC+CGG | + | chr7.3:90855239-90855258 | MS.gene80973:intron | 45.0% |
| !! | CTTGCCGAGGCTATTTCTAA+TGG | + | chr7.3:90855265-90855284 | MS.gene80973:CDS | 45.0% |
| !! | GGAGGGATTTGTTGTTGTTG+GGG | - | chr7.3:90853200-90853219 | None:intergenic | 45.0% |
| !! | GGATTTGTTGTTGTTGGGGA+AGG | - | chr7.3:90853196-90853215 | None:intergenic | 45.0% |
| !! | GGTATGGTGCCATAATATCC+AGG | - | chr7.3:90853104-90853123 | None:intergenic | 45.0% |
| !! | GTGGAGGGATTTGTTGTTGT+TGG | - | chr7.3:90853202-90853221 | None:intergenic | 45.0% |
| !! | GTTGCAGCTCATAGTCTTGT+AGG | + | chr7.3:90854543-90854562 | MS.gene80973:intron | 45.0% |
| !! | GTTGTGGACGGATTTGTTGT+TGG | - | chr7.3:90853244-90853263 | None:intergenic | 45.0% |
| !!! | AAAGGTGGGTTTTGTTGTGG+AGG | - | chr7.3:90853218-90853237 | None:intergenic | 45.0% |
| !!! | AAGGTGGGTTTTGTTGTGGA+GGG | - | chr7.3:90853217-90853236 | None:intergenic | 45.0% |
| !!! | GGTGGGTTTTGTTGTTGTTG+GGG | - | chr7.3:90853308-90853327 | None:intergenic | 45.0% |
| !!! | GTGGTGGGTTTTGTTGTTGT+TGG | - | chr7.3:90853310-90853329 | None:intergenic | 45.0% |
| AAGGGAGGATGCATTCACAC+TGG | + | chr7.3:90853974-90853993 | MS.gene80973:CDS | 50.0% | |
| AAGGTCATATGAGGAGCAGC+TGG | + | chr7.3:90855567-90855586 | MS.gene80973:CDS | 50.0% | |
| AATGTGCTTGAAGAGGGTGG+TGG | + | chr7.3:90853344-90853363 | MS.gene80973:CDS | 50.0% | |
| AGGACCCTTCACCATGATTG+AGG | - | chr7.3:90855429-90855448 | None:intergenic | 50.0% | |
| ATAGGCTAGGAGGTTACGTC+GGG | + | chr7.3:90854122-90854141 | MS.gene80973:intron | 50.0% | |
| ATCTGCTGCATCTTCTAGCC+AGG | + | chr7.3:90852974-90852993 | MS.gene80973:CDS | 50.0% | |
| ATGAAAGCTCGGAGGAAGGA+AGG | - | chr7.3:90853138-90853157 | None:intergenic | 50.0% | |
| CACACCTTCCCAAGAACACT+TGG | - | chr7.3:90853747-90853766 | None:intergenic | 50.0% | |
| CAGACCAAGTGTTCTTGGGA+AGG | + | chr7.3:90853740-90853759 | MS.gene80973:intron | 50.0% | |
| CCTCCTCATCTACCGGATAA+GGG | - | chr7.3:90855663-90855682 | None:intergenic | 50.0% | |
| GAAGGTCCCATAAGGAGGTA+TGG | - | chr7.3:90853120-90853139 | None:intergenic | 50.0% | |
| GATCTGATTGCTTCAGCAGC+CGG | - | chr7.3:90853545-90853564 | None:intergenic | 50.0% | |
| GGACCCTTCACCATGATTGA+GGG | - | chr7.3:90855428-90855447 | None:intergenic | 50.0% | |
| GGTAGATGAGGAGGATGATG+AGG | + | chr7.3:90855669-90855688 | MS.gene80973:intron | 50.0% | |
| GGTGGTAAATGAAAGCTCGG+AGG | - | chr7.3:90853146-90853165 | None:intergenic | 50.0% | |
| TAAAAGCGGCGCACTAGTGT+GGG | - | chr7.3:90855626-90855645 | None:intergenic | 50.0% | |
| TCCTCCTCATCTACCGGATA+AGG | - | chr7.3:90855664-90855683 | None:intergenic | 50.0% | |
| TCTGCTGCATCTTCTAGCCA+GGG | + | chr7.3:90852975-90852994 | MS.gene80973:CDS | 50.0% | |
| TGAATAAGCTCCCGCATCTC+TGG | - | chr7.3:90855472-90855491 | None:intergenic | 50.0% | |
| TGACCCTTATCCGGTAGATG+AGG | + | chr7.3:90855657-90855676 | MS.gene80973:intron | 50.0% | |
| TGTCTCCTCATACCGCATAC+GGG | - | chr7.3:90853840-90853859 | None:intergenic | 50.0% | |
| TTAAAAGCGGCGCACTAGTG+TGG | - | chr7.3:90855627-90855646 | None:intergenic | 50.0% | |
| TTGGCTGCTAACTACCGGAA+GGG | + | chr7.3:90855376-90855395 | MS.gene80973:CDS | 50.0% | |
| TTTCTTGTTGGGGCTGTGGT+GGG | - | chr7.3:90853325-90853344 | None:intergenic | 50.0% | |
| ! | ACTGGAGGGCACATGTAAGT+GGG | - | chr7.3:90853077-90853096 | None:intergenic | 50.0% |
| ! | GTTGTTGTTGGGGAACAGGT+GGG | - | chr7.3:90853271-90853290 | None:intergenic | 50.0% |
| ! | TACTGGAGGGCACATGTAAG+TGG | - | chr7.3:90853078-90853097 | None:intergenic | 50.0% |
| ! | TGTGGTGGGACTGAATATGG+TGG | - | chr7.3:90853164-90853183 | None:intergenic | 50.0% |
| ! | TGTTGTTGTTGGGGAACAGG+TGG | - | chr7.3:90853272-90853291 | None:intergenic | 50.0% |
| ! | TGTTGTTGTTGGGGTTGTGG+TGG | - | chr7.3:90853299-90853318 | None:intergenic | 50.0% |
| ! | TTTTCTTGTTGGGGCTGTGG+TGG | - | chr7.3:90853326-90853345 | None:intergenic | 50.0% |
| !! | GAAGGGGAAGGTTTTGTGGT+GGG | - | chr7.3:90853178-90853197 | None:intergenic | 50.0% |
| !! | GGTTAAGTATTGGGCGTCTG+AGG | + | chr7.3:90853904-90853923 | MS.gene80973:CDS | 50.0% |
| !!! | CAGGTGGGTTTTGTTGTGGA+CGG | - | chr7.3:90853256-90853275 | None:intergenic | 50.0% |
| !!! | GGAACAGGTGGGTTTTGTTG+TGG | - | chr7.3:90853260-90853279 | None:intergenic | 50.0% |
| AAATAGCCTCGGCAAGCTGC+CGG | - | chr7.3:90855261-90855280 | None:intergenic | 55.0% | |
| AAGAGCCCGTATGCGGTATG+AGG | + | chr7.3:90853832-90853851 | MS.gene80973:CDS | 55.0% | |
| AATACTGCGACGAGCGTGCT+AGG | + | chr7.3:90854196-90854215 | MS.gene80973:CDS | 55.0% | |
| AGAAAGCGGCCGCATTGGAT+TGG | + | chr7.3:90853860-90853879 | MS.gene80973:CDS | 55.0% | |
| AGACAAGAAAGCGGCCGCAT+TGG | + | chr7.3:90853855-90853874 | MS.gene80973:CDS | 55.0% | |
| AGCAAAGAAGAACCGGGCGT+CGG | + | chr7.3:90853949-90853968 | MS.gene80973:CDS | 55.0% | |
| ATAGGCGGGCCAATCCAATG+CGG | - | chr7.3:90853872-90853891 | None:intergenic | 55.0% | |
| ATGTGCCCTCCAGTACATCC+TGG | + | chr7.3:90853083-90853102 | MS.gene80973:CDS | 55.0% | |
| CCCTTATCCGGTAGATGAGG+AGG | + | chr7.3:90855660-90855679 | MS.gene80973:intron | 55.0% | |
| CTCCATGCTCAGATCAGACG+CGG | - | chr7.3:90854725-90854744 | None:intergenic | 55.0% | |
| CTTCTAGCCAGGGATCACCT+GGG | + | chr7.3:90852985-90853004 | MS.gene80973:CDS | 55.0% | |
| CTTGGCTGCTAACTACCGGA+AGG | + | chr7.3:90855375-90855394 | MS.gene80973:CDS | 55.0% | |
| GAAAGAGCAAGGGCAACAGC+AGG | + | chr7.3:90852859-90852878 | MS.gene80973:CDS | 55.0% | |
| GGAAGGAAGGTCCCATAAGG+AGG | - | chr7.3:90853125-90853144 | None:intergenic | 55.0% | |
| GGAGGAAGGAAGGTCCCATA+AGG | - | chr7.3:90853128-90853147 | None:intergenic | 55.0% | |
| GGAGGATGCATTCACACTGG+TGG | + | chr7.3:90853977-90853996 | MS.gene80973:CDS | 55.0% | |
| GGGCACATGTAAGTGGGATG+AGG | - | chr7.3:90853071-90853090 | None:intergenic | 55.0% | |
| TAGCACGCTCGTCGCAGTAT+TGG | - | chr7.3:90854197-90854216 | None:intergenic | 55.0% | |
| TAGTGTAGCTGCTCCTGCGA+CGG | + | chr7.3:90853019-90853038 | MS.gene80973:CDS | 55.0% | |
| TCTTCTAGCCAGGGATCACC+TGG | + | chr7.3:90852984-90853003 | MS.gene80973:CDS | 55.0% | |
| TTTAGGCAAGCCCAGGCTCA+AGG | + | chr7.3:90855595-90855614 | MS.gene80973:CDS | 55.0% | |
| ! | AGGAGCAGCTACACTAGCCT+GGG | - | chr7.3:90853015-90853034 | None:intergenic | 55.0% |
| ! | AGGAGCAGCTGGCTCAGTTT+AGG | + | chr7.3:90855578-90855597 | MS.gene80973:CDS | 55.0% |
| ! | GTTGTTGTTGGGGAAGGGGA+AGG | - | chr7.3:90853190-90853209 | None:intergenic | 55.0% |
| ! | TGGGGAAGGGGAAGGTTTTG+TGG | - | chr7.3:90853182-90853201 | None:intergenic | 55.0% |
| !! | AAGAACCGGGCGTCGGAAAA+GGG | + | chr7.3:90853956-90853975 | MS.gene80973:CDS | 55.0% |
| !! | GCGCTGGTTTAGGCTCTTTC+AGG | + | chr7.3:90853631-90853650 | MS.gene80973:CDS | 55.0% |
| !! | GGAAGGGGAAGGTTTTGTGG+TGG | - | chr7.3:90853179-90853198 | None:intergenic | 55.0% |
| AGCCGCGTCTGATCTGAGCA+TGG | + | chr7.3:90854720-90854739 | MS.gene80973:intron | 60.0% | |
| CAGGAGCAGCTACACTAGCC+TGG | - | chr7.3:90853016-90853035 | None:intergenic | 60.0% | |
| CGCGTCTGATCTGAGCATGG+AGG | + | chr7.3:90854723-90854742 | MS.gene80973:intron | 60.0% | |
| CTGAGCTGACGCCAGAGATG+CGG | + | chr7.3:90855458-90855477 | MS.gene80973:CDS | 60.0% | |
| GCAAGGGCAACAGCAGGAAG+CGG | + | chr7.3:90852865-90852884 | MS.gene80973:CDS | 60.0% | |
| GGCTCAGTTTAGGCAAGCCC+AGG | + | chr7.3:90855588-90855607 | MS.gene80973:CDS | 60.0% | |
| TGAGCTGACGCCAGAGATGC+GGG | + | chr7.3:90855459-90855478 | MS.gene80973:CDS | 60.0% | |
| ! | AGCAGCTACACTAGCCTGGG+AGG | - | chr7.3:90853012-90853031 | None:intergenic | 60.0% |
| ! | ATCCTCCCTTTTCCGACGCC+CGG | - | chr7.3:90853964-90853983 | None:intergenic | 60.0% |
| ! | CTTAGTGGACGCAGCGACAG+AGG | + | chr7.3:90852899-90852918 | MS.gene80973:CDS | 60.0% |
| ! | TTGGGCGTCTGAGGCGTTCA+AGG | + | chr7.3:90853913-90853932 | MS.gene80973:CDS | 60.0% |
| !! | ACGCTCGTCGCAGTATTGGC+CGG | - | chr7.3:90854193-90854212 | None:intergenic | 60.0% |
| !! | GAAGAACCGGGCGTCGGAAA+AGG | + | chr7.3:90853955-90853974 | MS.gene80973:CDS | 60.0% |
| !! | GCTTCAGCAGCCGGTTTGCA+AGG | - | chr7.3:90853536-90853555 | None:intergenic | 60.0% |
| !! | TGAAGAGGGTGGTGGAGAGC+TGG | + | chr7.3:90853352-90853371 | MS.gene80973:CDS | 60.0% |
| AAGCGGCGCACTAGTGTGGG+AGG | - | chr7.3:90855623-90855642 | None:intergenic | 65.0% | |
| AGCGGCGCACTAGTGTGGGA+GGG | - | chr7.3:90855622-90855641 | None:intergenic | 65.0% | |
| CGCATCTCTGGCGTCAGCTC+AGG | - | chr7.3:90855460-90855479 | None:intergenic | 65.0% | |
| GACGGCTTCTGCTCCTGCGA+CGG | + | chr7.3:90853037-90853056 | MS.gene80973:CDS | 65.0% | |
| GTATGACCGGCAGCTTGCCG+AGG | + | chr7.3:90855252-90855271 | MS.gene80973:CDS | 65.0% | |
| GTGGGAGGGACCTTGAGCCT+GGG | - | chr7.3:90855608-90855627 | None:intergenic | 65.0% | |
| TGAGGAGCAGAAGCCGTCGC+AGG | - | chr7.3:90853053-90853072 | None:intergenic | 65.0% | |
| TGGCGTCAGCTCAGGCTGCT+GGG | - | chr7.3:90855452-90855471 | None:intergenic | 65.0% | |
| TGTGGGAGGGACCTTGAGCC+TGG | - | chr7.3:90855609-90855628 | None:intergenic | 65.0% | |
| ! | ACACTAGCCTGGGAGGACCC+AGG | - | chr7.3:90853005-90853024 | None:intergenic | 65.0% |
| ! | CGAGCGTGCTAGGAGTGTGC+AGG | + | chr7.3:90854206-90854225 | MS.gene80973:CDS | 65.0% |
| ! | CGGAGAGCACGCTGAGCGTA+TGG | + | chr7.3:90854012-90854031 | MS.gene80973:CDS | 65.0% |
| !! | AACCGGGCGTCGGAAAAGGG+AGG | + | chr7.3:90853959-90853978 | MS.gene80973:CDS | 65.0% |
| CGTCAGCTCAGGCTGCTGGG+AGG | - | chr7.3:90855449-90855468 | None:intergenic | 70.0% | |
| CTGGCGTCAGCTCAGGCTGC+TGG | - | chr7.3:90855453-90855472 | None:intergenic | 70.0% | |
| GCAGGAGCAGAAGCCGTCGC+AGG | - | chr7.3:90853035-90853054 | None:intergenic | 70.0% | |
| GGGAGGACCCAGGTGATCCC+TGG | - | chr7.3:90852995-90853014 | None:intergenic | 70.0% | |
| GGGATCACCTGGGTCCTCCC+AGG | + | chr7.3:90852995-90853014 | MS.gene80973:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 90852840 | 90855810 | 90852840 | ID=MS.gene80973 |
| chr7.3 | mRNA | 90852840 | 90855810 | 90852840 | ID=MS.gene80973.t1;Parent=MS.gene80973 |
| chr7.3 | exon | 90852840 | 90853450 | 90852840 | ID=MS.gene80973.t1.exon1;Parent=MS.gene80973.t1 |
| chr7.3 | CDS | 90852840 | 90853450 | 90852840 | ID=cds.MS.gene80973.t1;Parent=MS.gene80973.t1 |
| chr7.3 | exon | 90853526 | 90853652 | 90853526 | ID=MS.gene80973.t1.exon2;Parent=MS.gene80973.t1 |
| chr7.3 | CDS | 90853526 | 90853652 | 90853526 | ID=cds.MS.gene80973.t1;Parent=MS.gene80973.t1 |
| chr7.3 | exon | 90853743 | 90854033 | 90853743 | ID=MS.gene80973.t1.exon3;Parent=MS.gene80973.t1 |
| chr7.3 | CDS | 90853743 | 90854033 | 90853743 | ID=cds.MS.gene80973.t1;Parent=MS.gene80973.t1 |
| chr7.3 | exon | 90854126 | 90854227 | 90854126 | ID=MS.gene80973.t1.exon4;Parent=MS.gene80973.t1 |
| chr7.3 | CDS | 90854126 | 90854227 | 90854126 | ID=cds.MS.gene80973.t1;Parent=MS.gene80973.t1 |
| chr7.3 | exon | 90855247 | 90855669 | 90855247 | ID=MS.gene80973.t1.exon5;Parent=MS.gene80973.t1 |
| chr7.3 | CDS | 90855247 | 90855669 | 90855247 | ID=cds.MS.gene80973.t1;Parent=MS.gene80973.t1 |
| chr7.3 | exon | 90855775 | 90855810 | 90855775 | ID=MS.gene80973.t1.exon6;Parent=MS.gene80973.t1 |
| chr7.3 | CDS | 90855775 | 90855810 | 90855775 | ID=cds.MS.gene80973.t1;Parent=MS.gene80973.t1 |
| Gene Sequence |
| Protein sequence |
