Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81360.t1 | XP_003617748.1 | 89.1 | 313 | 34 | 0 | 1 | 313 | 1 | 313 | 1.80E-113 | 419.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81360.t1 | Q5NCR9 | 41.2 | 165 | 92 | 4 | 56 | 218 | 62 | 223 | 1.7e-11 | 71.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81360.t1 | B7FNC6 | 89.1 | 313 | 34 | 0 | 1 | 313 | 1 | 313 | 1.3e-113 | 419.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene057055 | MS.gene81360 | 0.800122 | 1.67E-48 | -1.69E-46 |
MS.gene057056 | MS.gene81360 | 0.93139 | 4.06E-94 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81360.t1 | MTR_5g095010 | 98.083 | 313 | 6 | 0 | 1 | 313 | 1 | 313 | 0.0 | 616 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81360.t1 | AT2G27285 | 47.368 | 323 | 150 | 7 | 1 | 311 | 1 | 315 | 1.03e-75 | 235 |
MS.gene81360.t1 | AT2G27280 | 45.768 | 319 | 129 | 10 | 1 | 311 | 142 | 424 | 2.60e-61 | 201 |
MS.gene81360.t1 | AT1G55928 | 52.968 | 219 | 95 | 6 | 1 | 214 | 12 | 227 | 1.74e-52 | 174 |
Find 54 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCTTTCTGAATCAGGTTT+TGG | 0.253915 | 5.2:-80126079 | None:intergenic |
ATCATCTTTGCTTCTCTCCT+TGG | 0.304596 | 5.2:-80126147 | None:intergenic |
TCTGCAGAAGCATCGGGATT+TGG | 0.314331 | 5.2:-80126804 | None:intergenic |
TGCTGCTGATTTGATGCATC+AGG | 0.317421 | 5.2:-80126645 | None:intergenic |
CTCATTCCCTCACGTTTCTC+TGG | 0.342667 | 5.2:-80126621 | None:intergenic |
GGCCTCGGTGGTTGCTTCTT+CGG | 0.365460 | 5.2:-80125292 | None:intergenic |
TGTAACATATTTGTCTTTGT+CGG | 0.367853 | 5.2:-80126180 | None:intergenic |
GAAGCTGGTGGCTTCTCAAC+TGG | 0.367854 | 5.2:-80126837 | None:intergenic |
CCGCTTCAAATGAACAAGTA+TGG | 0.396751 | 5.2:+80125247 | None:intergenic |
GACTCCGTCATAATCAAATA+TGG | 0.404782 | 5.2:-80125562 | None:intergenic |
GGTTGCTTCTTCGGCTTCGC+AGG | 0.425435 | 5.2:-80125283 | None:intergenic |
ACAAGTATGGCTTGAACCTT+AGG | 0.429919 | 5.2:+80125260 | MS.gene81360:CDS |
TTTCTCTGGAACTCTATTCT+CGG | 0.444819 | 5.2:-80126607 | None:intergenic |
TCAGGATTTGGTTGTGAAGC+TGG | 0.459984 | 5.2:-80126852 | None:intergenic |
AGGGGAGAAAACGTGACAAT+CGG | 0.466476 | 5.2:+80126583 | MS.gene81360:CDS |
TCTTCGGCTTCGCAGGCCTA+AGG | 0.474287 | 5.2:-80125276 | None:intergenic |
CCGAGGGCAATGGACGGCCT+CGG | 0.490294 | 5.2:-80125307 | None:intergenic |
TTCATTAAAGCCGAGGGCAA+TGG | 0.490951 | 5.2:-80125317 | None:intergenic |
AGTTCACCAGAAGAGTCTCC+AGG | 0.503593 | 5.2:+80126711 | MS.gene81360:CDS |
GGGGAGAAAACGTGACAATC+GGG | 0.504890 | 5.2:+80126584 | MS.gene81360:CDS |
TCTTCGCGATCTTGTATCAA+TGG | 0.506015 | 5.2:-80125615 | None:intergenic |
TAATAGAAGTGCCAGTCCCT+TGG | 0.509927 | 5.2:+80126773 | MS.gene81360:CDS |
ACAAGATCGCGAAGAGAGAA+AGG | 0.511139 | 5.2:+80125623 | MS.gene81360:CDS |
ACGTATACGCGAACTTCAAG+AGG | 0.525424 | 5.2:+80126253 | MS.gene81360:CDS |
GGAGCAGCAAAGAAAAGCCT+TGG | 0.526026 | 5.2:+80125527 | MS.gene81360:CDS |
TGATGCATCAAATCAGCAGC+AGG | 0.545607 | 5.2:+80126647 | MS.gene81360:CDS |
TGCATAGGTTACGAAGAAGA+AGG | 0.547399 | 5.2:+80126497 | MS.gene81360:intron |
TGGCTTCATAGCCAAGGGAC+TGG | 0.560491 | 5.2:-80126784 | None:intergenic |
CATCATCTTCATTAAAGCCG+AGG | 0.561447 | 5.2:-80125324 | None:intergenic |
ATCATCTTCATTAAAGCCGA+GGG | 0.562099 | 5.2:-80125323 | None:intergenic |
GGATTTGGTTGTGAAGCTGG+TGG | 0.565744 | 5.2:-80126849 | None:intergenic |
CCGAGGCCGTCCATTGCCCT+CGG | 0.571438 | 5.2:+80125307 | MS.gene81360:CDS |
GGGATTTGGCTTCATAGCCA+AGG | 0.575475 | 5.2:-80126790 | None:intergenic |
TAGCAAGAGTAAAAGTCTCA+AGG | 0.575504 | 5.2:+80125381 | MS.gene81360:CDS |
GCTGCTGATTTGATGCATCA+GGG | 0.575527 | 5.2:-80126644 | None:intergenic |
GGATTTGGCTTCATAGCCAA+GGG | 0.576616 | 5.2:-80126789 | None:intergenic |
TATGGTCGGATCTTCTTCCA+AGG | 0.578834 | 5.2:-80125544 | None:intergenic |
AGGGCAATGGACGGCCTCGG+TGG | 0.589223 | 5.2:-80125304 | None:intergenic |
CCGACCATATTTGATTATGA+CGG | 0.590424 | 5.2:+80125558 | MS.gene81360:CDS |
AGATGAAGAGCAACATTCGT+TGG | 0.592495 | 5.2:+80126680 | MS.gene81360:CDS |
TTTGGTGCAAAAGATGCTCA+GGG | 0.602366 | 5.2:+80126564 | MS.gene81360:CDS |
CAAAAGAAGTCAAGATGCTG+TGG | 0.604246 | 5.2:+80126881 | MS.gene81360:CDS |
ATTTGTCTTTGTCGGCAAAG+AGG | 0.614244 | 5.2:-80126172 | None:intergenic |
CCGTCATAATCAAATATGGT+CGG | 0.619416 | 5.2:-80125558 | None:intergenic |
CGAACTTCAAGAGGAAAGAG+AGG | 0.624167 | 5.2:+80126262 | MS.gene81360:CDS |
TGCTGAACGAGAGAAACAGA+TGG | 0.626499 | 5.2:+80126223 | MS.gene81360:CDS |
TAGAGTTCCAGAGAAACGTG+AGG | 0.630094 | 5.2:+80126614 | MS.gene81360:CDS |
AAATCCCGATGCTTCTGCAG+AGG | 0.635355 | 5.2:+80126806 | MS.gene81360:CDS |
GCATCAAATCAGCAGCAGGA+TGG | 0.636667 | 5.2:+80126651 | MS.gene81360:CDS |
GTTCACCAGAAGAGTCTCCA+GGG | 0.644434 | 5.2:+80126712 | MS.gene81360:CDS |
AGAGTTCCAGAGAAACGTGA+GGG | 0.653129 | 5.2:+80126615 | MS.gene81360:CDS |
TTAAAGCCGAGGGCAATGGA+CGG | 0.661471 | 5.2:-80125313 | None:intergenic |
AGCCGAAGAAGCAACCACCG+AGG | 0.687950 | 5.2:+80125290 | MS.gene81360:CDS |
TTGGTGCAAAAGATGCTCAG+GGG | 0.730452 | 5.2:+80126565 | MS.gene81360:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACAAATTAAACAAAATTAT+TGG | - | chr5.2:80125949-80125968 | None:intergenic | 10.0% |
!! | ATTAAACAAAATTATTGGAA+AGG | - | chr5.2:80125944-80125963 | None:intergenic | 15.0% |
!!! | ATTTAAAATAGTGTTTTCAT+TGG | + | chr5.2:80125868-80125887 | MS.gene81360:intron | 15.0% |
!!! | GATTTTCATGTATTTTAAAA+TGG | + | chr5.2:80126358-80126377 | MS.gene81360:intron | 15.0% |
!!! | GTTTTTTATTTTACTTTCTT+GGG | + | chr5.2:80125966-80125985 | MS.gene81360:intron | 15.0% |
!!! | TGTTTTTTATTTTACTTTCT+TGG | + | chr5.2:80125965-80125984 | MS.gene81360:intron | 15.0% |
!!! | TTGTTTTTAATTATTTGCAT+AGG | + | chr5.2:80126482-80126501 | MS.gene81360:intron | 15.0% |
!!! | TTTTAAAATACATGAAAATC+AGG | - | chr5.2:80126358-80126377 | None:intergenic | 15.0% |
!!! | TTTTTTATTTTACTTTCTTG+GGG | + | chr5.2:80125967-80125986 | MS.gene81360:intron | 15.0% |
!! | AAATTAACTGAAAAAGTTGA+GGG | - | chr5.2:80126406-80126425 | None:intergenic | 20.0% |
!! | AATGAATTACTGAAAAAAAC+AGG | - | chr5.2:80126297-80126316 | None:intergenic | 20.0% |
!! | ATGTCAGTAATTCAAAATAT+AGG | - | chr5.2:80126459-80126478 | None:intergenic | 20.0% |
!! | CTCATAATTATGATGAAATT+TGG | - | chr5.2:80125745-80125764 | None:intergenic | 20.0% |
!! | GTAATTCAAAATATAGGTAT+AGG | - | chr5.2:80126453-80126472 | None:intergenic | 20.0% |
!!! | TTATGATCTAACTTTCTTTT+TGG | + | chr5.2:80125466-80125485 | MS.gene81360:intron | 20.0% |
!!! | TTTTTATTTTACTTTCTTGG+GGG | + | chr5.2:80125968-80125987 | MS.gene81360:intron | 20.0% |
!!! | TTTTTTCTTTCCCTTATTTA+AGG | + | chr5.2:80125500-80125519 | MS.gene81360:intron | 20.0% |
! | ATATTCACATACTTACATGA+TGG | + | chr5.2:80125791-80125810 | MS.gene81360:intron | 25.0% |
! | CAAATTAACTGAAAAAGTTG+AGG | - | chr5.2:80126407-80126426 | None:intergenic | 25.0% |
! | TAATTTGGTATGCTTGTTTA+TGG | + | chr5.2:80126420-80126439 | MS.gene81360:intron | 25.0% |
! | TGTAACATATTTGTCTTTGT+CGG | - | chr5.2:80126183-80126202 | None:intergenic | 25.0% |
!! | CAAAAGCAACATTTTTATCA+AGG | - | chr5.2:80126548-80126567 | None:intergenic | 25.0% |
!!! | ATCAGGTTTTGGATATATTT+TGG | - | chr5.2:80126071-80126090 | None:intergenic | 25.0% |
!!! | CTCAACTTTTTCAGTTAATT+TGG | + | chr5.2:80126405-80126424 | MS.gene81360:intron | 25.0% |
!!! | CTTGATAAAAATGTTGCTTT+TGG | + | chr5.2:80126546-80126565 | MS.gene81360:CDS | 25.0% |
!!! | GTAAACCTTACATTTTAATC+TGG | + | chr5.2:80125410-80125429 | MS.gene81360:intron | 25.0% |
!!! | TGTGTTCATTTTGGTTAATT+TGG | + | chr5.2:80126003-80126022 | MS.gene81360:intron | 25.0% |
ATATGAGAAAAAGATTGCCA+AGG | + | chr5.2:80126130-80126149 | MS.gene81360:CDS | 30.0% | |
TATGCACTTTCATATTGCAA+AGG | - | chr5.2:80125774-80125793 | None:intergenic | 30.0% | |
TGAAAAAGAAATTGCTATCC+AGG | + | chr5.2:80125357-80125376 | MS.gene81360:CDS | 30.0% | |
! | AAGATACAGTCAATTTTCCT+AGG | - | chr5.2:80125819-80125838 | None:intergenic | 30.0% |
! | ATGCTGAAATGTGTTCATTT+TGG | + | chr5.2:80125994-80126013 | MS.gene81360:intron | 30.0% |
!! | AACCTTACATTTTAATCTGG+TGG | + | chr5.2:80125413-80125432 | MS.gene81360:intron | 30.0% |
!!! | TGTTTTCATTGGTTTAGAGA+AGG | + | chr5.2:80125879-80125898 | MS.gene81360:intron | 30.0% |
AAAAGTTGAGGGAGAAAGAA+AGG | - | chr5.2:80126395-80126414 | None:intergenic | 35.0% | |
AGCCACCAGATTAAAATGTA+AGG | - | chr5.2:80125418-80125437 | None:intergenic | 35.0% | |
AGCTCAGTAGAGAATCATAA+CGG | + | chr5.2:80125709-80125728 | MS.gene81360:intron | 35.0% | |
ATCATCTTCATTAAAGCCGA+GGG | - | chr5.2:80125326-80125345 | None:intergenic | 35.0% | |
CCGACCATATTTGATTATGA+CGG | + | chr5.2:80125558-80125577 | MS.gene81360:CDS | 35.0% | |
CCGTCATAATCAAATATGGT+CGG | - | chr5.2:80125561-80125580 | None:intergenic | 35.0% | |
GACTCCGTCATAATCAAATA+TGG | - | chr5.2:80125565-80125584 | None:intergenic | 35.0% | |
TAGCAAGAGTAAAAGTCTCA+AGG | + | chr5.2:80125381-80125400 | MS.gene81360:CDS | 35.0% | |
TGCTCCTCAACCTTAAATAA+GGG | - | chr5.2:80125513-80125532 | None:intergenic | 35.0% | |
! | CTTTCCCTTATTTAAGGTTG+AGG | + | chr5.2:80125506-80125525 | MS.gene81360:intron | 35.0% |
! | TTGCTTTCTGAATCAGGTTT+TGG | - | chr5.2:80126082-80126101 | None:intergenic | 35.0% |
!! | ATACTTACATGATGGATCCT+AGG | + | chr5.2:80125799-80125818 | MS.gene81360:intron | 35.0% |
!! | TTTCTCTGGAACTCTATTCT+CGG | - | chr5.2:80126610-80126629 | None:intergenic | 35.0% |
ACAAGTATGGCTTGAACCTT+AGG | + | chr5.2:80125260-80125279 | MS.gene81360:CDS | 40.0% | |
AGATGAAGAGCAACATTCGT+TGG | + | chr5.2:80126680-80126699 | MS.gene81360:CDS | 40.0% | |
ATCATCTTTGCTTCTCTCCT+TGG | - | chr5.2:80126150-80126169 | None:intergenic | 40.0% | |
ATTTGTCTTTGTCGGCAAAG+AGG | - | chr5.2:80126175-80126194 | None:intergenic | 40.0% | |
CAAAAGAAGTCAAGATGCTG+TGG | + | chr5.2:80126881-80126900 | MS.gene81360:CDS | 40.0% | |
CATCATCTTCATTAAAGCCG+AGG | - | chr5.2:80125327-80125346 | None:intergenic | 40.0% | |
CTGCTCCTCAACCTTAAATA+AGG | - | chr5.2:80125514-80125533 | None:intergenic | 40.0% | |
TCTTCGCGATCTTGTATCAA+TGG | - | chr5.2:80125618-80125637 | None:intergenic | 40.0% | |
TGCATAGGTTACGAAGAAGA+AGG | + | chr5.2:80126497-80126516 | MS.gene81360:intron | 40.0% | |
! | AGGGAAAAAGATTGGTGATC+AGG | + | chr5.2:80126731-80126750 | MS.gene81360:CDS | 40.0% |
! | CTTTTGTGATGCTCAGGATT+TGG | - | chr5.2:80126867-80126886 | None:intergenic | 40.0% |
! | GCTCTTTTGCTTTCTGAATC+AGG | - | chr5.2:80126088-80126107 | None:intergenic | 40.0% |
! | GGGAAAAAGATTGGTGATCA+GGG | + | chr5.2:80126732-80126751 | MS.gene81360:CDS | 40.0% |
! | TGACTTCTTTTGTGATGCTC+AGG | - | chr5.2:80126873-80126892 | None:intergenic | 40.0% |
! | TGATCACCAATCTTTTTCCC+TGG | - | chr5.2:80126732-80126751 | None:intergenic | 40.0% |
! | TGCAGCAAAAGAACGTTTTC+TGG | + | chr5.2:80126905-80126924 | MS.gene81360:CDS | 40.0% |
! | TTTGGTGCAAAAGATGCTCA+GGG | + | chr5.2:80126564-80126583 | MS.gene81360:CDS | 40.0% |
!! | TTTTGGTGCAAAAGATGCTC+AGG | + | chr5.2:80126563-80126582 | MS.gene81360:CDS | 40.0% |
ACAAGATCGCGAAGAGAGAA+AGG | + | chr5.2:80125623-80125642 | MS.gene81360:CDS | 45.0% | |
ACGTATACGCGAACTTCAAG+AGG | + | chr5.2:80126253-80126272 | MS.gene81360:CDS | 45.0% | |
AGAGTTCCAGAGAAACGTGA+GGG | + | chr5.2:80126615-80126634 | MS.gene81360:CDS | 45.0% | |
AGGGGAGAAAACGTGACAAT+CGG | + | chr5.2:80126583-80126602 | MS.gene81360:CDS | 45.0% | |
ATCGCGAAGAGAGAAAGGTA+TGG | + | chr5.2:80125628-80125647 | MS.gene81360:intron | 45.0% | |
CGAACTTCAAGAGGAAAGAG+AGG | + | chr5.2:80126262-80126281 | MS.gene81360:CDS | 45.0% | |
GAGTCTCCAGGGAAAAAGAT+TGG | + | chr5.2:80126723-80126742 | MS.gene81360:CDS | 45.0% | |
TAGAGTTCCAGAGAAACGTG+AGG | + | chr5.2:80126614-80126633 | MS.gene81360:CDS | 45.0% | |
TATGGTCGGATCTTCTTCCA+AGG | - | chr5.2:80125547-80125566 | None:intergenic | 45.0% | |
TGATGCATCAAATCAGCAGC+AGG | + | chr5.2:80126647-80126666 | MS.gene81360:CDS | 45.0% | |
TGCTGAACGAGAGAAACAGA+TGG | + | chr5.2:80126223-80126242 | MS.gene81360:CDS | 45.0% | |
TTCATTAAAGCCGAGGGCAA+TGG | - | chr5.2:80125320-80125339 | None:intergenic | 45.0% | |
TTGGTGCAAAAGATGCTCAG+GGG | + | chr5.2:80126565-80126584 | MS.gene81360:CDS | 45.0% | |
! | GACTTTTACTCTTGCTAGCC+TGG | - | chr5.2:80125378-80125397 | None:intergenic | 45.0% |
! | GGATTTGGCTTCATAGCCAA+GGG | - | chr5.2:80126792-80126811 | None:intergenic | 45.0% |
! | TCAGGATTTGGTTGTGAAGC+TGG | - | chr5.2:80126855-80126874 | None:intergenic | 45.0% |
! | TTTTTCCCTGGAGACTCTTC+TGG | - | chr5.2:80126720-80126739 | None:intergenic | 45.0% |
!! | CTTTTCCTCTGCAGAAGCAT+CGG | - | chr5.2:80126814-80126833 | None:intergenic | 45.0% |
!! | GCTGCTGATTTGATGCATCA+GGG | - | chr5.2:80126647-80126666 | None:intergenic | 45.0% |
!! | TAATAGAAGTGCCAGTCCCT+TGG | + | chr5.2:80126773-80126792 | MS.gene81360:CDS | 45.0% |
!! | TGCTGCTGATTTGATGCATC+AGG | - | chr5.2:80126648-80126667 | None:intergenic | 45.0% |
!!! | TTTTCCTCTGCAGAAGCATC+GGG | - | chr5.2:80126813-80126832 | None:intergenic | 45.0% |
AAATCCCGATGCTTCTGCAG+AGG | + | chr5.2:80126806-80126825 | MS.gene81360:CDS | 50.0% | |
AGTTCACCAGAAGAGTCTCC+AGG | + | chr5.2:80126711-80126730 | MS.gene81360:CDS | 50.0% | |
CTCATTCCCTCACGTTTCTC+TGG | - | chr5.2:80126624-80126643 | None:intergenic | 50.0% | |
GCATCAAATCAGCAGCAGGA+TGG | + | chr5.2:80126651-80126670 | MS.gene81360:CDS | 50.0% | |
GGAGCAGCAAAGAAAAGCCT+TGG | + | chr5.2:80125527-80125546 | MS.gene81360:CDS | 50.0% | |
GGGGAGAAAACGTGACAATC+GGG | + | chr5.2:80126584-80126603 | MS.gene81360:CDS | 50.0% | |
GTTCACCAGAAGAGTCTCCA+GGG | + | chr5.2:80126712-80126731 | MS.gene81360:CDS | 50.0% | |
TTAAAGCCGAGGGCAATGGA+CGG | - | chr5.2:80125316-80125335 | None:intergenic | 50.0% | |
! | GGATTTGGTTGTGAAGCTGG+TGG | - | chr5.2:80126852-80126871 | None:intergenic | 50.0% |
! | GGGATTTGGCTTCATAGCCA+AGG | - | chr5.2:80126793-80126812 | None:intergenic | 50.0% |
!! | TCTGCAGAAGCATCGGGATT+TGG | - | chr5.2:80126807-80126826 | None:intergenic | 50.0% |
GAAGCTGGTGGCTTCTCAAC+TGG | - | chr5.2:80126840-80126859 | None:intergenic | 55.0% | |
TGGCTTCATAGCCAAGGGAC+TGG | - | chr5.2:80126787-80126806 | None:intergenic | 55.0% | |
AGCCGAAGAAGCAACCACCG+AGG | + | chr5.2:80125290-80125309 | MS.gene81360:CDS | 60.0% | |
GGCCTCGGTGGTTGCTTCTT+CGG | - | chr5.2:80125295-80125314 | None:intergenic | 60.0% | |
GGTTGCTTCTTCGGCTTCGC+AGG | - | chr5.2:80125286-80125305 | None:intergenic | 60.0% | |
TCTTCGGCTTCGCAGGCCTA+AGG | - | chr5.2:80125279-80125298 | None:intergenic | 60.0% | |
AGGGCAATGGACGGCCTCGG+TGG | - | chr5.2:80125307-80125326 | None:intergenic | 70.0% | |
CCGAGGCCGTCCATTGCCCT+CGG | + | chr5.2:80125307-80125326 | MS.gene81360:CDS | 70.0% | |
CCGAGGGCAATGGACGGCCT+CGG | - | chr5.2:80125310-80125329 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 80125256 | 80126953 | 80125256 | ID=MS.gene81360 |
chr5.2 | mRNA | 80125256 | 80126953 | 80125256 | ID=MS.gene81360.t1;Parent=MS.gene81360 |
chr5.2 | exon | 80125256 | 80125405 | 80125256 | ID=MS.gene81360.t1.exon1;Parent=MS.gene81360.t1 |
chr5.2 | CDS | 80125256 | 80125405 | 80125256 | ID=cds.MS.gene81360.t1;Parent=MS.gene81360.t1 |
chr5.2 | exon | 80125522 | 80125644 | 80125522 | ID=MS.gene81360.t1.exon2;Parent=MS.gene81360.t1 |
chr5.2 | CDS | 80125522 | 80125644 | 80125522 | ID=cds.MS.gene81360.t1;Parent=MS.gene81360.t1 |
chr5.2 | exon | 80126068 | 80126286 | 80126068 | ID=MS.gene81360.t1.exon3;Parent=MS.gene81360.t1 |
chr5.2 | CDS | 80126068 | 80126286 | 80126068 | ID=cds.MS.gene81360.t1;Parent=MS.gene81360.t1 |
chr5.2 | exon | 80126504 | 80126953 | 80126504 | ID=MS.gene81360.t1.exon4;Parent=MS.gene81360.t1 |
chr5.2 | CDS | 80126504 | 80126953 | 80126504 | ID=cds.MS.gene81360.t1;Parent=MS.gene81360.t1 |
Gene Sequence |
Protein sequence |