AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055909


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055909.t1 MTR_1g064240 98.546 619 9 0 1 619 1 619 0.0 1270
MS.gene055909.t1 MTR_4g058730 67.224 598 192 2 24 619 12 607 0.0 853
MS.gene055909.t1 MTR_2g094860 64.459 619 214 2 7 619 7 625 0.0 849
MS.gene055909.t1 MTR_2g460590 58.772 570 227 3 58 619 30 599 0.0 714
MS.gene055909.t1 MTR_3g109030 58.772 570 227 4 58 619 60 629 0.0 701
MS.gene055909.t1 MTR_4g130820 55.556 576 247 6 51 619 78 651 0.0 675
MS.gene055909.t1 MTR_7g034605 52.773 595 260 4 46 619 5 599 0.0 664
MS.gene055909.t1 MTR_3g091080 53.630 606 258 7 19 619 42 629 0.0 657
MS.gene055909.t1 MTR_3g088875 55.036 556 243 2 71 619 36 591 0.0 653
MS.gene055909.t1 MTR_1g028370 53.871 607 256 8 18 619 44 631 0.0 653
MS.gene055909.t1 MTR_7g117310 49.530 638 288 11 7 619 19 647 0.0 620
MS.gene055909.t1 MTR_7g117310 49.530 638 288 11 7 619 7 635 0.0 620
MS.gene055909.t1 MTR_7g117310 52.308 585 257 8 48 619 6 581 0.0 619
MS.gene055909.t1 MTR_8g027755 49.344 610 287 9 22 619 40 639 0.0 602
MS.gene055909.t1 MTR_8g464570 36.444 568 326 12 73 618 64 618 1.75e-112 352
MS.gene055909.t1 MTR_2g081110 36.063 574 338 13 61 618 54 614 7.91e-112 350
MS.gene055909.t1 MTR_6g075440 36.106 565 333 14 71 618 169 722 4.28e-108 343
MS.gene055909.t1 MTR_6g075440 36.106 565 333 14 71 618 169 722 7.26e-108 342
MS.gene055909.t1 MTR_5g007630 37.746 559 316 11 71 614 172 713 1.08e-107 341
MS.gene055909.t1 MTR_6g477760 36.088 593 350 10 47 619 99 682 9.51e-107 337
MS.gene055909.t1 MTR_6g075290 38.704 571 312 11 71 619 193 747 5.99e-106 337
MS.gene055909.t1 MTR_7g012260 36.348 564 337 10 71 618 109 666 2.90e-103 328
MS.gene055909.t1 MTR_6g075290 38.095 546 297 11 99 619 16 545 1.34e-95 304
MS.gene055909.t1 MTR_6g075290 38.033 539 297 10 101 618 183 705 5.87e-94 305
MS.gene055909.t1 MTR_6g075390 34.015 538 321 10 71 590 115 636 5.47e-87 285
MS.gene055909.t1 MTR_6g075410 31.646 553 347 12 71 606 98 636 5.75e-78 261
MS.gene055909.t1 MTR_6g076060 35.635 449 260 11 187 618 14 450 5.67e-68 230
MS.gene055909.t1 MTR_2g094810 62.385 109 41 0 149 257 12 120 6.36e-40 142
MS.gene055909.t1 MTR_6g075320 37.705 122 75 1 67 187 145 266 4.12e-23 100
MS.gene055909.t1 MTR_4g113530 21.605 486 282 16 70 545 45 441 3.19e-18 89.4
MS.gene055909.t1 MTR_2g006870 20.619 485 305 12 122 599 106 517 5.60e-16 82.4
MS.gene055909.t1 MTR_5g077770 26.257 179 129 2 342 520 282 457 3.68e-15 79.7
MS.gene055909.t1 MTR_3g108320 22.831 219 165 3 341 559 241 455 8.48e-14 74.7
MS.gene055909.t1 MTR_3g108320 22.831 219 165 3 341 559 241 455 8.80e-14 74.7
MS.gene055909.t1 MTR_3g108320 22.831 219 165 3 341 559 241 455 1.34e-13 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055909.t1 AT2G28260 65.635 614 208 1 6 619 6 616 0.0 855
MS.gene055909.t1 AT2G28260 69.014 568 176 0 52 619 9 576 0.0 847
MS.gene055909.t1 AT2G24610 55.466 622 262 7 8 618 8 625 0.0 692
MS.gene055909.t1 AT2G24610 55.484 620 261 7 10 618 25 640 0.0 690
MS.gene055909.t1 AT4G30360 57.374 556 230 3 71 619 71 626 0.0 682
MS.gene055909.t1 AT2G23980 53.654 602 267 7 29 619 59 659 0.0 676
MS.gene055909.t1 AT2G23980 53.654 602 267 7 29 619 59 659 0.0 676
MS.gene055909.t1 AT2G23980 53.654 602 267 7 29 619 32 632 0.0 676
MS.gene055909.t1 AT2G23980 53.654 602 267 7 29 619 59 659 0.0 676
MS.gene055909.t1 AT2G23980 53.654 602 267 7 29 619 59 659 0.0 676
MS.gene055909.t1 AT2G23980 53.654 602 267 7 29 619 59 659 0.0 676
MS.gene055909.t1 AT5G57940 55.882 578 245 6 51 619 67 643 0.0 673
MS.gene055909.t1 AT5G57940 55.882 578 245 6 51 619 67 643 0.0 673
MS.gene055909.t1 AT5G57940 55.882 578 245 6 51 619 60 636 0.0 673
MS.gene055909.t1 AT4G30560 53.465 606 273 6 23 619 53 658 0.0 669
MS.gene055909.t1 AT4G30560 53.465 606 273 6 23 619 27 632 0.0 669
MS.gene055909.t1 AT4G30560 53.465 606 273 6 23 619 27 632 0.0 669
MS.gene055909.t1 AT4G30560 53.465 606 273 6 23 619 27 632 0.0 669
MS.gene055909.t1 AT4G30560 53.465 606 273 6 23 619 53 658 0.0 669
MS.gene055909.t1 AT1G19780 56.076 576 240 7 55 619 80 653 0.0 668
MS.gene055909.t1 AT1G15990 53.731 603 260 8 34 619 47 647 0.0 664
MS.gene055909.t1 AT2G23980 51.840 625 266 8 29 619 59 682 0.0 663
MS.gene055909.t1 AT2G23980 51.840 625 266 8 29 619 59 682 0.0 663
MS.gene055909.t1 AT2G23980 51.840 625 266 8 29 619 59 682 0.0 663
MS.gene055909.t1 AT2G23980 51.840 625 266 8 29 619 59 682 0.0 663
MS.gene055909.t1 AT3G48010 54.374 583 250 6 47 619 26 602 0.0 654
MS.gene055909.t1 AT5G53130 55.235 554 237 5 71 619 84 631 0.0 651
MS.gene055909.t1 AT5G14870 52.793 555 256 2 71 619 40 594 0.0 640
MS.gene055909.t1 AT4G01010 53.425 584 267 4 40 619 37 619 0.0 639
MS.gene055909.t1 AT4G01010 53.425 584 267 4 40 619 37 619 0.0 639
MS.gene055909.t1 AT1G01340 51.560 609 263 8 35 619 18 618 0.0 637
MS.gene055909.t1 AT1G01340 51.560 609 263 8 35 619 13 613 0.0 637
MS.gene055909.t1 AT2G46430 51.971 558 250 7 71 619 72 620 0.0 588
MS.gene055909.t1 AT2G46430 51.971 558 250 7 71 619 72 620 0.0 588
MS.gene055909.t1 AT1G19780 58.465 443 173 5 186 619 2 442 0.0 535
MS.gene055909.t1 AT2G46440 46.055 545 281 7 82 619 40 578 1.29e-157 466
MS.gene055909.t1 AT2G46450 41.575 546 300 7 82 619 40 574 1.69e-146 439
MS.gene055909.t1 AT2G46450 41.575 546 300 7 82 619 40 574 1.69e-146 439
MS.gene055909.t1 AT2G46450 39.817 545 288 8 82 619 27 538 3.96e-134 406
MS.gene055909.t1 AT2G46450 39.817 545 288 8 82 619 40 551 6.02e-134 406
MS.gene055909.t1 AT2G46440 50.620 403 190 5 223 619 1 400 1.11e-124 375
MS.gene055909.t1 AT5G54250 35.866 566 340 10 71 618 79 639 1.40e-109 345
MS.gene055909.t1 AT5G54250 35.866 566 340 10 71 618 79 639 1.40e-109 345
MS.gene055909.t1 AT5G54250 35.866 566 340 10 71 618 79 639 1.40e-109 345
MS.gene055909.t1 AT3G17690 34.364 582 356 13 51 618 138 707 1.79e-108 343
MS.gene055909.t1 AT3G17700 36.598 582 342 14 52 618 173 742 1.36e-107 342
MS.gene055909.t1 AT5G15410 35.614 570 343 11 67 618 110 673 1.20e-104 333
MS.gene055909.t1 AT5G15410 35.614 570 343 11 67 618 111 674 1.92e-104 332
MS.gene055909.t1 AT5G54250 35.159 566 339 11 71 618 79 634 5.77e-104 330
MS.gene055909.t1 AT3G17690 33.925 507 318 9 51 552 138 632 1.22e-98 315
MS.gene055909.t1 AT3G17700 36.364 506 306 10 52 553 173 666 8.21e-98 313
MS.gene055909.t1 AT3G17690 32.031 384 251 7 51 429 138 516 2.20e-65 223
MS.gene055909.t1 AT3G02850 22.323 439 267 12 82 520 85 449 8.45e-18 87.8
MS.gene055909.t1 AT3G02850 22.779 439 265 12 82 520 85 449 2.91e-17 86.3
MS.gene055909.t1 AT3G02850 22.870 446 256 13 82 520 85 449 4.58e-17 85.9
MS.gene055909.t1 AT4G22200 19.484 426 273 8 121 545 107 463 3.34e-14 76.3
MS.gene055909.t1 AT4G22200 19.484 426 273 8 121 545 107 463 5.64e-14 75.9
MS.gene055909.t1 AT5G37500 25.543 184 134 2 342 525 257 437 6.77e-14 75.5
MS.gene055909.t1 AT5G37500 25.543 184 134 2 342 525 203 383 6.99e-14 75.5
MS.gene055909.t1 AT5G37500 25.543 184 134 2 342 525 257 437 1.20e-13 74.7
MS.gene055909.t1 AT5G37500 25.543 184 134 2 342 525 257 437 1.32e-13 74.7

Find 111 sgRNAs with CRISPR-Local

Find 195 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCCTTCATCTCGTGTTTC+TGG 0.112326 1.1:+48543786 MS.gene055909:CDS
ACATTATTCATATCTATATT+AGG 0.216780 1.1:+48543745 MS.gene055909:CDS
GCTGTGATTGTTGCAATTCT+TGG 0.224686 1.1:+48545242 MS.gene055909:CDS
CCAAGTATTATTATTGTCTT+TGG 0.233035 1.1:+48545055 MS.gene055909:CDS
TTAAGCCAAGCATTCCTATT+TGG 0.253153 1.1:-48544928 None:intergenic
CCTCAATAAGTACTGGAAAA+TGG 0.258411 1.1:-48544329 None:intergenic
GAGGACCTAGAATAAATTTA+TGG 0.262159 1.1:+48543571 MS.gene055909:CDS
TTACTTGTCTAACTAGATTA+AGG 0.272354 1.1:-48545788 None:intergenic
TTGTTCCATAAATTTATTCT+AGG 0.278851 1.1:-48543576 None:intergenic
TGATGAATTTGCAGCTCTTC+AGG 0.284395 1.1:+48545176 MS.gene055909:intron
AACAGTCACTTCTTTCAGTT+TGG 0.303420 1.1:+48544982 MS.gene055909:CDS
TGCATCAAACTACATGAAAA+AGG 0.316525 1.1:+48543842 MS.gene055909:CDS
CTTGTCTTTCAATTGATAAC+AGG 0.322976 1.1:-48544825 None:intergenic
AGCAGTCGGGCGAGGGTCTA+AGG 0.324635 1.1:-48546467 None:intergenic
GCTGTAATTCCAAATATAAA+AGG 0.326602 1.1:+48544265 MS.gene055909:CDS
GACAATCAAGATAATGATAT+TGG 0.332462 1.1:-48544891 None:intergenic
TATAATGCTAGGTACTCATT+TGG 0.340611 1.1:+48544242 MS.gene055909:intron
ACCTTCAATCGACCACTATA+CGG 0.343757 1.1:+48545574 MS.gene055909:CDS
GGTGGGGATTGAGGAATCTA+AGG 0.352167 1.1:+48545076 MS.gene055909:CDS
GAAGCTTAAGTGATCCAAAT+AGG 0.355960 1.1:+48544914 MS.gene055909:CDS
CTGCAACATGTGTACTTGTT+AGG 0.369323 1.1:-48545208 None:intergenic
TTGTTTGATTTCATTGTTTG+TGG 0.391370 1.1:+48543614 MS.gene055909:CDS
GACGCCATGACCAATTTAGA+TGG 0.405101 1.1:+48545682 MS.gene055909:CDS
TCGCGAACTATGCAAGTTCC+TGG 0.405890 1.1:-48546304 None:intergenic
TCAGTTGTTTGCTATGTAAC+CGG 0.409128 1.1:-48546588 None:intergenic
CATCATTACTCCACTTGCCT+TGG 0.413407 1.1:-48544386 None:intergenic
ATGTCACGTCTTAGATCAAC+AGG 0.421675 1.1:-48545750 None:intergenic
GTATTATTATTGTCTTTGGT+GGG 0.441309 1.1:+48545059 MS.gene055909:CDS
AAATTTATTCTAGGTCCTCT+AGG 0.441726 1.1:-48543567 None:intergenic
AGTCCTCTTCCATTTGATGA+TGG 0.444375 1.1:-48543492 None:intergenic
ATTGTCTTTGGTGGGGATTG+AGG 0.450681 1.1:+48545067 MS.gene055909:CDS
ACGACCAACGGTGGTAGAAC+TGG 0.455245 1.1:+48546382 MS.gene055909:CDS
GAGTAGCTACCCATCTAAAT+TGG 0.455345 1.1:-48545692 None:intergenic
CTTAAATCAAGCAATCTATC+AGG 0.455643 1.1:+48544946 MS.gene055909:CDS
AGTATTATTATTGTCTTTGG+TGG 0.455701 1.1:+48545058 MS.gene055909:CDS
GGAAACACAGCAGTCGGGCG+AGG 0.464302 1.1:-48546475 None:intergenic
TCATCTCGTGTTTCTGGTCG+AGG 0.464605 1.1:+48543792 MS.gene055909:CDS
GATTGTTGCAATTCTTGGAT+TGG 0.464760 1.1:+48545247 MS.gene055909:CDS
CTCACTGTGCGAGTTGATGA+AGG 0.471556 1.1:-48546496 None:intergenic
CAAGGCAAGTGGAGTAATGA+TGG 0.472612 1.1:+48544387 MS.gene055909:CDS
GTGATCCAAATAGGAATGCT+TGG 0.473435 1.1:+48544923 MS.gene055909:CDS
GTCGCCTGAGCTTATTCTGC+AGG 0.473910 1.1:-48546416 None:intergenic
ATAATGCTAGGTACTCATTT+GGG 0.476442 1.1:+48544243 MS.gene055909:intron
GTAGTTTGATGCAATCTTTG+AGG 0.478756 1.1:-48543832 None:intergenic
AAGTGTATTGATATGTCAAT+TGG 0.485639 1.1:+48543675 MS.gene055909:CDS
ATAAACAAGCCATCATCAAA+TGG 0.489789 1.1:+48543483 MS.gene055909:CDS
TTGAAAGACAAGATGAATGT+TGG 0.490493 1.1:+48544836 MS.gene055909:CDS
ATGAAGAGCATTTCGTCGAC+AGG 0.493141 1.1:-48546334 None:intergenic
GATACAACCTCAATAAGTAC+TGG 0.495573 1.1:-48544336 None:intergenic
TGCTACAAACTTTAAATCCT+CGG 0.498284 1.1:-48546554 None:intergenic
GCCGTATAGTGGTCGATTGA+AGG 0.500147 1.1:-48545575 None:intergenic
CTGTAATTCCAAATATAAAA+GGG 0.501630 1.1:+48544266 MS.gene055909:CDS
CCAAAGACAATAATAATACT+TGG 0.503297 1.1:-48545055 None:intergenic
CAGGAATATACCTGAGGAAG+TGG 0.505032 1.1:-48543894 None:intergenic
TCAGGTAACGAGGGAGCTGC+CGG 0.505935 1.1:-48545647 None:intergenic
GAAATGCTCTTCATCGTTCG+AGG 0.508603 1.1:+48546343 MS.gene055909:CDS
ATCAAGGCATGTAGTTCGCT+TGG 0.510564 1.1:+48544303 MS.gene055909:CDS
TCATCCATCTGATCAAATAG+TGG 0.519800 1.1:-48546232 None:intergenic
CAGAAAGATGGATGCATCAC+CGG 0.521281 1.1:+48545628 MS.gene055909:CDS
TTAGATTCTATTCACATCAG+TGG 0.525876 1.1:+48546620 MS.gene055909:CDS
CCACTCTTCCAGCCGTATAG+TGG 0.529262 1.1:-48545586 None:intergenic
TGCAGCACTACCACTTCCTC+AGG 0.529548 1.1:+48543884 MS.gene055909:CDS
ACTGGTAAGTAAAAGAAAAG+TGG 0.529988 1.1:-48543639 None:intergenic
TCAATCGACCACTATACGGC+TGG 0.530054 1.1:+48545578 MS.gene055909:CDS
TATTATTATTGTCTTTGGTG+GGG 0.530464 1.1:+48545060 MS.gene055909:CDS
ATTCACATCAGTGGAGGACA+TGG 0.530701 1.1:+48546629 MS.gene055909:CDS
TTGGTTATCTTAGATGATAG+AGG 0.537065 1.1:-48544367 None:intergenic
GGTACCACTATTTGATCAGA+TGG 0.540996 1.1:+48546228 MS.gene055909:intron
CTGTTATATCAAGAGTCGTA+AGG 0.542793 1.1:+48543101 MS.gene055909:CDS
GTTCCTGGAGTGCATAGAGT+TGG 0.542992 1.1:-48546289 None:intergenic
ATGAAGGAAACACAGCAGTC+GGG 0.545943 1.1:-48546480 None:intergenic
AATTTATTCTAGGTCCTCTA+GGG 0.546116 1.1:-48543566 None:intergenic
CGACCAGAAACACGAGATGA+AGG 0.546693 1.1:-48543789 None:intergenic
CCACTATACGGCTGGAAGAG+TGG 0.546695 1.1:+48545586 MS.gene055909:CDS
TATTTGATCAGATGGATGAC+AGG 0.547337 1.1:+48546236 MS.gene055909:CDS
GATGAAGGAAACACAGCAGT+CGG 0.548177 1.1:-48546481 None:intergenic
TTAGATTCTTGCACGACCAA+CGG 0.554372 1.1:+48546370 MS.gene055909:CDS
GAAGGACAGATACAGAAAGA+TGG 0.556176 1.1:+48545616 MS.gene055909:CDS
AAATGCTTCGACTTCTGTGA+TGG 0.558128 1.1:-48546521 None:intergenic
TGGAAGAGTGGCGAATAAGA+AGG 0.567637 1.1:+48545598 MS.gene055909:CDS
GTCTAACTAGATTAAGGCAA+AGG 0.567848 1.1:-48545782 None:intergenic
AACACCTGCAGAATAAGCTC+AGG 0.570561 1.1:+48546412 MS.gene055909:CDS
AAGCCATCATCAAATGGAAG+AGG 0.574296 1.1:+48543489 MS.gene055909:CDS
GAAACACAGCAGTCGGGCGA+GGG 0.579139 1.1:-48546474 None:intergenic
TTGTAGCAGCACAATTCCGC+CGG 0.583306 1.1:+48546569 MS.gene055909:CDS
CTACCCATCTAAATTGGTCA+TGG 0.585160 1.1:-48545686 None:intergenic
ACGCCATGACCAATTTAGAT+GGG 0.585828 1.1:+48545683 MS.gene055909:CDS
AAACCAACTCTATGCACTCC+AGG 0.588925 1.1:+48546286 MS.gene055909:CDS
GATTCTATTCACATCAGTGG+AGG 0.595512 1.1:+48546623 MS.gene055909:CDS
GGGCGAGGGTCTAAGGCCCA+TGG 0.598732 1.1:-48546460 None:intergenic
AAATGAGTGCATACGAGATG+AGG 0.599147 1.1:+48543433 MS.gene055909:CDS
AGCTACTCGTGGAGTTGACG+AGG 0.602552 1.1:+48545707 MS.gene055909:CDS
TGTTAGATGCAATATGTGAA+AGG 0.604722 1.1:+48546260 MS.gene055909:CDS
AGCATTTGCACTCATTGCCG+AGG 0.611919 1.1:+48546537 MS.gene055909:CDS
CTGATGTGAATAGAATCTAA+AGG 0.613822 1.1:-48546617 None:intergenic
TCTAAGATAACCAAGGCAAG+TGG 0.615553 1.1:+48544376 MS.gene055909:CDS
GCAGCTCCCTCGTTACCTGA+AGG 0.626636 1.1:+48545650 MS.gene055909:CDS
AGATAATGATATTGGCAATG+TGG 0.627476 1.1:-48544883 None:intergenic
TTTAGATGGGTAGCTACTCG+TGG 0.627869 1.1:+48545696 MS.gene055909:CDS
GGTCAGAAATGATTGCATCA+AGG 0.631571 1.1:+48544287 MS.gene055909:CDS
ATGAGGAGTGAATACAAGCA+TGG 0.634357 1.1:+48543450 MS.gene055909:CDS
ATAAGCTCAGGCGACTTCTG+CGG 0.636175 1.1:+48546424 MS.gene055909:CDS
TAACTAGATTAAGGCAAAGG+TGG 0.642852 1.1:-48545779 None:intergenic
GTTGTTTGCTATGTAACCGG+CGG 0.650163 1.1:-48546585 None:intergenic
AAAACCAGTTCTACCACCGT+TGG 0.651859 1.1:-48546386 None:intergenic
AGAAGGTGAAGAAAGTCACA+TGG 0.653076 1.1:+48543410 MS.gene055909:CDS
TTCACATCAGTGGAGGACAT+GGG 0.654472 1.1:+48546630 MS.gene055909:CDS
TCTATCATCTAAGATAACCA+AGG 0.655489 1.1:+48544369 MS.gene055909:CDS
TGAAGAGCATTTCGTCGACA+GGG 0.658976 1.1:-48546333 None:intergenic
GGAACTTGCATAGTTCGCGA+AGG 0.669380 1.1:+48546307 MS.gene055909:CDS
GATTCTTGCACGACCAACGG+TGG 0.711618 1.1:+48546373 MS.gene055909:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTAATTACAATGTTAAA+GGG - chr1.1:48543140-48543159 None:intergenic 10.0%
!!! TTTTTTTACAAAAATATGTT+TGG + chr1.1:48543324-48543343 MS.gene055909:intron 10.0%
!! AATAAGCTAAAAACAATTTA+TGG - chr1.1:48544624-48544643 None:intergenic 15.0%
!! ACATTATTCATATCTATATT+AGG + chr1.1:48543745-48543764 MS.gene055909:CDS 15.0%
!! CAATAAAAGAAATAATGTAA+CGG - chr1.1:48545546-48545565 None:intergenic 15.0%
!! CATATTAATTACAATGTTAA+AGG - chr1.1:48543141-48543160 None:intergenic 15.0%
!! GATAATTAAAAATGAATATC+AGG - chr1.1:48543916-48543935 None:intergenic 15.0%
!! TATGAAAATAAAACAACTTA+TGG + chr1.1:48545481-48545500 MS.gene055909:intron 15.0%
!! AAAAATTATGTGATTAAGAG+TGG - chr1.1:48546099-48546118 None:intergenic 20.0%
!! AGAATTGGTTAGAATAAATA+TGG - chr1.1:48545155-48545174 None:intergenic 20.0%
!! ATTCACTAATTTAGATTAGA+CGG + chr1.1:48545889-48545908 MS.gene055909:intron 20.0%
!! CTGTAATTCCAAATATAAAA+GGG + chr1.1:48544266-48544285 MS.gene055909:CDS 20.0%
!! GATAATTCATATATAATGCT+AGG + chr1.1:48544231-48544250 MS.gene055909:intron 20.0%
!! TTCTAAATCAGTAAAAATTG+TGG + chr1.1:48545964-48545983 MS.gene055909:intron 20.0%
!! TTGTTCCATAAATTTATTCT+AGG - chr1.1:48543579-48543598 None:intergenic 20.0%
!!! ACCTTTTCTTTATTTCAAAA+AGG + chr1.1:48544783-48544802 MS.gene055909:intron 20.0%
!!! ACCTTTTTGAAATAAAGAAA+AGG - chr1.1:48544787-48544806 None:intergenic 20.0%
!!! ATTAAGAATGAAGTACTAAT+TGG + chr1.1:48546191-48546210 MS.gene055909:intron 20.0%
!!! CTTTATTTCAAAAAGGTTTT+AGG + chr1.1:48544790-48544809 MS.gene055909:intron 20.0%
!!! GTATTACGAAAAACATTTTT+CGG - chr1.1:48544482-48544501 None:intergenic 20.0%
!!! TATTTTAATTATGCGAAGAA+CGG - chr1.1:48544176-48544195 None:intergenic 20.0%
! AGTATTATTATTGTCTTTGG+TGG + chr1.1:48545058-48545077 MS.gene055909:CDS 25.0%
! ATATTCCAGAAATTCATTCA+TGG + chr1.1:48545999-48546018 MS.gene055909:intron 25.0%
! CCAAAGACAATAATAATACT+TGG - chr1.1:48545058-48545077 None:intergenic 25.0%
! CCAAGTATTATTATTGTCTT+TGG + chr1.1:48545055-48545074 MS.gene055909:CDS 25.0%
! GAAAAAGAGAAATTACAAGA+AGG + chr1.1:48543393-48543412 MS.gene055909:CDS 25.0%
! GACAATCAAGATAATGATAT+TGG - chr1.1:48544894-48544913 None:intergenic 25.0%
! GCTGTAATTCCAAATATAAA+AGG + chr1.1:48544265-48544284 MS.gene055909:CDS 25.0%
! GTATTATTATTGTCTTTGGT+GGG + chr1.1:48545059-48545078 MS.gene055909:CDS 25.0%
! TATGTTTAAATGTTCTGTGT+TGG + chr1.1:48544111-48544130 MS.gene055909:intron 25.0%
! TATTATTATTGTCTTTGGTG+GGG + chr1.1:48545060-48545079 MS.gene055909:CDS 25.0%
! TTACTTGTCTAACTAGATTA+AGG - chr1.1:48545791-48545810 None:intergenic 25.0%
!! AAGTGTATTGATATGTCAAT+TGG + chr1.1:48543675-48543694 MS.gene055909:CDS 25.0%
!! ACTACATGAAAAAGGAATTT+TGG + chr1.1:48543850-48543869 MS.gene055909:CDS 25.0%
!! ATTTCTGACCCTTTTATATT+TGG - chr1.1:48544277-48544296 None:intergenic 25.0%
!! GCTTTTTATTACACAGATTA+TGG + chr1.1:48545845-48545864 MS.gene055909:intron 25.0%
!! TTGTTTGATTTCATTGTTTG+TGG + chr1.1:48543614-48543633 MS.gene055909:CDS 25.0%
!!! AATTTTATGGTTTGCAAACA+TGG + chr1.1:48544198-48544217 MS.gene055909:intron 25.0%
AAATTTATTCTAGGTCCTCT+AGG - chr1.1:48543570-48543589 None:intergenic 30.0%
AAGCTATCCTATAGAACTTA+CGG - chr1.1:48544648-48544667 None:intergenic 30.0%
AATTTATTCTAGGTCCTCTA+GGG - chr1.1:48543569-48543588 None:intergenic 30.0%
ACTGGTAAGTAAAAGAAAAG+TGG - chr1.1:48543642-48543661 None:intergenic 30.0%
AGATAATGATATTGGCAATG+TGG - chr1.1:48544886-48544905 None:intergenic 30.0%
ATAAACAAGCCATCATCAAA+TGG + chr1.1:48543483-48543502 MS.gene055909:CDS 30.0%
ATAATGCTAGGTACTCATTT+GGG + chr1.1:48544243-48544262 MS.gene055909:intron 30.0%
CTGATGTGAATAGAATCTAA+AGG - chr1.1:48546620-48546639 None:intergenic 30.0%
CTGCAAATTCATCATAGAAT+TGG - chr1.1:48545170-48545189 None:intergenic 30.0%
CTTAAATCAAGCAATCTATC+AGG + chr1.1:48544946-48544965 MS.gene055909:CDS 30.0%
CTTATTTCCGTAAGTTCTAT+AGG + chr1.1:48544638-48544657 MS.gene055909:intron 30.0%
GAGGACCTAGAATAAATTTA+TGG + chr1.1:48543571-48543590 MS.gene055909:CDS 30.0%
TAAGAAATGAATCAGAAGCA+AGG - chr1.1:48544763-48544782 None:intergenic 30.0%
TATAATGCTAGGTACTCATT+TGG + chr1.1:48544242-48544261 MS.gene055909:intron 30.0%
TGCATCAAACTACATGAAAA+AGG + chr1.1:48543842-48543861 MS.gene055909:CDS 30.0%
TGCTACAAACTTTAAATCCT+CGG - chr1.1:48546557-48546576 None:intergenic 30.0%
TGTTAGATGCAATATGTGAA+AGG + chr1.1:48546260-48546279 MS.gene055909:CDS 30.0%
TTAGATTCTATTCACATCAG+TGG + chr1.1:48546620-48546639 MS.gene055909:CDS 30.0%
TTGAAAGACAAGATGAATGT+TGG + chr1.1:48544836-48544855 MS.gene055909:CDS 30.0%
TTGGTTATCTTAGATGATAG+AGG - chr1.1:48544370-48544389 None:intergenic 30.0%
! AGTAATGATGGAAAAAGCTT+GGG + chr1.1:48544399-48544418 MS.gene055909:CDS 30.0%
! CTTGTCTTTCAATTGATAAC+AGG - chr1.1:48544828-48544847 None:intergenic 30.0%
! TCTATCATCTAAGATAACCA+AGG + chr1.1:48544369-48544388 MS.gene055909:CDS 30.0%
! TTTTTATGATGCTGTGACTT+TGG + chr1.1:48545008-48545027 MS.gene055909:CDS 30.0%
!! AAAAAAAAGTGTCACACACA+TGG - chr1.1:48546131-48546150 None:intergenic 30.0%
!!! AAAAGGTTTTAGGATCAACT+TGG + chr1.1:48544800-48544819 MS.gene055909:intron 30.0%
AAATAATGTAACGGCGTGTT+TGG - chr1.1:48545537-48545556 None:intergenic 35.0%
AACAGTCACTTCTTTCAGTT+TGG + chr1.1:48544982-48545001 MS.gene055909:CDS 35.0%
AACGGCTAATACATTCTTTC+AGG - chr1.1:48544158-48544177 None:intergenic 35.0%
AATAATGTAACGGCGTGTTT+GGG - chr1.1:48545536-48545555 None:intergenic 35.0%
AGCAGGAGATACATATATCA+CGG - chr1.1:48545350-48545369 None:intergenic 35.0%
AGCATTTGTGATACTGTTTG+AGG + chr1.1:48544544-48544563 MS.gene055909:intron 35.0%
AGTAAACCGTTTATCTAAGC+AGG - chr1.1:48545367-48545386 None:intergenic 35.0%
AGTTCTATCTAGTAGGTCTA+AGG + chr1.1:48543276-48543295 MS.gene055909:intron 35.0%
ATAAATCACTTCATCCTCCA+AGG + chr1.1:48543939-48543958 MS.gene055909:intron 35.0%
ATGTATCAACTCATACCACT+AGG - chr1.1:48543250-48543269 None:intergenic 35.0%
CAATGAATTGTTAGCCATGT+AGG - chr1.1:48544038-48544057 None:intergenic 35.0%
CGTAATACTTGCGATCAAAA+TGG + chr1.1:48544494-48544513 MS.gene055909:intron 35.0%
CTGTTATATCAAGAGTCGTA+AGG + chr1.1:48543101-48543120 MS.gene055909:CDS 35.0%
CTTGACCATGAATGAATTTC+TGG - chr1.1:48546007-48546026 None:intergenic 35.0%
GAAGCTTAAGTGATCCAAAT+AGG + chr1.1:48544914-48544933 MS.gene055909:CDS 35.0%
GAATATCAGGAATATACCTG+AGG - chr1.1:48543903-48543922 None:intergenic 35.0%
GATACAACCTCAATAAGTAC+TGG - chr1.1:48544339-48544358 None:intergenic 35.0%
GATTGTTGCAATTCTTGGAT+TGG + chr1.1:48545247-48545266 MS.gene055909:CDS 35.0%
GTAGTTTGATGCAATCTTTG+AGG - chr1.1:48543835-48543854 None:intergenic 35.0%
GTATCTCCTGCTTAGATAAA+CGG + chr1.1:48545358-48545377 MS.gene055909:intron 35.0%
GTCTAACTAGATTAAGGCAA+AGG - chr1.1:48545785-48545804 None:intergenic 35.0%
TAAATCACTTCATCCTCCAA+GGG + chr1.1:48543940-48543959 MS.gene055909:intron 35.0%
TAACTAGATTAAGGCAAAGG+TGG - chr1.1:48545782-48545801 None:intergenic 35.0%
TAATTGGACACTAATTGCAC+AGG + chr1.1:48546207-48546226 MS.gene055909:intron 35.0%
TATTTGATCAGATGGATGAC+AGG + chr1.1:48546236-48546255 MS.gene055909:CDS 35.0%
TATTTGCACGTAAAGTAGAG+CGG - chr1.1:48545934-48545953 None:intergenic 35.0%
TCATCCATCTGATCAAATAG+TGG - chr1.1:48546235-48546254 None:intergenic 35.0%
TCGAATGAGTTCTATCTAGT+AGG + chr1.1:48543269-48543288 MS.gene055909:intron 35.0%
TTAAGCCAAGCATTCCTATT+TGG - chr1.1:48544931-48544950 None:intergenic 35.0%
! CACTTTTCTTTCTTAGCAAC+TGG - chr1.1:48543660-48543679 None:intergenic 35.0%
! CCATTTTCCAGTACTTATTG+AGG + chr1.1:48544329-48544348 MS.gene055909:CDS 35.0%
! GAGTAATGATGGAAAAAGCT+TGG + chr1.1:48544398-48544417 MS.gene055909:CDS 35.0%
! TTCAGTGTTATTGTGAACTC+AGG + chr1.1:48543355-48543374 MS.gene055909:intron 35.0%
!! AATGTTCTGTGTTGGTTTGT+AGG + chr1.1:48544119-48544138 MS.gene055909:intron 35.0%
!! ATGTTCTGTGTTGGTTTGTA+GGG + chr1.1:48544120-48544139 MS.gene055909:intron 35.0%
!! ATTTTAGTATTCGACCCTAG+AGG + chr1.1:48543552-48543571 MS.gene055909:CDS 35.0%
!! CCTCAATAAGTACTGGAAAA+TGG - chr1.1:48544332-48544351 None:intergenic 35.0%
!! TCAGTTGTTTGCTATGTAAC+CGG - chr1.1:48546591-48546610 None:intergenic 35.0%
!! TTTTCTGAAGATTATGACGC+AGG + chr1.1:48543525-48543544 MS.gene055909:CDS 35.0%
AAATGAGTGCATACGAGATG+AGG + chr1.1:48543433-48543452 MS.gene055909:CDS 40.0%
AAATGCTTCGACTTCTGTGA+TGG - chr1.1:48546524-48546543 None:intergenic 40.0%
AAGCCATCATCAAATGGAAG+AGG + chr1.1:48543489-48543508 MS.gene055909:CDS 40.0%
ACCTTCAATCGACCACTATA+CGG + chr1.1:48545574-48545593 MS.gene055909:CDS 40.0%
ACGCCATGACCAATTTAGAT+GGG + chr1.1:48545683-48545702 MS.gene055909:CDS 40.0%
AGAAGGTGAAGAAAGTCACA+TGG + chr1.1:48543410-48543429 MS.gene055909:CDS 40.0%
AGTCCTCTTCCATTTGATGA+TGG - chr1.1:48543495-48543514 None:intergenic 40.0%
ATACCACTAGGCTACTTCTT+CGG - chr1.1:48543238-48543257 None:intergenic 40.0%
ATGAGGAGTGAATACAAGCA+TGG + chr1.1:48543450-48543469 MS.gene055909:CDS 40.0%
ATGTCACGTCTTAGATCAAC+AGG - chr1.1:48545753-48545772 None:intergenic 40.0%
ATGTCGCAATAATGCCTACA+TGG + chr1.1:48544021-48544040 MS.gene055909:intron 40.0%
CAGCTTAAGCTATACTAGAG+AGG + chr1.1:48545457-48545476 MS.gene055909:intron 40.0%
CTACCCATCTAAATTGGTCA+TGG - chr1.1:48545689-48545708 None:intergenic 40.0%
CTGCAACATGTGTACTTGTT+AGG - chr1.1:48545211-48545230 None:intergenic 40.0%
GAAGGACAGATACAGAAAGA+TGG + chr1.1:48545616-48545635 MS.gene055909:CDS 40.0%
GACCAAAATTGAGATCGCAT+TGG - chr1.1:48546035-48546054 None:intergenic 40.0%
GAGTAGCTACCCATCTAAAT+TGG - chr1.1:48545695-48545714 None:intergenic 40.0%
GATTCTATTCACATCAGTGG+AGG + chr1.1:48546623-48546642 MS.gene055909:CDS 40.0%
GCTGTGATTGTTGCAATTCT+TGG + chr1.1:48545242-48545261 MS.gene055909:CDS 40.0%
GGCATTATTGCGACATTCTT+TGG - chr1.1:48544017-48544036 None:intergenic 40.0%
GGTACCACTATTTGATCAGA+TGG + chr1.1:48546228-48546247 MS.gene055909:intron 40.0%
GGTCAGAAATGATTGCATCA+AGG + chr1.1:48544287-48544306 MS.gene055909:CDS 40.0%
GTGATCCAAATAGGAATGCT+TGG + chr1.1:48544923-48544942 MS.gene055909:CDS 40.0%
TGATGAATTTGCAGCTCTTC+AGG + chr1.1:48545176-48545195 MS.gene055909:intron 40.0%
TTAGATTAGACGGATCTGCT+GGG + chr1.1:48545899-48545918 MS.gene055909:intron 40.0%
TTAGATTCTTGCACGACCAA+CGG + chr1.1:48546370-48546389 MS.gene055909:CDS 40.0%
TTATTGCGACATTCTTTGGC+TGG - chr1.1:48544013-48544032 None:intergenic 40.0%
TTGTACTCGCTCACACTTTA+CGG - chr1.1:48544089-48544108 None:intergenic 40.0%
TTTAGATTAGACGGATCTGC+TGG + chr1.1:48545898-48545917 MS.gene055909:intron 40.0%
! ACATTTTCCTTCAGGTAACG+AGG - chr1.1:48545660-48545679 None:intergenic 40.0%
! CATTTTCCTTCAGGTAACGA+GGG - chr1.1:48545659-48545678 None:intergenic 40.0%
! GACCAATGCGATCTCAATTT+TGG + chr1.1:48546030-48546049 MS.gene055909:intron 40.0%
! TCTAAGATAACCAAGGCAAG+TGG + chr1.1:48544376-48544395 MS.gene055909:CDS 40.0%
AAAACCAGTTCTACCACCGT+TGG - chr1.1:48546389-48546408 None:intergenic 45.0%
AAACCAACTCTATGCACTCC+AGG + chr1.1:48546286-48546305 MS.gene055909:CDS 45.0%
AACACCTGCAGAATAAGCTC+AGG + chr1.1:48546412-48546431 MS.gene055909:CDS 45.0%
ACTTATGTGAGCGTACGTAC+TGG + chr1.1:48544517-48544536 MS.gene055909:intron 45.0%
ATCAAGGCATGTAGTTCGCT+TGG + chr1.1:48544303-48544322 MS.gene055909:CDS 45.0%
ATGAAGGAAACACAGCAGTC+GGG - chr1.1:48546483-48546502 None:intergenic 45.0%
ATTCACATCAGTGGAGGACA+TGG + chr1.1:48546629-48546648 MS.gene055909:CDS 45.0%
ATTGTCTTTGGTGGGGATTG+AGG + chr1.1:48545067-48545086 MS.gene055909:CDS 45.0%
CAAGGCAAGTGGAGTAATGA+TGG + chr1.1:48544387-48544406 MS.gene055909:CDS 45.0%
CAGAAAGATGGATGCATCAC+CGG + chr1.1:48545628-48545647 MS.gene055909:CDS 45.0%
CAGGAATATACCTGAGGAAG+TGG - chr1.1:48543897-48543916 None:intergenic 45.0%
CATCATTACTCCACTTGCCT+TGG - chr1.1:48544389-48544408 None:intergenic 45.0%
GAAATGCTCTTCATCGTTCG+AGG + chr1.1:48546343-48546362 MS.gene055909:CDS 45.0%
GACGCCATGACCAATTTAGA+TGG + chr1.1:48545682-48545701 MS.gene055909:CDS 45.0%
GATGAAGGAAACACAGCAGT+CGG - chr1.1:48546484-48546503 None:intergenic 45.0%
TACCACTAGGCTACTTCTTC+GGG - chr1.1:48543237-48543256 None:intergenic 45.0%
TGGAAGAGTGGCGAATAAGA+AGG + chr1.1:48545598-48545617 MS.gene055909:CDS 45.0%
TGTACTCGCTCACACTTTAC+GGG - chr1.1:48544088-48544107 None:intergenic 45.0%
TTCACATCAGTGGAGGACAT+GGG + chr1.1:48546630-48546649 MS.gene055909:CDS 45.0%
TTTAGATGGGTAGCTACTCG+TGG + chr1.1:48545696-48545715 MS.gene055909:CDS 45.0%
! ATGATGGAAAAAGCTTGGGC+TGG + chr1.1:48544403-48544422 MS.gene055909:CDS 45.0%
! CGGTGAAGAGCTTTTACCAT+GGG + chr1.1:48546444-48546463 MS.gene055909:CDS 45.0%
!! ATGAAGAGCATTTCGTCGAC+AGG - chr1.1:48546337-48546356 None:intergenic 45.0%
!! GTGCTTTTTGCACTGCTCAT+AGG + chr1.1:48545269-48545288 MS.gene055909:CDS 45.0%
!! GTTGTTTGCTATGTAACCGG+CGG - chr1.1:48546588-48546607 None:intergenic 45.0%
!! TGAAGAGCATTTCGTCGACA+GGG - chr1.1:48546336-48546355 None:intergenic 45.0%
!!! TAATTAAAATATGAATTTTA+TGG + chr1.1:48544185-48544204 MS.gene055909:intron 5.0%
ACATGTGATGAAGCCCTTGG+AGG - chr1.1:48543956-48543975 None:intergenic 50.0%
ACCACATGTGATGAAGCCCT+TGG - chr1.1:48543959-48543978 None:intergenic 50.0%
AGCATTTGCACTCATTGCCG+AGG + chr1.1:48546537-48546556 MS.gene055909:CDS 50.0%
ATAAGCTCAGGCGACTTCTG+CGG + chr1.1:48546424-48546443 MS.gene055909:CDS 50.0%
ATCCCGAAGAAGTAGCCTAG+TGG + chr1.1:48543232-48543251 MS.gene055909:intron 50.0%
CGACCAGAAACACGAGATGA+AGG - chr1.1:48543792-48543811 None:intergenic 50.0%
GCCGTATAGTGGTCGATTGA+AGG - chr1.1:48545578-48545597 None:intergenic 50.0%
GCTCCTTCATCTCGTGTTTC+TGG + chr1.1:48543786-48543805 MS.gene055909:CDS 50.0%
GGAACTTGCATAGTTCGCGA+AGG + chr1.1:48546307-48546326 MS.gene055909:CDS 50.0%
GGTGGGGATTGAGGAATCTA+AGG + chr1.1:48545076-48545095 MS.gene055909:CDS 50.0%
GTTCCTGGAGTGCATAGAGT+TGG - chr1.1:48546292-48546311 None:intergenic 50.0%
TCAATCGACCACTATACGGC+TGG + chr1.1:48545578-48545597 MS.gene055909:CDS 50.0%
TCCAAGGGCTTCATCACATG+TGG + chr1.1:48543955-48543974 MS.gene055909:intron 50.0%
TCGCGAACTATGCAAGTTCC+TGG - chr1.1:48546307-48546326 None:intergenic 50.0%
TTGTAGCAGCACAATTCCGC+CGG + chr1.1:48546569-48546588 MS.gene055909:CDS 50.0%
! GCGGTGAAGAGCTTTTACCA+TGG + chr1.1:48546443-48546462 MS.gene055909:CDS 50.0%
!! CTCACTGTGCGAGTTGATGA+AGG - chr1.1:48546499-48546518 None:intergenic 50.0%
!! GGCGTCGAACATTTTCCTTC+AGG - chr1.1:48545668-48545687 None:intergenic 50.0%
!! TCATCTCGTGTTTCTGGTCG+AGG + chr1.1:48543792-48543811 MS.gene055909:CDS 50.0%
ACGACCAACGGTGGTAGAAC+TGG + chr1.1:48546382-48546401 MS.gene055909:CDS 55.0%
AGCTACTCGTGGAGTTGACG+AGG + chr1.1:48545707-48545726 MS.gene055909:CDS 55.0%
CCACTATACGGCTGGAAGAG+TGG + chr1.1:48545586-48545605 MS.gene055909:CDS 55.0%
CCACTCTTCCAGCCGTATAG+TGG - chr1.1:48545589-48545608 None:intergenic 55.0%
GATTCTTGCACGACCAACGG+TGG + chr1.1:48546373-48546392 MS.gene055909:CDS 55.0%
GTCGCCTGAGCTTATTCTGC+AGG - chr1.1:48546419-48546438 None:intergenic 55.0%
TGCAGCACTACCACTTCCTC+AGG + chr1.1:48543884-48543903 MS.gene055909:CDS 55.0%
GAAACACAGCAGTCGGGCGA+GGG - chr1.1:48546477-48546496 None:intergenic 60.0%
GCAGCTCCCTCGTTACCTGA+AGG + chr1.1:48545650-48545669 MS.gene055909:CDS 60.0%
TCAGGTAACGAGGGAGCTGC+CGG - chr1.1:48545650-48545669 None:intergenic 60.0%
AGCAGTCGGGCGAGGGTCTA+AGG - chr1.1:48546470-48546489 None:intergenic 65.0%
GGAAACACAGCAGTCGGGCG+AGG - chr1.1:48546478-48546497 None:intergenic 65.0%
! GGGCGAGGGTCTAAGGCCCA+TGG - chr1.1:48546463-48546482 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 48543094 48546672 48543094 ID=MS.gene055909
chr1.1 mRNA 48543094 48546672 48543094 ID=MS.gene055909.t1;Parent=MS.gene055909
chr1.1 exon 48543094 48543122 48543094 ID=MS.gene055909.t1.exon1;Parent=MS.gene055909.t1
chr1.1 CDS 48543094 48543122 48543094 ID=cds.MS.gene055909.t1;Parent=MS.gene055909.t1
chr1.1 exon 48543377 48543905 48543377 ID=MS.gene055909.t1.exon2;Parent=MS.gene055909.t1
chr1.1 CDS 48543377 48543905 48543377 ID=cds.MS.gene055909.t1;Parent=MS.gene055909.t1
chr1.1 exon 48544253 48544465 48544253 ID=MS.gene055909.t1.exon3;Parent=MS.gene055909.t1
chr1.1 CDS 48544253 48544465 48544253 ID=cds.MS.gene055909.t1;Parent=MS.gene055909.t1
chr1.1 exon 48544805 48545097 48544805 ID=MS.gene055909.t1.exon4;Parent=MS.gene055909.t1
chr1.1 CDS 48544805 48545097 48544805 ID=cds.MS.gene055909.t1;Parent=MS.gene055909.t1
chr1.1 exon 48545190 48545301 48545190 ID=MS.gene055909.t1.exon5;Parent=MS.gene055909.t1
chr1.1 CDS 48545190 48545301 48545190 ID=cds.MS.gene055909.t1;Parent=MS.gene055909.t1
chr1.1 exon 48545570 48545806 48545570 ID=MS.gene055909.t1.exon6;Parent=MS.gene055909.t1
chr1.1 CDS 48545570 48545806 48545570 ID=cds.MS.gene055909.t1;Parent=MS.gene055909.t1
chr1.1 exon 48546229 48546672 48546229 ID=MS.gene055909.t1.exon7;Parent=MS.gene055909.t1
chr1.1 CDS 48546229 48546672 48546229 ID=cds.MS.gene055909.t1;Parent=MS.gene055909.t1
Gene Sequence

>MS.gene055909

ATGGCTTCTGTTATATCAAGAGTCGTAAGGTTTGCATAATCTTCCCTTTAACATTGTAATTAATATGACTTATCAACTTAAGAAATTATATTTCTATTGTACTATATCGTTATTTTCAACTTCGTTTATTTATTTCTAATCCCGAAGAAGTAGCCTAGTGGTATGAGTTGATACATCGAATGAGTTCTATCTAGTAGGTCTAAGGTTTGATCGTTACTACTAACAATTTCTTTTTTTACAAAAATATGTTTGGTGCTAAAATTCAGTGTTATTGTGAACTCAGGTTTCATGATGATCTTGAAAAAGAGAAATTACAAGAAGGTGAAGAAAGTCACATGGAAATGAGTGCATACGAGATGAGGAGTGAATACAAGCATGGAAAAGATGCAATAAACAAGCCATCATCAAATGGAAGAGGACTTTCAAGAGTTTTTTCTGAAGATTATGACGCAGGAGAGATTTTAGTATTCGACCCTAGAGGACCTAGAATAAATTTATGGAACAAAATATTCTTAGCAGCTTGTTTGATTTCATTGTTTGTGGATCCACTTTTCTTTTACTTACCAGTTGCTAAGAAAGAAAAGTGTATTGATATGTCAATTGGTCTTGAAGTTTCACTTACTATAATTAGAACATTTGTTGATGCATTTTACATTATTCATATCTATATTAGGTTTCAAACTGCTTATATTGCTCCTTCATCTCGTGTTTCTGGTCGAGGAGAACTCATTATTGATTCCTCAAAGATTGCATCAAACTACATGAAAAAGGAATTTTGGTCTGATCTTGTTGCAGCACTACCACTTCCTCAGGTATATTCCTGATATTCATTTTTAATTATCAGTATAAATCACTTCATCCTCCAAGGGCTTCATCACATGTGGTTTTCTACACTTCTATCTTTACTTATAGTAAACCAGCCAAAGAATGTCGCAATAATGCCTACATGGCTAACAATTCATTGAAGAAATAGTGAAAATGTTTTAAAACTCCCGTAAAGTGTGAGCGAGTACAAAATATGTTTAAATGTTCTGTGTTGGTTTGTAGGGACAGTCACAAATCCTGAAAGAATGTATTAGCCGTTCTTCGCATAATTAAAATATGAATTTTATGGTTTGCAAACATGGCTAACAATTTGATAATTCATATATAATGCTAGGTACTCATTTGGGCTGTAATTCCAAATATAAAAGGGTCAGAAATGATTGCATCAAGGCATGTAGTTCGCTTGGTGTCCATTTTCCAGTACTTATTGAGGTTGTATCTTATTTATCCTCTATCATCTAAGATAACCAAGGCAAGTGGAGTAATGATGGAAAAAGCTTGGGCTGGTGCAGCTTATTATTTAACACTCTATATGCTTGCAAGTCATGTAAGTCACTCTTCCGAAAAATGTTTTTCGTAATACTTGCGATCAAAATGGACTTATGTGAGCGTACGTACTGGTATGAGCATTTGTGATACTGTTTGAGGTAACTTATTTTAACATAAGTATTTTTGCAGACTTTATAAAAACTTATAACATGTCCATAAATTGTTTTTAGCTTATTTCCGTAAGTTCTATAGGATAGCTTATGAAAACAGCTTAGAATTAGATGAAAACAATTTGATTTTAATAGTGTATACATAATCACTTAGATGATACACGCTTATGCTATACGCACTTCCTTGCTTCTGATTCATTTCTTAACCTTTTCTTTATTTCAAAAAGGTTTTAGGATCAACTTGGTACCTGTTATCAATTGAAAGACAAGATGAATGTTGGAAGAAAGCATGTACACTTCAATATCCACATTGCCAATATCATTATCTTGATTGTCGAAGCTTAAGTGATCCAAATAGGAATGCTTGGCTTAAATCAAGCAATCTATCAGGTCTATGTGATCAGAACAGTCACTTCTTTCAGTTTGGAATTTTTTATGATGCTGTGACTTTGGAAATAACTAGCTCAAACTTCTTAACCAAGTATTATTATTGTCTTTGGTGGGGATTGAGGAATCTAAGGTAACTCAAATTTTCGATGAAAAGTTTGATAATTTCTTGAAGTAAAAGTTTTGTCCATATTTATTCTAACCAATTCTATGATGAATTTGCAGCTCTTCAGGAGAGAATCTCCTAACAAGTACACATGTTGCAGAGATAAATTTTGCTGTGATTGTTGCAATTCTTGGATTGGTGCTTTTTGCACTGCTCATAGGAAATATGCAAGTATGTACAGCGATTATCAGTTTATTAATGTGTCATGATCGTTTTCCGTGATATATGTATCTCCTGCTTAGATAAACGGTTTACTTAAATGTTTATTGAATAAATATTAATCATATAAGTGCTTGCATAAGCAATTTCTACAACAAAAGATAAAGCAGCTTAAGCTATACTAGAGAGGTTATGAAAATAAAACAACTTATGGACATGTCACAAACTGCTTTCATAAGCTCTCCCAAACACGCCGTTACATTATTTCTTTTATTGACAGACGTACCTTCAATCGACCACTATACGGCTGGAAGAGTGGCGAATAAGAAGGACAGATACAGAAAGATGGATGCATCACCGGCAGCTCCCTCGTTACCTGAAGGAAAATGTTCGACGCCATGACCAATTTAGATGGGTAGCTACTCGTGGAGTTGACGAGGAAGCAATTCTTAGAGATCTTCCTGTTGATCTAAGACGTGACATTAAACGCCACCTTTGCCTTAATCTAGTTAGACAAGTAAGTAAATCTTTGTTTTCATCTCTGCATCTGTATTTGCTTTTTATTACACAGATTATGGATTAAACGACTTAGATTACACATTCACTAATTTAGATTAGACGGATCTGCTGGGAATCTGTTTCCGCTCTACTTTACGTGCAAATAAGATTTTAACTTCTAAATCAGTAAAAATTGTGGTCTCAATCACTGATATTCCAGAAATTCATTCATGGTCAAGTTTGACCAATGCGATCTCAATTTTGGTCGCATAAATGTGATCATTGATAAATAAAAAATCTTGATGTCTCCACTCTTAATCACATAATTTTTCTTAAGAAACCATGTGTGTGACACTTTTTTTTCTTTTTTTGTTGATATGTTGCTTGAGAAACAAGTAAACAAATTAAGAATGAAGTACTAATTGGACACTAATTGCACAGGTACCACTATTTGATCAGATGGATGACAGGATGTTAGATGCAATATGTGAAAGGCTAAAACCAACTCTATGCACTCCAGGAACTTGCATAGTTCGCGAAGGCGACCCTGTCGACGAAATGCTCTTCATCGTTCGAGGACGTTTAGATTCTTGCACGACCAACGGTGGTAGAACTGGTTTTTTCAACACCTGCAGAATAAGCTCAGGCGACTTCTGCGGTGAAGAGCTTTTACCATGGGCCTTAGACCCTCGCCCGACTGCTGTGTTTCCTTCATCAACTCGCACAGTGAGAGCCATCACAGAAGTCGAAGCATTTGCACTCATTGCCGAGGATTTAAAGTTTGTAGCAGCACAATTCCGCCGGTTACATAGCAAACAACTGAGACAAACCTTTAGATTCTATTCACATCAGTGGAGGACATGGGCTGCATGTTTTATACAAGCA

Protein sequence

>MS.gene055909.t1

MASVISRVVRFHDDLEKEKLQEGEESHMEMSAYEMRSEYKHGKDAINKPSSNGRGLSRVFSEDYDAGEILVFDPRGPRINLWNKIFLAACLISLFVDPLFFYLPVAKKEKCIDMSIGLEVSLTIIRTFVDAFYIIHIYIRFQTAYIAPSSRVSGRGELIIDSSKIASNYMKKEFWSDLVAALPLPQVLIWAVIPNIKGSEMIASRHVVRLVSIFQYLLRLYLIYPLSSKITKASGVMMEKAWAGAAYYLTLYMLASHVLGSTWYLLSIERQDECWKKACTLQYPHCQYHYLDCRSLSDPNRNAWLKSSNLSGLCDQNSHFFQFGIFYDAVTLEITSSNFLTKYYYCLWWGLRNLSSSGENLLTSTHVAEINFAVIVAILGLVLFALLIGNMQTYLQSTTIRLEEWRIRRTDTERWMHHRQLPRYLKENVRRHDQFRWVATRGVDEEAILRDLPVDLRRDIKRHLCLNLVRQVPLFDQMDDRMLDAICERLKPTLCTPGTCIVREGDPVDEMLFIVRGRLDSCTTNGGRTGFFNTCRISSGDFCGEELLPWALDPRPTAVFPSSTRTVRAITEVEAFALIAEDLKFVAAQFRRLHSKQLRQTFRFYSHQWRTWAACFIQA