Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81492.t1 | XP_013452366.1 | 96 | 273 | 11 | 0 | 1 | 273 | 25 | 297 | 2.80E-150 | 541.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81492.t1 | Q8GXT7 | 47.5 | 280 | 124 | 5 | 1 | 273 | 28 | 291 | 6.9e-65 | 248.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81492.t1 | A0A072U9B5 | 96.0 | 273 | 11 | 0 | 1 | 273 | 25 | 297 | 2.0e-150 | 541.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050844 | MS.gene81492 | 0.803779 | 2.96E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene81492 | 0.807806 | 4.22E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene81492 | 0.8186 | 1.80E-52 | -1.69E-46 |
| MS.gene055227 | MS.gene81492 | 0.806293 | 8.82E-50 | -1.69E-46 |
| MS.gene055926 | MS.gene81492 | 0.816332 | 5.84E-52 | -1.69E-46 |
| MS.gene056174 | MS.gene81492 | 0.807351 | 5.27E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene81492 | 0.80135 | 9.39E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 63 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGACCACATATCGCCTTTA+AGG | 0.151018 | 6.4:-20977401 | None:intergenic |
| CCTTTACAGGTCATGCATTA+TGG | 0.184280 | 6.4:+20976724 | MS.gene81492:CDS |
| TTTCACAAACAAAACCAAAT+TGG | 0.191233 | 6.4:+20976777 | MS.gene81492:CDS |
| GCTCGATGCCCTGTCCTTAA+AGG | 0.210672 | 6.4:+20977387 | MS.gene81492:CDS |
| TCTTGTCAGGAGATGTATTT+AGG | 0.219035 | 6.4:-20977353 | None:intergenic |
| ACCTTGGTTGCCAAGAGATT+TGG | 0.242434 | 6.4:-20972723 | None:intergenic |
| GTGTGACTACCTTATTTATT+TGG | 0.242556 | 6.4:+20974563 | MS.gene81492:CDS |
| AGAGAACAGCAAGCCTTTAC+AGG | 0.299865 | 6.4:+20976711 | MS.gene81492:intron |
| CTTTACAGGTCATGCATTAT+GGG | 0.305434 | 6.4:+20976725 | MS.gene81492:CDS |
| GCCGTACTCACCACTGATTC+AGG | 0.315848 | 6.4:-20976874 | None:intergenic |
| AGAACTGCATTCCCTTTAAC+TGG | 0.334718 | 6.4:-20977315 | None:intergenic |
| AGAGGAAACTTCATTGGATA+TGG | 0.342638 | 6.4:+20975139 | MS.gene81492:CDS |
| TTCACAAACAAAACCAAATT+GGG | 0.356049 | 6.4:+20976778 | MS.gene81492:CDS |
| AGGTCCGGTTGATCCCAATT+TGG | 0.361801 | 6.4:-20976791 | None:intergenic |
| AAAGAAAGAGGAAACTTCAT+TGG | 0.368859 | 6.4:+20975133 | MS.gene81492:CDS |
| GGGATCAACCGGACCTTTGA+TGG | 0.371144 | 6.4:+20976798 | MS.gene81492:CDS |
| TGCAACATACCAAATAAATA+AGG | 0.373711 | 6.4:-20974572 | None:intergenic |
| TTAGCAGCAGGAAAGAATTA+AGG | 0.376685 | 6.4:+20972623 | None:intergenic |
| GAGGTTCTCCAACCAGTTAA+AGG | 0.393818 | 6.4:+20977303 | MS.gene81492:CDS |
| TTGAAGAAAGACTTTCGGTT+TGG | 0.401961 | 6.4:+20976581 | MS.gene81492:CDS |
| AAAACCAAATTGGGATCAAC+CGG | 0.420089 | 6.4:+20976787 | MS.gene81492:CDS |
| GTTGGATCTCCTGATTACTA+TGG | 0.429222 | 6.4:+20977564 | MS.gene81492:CDS |
| CGACAAGTACCATAGTAATC+AGG | 0.442588 | 6.4:-20977573 | None:intergenic |
| GAGGATTGAAGAAAGACTTT+CGG | 0.449118 | 6.4:+20976576 | MS.gene81492:CDS |
| CACGTGTTGTCCAAATCTCT+TGG | 0.461511 | 6.4:+20972713 | MS.gene81492:CDS |
| TCTCCCGTTGCTGCCCAAGC+TGG | 0.465114 | 6.4:-20977516 | None:intergenic |
| CTGCATTCCCTTTAACTGGT+TGG | 0.472708 | 6.4:-20977311 | None:intergenic |
| AGATGATAGTTGTCCAGCTT+GGG | 0.474954 | 6.4:+20977503 | MS.gene81492:CDS |
| CACTGTTGCCATCAAAGGTC+CGG | 0.475147 | 6.4:-20976806 | None:intergenic |
| TGTCCAGCTTGGGCAGCAAC+GGG | 0.476542 | 6.4:+20977513 | MS.gene81492:CDS |
| GCGTGTAAGCTACTCTTGTC+AGG | 0.476850 | 6.4:-20977366 | None:intergenic |
| AGGTTCTCCAACCAGTTAAA+GGG | 0.477047 | 6.4:+20977304 | MS.gene81492:CDS |
| CCATAATGCATGACCTGTAA+AGG | 0.487176 | 6.4:-20976724 | None:intergenic |
| AAGATGATAGTTGTCCAGCT+TGG | 0.488359 | 6.4:+20977502 | MS.gene81492:CDS |
| CGGAACCCTGTCTACATGGT+TGG | 0.491604 | 6.4:+20977546 | MS.gene81492:CDS |
| ATTTGACCAGCTGCTACTCT+TGG | 0.492285 | 6.4:-20977265 | None:intergenic |
| GGAGATCCAACCATGTAGAC+AGG | 0.498626 | 6.4:-20977552 | None:intergenic |
| TTGTCCAGCTTGGGCAGCAA+CGG | 0.515020 | 6.4:+20977512 | MS.gene81492:CDS |
| CACATATCGCCTTTAAGGAC+AGG | 0.515314 | 6.4:-20977396 | None:intergenic |
| CTGATTACTATGGTACTTGT+CGG | 0.527249 | 6.4:+20977574 | MS.gene81492:CDS |
| TCAACGGAACCCTGTCTACA+TGG | 0.530423 | 6.4:+20977542 | MS.gene81492:CDS |
| TGGTGGCTATTCAAAGAAAG+AGG | 0.553698 | 6.4:+20975121 | MS.gene81492:CDS |
| AGAATCACTGTTGCCATCAA+AGG | 0.553753 | 6.4:-20976811 | None:intergenic |
| CACCACTGATTCAGGAAAGA+GGG | 0.567187 | 6.4:-20976866 | None:intergenic |
| ATCTCTCGAATGCTACTCAA+GGG | 0.570249 | 6.4:+20976836 | MS.gene81492:CDS |
| TCACCACTGATTCAGGAAAG+AGG | 0.571225 | 6.4:-20976867 | None:intergenic |
| CATCTCTCGAATGCTACTCA+AGG | 0.573935 | 6.4:+20976835 | MS.gene81492:CDS |
| AACCCTCTTTCCTGAATCAG+TGG | 0.574378 | 6.4:+20976864 | MS.gene81492:CDS |
| CACAGACCAAGAGTAGCAGC+TGG | 0.591686 | 6.4:+20977259 | MS.gene81492:intron |
| CTGTCCTTAAAGGCGATATG+TGG | 0.609635 | 6.4:+20977397 | MS.gene81492:CDS |
| TCCAAATCTCTTGGCAACCA+AGG | 0.611001 | 6.4:+20972722 | MS.gene81492:CDS |
| TATACAAGATCGATCAGTGG+AGG | 0.618199 | 6.4:+20977438 | MS.gene81492:CDS |
| GAGATTTGGACAACACGTGA+AGG | 0.623698 | 6.4:-20972709 | None:intergenic |
| AGGGAAAGTCTCAATTACGC+TGG | 0.631175 | 6.4:+20977458 | MS.gene81492:CDS |
| TTTAGGATGATATTGTCAAG+AGG | 0.632824 | 6.4:+20976557 | MS.gene81492:intron |
| ATACAAGATCGATCAGTGGA+GGG | 0.641541 | 6.4:+20977439 | MS.gene81492:CDS |
| CAGCAACGGGAGAATGTCAA+CGG | 0.647505 | 6.4:+20977526 | MS.gene81492:CDS |
| TTCTATACAAGATCGATCAG+TGG | 0.652183 | 6.4:+20977435 | MS.gene81492:CDS |
| TCTCTCGAATGCTACTCAAG+GGG | 0.663851 | 6.4:+20976837 | MS.gene81492:CDS |
| GAGATCCAACCATGTAGACA+GGG | 0.668526 | 6.4:-20977551 | None:intergenic |
| ACATATCGCCTTTAAGGACA+GGG | 0.680203 | 6.4:-20977395 | None:intergenic |
| CTCTCGAATGCTACTCAAGG+GGG | 0.692797 | 6.4:+20976838 | MS.gene81492:CDS |
| AAATTGTAGAAATAACAGTG+AGG | 0.789611 | 6.4:+20977284 | MS.gene81492:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATATATAATAATAA+AGG | - | chr6.4:20972782-20972801 | None:intergenic | 0.0% |
| !! | AATATTATTATTATTATGAG+CGG | + | chr6.4:20972893-20972912 | MS.gene81492:intron | 10.0% |
| !! | ATATAATAATAAAGGAATAA+AGG | - | chr6.4:20972774-20972793 | None:intergenic | 10.0% |
| !! | TATAATAATAAAGGAATAAA+GGG | - | chr6.4:20972773-20972792 | None:intergenic | 10.0% |
| !! | TTAATTATATTATAAGTAGA+GGG | + | chr6.4:20974873-20974892 | MS.gene81492:intron | 10.0% |
| !! | TTTAATTATATTATAAGTAG+AGG | + | chr6.4:20974872-20974891 | MS.gene81492:intron | 10.0% |
| !!! | TTTTAAATTACAGAAAATTA+TGG | - | chr6.4:20976354-20976373 | None:intergenic | 10.0% |
| !! | AAACGGAAAAAAAAAATTAA+GGG | - | chr6.4:20976988-20977007 | None:intergenic | 15.0% |
| !! | ATCAATGTAAAACTAATTTA+TGG | + | chr6.4:20974808-20974827 | MS.gene81492:intron | 15.0% |
| !! | TAAAAATAACAGTGTAATTT+AGG | + | chr6.4:20977186-20977205 | MS.gene81492:intron | 15.0% |
| !! | TAATTATATTATAAGTAGAG+GGG | + | chr6.4:20974874-20974893 | MS.gene81492:intron | 15.0% |
| !! | TATGTTCATTAAAGATATAT+CGG | - | chr6.4:20974659-20974678 | None:intergenic | 15.0% |
| !! | TTATTGTCGAAAATTAATAT+AGG | + | chr6.4:20976038-20976057 | MS.gene81492:intron | 15.0% |
| !!! | AAATTTGGAATTAACTAATT+AGG | - | chr6.4:20976137-20976156 | None:intergenic | 15.0% |
| !!! | ATTTTTCTATTAGTTTGTTA+TGG | + | chr6.4:20972962-20972981 | MS.gene81492:intron | 15.0% |
| !!! | GTAATTTAAAATATCATAAC+CGG | + | chr6.4:20976363-20976382 | MS.gene81492:intron | 15.0% |
| !!! | TAAATTACACTGTTATTTTT+AGG | - | chr6.4:20977187-20977206 | None:intergenic | 15.0% |
| !!! | TTTTAAATTTGAGATAATAG+TGG | + | chr6.4:20973032-20973051 | MS.gene81492:intron | 15.0% |
| !!! | TTTTTCTATTAGTTTGTTAT+GGG | + | chr6.4:20972963-20972982 | MS.gene81492:intron | 15.0% |
| !! | AAAGTAACATTTATAACTGA+AGG | - | chr6.4:20977021-20977040 | None:intergenic | 20.0% |
| !! | AAATATACAGTTACAAATGT+GGG | + | chr6.4:20974752-20974771 | MS.gene81492:intron | 20.0% |
| !! | AACGGAAAAAAAAAATTAAG+GGG | - | chr6.4:20976987-20977006 | None:intergenic | 20.0% |
| !! | AAGTAACATTTATAACTGAA+GGG | - | chr6.4:20977020-20977039 | None:intergenic | 20.0% |
| !! | AATAAATGTTCATTTCCATT+TGG | + | chr6.4:20972998-20973017 | MS.gene81492:intron | 20.0% |
| !! | AGTTGTTTATTAGTAGAATT+CGG | + | chr6.4:20973774-20973793 | MS.gene81492:intron | 20.0% |
| !! | ATAAGTATAGAAAAAAGTTC+AGG | - | chr6.4:20975172-20975191 | None:intergenic | 20.0% |
| !! | ATTTACCATTTACTTAATGT+AGG | + | chr6.4:20975394-20975413 | MS.gene81492:intron | 20.0% |
| !! | CATAATCAAAAAGAAAACAA+AGG | - | chr6.4:20977227-20977246 | None:intergenic | 20.0% |
| !! | GAAACGGAAAAAAAAAATTA+AGG | - | chr6.4:20976989-20977008 | None:intergenic | 20.0% |
| !! | GTGTAATGATTGTAATTTAA+GGG | + | chr6.4:20977124-20977143 | MS.gene81492:intron | 20.0% |
| !! | TAAATATACAGTTACAAATG+TGG | + | chr6.4:20974751-20974770 | MS.gene81492:intron | 20.0% |
| !! | TCATTAGTGTTATAAGTTAT+AGG | + | chr6.4:20976488-20976507 | MS.gene81492:intron | 20.0% |
| !! | TGTGTAATGATTGTAATTTA+AGG | + | chr6.4:20977123-20977142 | MS.gene81492:intron | 20.0% |
| !! | TTGAAAATTTGCATATGTAA+TGG | - | chr6.4:20973677-20973696 | None:intergenic | 20.0% |
| !! | TTGAAAGTCTTAAATAGAAA+TGG | - | chr6.4:20974916-20974935 | None:intergenic | 20.0% |
| !!! | AAAACTGTTTTCATTATTTC+TGG | - | chr6.4:20975612-20975631 | None:intergenic | 20.0% |
| !!! | AATAATATTGAGCTATGTTT+TGG | - | chr6.4:20972882-20972901 | None:intergenic | 20.0% |
| !!! | AATGATATGGTATAGATTTT+TGG | + | chr6.4:20973142-20973161 | MS.gene81492:intron | 20.0% |
| !!! | GTATATTTAAAATGACGATA+TGG | - | chr6.4:20974740-20974759 | None:intergenic | 20.0% |
| !!! | TATACTTATTTTGATGAACT+AGG | + | chr6.4:20975183-20975202 | MS.gene81492:intron | 20.0% |
| !!! | TCTTCTACATTTTCAAAATT+TGG | - | chr6.4:20976152-20976171 | None:intergenic | 20.0% |
| !!! | TTTGACATTTTCATTGTTTA+TGG | + | chr6.4:20975632-20975651 | MS.gene81492:intron | 20.0% |
| !!! | TTTTTTTTAAACTCGGTATT+CGG | + | chr6.4:20972799-20972818 | MS.gene81492:intron | 20.0% |
| ! | AAACAATGTGGTTATAAGTT+GGG | - | chr6.4:20974092-20974111 | None:intergenic | 25.0% |
| ! | AAATTGTAGAAATAACAGTG+AGG | + | chr6.4:20977284-20977303 | MS.gene81492:CDS | 25.0% |
| ! | AACAAGAACATGTAACATAA+TGG | - | chr6.4:20975929-20975948 | None:intergenic | 25.0% |
| ! | AATATACAGTTACAAATGTG+GGG | + | chr6.4:20974753-20974772 | MS.gene81492:intron | 25.0% |
| ! | AGCAGAAAGATATTGAAAAA+CGG | + | chr6.4:20976245-20976264 | MS.gene81492:intron | 25.0% |
| ! | AGTAGAATTCGGTTATAATT+TGG | + | chr6.4:20973785-20973804 | MS.gene81492:intron | 25.0% |
| ! | ATTACAATCATTACACACTT+TGG | - | chr6.4:20977120-20977139 | None:intergenic | 25.0% |
| ! | ATTAGGGTTTAGTACTATAT+TGG | + | chr6.4:20973214-20973233 | MS.gene81492:intron | 25.0% |
| ! | CAAAATGAAACGTAAAAACT+TGG | + | chr6.4:20977149-20977168 | MS.gene81492:intron | 25.0% |
| ! | CAACTAAAATGTAGTTAGTT+AGG | + | chr6.4:20973078-20973097 | MS.gene81492:intron | 25.0% |
| ! | CTTCAAGAATAACTTAATGT+AGG | + | chr6.4:20975432-20975451 | MS.gene81492:intron | 25.0% |
| ! | GAAACCTAAAAATGACTTAA+GGG | - | chr6.4:20976957-20976976 | None:intergenic | 25.0% |
| ! | GAGTACAATATCAGATATTA+GGG | + | chr6.4:20973198-20973217 | MS.gene81492:intron | 25.0% |
| ! | GCGAATGTGTTTATAAATTA+GGG | - | chr6.4:20973859-20973878 | None:intergenic | 25.0% |
| ! | GTAGAATTCGGTTATAATTT+GGG | + | chr6.4:20973786-20973805 | MS.gene81492:intron | 25.0% |
| ! | TAACACTAATGAATTGTTCA+TGG | - | chr6.4:20976480-20976499 | None:intergenic | 25.0% |
| ! | TAATGGTTTATGCAATGATA+TGG | + | chr6.4:20973129-20973148 | MS.gene81492:intron | 25.0% |
| ! | TATAAATTACCAATGATTCG+AGG | + | chr6.4:20973726-20973745 | MS.gene81492:intron | 25.0% |
| ! | TCAGATATAAACCATTCTTA+GGG | + | chr6.4:20975461-20975480 | MS.gene81492:intron | 25.0% |
| ! | TCTGACATTTGATGAAAATA+TGG | - | chr6.4:20973885-20973904 | None:intergenic | 25.0% |
| ! | TGAAACCTAAAAATGACTTA+AGG | - | chr6.4:20976958-20976977 | None:intergenic | 25.0% |
| ! | TGAGTACAATATCAGATATT+AGG | + | chr6.4:20973197-20973216 | MS.gene81492:intron | 25.0% |
| ! | TGCAACATACCAAATAAATA+AGG | - | chr6.4:20974575-20974594 | None:intergenic | 25.0% |
| ! | TGCGAATGTGTTTATAAATT+AGG | - | chr6.4:20973860-20973879 | None:intergenic | 25.0% |
| ! | TTATAGGACAGAAATATTGA+AGG | - | chr6.4:20975959-20975978 | None:intergenic | 25.0% |
| ! | TTCACAAACAAAACCAAATT+GGG | + | chr6.4:20976778-20976797 | MS.gene81492:CDS | 25.0% |
| ! | TTCATTAAAGATATATCGGA+TGG | - | chr6.4:20974655-20974674 | None:intergenic | 25.0% |
| ! | TTGTAGACATTATTATGATG+AGG | + | chr6.4:20976518-20976537 | MS.gene81492:intron | 25.0% |
| ! | TTTAGGCTAAATTAAACCTT+TGG | + | chr6.4:20976930-20976949 | MS.gene81492:intron | 25.0% |
| ! | TTTCACAAACAAAACCAAAT+TGG | + | chr6.4:20976777-20976796 | MS.gene81492:CDS | 25.0% |
| ! | TTTGGAAGAACTTATGAATA+AGG | - | chr6.4:20974278-20974297 | None:intergenic | 25.0% |
| ! | TTTGGATTGTCTTGATATAA+TGG | + | chr6.4:20973112-20973131 | MS.gene81492:intron | 25.0% |
| !! | ATTAGTTTAATGGACATTCA+AGG | + | chr6.4:20974693-20974712 | MS.gene81492:intron | 25.0% |
| !! | CAAGTTTTTACGTTTCATTT+TGG | - | chr6.4:20977151-20977170 | None:intergenic | 25.0% |
| !! | GATTCTGGATAAACATTTTT+GGG | + | chr6.4:20973986-20974005 | MS.gene81492:intron | 25.0% |
| !! | GTCAGTGTAAATTAGTTTAA+TGG | + | chr6.4:20974683-20974702 | MS.gene81492:intron | 25.0% |
| !! | GTTTGCATTGTGAAAATTTT+CGG | + | chr6.4:20975252-20975271 | MS.gene81492:intron | 25.0% |
| !! | TAATTTAGGATATCTTGTTC+TGG | + | chr6.4:20977200-20977219 | MS.gene81492:intron | 25.0% |
| !! | TATGTTTTCACAAAGTAAAC+AGG | + | chr6.4:20975745-20975764 | MS.gene81492:intron | 25.0% |
| !! | TATTAGCTTATTCTTTGTGT+AGG | + | chr6.4:20975321-20975340 | MS.gene81492:intron | 25.0% |
| !! | TGATTCTGGATAAACATTTT+TGG | + | chr6.4:20973985-20974004 | MS.gene81492:intron | 25.0% |
| !! | TTAGTTTAATGGACATTCAA+GGG | + | chr6.4:20974694-20974713 | MS.gene81492:intron | 25.0% |
| !! | TTGCGTACTATTTATCTTTT+AGG | + | chr6.4:20976913-20976932 | MS.gene81492:intron | 25.0% |
| !!! | CTAACTAACTACATTTTAGT+TGG | - | chr6.4:20973080-20973099 | None:intergenic | 25.0% |
| !!! | GTTATTTTTAGGTTTCACTT+TGG | - | chr6.4:20977176-20977195 | None:intergenic | 25.0% |
| !!! | TGAGTTTTTTTTGCAATTCT+TGG | + | chr6.4:20974960-20974979 | MS.gene81492:intron | 25.0% |
| AAAACTAAATCTACGCCAAA+TGG | - | chr6.4:20973016-20973035 | None:intergenic | 30.0% | |
| AAAGAAAGAGGAAACTTCAT+TGG | + | chr6.4:20975133-20975152 | MS.gene81492:CDS | 30.0% | |
| AACAAGTAATTGCAACATGT+TGG | - | chr6.4:20976437-20976456 | None:intergenic | 30.0% | |
| AATGTTTATCCAGAATCAGT+TGG | - | chr6.4:20973983-20974002 | None:intergenic | 30.0% | |
| ACAACGTTTCACAAAGTAAA+CGG | - | chr6.4:20975488-20975507 | None:intergenic | 30.0% | |
| ACATTTACTTGCAAAACACT+TGG | - | chr6.4:20976007-20976026 | None:intergenic | 30.0% | |
| ACTTCAAGAAAACTTACTGT+AGG | + | chr6.4:20975346-20975365 | MS.gene81492:intron | 30.0% | |
| AGAATCAACTAGCTGTAAAA+AGG | - | chr6.4:20974453-20974472 | None:intergenic | 30.0% | |
| AGATCTAGGTATTAGAAACT+TGG | + | chr6.4:20974012-20974031 | MS.gene81492:intron | 30.0% | |
| ATATGGCATGGAAAAATGAA+GGG | - | chr6.4:20974723-20974742 | None:intergenic | 30.0% | |
| ATGTTTATCCAGAATCAGTT+GGG | - | chr6.4:20973982-20974001 | None:intergenic | 30.0% | |
| ATTATGGGCTTGAAAAAGAT+AGG | + | chr6.4:20976740-20976759 | MS.gene81492:CDS | 30.0% | |
| ATTTACATAGCTCTCAATGA+TGG | - | chr6.4:20974236-20974255 | None:intergenic | 30.0% | |
| CAAACAATGTGGTTATAAGT+TGG | - | chr6.4:20974093-20974112 | None:intergenic | 30.0% | |
| CAACTTATAACCACATTGTT+TGG | + | chr6.4:20974091-20974110 | MS.gene81492:intron | 30.0% | |
| CAAGAAAAATCATCTGGAAA+TGG | + | chr6.4:20975101-20975120 | MS.gene81492:CDS | 30.0% | |
| CAGAAAATTATGGCCAAATA+TGG | - | chr6.4:20976344-20976363 | None:intergenic | 30.0% | |
| CTAAAATGTAGTTAGTTAGG+TGG | + | chr6.4:20973081-20973100 | MS.gene81492:intron | 30.0% | |
| CTATGCAACAACTACTATTA+AGG | - | chr6.4:20974371-20974390 | None:intergenic | 30.0% | |
| GAATCAACTAGCTGTAAAAA+GGG | - | chr6.4:20974452-20974471 | None:intergenic | 30.0% | |
| GATCTAGGTATTAGAAACTT+GGG | + | chr6.4:20974013-20974032 | MS.gene81492:intron | 30.0% | |
| GATTGAACCATCAAATTAGT+CGG | - | chr6.4:20972829-20972848 | None:intergenic | 30.0% | |
| GCAACTACTCATATATTTGT+AGG | + | chr6.4:20976185-20976204 | MS.gene81492:intron | 30.0% | |
| GGCAAAATGATGAATCTATA+AGG | + | chr6.4:20973504-20973523 | MS.gene81492:intron | 30.0% | |
| GGTTGATTGTTCATATAAGT+AGG | + | chr6.4:20973525-20973544 | MS.gene81492:intron | 30.0% | |
| GTCAGATATAAACCATTCTT+AGG | + | chr6.4:20975460-20975479 | MS.gene81492:intron | 30.0% | |
| GTCCAACATTGGATAAAATA+TGG | - | chr6.4:20974117-20974136 | None:intergenic | 30.0% | |
| TAAAATATGGCCAAACAATG+TGG | - | chr6.4:20974104-20974123 | None:intergenic | 30.0% | |
| TAATGAATTGTTCATGGTCA+AGG | - | chr6.4:20976474-20976493 | None:intergenic | 30.0% | |
| TAATTAGTGTCCAAAGTTCA+GGG | - | chr6.4:20976114-20976133 | None:intergenic | 30.0% | |
| TATGGTTGATTGAGTGTTAT+AGG | - | chr6.4:20975975-20975994 | None:intergenic | 30.0% | |
| TATTATTATGAGCGGAAAGA+TGG | + | chr6.4:20972901-20972920 | MS.gene81492:intron | 30.0% | |
| TCATAAGTTCTTCCAAATTG+TGG | + | chr6.4:20974281-20974300 | MS.gene81492:intron | 30.0% | |
| TGATGAAGTGAATGATGTAA+AGG | - | chr6.4:20974846-20974865 | None:intergenic | 30.0% | |
| TTGACTCTGACTTACAAAAT+TGG | + | chr6.4:20973815-20973834 | MS.gene81492:intron | 30.0% | |
| ! | AAATTGCCAGGCTTTAATAT+GGG | + | chr6.4:20976076-20976095 | MS.gene81492:intron | 30.0% |
| ! | GTGTGACTACCTTATTTATT+TGG | + | chr6.4:20974563-20974582 | MS.gene81492:CDS | 30.0% |
| ! | TATAGTGATAATGATGTCCA+GGG | - | chr6.4:20976413-20976432 | None:intergenic | 30.0% |
| ! | TGTTCATTGTTTTCACTGAT+GGG | + | chr6.4:20975287-20975306 | MS.gene81492:intron | 30.0% |
| ! | TTAAGTTGTTTATCCAAGCA+TGG | - | chr6.4:20973752-20973771 | None:intergenic | 30.0% |
| ! | TTGTTCATTGTTTTCACTGA+TGG | + | chr6.4:20975286-20975305 | MS.gene81492:intron | 30.0% |
| ! | TTTAAAATGACGATATGGCA+TGG | - | chr6.4:20974735-20974754 | None:intergenic | 30.0% |
| ! | TTTAGGATGATATTGTCAAG+AGG | + | chr6.4:20976557-20976576 | MS.gene81492:intron | 30.0% |
| ! | TTTGAAGTGAATCATTGTGA+TGG | + | chr6.4:20975553-20975572 | MS.gene81492:intron | 30.0% |
| ! | TTTGTACAAAGGCTTTTTGT+CGG | + | chr6.4:20974533-20974552 | MS.gene81492:CDS | 30.0% |
| !! | TTTTACTTGTTAACAAGCAC+AGG | - | chr6.4:20975693-20975712 | None:intergenic | 30.0% |
| !!! | AGCTATGTTTTGGCTTTAAA+TGG | - | chr6.4:20972872-20972891 | None:intergenic | 30.0% |
| !!! | GCTTTTAGAATTTGTATCAC+AGG | - | chr6.4:20976655-20976674 | None:intergenic | 30.0% |
| !!! | TTACTCTATTGTTTTTGCCA+AGG | + | chr6.4:20975076-20975095 | MS.gene81492:intron | 30.0% |
| AAAACCAAATTGGGATCAAC+CGG | + | chr6.4:20976787-20976806 | MS.gene81492:CDS | 35.0% | |
| AAAATGACTTAAGGGACCAA+AGG | - | chr6.4:20976949-20976968 | None:intergenic | 35.0% | |
| AAATGTAGTTAGTTAGGTGG+TGG | + | chr6.4:20973084-20973103 | MS.gene81492:intron | 35.0% | |
| AACACTTGGCTTACAAGTTA+TGG | - | chr6.4:20975993-20976012 | None:intergenic | 35.0% | |
| AAGAACAAGCTAAACCTATG+AGG | - | chr6.4:20975784-20975803 | None:intergenic | 35.0% | |
| AAGGCACAAGAAAAATCATC+TGG | + | chr6.4:20975095-20975114 | MS.gene81492:intron | 35.0% | |
| ACATCATTCACTTCATCACT+TGG | + | chr6.4:20974848-20974867 | MS.gene81492:intron | 35.0% | |
| ACTTGTAAAAGCAAATTGCC+AGG | + | chr6.4:20976064-20976083 | MS.gene81492:intron | 35.0% | |
| AGAGGAAACTTCATTGGATA+TGG | + | chr6.4:20975139-20975158 | MS.gene81492:CDS | 35.0% | |
| AGGTATTAGAAACTTGGGTT+GGG | + | chr6.4:20974018-20974037 | MS.gene81492:intron | 35.0% | |
| AGTGGCCTACATTAAGTAAA+TGG | - | chr6.4:20975402-20975421 | None:intergenic | 35.0% | |
| AGTTCGTCAAATGTTTCCTA+TGG | - | chr6.4:20977072-20977091 | None:intergenic | 35.0% | |
| ATCAATAACTATTGACCGCT+TGG | - | chr6.4:20975898-20975917 | None:intergenic | 35.0% | |
| CACAGCAAGTACATGTAAAA+TGG | - | chr6.4:20973179-20973198 | None:intergenic | 35.0% | |
| CATTCAGAAATCTGTCACAT+TGG | - | chr6.4:20975372-20975391 | None:intergenic | 35.0% | |
| CTGAAGGGACTAAAATGAAA+CGG | - | chr6.4:20977005-20977024 | None:intergenic | 35.0% | |
| CTGATTACTATGGTACTTGT+CGG | + | chr6.4:20977574-20977593 | MS.gene81492:CDS | 35.0% | |
| CTTTACAGGTCATGCATTAT+GGG | + | chr6.4:20976725-20976744 | MS.gene81492:CDS | 35.0% | |
| GAAAAATCATCTGGAAATGG+TGG | + | chr6.4:20975104-20975123 | MS.gene81492:CDS | 35.0% | |
| GAACTAGGCACTAGTAAATT+AGG | + | chr6.4:20975198-20975217 | MS.gene81492:intron | 35.0% | |
| GAATGGTTTATATCTGACAG+TGG | - | chr6.4:20975458-20975477 | None:intergenic | 35.0% | |
| GACCGTTAATATATTCCCAA+GGG | - | chr6.4:20973453-20973472 | None:intergenic | 35.0% | |
| GAGGATTGAAGAAAGACTTT+CGG | + | chr6.4:20976576-20976595 | MS.gene81492:CDS | 35.0% | |
| GATATGGCATGGAAAAATGA+AGG | - | chr6.4:20974724-20974743 | None:intergenic | 35.0% | |
| GTAATTAGTGTCCAAAGTTC+AGG | - | chr6.4:20976115-20976134 | None:intergenic | 35.0% | |
| TAGGTATTAGAAACTTGGGT+TGG | + | chr6.4:20974017-20974036 | MS.gene81492:intron | 35.0% | |
| TATAAGGCTGAGTAAGAGTT+AGG | - | chr6.4:20974044-20974063 | None:intergenic | 35.0% | |
| TCTTGAAGTTATTCTGACAG+TGG | - | chr6.4:20975420-20975439 | None:intergenic | 35.0% | |
| TCTTGTCAGGAGATGTATTT+AGG | - | chr6.4:20977356-20977375 | None:intergenic | 35.0% | |
| TGGTATTTATAGCCCTTTGT+GGG | + | chr6.4:20973263-20973282 | MS.gene81492:intron | 35.0% | |
| TTCTATACAAGATCGATCAG+TGG | + | chr6.4:20977435-20977454 | MS.gene81492:CDS | 35.0% | |
| TTGAAGAAAGACTTTCGGTT+TGG | + | chr6.4:20976581-20976600 | MS.gene81492:CDS | 35.0% | |
| TTTGTATCACAGGCAAATAC+TGG | - | chr6.4:20976645-20976664 | None:intergenic | 35.0% | |
| ! | AGATGATTTTTCTTGTGCCT+TGG | - | chr6.4:20975096-20975115 | None:intergenic | 35.0% |
| ! | ATAGTGATAATGATGTCCAG+GGG | - | chr6.4:20976412-20976431 | None:intergenic | 35.0% |
| ! | CAAATTGCCAGGCTTTAATA+TGG | + | chr6.4:20976075-20976094 | MS.gene81492:intron | 35.0% |
| ! | CATTTTTCATTCGAGTCCAT+AGG | + | chr6.4:20977053-20977072 | MS.gene81492:intron | 35.0% |
| ! | CTATAGTGATAATGATGTCC+AGG | - | chr6.4:20976414-20976433 | None:intergenic | 35.0% |
| ! | GGCCATATTTTATCCAATGT+TGG | + | chr6.4:20974112-20974131 | MS.gene81492:intron | 35.0% |
| ! | GTTCTACACTGTTCTGTTTT+AGG | + | chr6.4:20976540-20976559 | MS.gene81492:intron | 35.0% |
| ! | GTTTGGACTTTTCTTCCTAA+AGG | + | chr6.4:20976598-20976617 | MS.gene81492:CDS | 35.0% |
| ! | TGTAGGGTCTTTTTGTACAA+AGG | + | chr6.4:20974522-20974541 | MS.gene81492:intron | 35.0% |
| !! | ACATGTACTGATTGTGTCTT+AGG | + | chr6.4:20975834-20975853 | MS.gene81492:intron | 35.0% |
| !! | ACCTCAAAGTCGGTTTTATA+AGG | - | chr6.4:20974060-20974079 | None:intergenic | 35.0% |
| !! | AGGTTGACTTGGTTCTTAAT+TGG | + | chr6.4:20975854-20975873 | MS.gene81492:intron | 35.0% |
| !! | TTCTTGTTCCTTTTGCTGTA+GGG | + | chr6.4:20974506-20974525 | MS.gene81492:intron | 35.0% |
| !! | TTTCTTGTTCCTTTTGCTGT+AGG | + | chr6.4:20974505-20974524 | MS.gene81492:intron | 35.0% |
| !!! | ACATTTTTGGGTTGAGATCT+AGG | + | chr6.4:20973998-20974017 | MS.gene81492:intron | 35.0% |
| !!! | TGGTCCCTTAAGTCATTTTT+AGG | + | chr6.4:20976950-20976969 | MS.gene81492:intron | 35.0% |
| AAGATGATAGTTGTCCAGCT+TGG | + | chr6.4:20977502-20977521 | MS.gene81492:CDS | 40.0% | |
| AAGTAAACGGACCCTAAGAA+TGG | - | chr6.4:20975475-20975494 | None:intergenic | 40.0% | |
| AAGTGCTAAGAGTCCAACAT+TGG | - | chr6.4:20974128-20974147 | None:intergenic | 40.0% | |
| AGAACTGCATTCCCTTTAAC+TGG | - | chr6.4:20977318-20977337 | None:intergenic | 40.0% | |
| AGAATCACTGTTGCCATCAA+AGG | - | chr6.4:20976814-20976833 | None:intergenic | 40.0% | |
| AGATGATAGTTGTCCAGCTT+GGG | + | chr6.4:20977503-20977522 | MS.gene81492:CDS | 40.0% | |
| AGGGCTATAAATACCACTCT+TGG | - | chr6.4:20973259-20973278 | None:intergenic | 40.0% | |
| AGGTTCTCCAACCAGTTAAA+GGG | + | chr6.4:20977304-20977323 | MS.gene81492:CDS | 40.0% | |
| ATACAAGATCGATCAGTGGA+GGG | + | chr6.4:20977439-20977458 | MS.gene81492:CDS | 40.0% | |
| ATCTCTCGAATGCTACTCAA+GGG | + | chr6.4:20976836-20976855 | MS.gene81492:CDS | 40.0% | |
| ATGGGCTTGAAAAAGATAGG+CGG | + | chr6.4:20976743-20976762 | MS.gene81492:CDS | 40.0% | |
| CAAAAAGACCCTACAGCAAA+AGG | - | chr6.4:20974517-20974536 | None:intergenic | 40.0% | |
| CACTCTTGGAATCATTCTCA+AGG | - | chr6.4:20973245-20973264 | None:intergenic | 40.0% | |
| CCATAATGCATGACCTGTAA+AGG | - | chr6.4:20976727-20976746 | None:intergenic | 40.0% | |
| CCTTTACAGGTCATGCATTA+TGG | + | chr6.4:20976724-20976743 | MS.gene81492:CDS | 40.0% | |
| CGACAAGTACCATAGTAATC+AGG | - | chr6.4:20977576-20977595 | None:intergenic | 40.0% | |
| CTTGAGAATGATTCCAAGAG+TGG | + | chr6.4:20973243-20973262 | MS.gene81492:intron | 40.0% | |
| GAAAACCTTCACCTCAAAGT+CGG | - | chr6.4:20974070-20974089 | None:intergenic | 40.0% | |
| GGACCGTTAATATATTCCCA+AGG | - | chr6.4:20973454-20973473 | None:intergenic | 40.0% | |
| GGCCCTTGGGAATATATTAA+CGG | + | chr6.4:20973448-20973467 | MS.gene81492:intron | 40.0% | |
| GTGGTATTTATAGCCCTTTG+TGG | + | chr6.4:20973262-20973281 | MS.gene81492:intron | 40.0% | |
| GTTGGATCTCCTGATTACTA+TGG | + | chr6.4:20977564-20977583 | MS.gene81492:CDS | 40.0% | |
| TATACAAGATCGATCAGTGG+AGG | + | chr6.4:20977438-20977457 | MS.gene81492:CDS | 40.0% | |
| TATTGACCGCTTGGTAGAAA+AGG | - | chr6.4:20975889-20975908 | None:intergenic | 40.0% | |
| TCATTGCTGCAACCACAATT+TGG | - | chr6.4:20974296-20974315 | None:intergenic | 40.0% | |
| TGGGAAAAAACCCTGAACTT+TGG | + | chr6.4:20976101-20976120 | MS.gene81492:intron | 40.0% | |
| TGGTGGCTATTCAAAGAAAG+AGG | + | chr6.4:20975121-20975140 | MS.gene81492:CDS | 40.0% | |
| TTGGTATGTTGCAGTCTCAT+TGG | + | chr6.4:20974582-20974601 | MS.gene81492:intron | 40.0% | |
| ! | ACATATCGCCTTTAAGGACA+GGG | - | chr6.4:20977398-20977417 | None:intergenic | 40.0% |
| ! | AGTTAGGTGGTGGTTAACTT+TGG | + | chr6.4:20973094-20973113 | MS.gene81492:intron | 40.0% |
| ! | ATGCTTCTAGAAGCTGACTA+AGG | + | chr6.4:20973349-20973368 | MS.gene81492:intron | 40.0% |
| ! | ATGTTGCAGTCTCATTGGTT+TGG | + | chr6.4:20974587-20974606 | MS.gene81492:intron | 40.0% |
| ! | CAAAGGCTTTTTGTCGGATA+AGG | + | chr6.4:20974539-20974558 | MS.gene81492:CDS | 40.0% |
| ! | CCAGGCTTTAATATGGGATT+GGG | + | chr6.4:20976082-20976101 | MS.gene81492:intron | 40.0% |
| ! | GCCTTATAAAACCGACTTTG+AGG | + | chr6.4:20974056-20974075 | MS.gene81492:intron | 40.0% |
| ! | GCTTCGTGATTCTTGATAGT+GGG | + | chr6.4:20974324-20974343 | MS.gene81492:intron | 40.0% |
| !! | CTTCGTGATTCTTGATAGTG+GGG | + | chr6.4:20974325-20974344 | MS.gene81492:intron | 40.0% |
| !! | GATTGTGTCTTAGGTTGACT+TGG | + | chr6.4:20975843-20975862 | MS.gene81492:intron | 40.0% |
| !! | TAAAACCGACTTTGAGGTGA+AGG | + | chr6.4:20974062-20974081 | MS.gene81492:intron | 40.0% |
| !! | TTCTAGAAGCATCTAGAAGC+AGG | - | chr6.4:20973341-20973360 | None:intergenic | 40.0% |
| !! | TTGAAGAAAGTACCTGACCT+TGG | - | chr6.4:20972742-20972761 | None:intergenic | 40.0% |
| AACCCTCTTTCCTGAATCAG+TGG | + | chr6.4:20976864-20976883 | MS.gene81492:CDS | 45.0% | |
| ACCTTGGTTGCCAAGAGATT+TGG | - | chr6.4:20972726-20972745 | None:intergenic | 45.0% | |
| ACTTAAGCTCCAAGCAAGCT+GGG | + | chr6.4:20973300-20973319 | MS.gene81492:intron | 45.0% | |
| AGAGAACAGCAAGCCTTTAC+AGG | + | chr6.4:20976711-20976730 | MS.gene81492:intron | 45.0% | |
| AGGGAAAGTCTCAATTACGC+TGG | + | chr6.4:20977458-20977477 | MS.gene81492:CDS | 45.0% | |
| ATCACAGGCAAATACTGGTG+TGG | - | chr6.4:20976640-20976659 | None:intergenic | 45.0% | |
| ATTTATAGCCCTTTGTGGGC+TGG | + | chr6.4:20973267-20973286 | MS.gene81492:intron | 45.0% | |
| ATTTGACCAGCTGCTACTCT+TGG | - | chr6.4:20977268-20977287 | None:intergenic | 45.0% | |
| CAAGAATCACGAAGCGATTG+TGG | - | chr6.4:20974319-20974338 | None:intergenic | 45.0% | |
| CACGTGTTGTCCAAATCTCT+TGG | + | chr6.4:20972713-20972732 | MS.gene81492:CDS | 45.0% | |
| CAGACCACATATCGCCTTTA+AGG | - | chr6.4:20977404-20977423 | None:intergenic | 45.0% | |
| CATCTCTCGAATGCTACTCA+AGG | + | chr6.4:20976835-20976854 | MS.gene81492:CDS | 45.0% | |
| CCCAATCCCATATTAAAGCC+TGG | - | chr6.4:20976085-20976104 | None:intergenic | 45.0% | |
| CGCTTCGTGATTCTTGATAG+TGG | + | chr6.4:20974323-20974342 | MS.gene81492:intron | 45.0% | |
| CTGCATTCCCTTTAACTGGT+TGG | - | chr6.4:20977314-20977333 | None:intergenic | 45.0% | |
| CTGTCCTTAAAGGCGATATG+TGG | + | chr6.4:20977397-20977416 | MS.gene81492:CDS | 45.0% | |
| CTTTAAATGGACCCCTCAAG+TGG | - | chr6.4:20972859-20972878 | None:intergenic | 45.0% | |
| GAGATCCAACCATGTAGACA+GGG | - | chr6.4:20977554-20977573 | None:intergenic | 45.0% | |
| GAGATTTGGACAACACGTGA+AGG | - | chr6.4:20972712-20972731 | None:intergenic | 45.0% | |
| GAGGTTCTCCAACCAGTTAA+AGG | + | chr6.4:20977303-20977322 | MS.gene81492:CDS | 45.0% | |
| GCTCTTACGTTTCACCTCAT+AGG | + | chr6.4:20975767-20975786 | MS.gene81492:intron | 45.0% | |
| GGGGTGATGTGGCAAAATAA+AGG | + | chr6.4:20974772-20974791 | MS.gene81492:intron | 45.0% | |
| GTGGTTGCATCAGCCATATT+TGG | + | chr6.4:20976328-20976347 | MS.gene81492:intron | 45.0% | |
| GTTACAAATGTGGGGTGATG+TGG | + | chr6.4:20974761-20974780 | MS.gene81492:intron | 45.0% | |
| TCCAAATCTCTTGGCAACCA+AGG | + | chr6.4:20972722-20972741 | MS.gene81492:CDS | 45.0% | |
| TCCTGAATCAGTGGTGAGTA+CGG | + | chr6.4:20976873-20976892 | MS.gene81492:intron | 45.0% | |
| TCTCTCGAATGCTACTCAAG+GGG | + | chr6.4:20976837-20976856 | MS.gene81492:CDS | 45.0% | |
| TGGACCATCTGCATTCCTAA+AGG | - | chr6.4:20973657-20973676 | None:intergenic | 45.0% | |
| ! | CACATATCGCCTTTAAGGAC+AGG | - | chr6.4:20977399-20977418 | None:intergenic | 45.0% |
| ! | CTTCTAGAAGCTGACTAAGG+CGG | + | chr6.4:20973352-20973371 | MS.gene81492:intron | 45.0% |
| ! | GCCAGGCTTTAATATGGGAT+TGG | + | chr6.4:20976081-20976100 | MS.gene81492:intron | 45.0% |
| ! | GTGCTTTCAGATGCTTGCTA+GGG | + | chr6.4:20973572-20973591 | MS.gene81492:intron | 45.0% |
| ! | TGCTTTCAGATGCTTGCTAG+GGG | + | chr6.4:20973573-20973592 | MS.gene81492:intron | 45.0% |
| ! | TGTGCCTTTAGGAATGCAGA+TGG | + | chr6.4:20973650-20973669 | MS.gene81492:intron | 45.0% |
| !! | CACCACTGATTCAGGAAAGA+GGG | - | chr6.4:20976869-20976888 | None:intergenic | 45.0% |
| !! | TCACCACTGATTCAGGAAAG+AGG | - | chr6.4:20976870-20976889 | None:intergenic | 45.0% |
| !!! | GAGGTTTTAAACTGTGGTCG+CGG | - | chr6.4:20976390-20976409 | None:intergenic | 45.0% |
| !!! | ATATATATTTTTTTTAAACT+CGG | + | chr6.4:20972792-20972811 | MS.gene81492:intron | 5.0% |
| AAATGGACCCCTCAAGTGGA+CGG | - | chr6.4:20972855-20972874 | None:intergenic | 50.0% | |
| AAGGCACAGATGCCTCAAGA+AGG | - | chr6.4:20973638-20973657 | None:intergenic | 50.0% | |
| AATCTCACCGTCCACTTGAG+GGG | + | chr6.4:20972845-20972864 | MS.gene81492:intron | 50.0% | |
| ACGGTCTGCAATCGCAATTG+TGG | + | chr6.4:20976264-20976283 | MS.gene81492:intron | 50.0% | |
| AGGTCCGGTTGATCCCAATT+TGG | - | chr6.4:20976794-20976813 | None:intergenic | 50.0% | |
| ATCTCTTGGCAACCAAGGTC+AGG | + | chr6.4:20972727-20972746 | MS.gene81492:intron | 50.0% | |
| CAACCACACTGACACAGTCA+CGG | - | chr6.4:20976315-20976334 | None:intergenic | 50.0% | |
| CAAGCATGGCCTCGAATCAT+TGG | - | chr6.4:20973738-20973757 | None:intergenic | 50.0% | |
| CAATCTCACCGTCCACTTGA+GGG | + | chr6.4:20972844-20972863 | MS.gene81492:intron | 50.0% | |
| CAATGATTCGAGGCCATGCT+TGG | + | chr6.4:20973736-20973755 | MS.gene81492:intron | 50.0% | |
| CACTGTTGCCATCAAAGGTC+CGG | - | chr6.4:20976809-20976828 | None:intergenic | 50.0% | |
| CAGAATGGCTCCAAAGGACT+AGG | - | chr6.4:20973396-20973415 | None:intergenic | 50.0% | |
| CAGCAACGGGAGAATGTCAA+CGG | + | chr6.4:20977526-20977545 | MS.gene81492:CDS | 50.0% | |
| CGGCGAACCGACTAATTTGA+TGG | + | chr6.4:20972819-20972838 | MS.gene81492:intron | 50.0% | |
| CGTGCTTTCAGATGCTTGCT+AGG | + | chr6.4:20973571-20973590 | MS.gene81492:intron | 50.0% | |
| CTCTCGAATGCTACTCAAGG+GGG | + | chr6.4:20976838-20976857 | MS.gene81492:CDS | 50.0% | |
| GACTTAAGCTCCAAGCAAGC+TGG | + | chr6.4:20973299-20973318 | MS.gene81492:intron | 50.0% | |
| GCGTGTAAGCTACTCTTGTC+AGG | - | chr6.4:20977369-20977388 | None:intergenic | 50.0% | |
| GGAGATCCAACCATGTAGAC+AGG | - | chr6.4:20977555-20977574 | None:intergenic | 50.0% | |
| TAAGCACGAGTCTTGGGACA+AGG | + | chr6.4:20973483-20973502 | MS.gene81492:intron | 50.0% | |
| TCAACGGAACCCTGTCTACA+TGG | + | chr6.4:20977542-20977561 | MS.gene81492:CDS | 50.0% | |
| TCAATCTCACCGTCCACTTG+AGG | + | chr6.4:20972843-20972862 | MS.gene81492:intron | 50.0% | |
| TGCAATCGCAATTGTGGCTG+CGG | + | chr6.4:20976270-20976289 | MS.gene81492:intron | 50.0% | |
| TGTAGGTCCTAACCTGCTCT+CGG | + | chr6.4:20976202-20976221 | MS.gene81492:intron | 50.0% | |
| TGTCCCAAGACTCGTGCTTA+GGG | - | chr6.4:20973483-20973502 | None:intergenic | 50.0% | |
| TTGTCCCAAGACTCGTGCTT+AGG | - | chr6.4:20973484-20973503 | None:intergenic | 50.0% | |
| TTTAAACTGTGGTCGCGGTC+CGG | - | chr6.4:20976385-20976404 | None:intergenic | 50.0% | |
| TTTCCGTGACTGTGTCAGTG+TGG | + | chr6.4:20976309-20976328 | MS.gene81492:intron | 50.0% | |
| ! | CCACAGTTTAAAACCTCCCC+TGG | + | chr6.4:20976393-20976412 | MS.gene81492:intron | 50.0% |
| ! | CCAGAGCCTTTTCTACCAAG+CGG | + | chr6.4:20975880-20975899 | MS.gene81492:intron | 50.0% |
| ! | CTTGAGGCATCTGTGCCTTT+AGG | + | chr6.4:20973639-20973658 | MS.gene81492:intron | 50.0% |
| ! | GATCTAAAGCCCAGCTTGCT+TGG | - | chr6.4:20973312-20973331 | None:intergenic | 50.0% |
| ! | GCTTTCAGATGCTTGCTAGG+GGG | + | chr6.4:20973574-20973593 | MS.gene81492:intron | 50.0% |
| ! | GTGATAATGATGTCCAGGGG+AGG | - | chr6.4:20976409-20976428 | None:intergenic | 50.0% |
| !! | CTAGTCCTTTGGAGCCATTC+TGG | + | chr6.4:20973394-20973413 | MS.gene81492:intron | 50.0% |
| !! | TCCTTTGGAGCCATTCTGGA+GGG | + | chr6.4:20973398-20973417 | MS.gene81492:intron | 50.0% |
| !!! | CCAGGGGAGGTTTTAAACTG+TGG | - | chr6.4:20976396-20976415 | None:intergenic | 50.0% |
| AAAGCCCTCCAGAAAGGCTC+AGG | - | chr6.4:20973426-20973445 | None:intergenic | 55.0% | |
| AAGAAGGCTCCCTGAAGCTC+GGG | - | chr6.4:20973622-20973641 | None:intergenic | 55.0% | |
| ACGCTGTAACCAGCCCACAA+AGG | - | chr6.4:20973279-20973298 | None:intergenic | 55.0% | |
| AGCTTCAGGGAGCCTTCTTG+AGG | + | chr6.4:20973623-20973642 | MS.gene81492:intron | 55.0% | |
| CAAGAAGGCTCCCTGAAGCT+CGG | - | chr6.4:20973623-20973642 | None:intergenic | 55.0% | |
| CACAGACCAAGAGTAGCAGC+TGG | + | chr6.4:20977259-20977278 | MS.gene81492:intron | 55.0% | |
| CAGCTGCTACTCTTGGTCTG+TGG | - | chr6.4:20977261-20977280 | None:intergenic | 55.0% | |
| CAGTTGGGCAACCTGCTATC+AGG | - | chr6.4:20973967-20973986 | None:intergenic | 55.0% | |
| CCGCTTGGTAGAAAAGGCTC+TGG | - | chr6.4:20975883-20975902 | None:intergenic | 55.0% | |
| CGCTGTAACCAGCCCACAAA+GGG | - | chr6.4:20973278-20973297 | None:intergenic | 55.0% | |
| CGGAACCCTGTCTACATGGT+TGG | + | chr6.4:20977546-20977565 | MS.gene81492:CDS | 55.0% | |
| GCTATCAGGTCACCGCTATC+AGG | - | chr6.4:20973953-20973972 | None:intergenic | 55.0% | |
| GCTCGATGCCCTGTCCTTAA+AGG | + | chr6.4:20977387-20977406 | MS.gene81492:CDS | 55.0% | |
| GGGATCAACCGGACCTTTGA+TGG | + | chr6.4:20976798-20976817 | MS.gene81492:CDS | 55.0% | |
| GTCACCGCTATCAGGTCACT+CGG | - | chr6.4:20973945-20973964 | None:intergenic | 55.0% | |
| GTCCCAAGACTCGTGCTTAG+GGG | - | chr6.4:20973482-20973501 | None:intergenic | 55.0% | |
| TCACCGCTATCAGGTCACTC+GGG | - | chr6.4:20973944-20973963 | None:intergenic | 55.0% | |
| TCCCAAGACTCGTGCTTAGG+GGG | - | chr6.4:20973481-20973500 | None:intergenic | 55.0% | |
| TTGTCCAGCTTGGGCAGCAA+CGG | + | chr6.4:20977512-20977531 | MS.gene81492:CDS | 55.0% | |
| ! | AGCCTTTCTGGAGGGCTTTC+AGG | + | chr6.4:20973427-20973446 | MS.gene81492:intron | 55.0% |
| ! | GATAGCGGTGACCTGATAGC+AGG | + | chr6.4:20973953-20973972 | MS.gene81492:intron | 55.0% |
| ! | GCAGGTTGCCCAACTGATTC+TGG | + | chr6.4:20973971-20973990 | MS.gene81492:intron | 55.0% |
| ! | TTCAGATGCTTGCTAGGGGG+CGG | + | chr6.4:20973577-20973596 | MS.gene81492:intron | 55.0% |
| !! | GCCGTACTCACCACTGATTC+AGG | - | chr6.4:20976877-20976896 | None:intergenic | 55.0% |
| !! | GTCCTTTGGAGCCATTCTGG+AGG | + | chr6.4:20973397-20973416 | MS.gene81492:intron | 55.0% |
| ACTCGGGCCATGCTCCAGAT+GGG | - | chr6.4:20973928-20973947 | None:intergenic | 60.0% | |
| AGCAGAGCCGAGAGCAGGTT+AGG | - | chr6.4:20976212-20976231 | None:intergenic | 60.0% | |
| AGCCCCCTAAGCACGAGTCT+TGG | + | chr6.4:20973476-20973495 | MS.gene81492:intron | 60.0% | |
| AGGGACACACCCGAGCTTCA+GGG | + | chr6.4:20973610-20973629 | MS.gene81492:intron | 60.0% | |
| ATGCTCCAGATGGGCGTGAG+GGG | - | chr6.4:20973919-20973938 | None:intergenic | 60.0% | |
| CAAACAGCAGAGCCGAGAGC+AGG | - | chr6.4:20976217-20976236 | None:intergenic | 60.0% | |
| CATGCTCCAGATGGGCGTGA+GGG | - | chr6.4:20973920-20973939 | None:intergenic | 60.0% | |
| GAGCGGAAAGATGGACGCGT+GGG | + | chr6.4:20972910-20972929 | MS.gene81492:intron | 60.0% | |
| GCCCCCTAAGCACGAGTCTT+GGG | + | chr6.4:20973477-20973496 | MS.gene81492:intron | 60.0% | |
| GCCCTCCAGAATGGCTCCAA+AGG | - | chr6.4:20973402-20973421 | None:intergenic | 60.0% | |
| GGCCTGAAAGCCCTCCAGAA+AGG | - | chr6.4:20973432-20973451 | None:intergenic | 60.0% | |
| TGAGCGGAAAGATGGACGCG+TGG | + | chr6.4:20972909-20972928 | MS.gene81492:intron | 60.0% | |
| TGGAGGGCTTTCAGGCCCTT+GGG | + | chr6.4:20973435-20973454 | MS.gene81492:intron | 60.0% | |
| TGGCCCGAGTGACCTGATAG+CGG | + | chr6.4:20973938-20973957 | MS.gene81492:intron | 60.0% | |
| TGTCCAGCTTGGGCAGCAAC+GGG | + | chr6.4:20977513-20977532 | MS.gene81492:CDS | 60.0% | |
| ACTAAGGCGGCGCCTCTGGA+AGG | + | chr6.4:20973365-20973384 | MS.gene81492:intron | 65.0% | |
| CACTCGGGCCATGCTCCAGA+TGG | - | chr6.4:20973929-20973948 | None:intergenic | 65.0% | |
| CCATGCTCCAGATGGGCGTG+AGG | - | chr6.4:20973921-20973940 | None:intergenic | 65.0% | |
| CTGGAGGGCTTTCAGGCCCT+TGG | + | chr6.4:20973434-20973453 | MS.gene81492:intron | 65.0% | |
| GACTCGTGCTTAGGGGGCTG+TGG | - | chr6.4:20973475-20973494 | None:intergenic | 65.0% | |
| GAGGGACACACCCGAGCTTC+AGG | + | chr6.4:20973609-20973628 | MS.gene81492:intron | 65.0% | |
| GGCGCCTGAGCCTTTCTGGA+GGG | + | chr6.4:20973419-20973438 | MS.gene81492:intron | 65.0% | |
| TACACCCCCTCACGCCCATC+TGG | + | chr6.4:20973911-20973930 | MS.gene81492:intron | 65.0% | |
| TCTCCCGTTGCTGCCCAAGC+TGG | - | chr6.4:20977519-20977538 | None:intergenic | 65.0% | |
| TGCTCCAGATGGGCGTGAGG+GGG | - | chr6.4:20973918-20973937 | None:intergenic | 65.0% | |
| ! | CCTCACGCCCATCTGGAGCA+TGG | + | chr6.4:20973918-20973937 | MS.gene81492:intron | 65.0% |
| ! | CTAAGGCGGCGCCTCTGGAA+GGG | + | chr6.4:20973366-20973385 | MS.gene81492:intron | 65.0% |
| ! | GAAGGGCGCGCCTAGTCCTT+TGG | + | chr6.4:20973383-20973402 | MS.gene81492:intron | 65.0% |
| CTCGGGTGTGTCCCTCCGAG+AGG | - | chr6.4:20973605-20973624 | None:intergenic | 70.0% | |
| GACTAGGCGCGCCCTTCCAG+AGG | - | chr6.4:20973380-20973399 | None:intergenic | 70.0% | |
| GCTGACTAAGGCGGCGCCTC+TGG | + | chr6.4:20973361-20973380 | MS.gene81492:intron | 70.0% | |
| GGCTCAGGCGCCCTCCAGAA+TGG | - | chr6.4:20973411-20973430 | None:intergenic | 70.0% | |
| GGGCGCCTGAGCCTTTCTGG+AGG | + | chr6.4:20973418-20973437 | MS.gene81492:intron | 70.0% | |
| TGCTAGGGGGCGGTGCCTCT+CGG | + | chr6.4:20973587-20973606 | MS.gene81492:intron | 70.0% | |
| !! | GGAGGGCGCCTGAGCCTTTC+TGG | + | chr6.4:20973415-20973434 | MS.gene81492:intron | 70.0% |
| AGGGGGCGGTGCCTCTCGGA+GGG | + | chr6.4:20973591-20973610 | MS.gene81492:intron | 75.0% | |
| TAGGGGGCGGTGCCTCTCGG+AGG | + | chr6.4:20973590-20973609 | MS.gene81492:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 20972630 | 20977617 | 20972630 | ID=MS.gene81492 |
| chr6.4 | mRNA | 20972630 | 20977617 | 20972630 | ID=MS.gene81492.t1;Parent=MS.gene81492 |
| chr6.4 | exon | 20972630 | 20972743 | 20972630 | ID=MS.gene81492.t1.exon1;Parent=MS.gene81492.t1 |
| chr6.4 | CDS | 20972630 | 20972743 | 20972630 | ID=cds.MS.gene81492.t1;Parent=MS.gene81492.t1 |
| chr6.4 | exon | 20974527 | 20974584 | 20974527 | ID=MS.gene81492.t1.exon2;Parent=MS.gene81492.t1 |
| chr6.4 | CDS | 20974527 | 20974584 | 20974527 | ID=cds.MS.gene81492.t1;Parent=MS.gene81492.t1 |
| chr6.4 | exon | 20975098 | 20975163 | 20975098 | ID=MS.gene81492.t1.exon3;Parent=MS.gene81492.t1 |
| chr6.4 | CDS | 20975098 | 20975163 | 20975098 | ID=cds.MS.gene81492.t1;Parent=MS.gene81492.t1 |
| chr6.4 | exon | 20976562 | 20976619 | 20976562 | ID=MS.gene81492.t1.exon4;Parent=MS.gene81492.t1 |
| chr6.4 | CDS | 20976562 | 20976619 | 20976562 | ID=cds.MS.gene81492.t1;Parent=MS.gene81492.t1 |
| chr6.4 | exon | 20976713 | 20976885 | 20976713 | ID=MS.gene81492.t1.exon5;Parent=MS.gene81492.t1 |
| chr6.4 | CDS | 20976713 | 20976885 | 20976713 | ID=cds.MS.gene81492.t1;Parent=MS.gene81492.t1 |
| chr6.4 | exon | 20977264 | 20977617 | 20977264 | ID=MS.gene81492.t1.exon6;Parent=MS.gene81492.t1 |
| chr6.4 | CDS | 20977264 | 20977617 | 20977264 | ID=cds.MS.gene81492.t1;Parent=MS.gene81492.t1 |
| Gene Sequence |
| Protein sequence |
