Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81318.t1 | AET00784.2 | 85.8 | 747 | 57 | 6 | 1 | 731 | 1 | 714 | 0.00E+00 | 1180.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81318.t1 | Q9SJQ6 | 38.0 | 874 | 353 | 15 | 22 | 722 | 522 | 1379 | 8.4e-142 | 505.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81318.t1 | G7KEG3 | 85.8 | 747 | 57 | 6 | 1 | 731 | 1 | 714 | 0.0e+00 | 1180.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051941 | MS.gene81318 | 0.853038 | 3.11E-61 | -1.69E-46 |
| MS.gene055741 | MS.gene81318 | 0.800181 | 1.63E-48 | -1.69E-46 |
| MS.gene055909 | MS.gene81318 | 0.803127 | 4.04E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene81318 | 0.821785 | 3.36E-53 | -1.69E-46 |
| MS.gene057019 | MS.gene81318 | 0.822565 | 2.21E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene81318 | 0.837822 | 4.14E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81318.t1 | MTR_5g095880 | 87.049 | 749 | 44 | 9 | 1 | 731 | 1 | 714 | 0.0 | 1268 |
| MS.gene81318.t1 | MTR_2g008920 | 78.230 | 418 | 81 | 3 | 1 | 417 | 280 | 688 | 0.0 | 665 |
| MS.gene81318.t1 | MTR_1g061220 | 46.558 | 552 | 247 | 10 | 211 | 722 | 1606 | 2149 | 5.78e-152 | 490 |
| MS.gene81318.t1 | MTR_1g061220 | 60.748 | 107 | 37 | 2 | 22 | 125 | 1162 | 1266 | 1.48e-19 | 94.7 |
| MS.gene81318.t1 | MTR_2g008930 | 76.892 | 251 | 57 | 1 | 437 | 687 | 1 | 250 | 5.34e-136 | 401 |
| MS.gene81318.t1 | MTR_7g103680 | 40.760 | 579 | 242 | 11 | 216 | 722 | 1180 | 1729 | 1.39e-123 | 406 |
| MS.gene81318.t1 | MTR_7g103680 | 46.835 | 158 | 64 | 6 | 2 | 141 | 673 | 828 | 7.42e-23 | 105 |
| MS.gene81318.t1 | MTR_2g075880 | 30.769 | 299 | 90 | 5 | 72 | 370 | 242 | 423 | 9.63e-32 | 129 |
| MS.gene81318.t1 | MTR_2g075880 | 33.728 | 169 | 80 | 8 | 298 | 451 | 82 | 233 | 1.28e-15 | 80.5 |
| MS.gene81318.t1 | MTR_2g084845 | 60.606 | 99 | 39 | 0 | 85 | 183 | 2 | 100 | 2.19e-28 | 110 |
| MS.gene81318.t1 | MTR_1g492760 | 46.610 | 118 | 59 | 2 | 211 | 324 | 1239 | 1356 | 1.14e-26 | 117 |
| MS.gene81318.t1 | MTR_1g492760 | 50.000 | 140 | 57 | 4 | 12 | 140 | 734 | 871 | 3.46e-26 | 115 |
| MS.gene81318.t1 | MTR_4g106380 | 31.707 | 123 | 84 | 0 | 239 | 361 | 115 | 237 | 1.86e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81318.t1 | AT2G36490 | 44.618 | 641 | 290 | 15 | 113 | 722 | 773 | 1379 | 8.64e-158 | 493 |
| MS.gene81318.t1 | AT2G36490 | 58.182 | 110 | 41 | 2 | 22 | 127 | 522 | 630 | 2.17e-23 | 107 |
| MS.gene81318.t1 | AT5G04560 | 47.080 | 548 | 239 | 10 | 211 | 722 | 1186 | 1718 | 8.06e-155 | 491 |
| MS.gene81318.t1 | AT5G04560 | 50.000 | 152 | 62 | 5 | 3 | 142 | 670 | 819 | 1.13e-27 | 120 |
| MS.gene81318.t1 | AT5G04560 | 47.080 | 548 | 239 | 10 | 211 | 722 | 1186 | 1718 | 8.06e-155 | 491 |
| MS.gene81318.t1 | AT5G04560 | 50.000 | 152 | 62 | 5 | 3 | 142 | 670 | 819 | 1.13e-27 | 120 |
| MS.gene81318.t1 | AT5G04560 | 47.080 | 548 | 239 | 10 | 211 | 722 | 1444 | 1976 | 2.47e-153 | 491 |
| MS.gene81318.t1 | AT5G04560 | 50.000 | 152 | 62 | 5 | 3 | 142 | 928 | 1077 | 1.24e-27 | 120 |
| MS.gene81318.t1 | AT4G34060 | 36.905 | 756 | 389 | 16 | 10 | 728 | 134 | 838 | 1.27e-139 | 431 |
| MS.gene81318.t1 | AT4G34060 | 37.067 | 750 | 384 | 16 | 10 | 722 | 271 | 969 | 1.64e-138 | 432 |
| MS.gene81318.t1 | AT4G34060 | 37.067 | 750 | 384 | 16 | 10 | 722 | 330 | 1028 | 5.15e-138 | 432 |
| MS.gene81318.t1 | AT4G34060 | 37.067 | 750 | 384 | 16 | 10 | 722 | 391 | 1089 | 2.87e-137 | 432 |
| MS.gene81318.t1 | AT3G10010 | 42.569 | 545 | 269 | 7 | 211 | 722 | 785 | 1318 | 7.42e-135 | 431 |
| MS.gene81318.t1 | AT3G10010 | 51.786 | 112 | 50 | 2 | 17 | 125 | 487 | 597 | 5.91e-14 | 76.6 |
| MS.gene81318.t1 | AT3G10010 | 42.569 | 545 | 269 | 7 | 211 | 722 | 785 | 1318 | 7.42e-135 | 431 |
| MS.gene81318.t1 | AT3G10010 | 51.786 | 112 | 50 | 2 | 17 | 125 | 487 | 597 | 5.91e-14 | 76.6 |
| MS.gene81318.t1 | AT4G34060 | 37.426 | 676 | 335 | 16 | 10 | 648 | 330 | 954 | 9.18e-123 | 390 |
| MS.gene81318.t1 | AT3G47830 | 31.707 | 123 | 84 | 0 | 239 | 361 | 128 | 250 | 2.57e-12 | 68.9 |
Find 114 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCGGACAAGCATTGCAATT+TGG | 0.190300 | 5.2:-80563124 | None:intergenic |
| TACACTTACTTTGCTTCATT+TGG | 0.238782 | 5.2:-80562330 | None:intergenic |
| CTCCAACAATTATCAGAGTA+TGG | 0.241689 | 5.2:-80563648 | None:intergenic |
| CAATTAATGTTCCTAGAAAA+TGG | 0.251519 | 5.2:+80565558 | MS.gene81318:CDS |
| AAGAAACAGATAGCATATTT+TGG | 0.258696 | 5.2:+80565593 | MS.gene81318:CDS |
| TCAAAATTCAACAATATCTT+TGG | 0.264764 | 5.2:+80562853 | MS.gene81318:CDS |
| TTATGTATTTGAATTGATTC+TGG | 0.265653 | 5.2:-80562712 | None:intergenic |
| CATAATTGCTTATAAAATTC+AGG | 0.270783 | 5.2:+80562152 | MS.gene81318:CDS |
| TCGGACAAGCATTGCAATTT+GGG | 0.288104 | 5.2:-80563123 | None:intergenic |
| CCCCTTATCTTCTGGTTGTA+TGG | 0.291113 | 5.2:+80564963 | MS.gene81318:CDS |
| GCGTGCACTGAAGGGATTTA+TGG | 0.307586 | 5.2:+80562263 | MS.gene81318:intron |
| GATTGATCTGTGGTTGGTTT+TGG | 0.308599 | 5.2:-80563582 | None:intergenic |
| AAGAAAACTCTACCATAAAA+TGG | 0.317142 | 5.2:+80561023 | MS.gene81318:CDS |
| CATTATCAGTTGATAACCTT+TGG | 0.322958 | 5.2:+80562999 | MS.gene81318:CDS |
| AAATGACTGTTTGTAGCATT+TGG | 0.331522 | 5.2:-80563939 | None:intergenic |
| ATGCATTGGCATGATCCATT+TGG | 0.338385 | 5.2:-80563617 | None:intergenic |
| AACAGTTCTTGGAACACTTC+TGG | 0.355090 | 5.2:+80565262 | MS.gene81318:CDS |
| TATACTTGAAAAGAAAATAT+TGG | 0.355229 | 5.2:+80561978 | MS.gene81318:CDS |
| TCCCATACTCTGATAATTGT+TGG | 0.366920 | 5.2:+80563646 | MS.gene81318:CDS |
| GATGCGGGCATCTCAATTAT+AGG | 0.369192 | 5.2:-80563717 | None:intergenic |
| ATGTTCCTAGAAAATGGATA+TGG | 0.370059 | 5.2:+80565564 | MS.gene81318:CDS |
| TAAATCACTTATAACTCATT+TGG | 0.376332 | 5.2:-80567011 | None:intergenic |
| CAATGATGTGCTTTCATGTT+CGG | 0.379965 | 5.2:-80563742 | None:intergenic |
| AGAATCTGAGTTCCTCTCTA+TGG | 0.380275 | 5.2:-80561896 | None:intergenic |
| TGATCCATCCCCTTATCTTC+TGG | 0.382226 | 5.2:+80564955 | MS.gene81318:CDS |
| AATTTCTTTGTCATCAACTT+TGG | 0.390007 | 5.2:-80561857 | None:intergenic |
| ACTTACTTTGCTTCATTTGG+TGG | 0.393936 | 5.2:-80562327 | None:intergenic |
| ACCATGGAAAGGCTCAGTTT+TGG | 0.397302 | 5.2:+80561555 | MS.gene81318:CDS |
| AGTCAGACTGAAACAGTTCT+TGG | 0.399032 | 5.2:+80565251 | MS.gene81318:CDS |
| ACGAAGAGACATTACGAGTA+TGG | 0.400107 | 5.2:+80560932 | MS.gene81318:CDS |
| CTTCTGGTTGTATGGCTGCC+AGG | 0.401721 | 5.2:+80564971 | MS.gene81318:CDS |
| TTTAACTTTACCTTGACAAA+TGG | 0.410634 | 5.2:-80561618 | None:intergenic |
| GGAAAAGAAAATGCAACATT+GGG | 0.412481 | 5.2:+80561999 | MS.gene81318:CDS |
| GATCAAGTGCATACTGTTCA+AGG | 0.418609 | 5.2:+80561060 | MS.gene81318:CDS |
| TGCATTGGCATGATCCATTT+GGG | 0.421828 | 5.2:-80563616 | None:intergenic |
| ATCATGCGAACTCTGTTGAT+TGG | 0.437720 | 5.2:+80562064 | MS.gene81318:CDS |
| TGACTACTGAAGTTAAATGT+TGG | 0.443967 | 5.2:-80563828 | None:intergenic |
| GATTCTGGTAATGGTTGTAA+AGG | 0.445716 | 5.2:-80562697 | None:intergenic |
| ATTTGAATTGATTCTGGTAA+TGG | 0.446941 | 5.2:-80562706 | None:intergenic |
| ATTCTGGTAATGGTTGTAAA+GGG | 0.447281 | 5.2:-80562696 | None:intergenic |
| TGAACATAAGAGGAGGTATT+GGG | 0.450907 | 5.2:+80560993 | MS.gene81318:CDS |
| ATGAACATAAGAGGAGGTAT+TGG | 0.451692 | 5.2:+80560992 | MS.gene81318:CDS |
| GCCATACAACCAGAAGATAA+GGG | 0.455483 | 5.2:-80564964 | None:intergenic |
| TCATCATGCCTGCCGATGTA+TGG | 0.460052 | 5.2:+80563855 | MS.gene81318:CDS |
| ATGTTCCATTCAAAGGAAAA+CGG | 0.464971 | 5.2:-80565397 | None:intergenic |
| AAAATAGATGATATAGGTCT+TGG | 0.465467 | 5.2:-80566947 | None:intergenic |
| ATCAATTGTAGCAACCCAAA+TGG | 0.468364 | 5.2:+80563602 | MS.gene81318:CDS |
| TGGAAAAGAAAATGCAACAT+TGG | 0.470264 | 5.2:+80561998 | MS.gene81318:CDS |
| ATTCTAAATTCATGCTTCCA+TGG | 0.470972 | 5.2:-80562290 | None:intergenic |
| TCATCGCTAACTAATTTGAC+AGG | 0.475212 | 5.2:-80561736 | None:intergenic |
| GGAACTCAGATTCTCGTAGT+AGG | 0.476062 | 5.2:+80561905 | MS.gene81318:CDS |
| TGAAAGTATGTTCCATTCAA+AGG | 0.479284 | 5.2:-80565404 | None:intergenic |
| TGTTCCATTCAAAGGAAAAC+GGG | 0.480045 | 5.2:-80565396 | None:intergenic |
| ATGGAAGCATGAATTTAGAA+TGG | 0.481227 | 5.2:+80562292 | MS.gene81318:CDS |
| CACTCTCATAAGTATAATCA+TGG | 0.482577 | 5.2:-80563785 | None:intergenic |
| AACGGGCTCTCATTGCAGTT+CGG | 0.484773 | 5.2:-80565379 | None:intergenic |
| GCAACACAACGGACAGACTT+AGG | 0.485288 | 5.2:+80566975 | MS.gene81318:CDS |
| TACCAATGTAGGTTTGTCAA+TGG | 0.485334 | 5.2:+80566773 | MS.gene81318:intron |
| CTTTCATGTTCGGGTGATGC+GGG | 0.485777 | 5.2:-80563732 | None:intergenic |
| TATTTACATTCGTCCTTCAT+CGG | 0.488396 | 5.2:-80563142 | None:intergenic |
| AGCCATACAACCAGAAGATA+AGG | 0.488404 | 5.2:-80564965 | None:intergenic |
| TGATCAAGTTTGCATAGTCT+TGG | 0.495087 | 5.2:-80562876 | None:intergenic |
| ATATTTGTAGCGTGCACTGA+AGG | 0.495187 | 5.2:+80562254 | MS.gene81318:intron |
| AATGATGTGCTTTCATGTTC+GGG | 0.496888 | 5.2:-80563741 | None:intergenic |
| GGACGAATTGTTGTACGATT+GGG | 0.499702 | 5.2:+80562667 | MS.gene81318:CDS |
| AAGAGAATGATGAACATAAG+AGG | 0.503284 | 5.2:+80560983 | MS.gene81318:CDS |
| TTCGCCCGAGCTTTCTAGAT+CGG | 0.507119 | 5.2:-80565195 | None:intergenic |
| TCATGCGAACTCTGTTGATT+GGG | 0.517031 | 5.2:+80562065 | MS.gene81318:CDS |
| TTGCAATGCTTGTCCGATGA+AGG | 0.517404 | 5.2:+80563129 | MS.gene81318:CDS |
| GCTCTCATTGCAGTTCGGAC+TGG | 0.517673 | 5.2:-80565374 | None:intergenic |
| AACATACTTTCAAGTTAATG+AGG | 0.517883 | 5.2:+80565415 | MS.gene81318:CDS |
| ACAATTGATTGATCTGTGGT+TGG | 0.524864 | 5.2:-80563588 | None:intergenic |
| GTTAATATGTACCTTTCCAA+AGG | 0.526832 | 5.2:-80563015 | None:intergenic |
| TGGACGAATTGTTGTACGAT+TGG | 0.537128 | 5.2:+80562666 | MS.gene81318:CDS |
| TAAAGCCGATCTAGAAAGCT+CGG | 0.538043 | 5.2:+80565190 | MS.gene81318:intron |
| TGGACTGGGTTTGAAAAGTG+TGG | 0.550538 | 5.2:+80562482 | MS.gene81318:CDS |
| TGAAAGGTGGATGTAAATGT+TGG | 0.551551 | 5.2:+80562646 | MS.gene81318:intron |
| TGAGAGTGACGAAGATATTG+AGG | 0.552359 | 5.2:+80563800 | MS.gene81318:CDS |
| TCAGTTGATAACCTTTGGAA+AGG | 0.560599 | 5.2:+80563004 | MS.gene81318:CDS |
| AATTGTTGTACGATTGGGAT+GGG | 0.560991 | 5.2:+80562672 | MS.gene81318:CDS |
| TATTTGTAGCGTGCACTGAA+GGG | 0.561768 | 5.2:+80562255 | MS.gene81318:intron |
| TGCTACAATTGATTGATCTG+TGG | 0.563076 | 5.2:-80563592 | None:intergenic |
| TCCAACAATTATCAGAGTAT+GGG | 0.563545 | 5.2:-80563647 | None:intergenic |
| ATTATGCAAGTTCTCTTGCA+AGG | 0.566239 | 5.2:+80563164 | MS.gene81318:CDS |
| CGATGCAAAATAGATGATAT+AGG | 0.570163 | 5.2:-80566953 | None:intergenic |
| TCCAAAACTGAGCCTTTCCA+TGG | 0.572193 | 5.2:-80561556 | None:intergenic |
| TCTCGTCATTGATGATGTCC+CGG | 0.576823 | 5.2:-80565618 | None:intergenic |
| GTATGGGAAACAATATGCAT+TGG | 0.583379 | 5.2:-80563631 | None:intergenic |
| TCTGTTCAGTTATGTCCTCA+CGG | 0.583444 | 5.2:+80564802 | MS.gene81318:intron |
| GCTTTCATGTTCGGGTGATG+CGG | 0.584502 | 5.2:-80563733 | None:intergenic |
| AAAGCCGATCTAGAAAGCTC+GGG | 0.593461 | 5.2:+80565191 | MS.gene81318:intron |
| AGACGATTCTTACCATGGAA+AGG | 0.600387 | 5.2:+80561544 | MS.gene81318:CDS |
| GAATTGTTGTACGATTGGGA+TGG | 0.601169 | 5.2:+80562671 | MS.gene81318:CDS |
| AAAGAAGAGTAAGAAACAGG+AGG | 0.611848 | 5.2:+80561948 | MS.gene81318:CDS |
| ACTCAGATTCTCGTAGTAGG+AGG | 0.613815 | 5.2:+80561908 | MS.gene81318:CDS |
| CATTTATGTCACTTGCTGCG+AGG | 0.615123 | 5.2:+80561710 | MS.gene81318:CDS |
| ACACCTACCTCAGCTAGAAG+AGG | 0.616104 | 5.2:-80564833 | None:intergenic |
| GTGATAGACGATTCTTACCA+TGG | 0.616260 | 5.2:+80561539 | MS.gene81318:CDS |
| GATGGATCATCATGTTCTCG+TGG | 0.618593 | 5.2:-80564941 | None:intergenic |
| ATAGTTCGTGTTCCATAGAG+AGG | 0.620282 | 5.2:+80561884 | MS.gene81318:CDS |
| CCATACAACCAGAAGATAAG+GGG | 0.626627 | 5.2:-80564963 | None:intergenic |
| ATGTGTCTGACCATTTGTCA+AGG | 0.628731 | 5.2:+80561608 | MS.gene81318:CDS |
| ATTGTGAAGCATTAACGCCA+TGG | 0.630733 | 5.2:-80563899 | None:intergenic |
| CACCTACCTCAGCTAGAAGA+GGG | 0.630964 | 5.2:-80564832 | None:intergenic |
| ACAACCAGAAGATAAGGGGA+TGG | 0.637113 | 5.2:-80564959 | None:intergenic |
| TAATCACCCTCTTCTAGCTG+AGG | 0.639180 | 5.2:+80564826 | MS.gene81318:CDS |
| AGAATGATGAACATAAGAGG+AGG | 0.639662 | 5.2:+80560986 | MS.gene81318:CDS |
| CATCGCTAACTAATTTGACA+GGG | 0.643527 | 5.2:-80561735 | None:intergenic |
| AAGGGATTTATGGATAACCA+TGG | 0.651198 | 5.2:+80562273 | MS.gene81318:CDS |
| AAGCAAGACTGACTTGCATG+AGG | 0.668168 | 5.2:+80565220 | MS.gene81318:CDS |
| GCTGAAGCTATTGAAAAGCG+TGG | 0.671675 | 5.2:+80562120 | MS.gene81318:CDS |
| GGATCATCATGTTCTCGTGG+AGG | 0.683144 | 5.2:-80564938 | None:intergenic |
| GAAGAGGGTGATTATCCGTG+AGG | 0.707601 | 5.2:-80564817 | None:intergenic |
| GGGACATCATCAATGACGAG+AGG | 0.729610 | 5.2:+80565620 | MS.gene81318:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAACTTTAC+GGG | - | chr5.2:80562755-80562774 | None:intergenic | 10.0% |
| !! | TTGCATTTATTTATTAAATT+TGG | + | chr5.2:80563193-80563212 | MS.gene81318:intron | 10.0% |
| !!! | AATTTTTTTAGAAAATACTT+TGG | + | chr5.2:80561242-80561261 | MS.gene81318:intron | 10.0% |
| !!! | CAATTTTTTTTACAAATAAA+AGG | + | chr5.2:80565319-80565338 | MS.gene81318:intron | 10.0% |
| !!! | CTTTTATTTGTAAAAAAAAT+TGG | - | chr5.2:80565321-80565340 | None:intergenic | 10.0% |
| !! | AAAATAACAAAGTTCATTAA+TGG | - | chr5.2:80565861-80565880 | None:intergenic | 15.0% |
| !! | AAAGAATAACATAAGAATAT+AGG | - | chr5.2:80564026-80564045 | None:intergenic | 15.0% |
| !! | AACAACAATGAATTTATAAT+TGG | - | chr5.2:80561477-80561496 | None:intergenic | 15.0% |
| !! | AGACTAATATTAAAAAGAAA+CGG | + | chr5.2:80566700-80566719 | MS.gene81318:intron | 15.0% |
| !! | ATTAAAGATAATTCAACTTA+TGG | - | chr5.2:80561138-80561157 | None:intergenic | 15.0% |
| !! | ATTACATATTACAATTAACA+AGG | - | chr5.2:80563296-80563315 | None:intergenic | 15.0% |
| !! | ATTAGATTAATAAACTTTGT+AGG | + | chr5.2:80561517-80561536 | MS.gene81318:intron | 15.0% |
| !! | TACATAAAGAAAATGAATTA+AGG | + | chr5.2:80565673-80565692 | MS.gene81318:intron | 15.0% |
| !! | TATAAGAATACACAAAAAAT+AGG | - | chr5.2:80565172-80565191 | None:intergenic | 15.0% |
| !! | TATACTTGAAAAGAAAATAT+TGG | + | chr5.2:80561978-80561997 | MS.gene81318:CDS | 15.0% |
| !! | TTATCTCCATAAAAATATAA+TGG | - | chr5.2:80563411-80563430 | None:intergenic | 15.0% |
| !! | TTTCATAAAATGTTAAATCT+TGG | - | chr5.2:80565348-80565367 | None:intergenic | 15.0% |
| !!! | AATGTTCATTTATGTTTTAT+AGG | + | chr5.2:80566884-80566903 | MS.gene81318:intron | 15.0% |
| !!! | AATTAGGAAAAGAAATTTTA+AGG | - | chr5.2:80564527-80564546 | None:intergenic | 15.0% |
| !!! | ATAAATAAATAACGGATTTA+TGG | + | chr5.2:80565779-80565798 | MS.gene81318:intron | 15.0% |
| !!! | ATGTTCATTTATGTTTTATA+GGG | + | chr5.2:80566885-80566904 | MS.gene81318:intron | 15.0% |
| !!! | CTTTTTAATATTAGTCTTTT+AGG | - | chr5.2:80566697-80566716 | None:intergenic | 15.0% |
| !!! | GATAATTTTGATTTTCTTAA+TGG | - | chr5.2:80563067-80563086 | None:intergenic | 15.0% |
| !!! | GTGTCAAAATATTTTTAAAA+TGG | + | chr5.2:80561446-80561465 | MS.gene81318:intron | 15.0% |
| !!! | TGATATAATTTGTCTATATT+AGG | + | chr5.2:80562393-80562412 | MS.gene81318:intron | 15.0% |
| !!! | TTCATTTTATTATCAGATTT+AGG | - | chr5.2:80561790-80561809 | None:intergenic | 15.0% |
| !! | AACATGCATAACATTAAATT+AGG | - | chr5.2:80564543-80564562 | None:intergenic | 20.0% |
| !! | ATATTCAACACCAAAAAAAT+TGG | - | chr5.2:80561661-80561680 | None:intergenic | 20.0% |
| !! | ATTATACCAAAGTCAATATT+AGG | - | chr5.2:80563502-80563521 | None:intergenic | 20.0% |
| !! | CATAATTGCTTATAAAATTC+AGG | + | chr5.2:80562152-80562171 | MS.gene81318:CDS | 20.0% |
| !! | CTTGATTAAAAAAATTCATC+TGG | - | chr5.2:80562422-80562441 | None:intergenic | 20.0% |
| !! | GTAACAATAATCTTACAATT+AGG | - | chr5.2:80563447-80563466 | None:intergenic | 20.0% |
| !! | TATTCAACACCAAAAAAATT+GGG | - | chr5.2:80561660-80561679 | None:intergenic | 20.0% |
| !! | TCAAAAAAATTACCATACAT+CGG | - | chr5.2:80563870-80563889 | None:intergenic | 20.0% |
| !! | TCAAAATTCAACAATATCTT+TGG | + | chr5.2:80562853-80562872 | MS.gene81318:CDS | 20.0% |
| !! | TCATATTCTATTATTAGCAT+CGG | + | chr5.2:80561105-80561124 | MS.gene81318:intron | 20.0% |
| !! | TTAATGATTATAAACACAGA+AGG | - | chr5.2:80565001-80565020 | None:intergenic | 20.0% |
| !! | TTACAGTTGATTAAAAGATA+TGG | - | chr5.2:80561329-80561348 | None:intergenic | 20.0% |
| !! | TTATACCAAAGTCAATATTA+GGG | - | chr5.2:80563501-80563520 | None:intergenic | 20.0% |
| !!! | ACTTTATTTATTAATGGAAG+AGG | + | chr5.2:80563229-80563248 | MS.gene81318:intron | 20.0% |
| !!! | AGATATTGTTGAATTTTGAT+TGG | - | chr5.2:80562852-80562871 | None:intergenic | 20.0% |
| !!! | CTTAATTTACCCAATTTTTT+TGG | + | chr5.2:80561648-80561667 | MS.gene81318:intron | 20.0% |
| !!! | CTTTATTTATTAATGGAAGA+GGG | + | chr5.2:80563230-80563249 | MS.gene81318:intron | 20.0% |
| !!! | GAATATTTTTTGAGCATATA+TGG | + | chr5.2:80562462-80562481 | MS.gene81318:CDS | 20.0% |
| !!! | GCAATGACTTTATTTATTAA+TGG | + | chr5.2:80563223-80563242 | MS.gene81318:intron | 20.0% |
| !!! | TTATGTATTTGAATTGATTC+TGG | - | chr5.2:80562715-80562734 | None:intergenic | 20.0% |
| !!! | TTGTGTCCATTATATTTTTA+TGG | + | chr5.2:80563402-80563421 | MS.gene81318:intron | 20.0% |
| !!! | TTTCTTAGGTGTTTTTTATA+TGG | - | chr5.2:80565821-80565840 | None:intergenic | 20.0% |
| ! | AAAACTTAGTTCATTTCCTT+AGG | + | chr5.2:80565699-80565718 | MS.gene81318:intron | 25.0% |
| ! | AAAATAGATGATATAGGTCT+TGG | - | chr5.2:80566950-80566969 | None:intergenic | 25.0% |
| ! | AAAGTTAGCACAAATACAAT+CGG | - | chr5.2:80566110-80566129 | None:intergenic | 25.0% |
| ! | AAATAAATTAAGAAGATGCC+AGG | - | chr5.2:80562918-80562937 | None:intergenic | 25.0% |
| ! | AAGAAAACTCTACCATAAAA+TGG | + | chr5.2:80561023-80561042 | MS.gene81318:CDS | 25.0% |
| ! | AAGCAAAATGTTCATGTTAT+AGG | + | chr5.2:80562439-80562458 | MS.gene81318:intron | 25.0% |
| ! | AATTTCTTTGTCATCAACTT+TGG | - | chr5.2:80561860-80561879 | None:intergenic | 25.0% |
| ! | ACATATATGTTGTCTTGTAT+AGG | + | chr5.2:80562967-80562986 | MS.gene81318:intron | 25.0% |
| ! | AGATATATTAGCCAAATACA+AGG | - | chr5.2:80562944-80562963 | None:intergenic | 25.0% |
| ! | AGCAAAATGTTCATGTTATA+GGG | + | chr5.2:80562440-80562459 | MS.gene81318:intron | 25.0% |
| ! | ATATGCTAATATGTATATGC+AGG | + | chr5.2:80563541-80563560 | MS.gene81318:intron | 25.0% |
| ! | ATTATCTTAAAATGTTCTGC+AGG | + | chr5.2:80563081-80563100 | MS.gene81318:intron | 25.0% |
| ! | ATTCTATCAAATACCAATGT+AGG | + | chr5.2:80566762-80566781 | MS.gene81318:intron | 25.0% |
| ! | CAATTAATGTTCCTAGAAAA+TGG | + | chr5.2:80565558-80565577 | MS.gene81318:CDS | 25.0% |
| ! | CATATTCTATTATTAGCATC+GGG | + | chr5.2:80561106-80561125 | MS.gene81318:intron | 25.0% |
| ! | CTGAGCAAAAATTTACTATT+AGG | - | chr5.2:80561370-80561389 | None:intergenic | 25.0% |
| ! | GAACATGCGTTTATAATTTA+CGG | + | chr5.2:80564155-80564174 | MS.gene81318:intron | 25.0% |
| ! | GAATATCATACACTATACTT+TGG | + | chr5.2:80565648-80565667 | MS.gene81318:intron | 25.0% |
| ! | GACAATGCATATATATAATG+TGG | + | chr5.2:80563267-80563286 | MS.gene81318:intron | 25.0% |
| ! | TAAAAAGAAGAGTAAGAAAC+AGG | + | chr5.2:80561945-80561964 | MS.gene81318:CDS | 25.0% |
| ! | TAAAGCTTCTATTGCATATT+TGG | + | chr5.2:80565446-80565465 | MS.gene81318:intron | 25.0% |
| ! | TACTTAGTACATTTCATCAA+GGG | - | chr5.2:80564578-80564597 | None:intergenic | 25.0% |
| ! | TAGAACTGTCAAAAATAGAT+TGG | - | chr5.2:80566182-80566201 | None:intergenic | 25.0% |
| ! | TGAGAGTCTTAACAATATTA+AGG | - | chr5.2:80564115-80564134 | None:intergenic | 25.0% |
| ! | TTACTTAGTACATTTCATCA+AGG | - | chr5.2:80564579-80564598 | None:intergenic | 25.0% |
| ! | TTGTTAAGGAAACTTAAAAG+AGG | + | chr5.2:80566223-80566242 | MS.gene81318:intron | 25.0% |
| !! | AAGAAACAGATAGCATATTT+TGG | + | chr5.2:80565593-80565612 | MS.gene81318:CDS | 25.0% |
| !! | AGAATGATATCACCATTTTA+TGG | - | chr5.2:80561038-80561057 | None:intergenic | 25.0% |
| !! | ATTAAAGACTTCTTTTGCAA+AGG | + | chr5.2:80566801-80566820 | MS.gene81318:CDS | 25.0% |
| !! | ATTACTTCAACTTTTGATGA+TGG | - | chr5.2:80560907-80560926 | None:intergenic | 25.0% |
| !! | ATTTATTTGAGCCTTGTATT+TGG | + | chr5.2:80562930-80562949 | MS.gene81318:intron | 25.0% |
| !! | ATTTGAATTGATTCTGGTAA+TGG | - | chr5.2:80562709-80562728 | None:intergenic | 25.0% |
| !! | GCAATATCTTTTTCTTTTGT+AGG | + | chr5.2:80565505-80565524 | MS.gene81318:intron | 25.0% |
| !! | TCATACAAAACTAGTTTGTA+AGG | - | chr5.2:80564190-80564209 | None:intergenic | 25.0% |
| !! | TCTTCAACATATTTCTTTTC+CGG | + | chr5.2:80562524-80562543 | MS.gene81318:CDS | 25.0% |
| !! | TTCATTAATGGACAAAACTT+TGG | - | chr5.2:80565849-80565868 | None:intergenic | 25.0% |
| !! | TTTAACTTTACCTTGACAAA+TGG | - | chr5.2:80561621-80561640 | None:intergenic | 25.0% |
| !!! | AAACTTTGGTGTATTTTCTT+AGG | - | chr5.2:80565835-80565854 | None:intergenic | 25.0% |
| !!! | AACATACTTTCAAGTTAATG+AGG | + | chr5.2:80565415-80565434 | MS.gene81318:CDS | 25.0% |
| !!! | CATTTTCTAGGAACATTAAT+TGG | - | chr5.2:80565560-80565579 | None:intergenic | 25.0% |
| !!! | GAAATGAAGTTTTAGCTTTT+AGG | + | chr5.2:80564465-80564484 | MS.gene81318:intron | 25.0% |
| !!! | GACACATTTTTTCTTCTAAA+AGG | + | chr5.2:80565099-80565118 | MS.gene81318:intron | 25.0% |
| !!! | TATTAGAAGAGAGTTTTGAA+AGG | + | chr5.2:80566452-80566471 | MS.gene81318:intron | 25.0% |
| !!! | TCAAAAATAGATTGGTCTAA+TGG | - | chr5.2:80566174-80566193 | None:intergenic | 25.0% |
| !!! | TGAAATATGTCACTTTTGAA+AGG | + | chr5.2:80562630-80562649 | MS.gene81318:intron | 25.0% |
| AAACAATGCATATGTGTATG+TGG | - | chr5.2:80563469-80563488 | None:intergenic | 30.0% | |
| AAACCTGTTTCAAAACAACA+TGG | - | chr5.2:80562823-80562842 | None:intergenic | 30.0% | |
| AAAGATGATGATAACACTCT+TGG | - | chr5.2:80564236-80564255 | None:intergenic | 30.0% | |
| AAATGACTGTTTGTAGCATT+TGG | - | chr5.2:80563942-80563961 | None:intergenic | 30.0% | |
| AAATGTTAACAAGTGTCCTA+AGG | - | chr5.2:80566673-80566692 | None:intergenic | 30.0% | |
| AAGAGAATGATGAACATAAG+AGG | + | chr5.2:80560983-80561002 | MS.gene81318:CDS | 30.0% | |
| ACTCTTGTTAATAAGTAGAG+CGG | + | chr5.2:80566059-80566078 | MS.gene81318:intron | 30.0% | |
| AGAAATAGAAGAACATTAGG+AGG | + | chr5.2:80566359-80566378 | MS.gene81318:intron | 30.0% | |
| AGAGCAATTGATACAAAAAC+AGG | + | chr5.2:80566920-80566939 | MS.gene81318:CDS | 30.0% | |
| AGTCAATATTAGGGAGTAAA+TGG | - | chr5.2:80563492-80563511 | None:intergenic | 30.0% | |
| ATGTTCCATTCAAAGGAAAA+CGG | - | chr5.2:80565400-80565419 | None:intergenic | 30.0% | |
| ATGTTCCTAGAAAATGGATA+TGG | + | chr5.2:80565564-80565583 | MS.gene81318:CDS | 30.0% | |
| ATTCTAAATTCATGCTTCCA+TGG | - | chr5.2:80562293-80562312 | None:intergenic | 30.0% | |
| ATTTCCTGAAATTTGTCCAT+GGG | - | chr5.2:80561205-80561224 | None:intergenic | 30.0% | |
| CACTCTCATAAGTATAATCA+TGG | - | chr5.2:80563788-80563807 | None:intergenic | 30.0% | |
| CATCATACATTGTAATTACC+TGG | + | chr5.2:80562897-80562916 | MS.gene81318:intron | 30.0% | |
| CGATGCAAAATAGATGATAT+AGG | - | chr5.2:80566956-80566975 | None:intergenic | 30.0% | |
| CTCTCATATTAGATGAGATA+TGG | + | chr5.2:80564129-80564148 | MS.gene81318:intron | 30.0% | |
| GGAAAAGAAAATGCAACATT+GGG | + | chr5.2:80561999-80562018 | MS.gene81318:CDS | 30.0% | |
| GGAAGAAATAGAAGAACATT+AGG | + | chr5.2:80566356-80566375 | MS.gene81318:intron | 30.0% | |
| GTGTCTACTTATATTCTTAC+CGG | - | chr5.2:80562546-80562565 | None:intergenic | 30.0% | |
| GTTAATATGTACCTTTCCAA+AGG | - | chr5.2:80563018-80563037 | None:intergenic | 30.0% | |
| TAAAAAGAAACGGCTAGAAT+TGG | + | chr5.2:80566710-80566729 | MS.gene81318:intron | 30.0% | |
| TACACTTACTTTGCTTCATT+TGG | - | chr5.2:80562333-80562352 | None:intergenic | 30.0% | |
| TATTTACATTCGTCCTTCAT+CGG | - | chr5.2:80563145-80563164 | None:intergenic | 30.0% | |
| TCCAACAATTATCAGAGTAT+GGG | - | chr5.2:80563650-80563669 | None:intergenic | 30.0% | |
| TGACTACTGAAGTTAAATGT+TGG | - | chr5.2:80563831-80563850 | None:intergenic | 30.0% | |
| TGGAAAAGAAAATGCAACAT+TGG | + | chr5.2:80561998-80562017 | MS.gene81318:CDS | 30.0% | |
| TTAAGGAAACTTAAAAGAGG+AGG | + | chr5.2:80566226-80566245 | MS.gene81318:intron | 30.0% | |
| ! | AGATTCCATATCCATTTTCT+AGG | - | chr5.2:80565572-80565591 | None:intergenic | 30.0% |
| ! | ATGGAAGCATGAATTTAGAA+TGG | + | chr5.2:80562292-80562311 | MS.gene81318:CDS | 30.0% |
| ! | CTTTGTTTGGATGTTTAGAA+GGG | - | chr5.2:80566650-80566669 | None:intergenic | 30.0% |
| ! | GTAAATAGTTGATATGCATG+TGG | + | chr5.2:80564595-80564614 | MS.gene81318:intron | 30.0% |
| ! | TGAAAGTATGTTCCATTCAA+AGG | - | chr5.2:80565407-80565426 | None:intergenic | 30.0% |
| ! | TTCTATTATCGAAGTTCTGA+AGG | + | chr5.2:80566197-80566216 | MS.gene81318:intron | 30.0% |
| ! | TTGTTTAGTTCCTCAAAATG+AGG | - | chr5.2:80566429-80566448 | None:intergenic | 30.0% |
| !! | ATTCTGGTAATGGTTGTAAA+GGG | - | chr5.2:80562699-80562718 | None:intergenic | 30.0% |
| !! | CATTATCAGTTGATAACCTT+TGG | + | chr5.2:80562999-80563018 | MS.gene81318:CDS | 30.0% |
| !! | TTACTCCCTAATATTGACTT+TGG | + | chr5.2:80563493-80563512 | MS.gene81318:intron | 30.0% |
| !! | TTTTTGAGCATATATGGACT+GGG | + | chr5.2:80562468-80562487 | MS.gene81318:CDS | 30.0% |
| !!! | AACCAACCTTTTTTTTTAGC+AGG | + | chr5.2:80561178-80561197 | MS.gene81318:intron | 30.0% |
| !!! | AATATGTCACTTTTGAAAGG+TGG | + | chr5.2:80562633-80562652 | MS.gene81318:intron | 30.0% |
| !!! | TAACCATGTTGTTTTGAAAC+AGG | + | chr5.2:80562817-80562836 | MS.gene81318:intron | 30.0% |
| !!! | TGGGTTTTGAAAAAAAAGGA+AGG | + | chr5.2:80566326-80566345 | MS.gene81318:intron | 30.0% |
| !!! | TGTTGAATTTTGATTGGATC+CGG | - | chr5.2:80562846-80562865 | None:intergenic | 30.0% |
| !!! | TTTTTTGAAGAGTTTGACCA+TGG | + | chr5.2:80563882-80563901 | MS.gene81318:CDS | 30.0% |
| !!! | TTTTTTGAGCATATATGGAC+TGG | + | chr5.2:80562467-80562486 | MS.gene81318:CDS | 30.0% |
| AAAAAAAAGGAAGGAGCAAG+TGG | + | chr5.2:80566335-80566354 | MS.gene81318:intron | 35.0% | |
| AAAAATTACCATACATCGGC+AGG | - | chr5.2:80563866-80563885 | None:intergenic | 35.0% | |
| AAACATCCAAACAAAGCCTT+AGG | + | chr5.2:80566654-80566673 | MS.gene81318:intron | 35.0% | |
| AAAGAAGAGTAAGAAACAGG+AGG | + | chr5.2:80561948-80561967 | MS.gene81318:CDS | 35.0% | |
| AAAGAATAGCATGCATTGTC+AGG | - | chr5.2:80564353-80564372 | None:intergenic | 35.0% | |
| AAGGGATTTATGGATAACCA+TGG | + | chr5.2:80562273-80562292 | MS.gene81318:CDS | 35.0% | |
| AATGATGTGCTTTCATGTTC+GGG | - | chr5.2:80563744-80563763 | None:intergenic | 35.0% | |
| AATTGTTGTACGATTGGGAT+GGG | + | chr5.2:80562672-80562691 | MS.gene81318:CDS | 35.0% | |
| ACAATTGATTGATCTGTGGT+TGG | - | chr5.2:80563591-80563610 | None:intergenic | 35.0% | |
| ACATGATCCAACCAAAAGTA+TGG | + | chr5.2:80566135-80566154 | MS.gene81318:intron | 35.0% | |
| ACTTACTTTGCTTCATTTGG+TGG | - | chr5.2:80562330-80562349 | None:intergenic | 35.0% | |
| AGAATGATGAACATAAGAGG+AGG | + | chr5.2:80560986-80561005 | MS.gene81318:CDS | 35.0% | |
| ATCAATTGTAGCAACCCAAA+TGG | + | chr5.2:80563602-80563621 | MS.gene81318:CDS | 35.0% | |
| ATGGGTCCTGCTAAAAAAAA+AGG | - | chr5.2:80561187-80561206 | None:intergenic | 35.0% | |
| ATTATGCAAGTTCTCTTGCA+AGG | + | chr5.2:80563164-80563183 | MS.gene81318:CDS | 35.0% | |
| CAATGATGTGCTTTCATGTT+CGG | - | chr5.2:80563745-80563764 | None:intergenic | 35.0% | |
| CATCGCTAACTAATTTGACA+GGG | - | chr5.2:80561738-80561757 | None:intergenic | 35.0% | |
| CATTTCCTGAAATTTGTCCA+TGG | - | chr5.2:80561206-80561225 | None:intergenic | 35.0% | |
| CGATGAGCAAAACAAAAACA+TGG | + | chr5.2:80561753-80561772 | MS.gene81318:CDS | 35.0% | |
| CTCCAACAATTATCAGAGTA+TGG | - | chr5.2:80563651-80563670 | None:intergenic | 35.0% | |
| GGACATAACTGAACAGATAA+AGG | - | chr5.2:80564799-80564818 | None:intergenic | 35.0% | |
| GTATGGGAAACAATATGCAT+TGG | - | chr5.2:80563634-80563653 | None:intergenic | 35.0% | |
| GTCCTGCTAAAAAAAAAGGT+TGG | - | chr5.2:80561183-80561202 | None:intergenic | 35.0% | |
| TAATAAGTAGAGCGGTCAAA+TGG | + | chr5.2:80566067-80566086 | MS.gene81318:intron | 35.0% | |
| TACCAATGTAGGTTTGTCAA+TGG | + | chr5.2:80566773-80566792 | MS.gene81318:intron | 35.0% | |
| TCATCGCTAACTAATTTGAC+AGG | - | chr5.2:80561739-80561758 | None:intergenic | 35.0% | |
| TCCCATACTCTGATAATTGT+TGG | + | chr5.2:80563646-80563665 | MS.gene81318:CDS | 35.0% | |
| TCTTACAATTAGGTGTGAAG+AGG | - | chr5.2:80563437-80563456 | None:intergenic | 35.0% | |
| TGAAAGAGAGCTTGTCTTTA+GGG | + | chr5.2:80565077-80565096 | MS.gene81318:intron | 35.0% | |
| TGAAAGGTGGATGTAAATGT+TGG | + | chr5.2:80562646-80562665 | MS.gene81318:intron | 35.0% | |
| TGATCAAGTTTGCATAGTCT+TGG | - | chr5.2:80562879-80562898 | None:intergenic | 35.0% | |
| TGCTACAATTGATTGATCTG+TGG | - | chr5.2:80563595-80563614 | None:intergenic | 35.0% | |
| TGCTCAGCATAGATATCAAT+GGG | + | chr5.2:80561383-80561402 | MS.gene81318:intron | 35.0% | |
| TGTTCCATTCAAAGGAAAAC+GGG | - | chr5.2:80565399-80565418 | None:intergenic | 35.0% | |
| TTAGTTCCTCAAAATGAGGA+GGG | - | chr5.2:80566425-80566444 | None:intergenic | 35.0% | |
| TTCCATTGACAAACCTACAT+TGG | - | chr5.2:80566778-80566797 | None:intergenic | 35.0% | |
| TTGAAAGAGAGCTTGTCTTT+AGG | + | chr5.2:80565076-80565095 | MS.gene81318:intron | 35.0% | |
| TTGCTCAGCATAGATATCAA+TGG | + | chr5.2:80561382-80561401 | MS.gene81318:intron | 35.0% | |
| TTTGGATGTTTAGAAGGGAA+GGG | - | chr5.2:80566645-80566664 | None:intergenic | 35.0% | |
| ! | ACATTAGGAGGAGAAGATTT+TGG | + | chr5.2:80566371-80566390 | MS.gene81318:intron | 35.0% |
| ! | ACTACTTCAAGTGCTTTAAG+TGG | + | chr5.2:80564433-80564452 | MS.gene81318:intron | 35.0% |
| ! | ATGAACATAAGAGGAGGTAT+TGG | + | chr5.2:80560992-80561011 | MS.gene81318:CDS | 35.0% |
| ! | CAACCAAAAGTATGGGATAA+TGG | + | chr5.2:80566143-80566162 | MS.gene81318:intron | 35.0% |
| ! | CATGATCCAACCAAAAGTAT+GGG | + | chr5.2:80566136-80566155 | MS.gene81318:intron | 35.0% |
| ! | CATTATCCCATACTTTTGGT+TGG | - | chr5.2:80566145-80566164 | None:intergenic | 35.0% |
| ! | TATTTTGCATCGCAACACAA+CGG | + | chr5.2:80566964-80566983 | MS.gene81318:CDS | 35.0% |
| ! | TTTAGTTCCTCAAAATGAGG+AGG | - | chr5.2:80566426-80566445 | None:intergenic | 35.0% |
| !! | AAAAGTATGGGATAATGGAC+CGG | + | chr5.2:80566148-80566167 | MS.gene81318:intron | 35.0% |
| !! | AAATAGATTGGTCTAATGGC+CGG | - | chr5.2:80566170-80566189 | None:intergenic | 35.0% |
| !! | AATCATATGAAGAGCACCTA+AGG | - | chr5.2:80565718-80565737 | None:intergenic | 35.0% |
| !! | AGAGGAGGTTTTGTATTGAA+AGG | + | chr5.2:80566241-80566260 | MS.gene81318:intron | 35.0% |
| !! | GATTCTGGTAATGGTTGTAA+AGG | - | chr5.2:80562700-80562719 | None:intergenic | 35.0% |
| !! | GCTTTGTTTGGATGTTTAGA+AGG | - | chr5.2:80566651-80566670 | None:intergenic | 35.0% |
| !! | TCAGTTGATAACCTTTGGAA+AGG | + | chr5.2:80563004-80563023 | MS.gene81318:CDS | 35.0% |
| !! | TGAACATAAGAGGAGGTATT+GGG | + | chr5.2:80560993-80561012 | MS.gene81318:CDS | 35.0% |
| !! | TGTGTTGATCACTTTTAGAG+TGG | - | chr5.2:80562041-80562060 | None:intergenic | 35.0% |
| !!! | AGATAGCATATTTTGGTACC+GGG | + | chr5.2:80565600-80565619 | MS.gene81318:CDS | 35.0% |
| !!! | CAGATAGCATATTTTGGTAC+CGG | + | chr5.2:80565599-80565618 | MS.gene81318:CDS | 35.0% |
| !!! | GTTGTTTTGAAACAGGTTTC+CGG | + | chr5.2:80562824-80562843 | MS.gene81318:intron | 35.0% |
| !!! | TTTTTTTTTAGCAGGACCCA+TGG | + | chr5.2:80561186-80561205 | MS.gene81318:intron | 35.0% |
| AACAGTTCTTGGAACACTTC+TGG | + | chr5.2:80565262-80565281 | MS.gene81318:CDS | 40.0% | |
| ACAGAGCATAGCATACAATG+TGG | - | chr5.2:80561280-80561299 | None:intergenic | 40.0% | |
| ACGAAGAGACATTACGAGTA+TGG | + | chr5.2:80560932-80560951 | MS.gene81318:CDS | 40.0% | |
| AGAATCTGAGTTCCTCTCTA+TGG | - | chr5.2:80561899-80561918 | None:intergenic | 40.0% | |
| AGACGATTCTTACCATGGAA+AGG | + | chr5.2:80561544-80561563 | MS.gene81318:CDS | 40.0% | |
| AGCCATACAACCAGAAGATA+AGG | - | chr5.2:80564968-80564987 | None:intergenic | 40.0% | |
| AGTCAGACTGAAACAGTTCT+TGG | + | chr5.2:80565251-80565270 | MS.gene81318:CDS | 40.0% | |
| ATAGTTCGTGTTCCATAGAG+AGG | + | chr5.2:80561884-80561903 | MS.gene81318:CDS | 40.0% | |
| ATATTTGTAGCGTGCACTGA+AGG | + | chr5.2:80562254-80562273 | MS.gene81318:intron | 40.0% | |
| ATCATGCGAACTCTGTTGAT+TGG | + | chr5.2:80562064-80562083 | MS.gene81318:CDS | 40.0% | |
| ATGTGTCTGACCATTTGTCA+AGG | + | chr5.2:80561608-80561627 | MS.gene81318:CDS | 40.0% | |
| CCATACAACCAGAAGATAAG+GGG | - | chr5.2:80564966-80564985 | None:intergenic | 40.0% | |
| GAATTGTTGTACGATTGGGA+TGG | + | chr5.2:80562671-80562690 | MS.gene81318:CDS | 40.0% | |
| GATCAAGTGCATACTGTTCA+AGG | + | chr5.2:80561060-80561079 | MS.gene81318:CDS | 40.0% | |
| GCCATACAACCAGAAGATAA+GGG | - | chr5.2:80564967-80564986 | None:intergenic | 40.0% | |
| GGACGAATTGTTGTACGATT+GGG | + | chr5.2:80562667-80562686 | MS.gene81318:CDS | 40.0% | |
| GTGACATAAATGCAGAGCTT+TGG | - | chr5.2:80561702-80561721 | None:intergenic | 40.0% | |
| GTGATAGACGATTCTTACCA+TGG | + | chr5.2:80561539-80561558 | MS.gene81318:CDS | 40.0% | |
| GTTTGGATGTTTAGAAGGGA+AGG | - | chr5.2:80566646-80566665 | None:intergenic | 40.0% | |
| TAAAGCCGATCTAGAAAGCT+CGG | + | chr5.2:80565190-80565209 | MS.gene81318:intron | 40.0% | |
| TATTTGTAGCGTGCACTGAA+GGG | + | chr5.2:80562255-80562274 | MS.gene81318:intron | 40.0% | |
| TCTGTTCAGTTATGTCCTCA+CGG | + | chr5.2:80564802-80564821 | MS.gene81318:intron | 40.0% | |
| TGAGAGTGACGAAGATATTG+AGG | + | chr5.2:80563800-80563819 | MS.gene81318:CDS | 40.0% | |
| TGGACGAATTGTTGTACGAT+TGG | + | chr5.2:80562666-80562685 | MS.gene81318:CDS | 40.0% | |
| ! | ATCGGACAAGCATTGCAATT+TGG | - | chr5.2:80563127-80563146 | None:intergenic | 40.0% |
| ! | ATGCATTGGCATGATCCATT+TGG | - | chr5.2:80563620-80563639 | None:intergenic | 40.0% |
| ! | ATTGTGAAGCATTAACGCCA+TGG | - | chr5.2:80563902-80563921 | None:intergenic | 40.0% |
| ! | CTAATTCCCCTGACTTTTTG+CGG | - | chr5.2:80560870-80560889 | None:intergenic | 40.0% |
| ! | GCCAAAAAGCAACAGTTTTC+AGG | - | chr5.2:80564505-80564524 | None:intergenic | 40.0% |
| ! | GGTCCATTATCCCATACTTT+TGG | - | chr5.2:80566149-80566168 | None:intergenic | 40.0% |
| ! | GTGCTTTAAGTGGATGTGTT+TGG | + | chr5.2:80564443-80564462 | MS.gene81318:intron | 40.0% |
| ! | TAGGAGGAGAAGATTTTGGA+GGG | + | chr5.2:80566375-80566394 | MS.gene81318:intron | 40.0% |
| ! | TCATGCGAACTCTGTTGATT+GGG | + | chr5.2:80562065-80562084 | MS.gene81318:CDS | 40.0% |
| ! | TCGGACAAGCATTGCAATTT+GGG | - | chr5.2:80563126-80563145 | None:intergenic | 40.0% |
| ! | TGCATTGGCATGATCCATTT+GGG | - | chr5.2:80563619-80563638 | None:intergenic | 40.0% |
| ! | TTAGGAGGAGAAGATTTTGG+AGG | + | chr5.2:80566374-80566393 | MS.gene81318:intron | 40.0% |
| !! | AAGTGTCCTAAGGCTTTGTT+TGG | - | chr5.2:80566663-80566682 | None:intergenic | 40.0% |
| !! | AGTTCTGAAGGCACTTGTTA+AGG | + | chr5.2:80566209-80566228 | MS.gene81318:intron | 40.0% |
| !! | ATAAACACAGAAGGAGTACC+TGG | - | chr5.2:80564992-80565011 | None:intergenic | 40.0% |
| !!! | GATTGATCTGTGGTTGGTTT+TGG | - | chr5.2:80563585-80563604 | None:intergenic | 40.0% |
| !!! | GCCTGAAAACTGTTGCTTTT+TGG | + | chr5.2:80564501-80564520 | MS.gene81318:intron | 40.0% |
| !!! | GGGGTGGGTTTTGAAAAAAA+AGG | + | chr5.2:80566322-80566341 | MS.gene81318:intron | 40.0% |
| AAAGCCGATCTAGAAAGCTC+GGG | + | chr5.2:80565191-80565210 | MS.gene81318:intron | 45.0% | |
| ACAACCAGAAGATAAGGGGA+TGG | - | chr5.2:80564962-80564981 | None:intergenic | 45.0% | |
| ACTCAGATTCTCGTAGTAGG+AGG | + | chr5.2:80561908-80561927 | MS.gene81318:CDS | 45.0% | |
| AGAGATGTCCGCAAAAAGTC+AGG | + | chr5.2:80560859-80560878 | MS.gene81318:CDS | 45.0% | |
| AGATGTCCGCAAAAAGTCAG+GGG | + | chr5.2:80560861-80560880 | MS.gene81318:CDS | 45.0% | |
| AGGACCCATGGACAAATTTC+AGG | + | chr5.2:80561198-80561217 | MS.gene81318:intron | 45.0% | |
| GAGATGTCCGCAAAAAGTCA+GGG | + | chr5.2:80560860-80560879 | MS.gene81318:CDS | 45.0% | |
| GATGCGGGCATCTCAATTAT+AGG | - | chr5.2:80563720-80563739 | None:intergenic | 45.0% | |
| GATGGATCATCATGTTCTCG+TGG | - | chr5.2:80564944-80564963 | None:intergenic | 45.0% | |
| GCTGAAGCTATTGAAAAGCG+TGG | + | chr5.2:80562120-80562139 | MS.gene81318:CDS | 45.0% | |
| GGAACTCAGATTCTCGTAGT+AGG | + | chr5.2:80561905-80561924 | MS.gene81318:CDS | 45.0% | |
| TAGAGCGGTCAAATGGATCA+AGG | + | chr5.2:80566074-80566093 | MS.gene81318:intron | 45.0% | |
| TATGCTATGCTCTGTTCGAC+TGG | + | chr5.2:80561285-80561304 | MS.gene81318:intron | 45.0% | |
| TCCAAAACTGAGCCTTTCCA+TGG | - | chr5.2:80561559-80561578 | None:intergenic | 45.0% | |
| TGATCCATCCCCTTATCTTC+TGG | + | chr5.2:80564955-80564974 | MS.gene81318:CDS | 45.0% | |
| TTGCAATGCTTGTCCGATGA+AGG | + | chr5.2:80563129-80563148 | MS.gene81318:CDS | 45.0% | |
| TTTAGAAGGGAAGGGAAGAG+AGG | - | chr5.2:80566637-80566656 | None:intergenic | 45.0% | |
| ! | ACCATGGAAAGGCTCAGTTT+TGG | + | chr5.2:80561555-80561574 | MS.gene81318:CDS | 45.0% |
| ! | AGAGCCCGTTTTCCTTTGAA+TGG | + | chr5.2:80565392-80565411 | MS.gene81318:CDS | 45.0% |
| ! | CATTTATGTCACTTGCTGCG+AGG | + | chr5.2:80561710-80561729 | MS.gene81318:CDS | 45.0% |
| ! | CCCCTTATCTTCTGGTTGTA+TGG | + | chr5.2:80564963-80564982 | MS.gene81318:CDS | 45.0% |
| ! | TAATCACCCTCTTCTAGCTG+AGG | + | chr5.2:80564826-80564845 | MS.gene81318:CDS | 45.0% |
| ! | TGGACTGGGTTTGAAAAGTG+TGG | + | chr5.2:80562482-80562501 | MS.gene81318:CDS | 45.0% |
| !! | AAGCAAGACTGACTTGCATG+AGG | + | chr5.2:80565220-80565239 | MS.gene81318:CDS | 45.0% |
| !! | GATAGCCTTGTTTGCGAGTT+TGG | + | chr5.2:80566288-80566307 | MS.gene81318:intron | 45.0% |
| !! | TCTCGTCATTGATGATGTCC+CGG | - | chr5.2:80565621-80565640 | None:intergenic | 45.0% |
| !!! | AGGCTCAGTTTTGGATTCTG+TGG | + | chr5.2:80561564-80561583 | MS.gene81318:CDS | 45.0% |
| !!! | GGCTCAGTTTTGGATTCTGT+GGG | + | chr5.2:80561565-80561584 | MS.gene81318:CDS | 45.0% |
| !!! | TCAGTTTTGGATTCTGTGGG+TGG | + | chr5.2:80561568-80561587 | MS.gene81318:CDS | 45.0% |
| !!! | TGATCTGTGGTTGGTTTTGG+TGG | - | chr5.2:80563582-80563601 | None:intergenic | 45.0% |
| !!! | TGTGGTTGGTTTTGGTGGTA+AGG | - | chr5.2:80563577-80563596 | None:intergenic | 45.0% |
| !! | AAAAAAAAAAAAAAACTTTA+CGG | - | chr5.2:80562756-80562775 | None:intergenic | 5.0% |
| !! | AATAAATATTAAATAGTAAA+TGG | - | chr5.2:80565915-80565934 | None:intergenic | 5.0% |
| !! | ATAAATAAATACAATAAAAA+AGG | - | chr5.2:80564388-80564407 | None:intergenic | 5.0% |
| !! | TAAATAAATACAATAAAAAA+GGG | - | chr5.2:80564387-80564406 | None:intergenic | 5.0% |
| !!! | AATTTTTTTTACAAATAAAA+GGG | + | chr5.2:80565320-80565339 | MS.gene81318:intron | 5.0% |
| !!! | ATTTTAAGATAAATAAATAA+CGG | + | chr5.2:80565771-80565790 | MS.gene81318:intron | 5.0% |
| !!! | TTTTATTTGTAAAAAAAATT+GGG | - | chr5.2:80565320-80565339 | None:intergenic | 5.0% |
| ACACCTACCTCAGCTAGAAG+AGG | - | chr5.2:80564836-80564855 | None:intergenic | 50.0% | |
| CACCTACCTCAGCTAGAAGA+GGG | - | chr5.2:80564835-80564854 | None:intergenic | 50.0% | |
| CTTTCATGTTCGGGTGATGC+GGG | - | chr5.2:80563735-80563754 | None:intergenic | 50.0% | |
| GAAGAGGGTGATTATCCGTG+AGG | - | chr5.2:80564820-80564839 | None:intergenic | 50.0% | |
| GCAACACAACGGACAGACTT+AGG | + | chr5.2:80566975-80566994 | MS.gene81318:CDS | 50.0% | |
| GCGTGCACTGAAGGGATTTA+TGG | + | chr5.2:80562263-80562282 | MS.gene81318:intron | 50.0% | |
| GCTTTCATGTTCGGGTGATG+CGG | - | chr5.2:80563736-80563755 | None:intergenic | 50.0% | |
| GGATCATCATGTTCTCGTGG+AGG | - | chr5.2:80564941-80564960 | None:intergenic | 50.0% | |
| GGGACATCATCAATGACGAG+AGG | + | chr5.2:80565620-80565639 | MS.gene81318:CDS | 50.0% | |
| TCATCATGCCTGCCGATGTA+TGG | + | chr5.2:80563855-80563874 | MS.gene81318:CDS | 50.0% | |
| TTCGCCCGAGCTTTCTAGAT+CGG | - | chr5.2:80565198-80565217 | None:intergenic | 50.0% | |
| ! | AACGGGCTCTCATTGCAGTT+CGG | - | chr5.2:80565382-80565401 | None:intergenic | 50.0% |
| ! | ACACAGCCCTCCTCATTTTG+AGG | + | chr5.2:80566416-80566435 | MS.gene81318:intron | 50.0% |
| ! | CCTTGTTTGCGAGTTTGGAG+GGG | + | chr5.2:80566293-80566312 | MS.gene81318:intron | 50.0% |
| !! | AGCCTTGTTTGCGAGTTTGG+AGG | + | chr5.2:80566291-80566310 | MS.gene81318:intron | 50.0% |
| !! | GCCTTGTTTGCGAGTTTGGA+GGG | + | chr5.2:80566292-80566311 | MS.gene81318:intron | 50.0% |
| AGGGAAGGGAAGAGAGGCTT+TGG | - | chr5.2:80566631-80566650 | None:intergenic | 55.0% | |
| ATGCTCTGTTCGACTGGTGG+TGG | + | chr5.2:80561291-80561310 | MS.gene81318:intron | 55.0% | |
| CCCCTCCAAACTCGCAAACA+AGG | - | chr5.2:80566296-80566315 | None:intergenic | 55.0% | |
| CGAGTTTGGAGGGGAAGGAA+GGG | + | chr5.2:80566302-80566321 | MS.gene81318:intron | 55.0% | |
| GAGTTTGGAGGGGAAGGAAG+GGG | + | chr5.2:80566303-80566322 | MS.gene81318:intron | 55.0% | |
| GCTATGCTCTGTTCGACTGG+TGG | + | chr5.2:80561288-80561307 | MS.gene81318:intron | 55.0% | |
| GCTCTCATTGCAGTTCGGAC+TGG | - | chr5.2:80565377-80565396 | None:intergenic | 55.0% | |
| GGAAGGGAAGAGAGGCTTTG+GGG | - | chr5.2:80566629-80566648 | None:intergenic | 55.0% | |
| GGGAAGGGAAGAGAGGCTTT+GGG | - | chr5.2:80566630-80566649 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | + | chr5.2:80566297-80566316 | MS.gene81318:intron | 55.0% | |
| ! | CACCCTCTTCTAGCTGAGGT+AGG | + | chr5.2:80564830-80564849 | MS.gene81318:intron | 55.0% |
| ! | CTTCTGGTTGTATGGCTGCC+AGG | + | chr5.2:80564971-80564990 | MS.gene81318:CDS | 55.0% |
| ! | GAAGGGAAGAGAGGCTTTGG+GGG | - | chr5.2:80566628-80566647 | None:intergenic | 55.0% |
| GCGAGTTTGGAGGGGAAGGA+AGG | + | chr5.2:80566301-80566320 | MS.gene81318:intron | 60.0% | |
| TTGGAGGGGAAGGAAGGGGT+GGG | + | chr5.2:80566307-80566326 | MS.gene81318:intron | 60.0% | |
| TTTGGAGGGGAAGGAAGGGG+TGG | + | chr5.2:80566306-80566325 | MS.gene81318:intron | 60.0% | |
| !! | GGGAAGAGAGGCTTTGGGGG+TGG | - | chr5.2:80566625-80566644 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 80560838 | 80567018 | 80560838 | ID=MS.gene81318 |
| chr5.2 | mRNA | 80560838 | 80567018 | 80560838 | ID=MS.gene81318.t1;Parent=MS.gene81318 |
| chr5.2 | exon | 80560838 | 80561081 | 80560838 | ID=MS.gene81318.t1.exon1;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80560838 | 80561081 | 80560838 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80561539 | 80561629 | 80561539 | ID=MS.gene81318.t1.exon2;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80561539 | 80561629 | 80561539 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80561705 | 80562173 | 80561705 | ID=MS.gene81318.t1.exon3;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80561705 | 80562173 | 80561705 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80562264 | 80562343 | 80562264 | ID=MS.gene81318.t1.exon4;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80562264 | 80562343 | 80562264 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80562461 | 80562545 | 80562461 | ID=MS.gene81318.t1.exon5;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80562461 | 80562545 | 80562461 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80562652 | 80562743 | 80562652 | ID=MS.gene81318.t1.exon6;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80562652 | 80562743 | 80562652 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80562839 | 80562907 | 80562839 | ID=MS.gene81318.t1.exon7;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80562839 | 80562907 | 80562839 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80562989 | 80563025 | 80562989 | ID=MS.gene81318.t1.exon8;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80562989 | 80563025 | 80562989 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80563103 | 80563185 | 80563103 | ID=MS.gene81318.t1.exon9;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80563103 | 80563185 | 80563103 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80563563 | 80564006 | 80563563 | ID=MS.gene81318.t1.exon10;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80563563 | 80564006 | 80563563 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80564811 | 80564847 | 80564811 | ID=MS.gene81318.t1.exon11;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80564811 | 80564847 | 80564811 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80564935 | 80564992 | 80564935 | ID=MS.gene81318.t1.exon12;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80564935 | 80564992 | 80564935 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80565195 | 80565283 | 80565195 | ID=MS.gene81318.t1.exon13;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80565195 | 80565283 | 80565195 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80565371 | 80565436 | 80565371 | ID=MS.gene81318.t1.exon14;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80565371 | 80565436 | 80565371 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80565527 | 80565641 | 80565527 | ID=MS.gene81318.t1.exon15;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80565527 | 80565641 | 80565527 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80566784 | 80566822 | 80566784 | ID=MS.gene81318.t1.exon16;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80566784 | 80566822 | 80566784 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| chr5.2 | exon | 80566906 | 80567018 | 80566906 | ID=MS.gene81318.t1.exon17;Parent=MS.gene81318.t1 |
| chr5.2 | CDS | 80566906 | 80567018 | 80566906 | ID=cds.MS.gene81318.t1;Parent=MS.gene81318.t1 |
| Gene Sequence |
| Protein sequence |
