Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81572.t1 | XP_003616976.1 | 98.2 | 571 | 10 | 0 | 1 | 571 | 1 | 571 | 2.40E-305 | 1057.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81572.t1 | Q92890 | 38.3 | 180 | 92 | 3 | 91 | 270 | 43 | 203 | 1.6e-23 | 112.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81572.t1 | G7KCM5 | 98.2 | 571 | 10 | 0 | 1 | 571 | 1 | 571 | 1.7e-305 | 1057.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049983 | MS.gene81572 | 0.824993 | 5.97E-54 | -1.69E-46 |
| MS.gene050085 | MS.gene81572 | 0.804919 | 1.71E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene81572 | 0.817415 | 3.34E-52 | -1.69E-46 |
| MS.gene051209 | MS.gene81572 | 0.826857 | 2.15E-54 | -1.69E-46 |
| MS.gene053058 | MS.gene81572 | 0.804695 | 1.91E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene81572 | 0.823252 | 1.53E-53 | -1.69E-46 |
| MS.gene056181 | MS.gene81572 | 0.811408 | 7.11E-51 | -1.69E-46 |
| MS.gene058292 | MS.gene81572 | 0.805371 | 1.38E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81572.t1 | MTR_5g086350 | 98.249 | 571 | 10 | 0 | 1 | 571 | 1 | 571 | 0.0 | 1167 |
| MS.gene81572.t1 | MTR_8g105250 | 37.569 | 181 | 86 | 4 | 90 | 266 | 32 | 189 | 1.44e-27 | 113 |
| MS.gene81572.t1 | MTR_4g064260 | 36.464 | 181 | 96 | 3 | 86 | 266 | 108 | 269 | 3.92e-25 | 107 |
| MS.gene81572.t1 | MTR_4g064300 | 37.017 | 181 | 95 | 3 | 86 | 266 | 138 | 299 | 4.82e-25 | 108 |
| MS.gene81572.t1 | MTR_4g064330 | 35.359 | 181 | 98 | 3 | 86 | 266 | 105 | 266 | 5.31e-23 | 101 |
| MS.gene81572.t1 | MTR_3g111440 | 29.032 | 155 | 78 | 4 | 411 | 564 | 9 | 132 | 1.10e-14 | 72.0 |
| MS.gene81572.t1 | MTR_3g111440 | 28.846 | 156 | 79 | 4 | 411 | 565 | 9 | 133 | 3.57e-12 | 65.9 |
| MS.gene81572.t1 | MTR_5g066840 | 28.387 | 155 | 79 | 5 | 411 | 564 | 9 | 132 | 1.70e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81572.t1 | AT4G15420 | 65.324 | 571 | 185 | 4 | 1 | 570 | 124 | 682 | 0.0 | 800 |
| MS.gene81572.t1 | AT4G15420 | 65.324 | 571 | 185 | 4 | 1 | 570 | 1 | 559 | 0.0 | 796 |
| MS.gene81572.t1 | AT2G29070 | 41.711 | 187 | 88 | 4 | 91 | 276 | 28 | 194 | 5.22e-32 | 126 |
| MS.gene81572.t1 | AT2G29070 | 40.659 | 182 | 87 | 4 | 96 | 276 | 1 | 162 | 6.16e-30 | 119 |
| MS.gene81572.t1 | AT2G21270 | 39.888 | 178 | 86 | 6 | 90 | 266 | 32 | 189 | 2.26e-29 | 119 |
| MS.gene81572.t1 | AT2G21270 | 39.888 | 178 | 86 | 6 | 90 | 266 | 32 | 189 | 2.26e-29 | 119 |
| MS.gene81572.t1 | AT2G21270 | 39.888 | 178 | 86 | 6 | 90 | 266 | 32 | 189 | 2.26e-29 | 119 |
| MS.gene81572.t1 | AT2G21270 | 39.888 | 178 | 86 | 6 | 90 | 266 | 32 | 189 | 2.26e-29 | 119 |
| MS.gene81572.t1 | AT4G38930 | 38.503 | 187 | 96 | 4 | 90 | 276 | 32 | 199 | 2.85e-29 | 118 |
| MS.gene81572.t1 | AT4G38930 | 38.503 | 187 | 96 | 4 | 90 | 276 | 32 | 199 | 2.85e-29 | 118 |
| MS.gene81572.t1 | AT4G38930 | 38.503 | 187 | 96 | 4 | 90 | 276 | 32 | 199 | 3.23e-29 | 118 |
| MS.gene81572.t1 | AT4G38930 | 38.503 | 187 | 96 | 4 | 90 | 276 | 32 | 199 | 3.23e-29 | 118 |
| MS.gene81572.t1 | AT2G21270 | 39.548 | 177 | 88 | 5 | 90 | 266 | 53 | 210 | 3.86e-29 | 118 |
| MS.gene81572.t1 | AT1G09920 | 29.193 | 161 | 82 | 3 | 405 | 564 | 3 | 132 | 5.51e-13 | 68.2 |
| MS.gene81572.t1 | AT2G29070 | 42.647 | 68 | 39 | 0 | 209 | 276 | 11 | 78 | 7.77e-12 | 65.1 |
Find 119 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGAAAATCCTCCTCTTTC+AGG | 0.143052 | 5.1:-68301219 | None:intergenic |
| GAAAACTTGAACACAAATTA+AGG | 0.198776 | 5.1:+68301328 | MS.gene81572:CDS |
| GTAAGCATTACATACCTTCT+AGG | 0.232572 | 5.1:+68301889 | MS.gene81572:CDS |
| CAATTCCCCTCCCAACAATT+AGG | 0.264309 | 5.1:-68300846 | None:intergenic |
| ATTGGTGTAAACGGATTTAA+AGG | 0.282536 | 5.1:+68301750 | MS.gene81572:CDS |
| GACTTTGATTCTCAGCTCTA+AGG | 0.312180 | 5.1:+68301698 | MS.gene81572:CDS |
| AGCTTTCCAGCAGGCAGAAT+TGG | 0.313607 | 5.1:+68302034 | MS.gene81572:CDS |
| AGTACTTGAGAAAGAGAAAA+TGG | 0.328339 | 5.1:+68302106 | MS.gene81572:CDS |
| TTGTTTCGAGGATTGCCTTA+TGG | 0.381012 | 5.1:-68301251 | None:intergenic |
| TGATTGAAGTCCGCTATGTT+TGG | 0.387670 | 5.1:+68301166 | MS.gene81572:CDS |
| GAGTGGTCTTCTCATGATAT+TGG | 0.388666 | 5.1:+68301669 | MS.gene81572:CDS |
| TCGAGGATTGCCTTATGGTT+TGG | 0.390171 | 5.1:-68301246 | None:intergenic |
| CGCTATGTTTGGCTTCCAAA+AGG | 0.401774 | 5.1:+68301177 | MS.gene81572:CDS |
| ATCATCTTCCGTGTCATCAA+TGG | 0.403538 | 5.1:+68301839 | MS.gene81572:CDS |
| TTCTGATTTACCAAACCATA+AGG | 0.405158 | 5.1:+68301236 | MS.gene81572:CDS |
| TCATCTTCCGTGTCATCAAT+GGG | 0.426538 | 5.1:+68301840 | MS.gene81572:CDS |
| AAAACGGGAACAACCCATTC+AGG | 0.427142 | 5.1:+68301048 | MS.gene81572:CDS |
| TGAATTCTAAAACTCCTGAA+TGG | 0.430305 | 5.1:-68301062 | None:intergenic |
| TGGGTCTCCCTCCTCATGTA+TGG | 0.432563 | 5.1:+68301103 | MS.gene81572:CDS |
| ATGCAAGAAAACCTAATTGT+TGG | 0.432810 | 5.1:+68300835 | MS.gene81572:CDS |
| AGATCTTTGAGCAGCTTCAA+TGG | 0.438447 | 5.1:-68299810 | None:intergenic |
| AGATACTGACAAAGAGAAAA+CGG | 0.442108 | 5.1:+68301032 | MS.gene81572:CDS |
| ACTTACAGCATTGGTGTAAA+CGG | 0.442128 | 5.1:+68301741 | MS.gene81572:CDS |
| TGGAGTTGTTCTTAGAATTG+AGG | 0.446426 | 5.1:+68301974 | MS.gene81572:CDS |
| TGATCATGGTGCGCTTGATA+AGG | 0.448669 | 5.1:+68300954 | MS.gene81572:CDS |
| TGCAAGAAAACCTAATTGTT+GGG | 0.448899 | 5.1:+68300836 | MS.gene81572:CDS |
| TCAGAGCACGAGAGTGTTTG+TGG | 0.455532 | 5.1:+68304338 | MS.gene81572:CDS |
| TAGTGGGAGTTCTATTATTG+AGG | 0.459089 | 5.1:+68301560 | MS.gene81572:CDS |
| CTGGAAGCTGTACCTTATCA+AGG | 0.459105 | 5.1:+68300883 | MS.gene81572:CDS |
| GTCTGTTCTGAGAAATCAAT+AGG | 0.467366 | 5.1:-68301420 | None:intergenic |
| TTTACAGAATTGTCTGATCA+TGG | 0.469703 | 5.1:+68300940 | MS.gene81572:CDS |
| GATCATGGTGCGCTTGATAA+GGG | 0.473109 | 5.1:+68300955 | MS.gene81572:CDS |
| GATGCCCGTGACAGGTTAAG+AGG | 0.475693 | 5.1:+68304311 | MS.gene81572:CDS |
| TGTAGTGCAATAGTCCTAGA+AGG | 0.476451 | 5.1:-68301903 | None:intergenic |
| TGTGGAGTTCCAAATACTGC+TGG | 0.478895 | 5.1:-68301462 | None:intergenic |
| AAAACTTGAACACAAATTAA+GGG | 0.484583 | 5.1:+68301329 | MS.gene81572:CDS |
| GAATTCTAAAACTCCTGAAT+GGG | 0.487644 | 5.1:-68301061 | None:intergenic |
| TAAGACTGTTAGTTTGTACT+TGG | 0.490990 | 5.1:-68301778 | None:intergenic |
| GCTGCCGAAGACTTGTTTCG+AGG | 0.494454 | 5.1:-68301263 | None:intergenic |
| AAAATCACATTCACTGTGGC+AGG | 0.496690 | 5.1:+68302003 | MS.gene81572:CDS |
| ACCTGTCAGCATGAAGGTTG+TGG | 0.498331 | 5.1:+68301954 | MS.gene81572:CDS |
| TTCAGTGATGTTGAAGGAGA+TGG | 0.500517 | 5.1:+68304394 | MS.gene81572:CDS |
| CAATCCTCGAAACAAGTCTT+CGG | 0.502772 | 5.1:+68301259 | MS.gene81572:CDS |
| CTGCAATGGATGCCCGTGAC+AGG | 0.502869 | 5.1:+68304303 | MS.gene81572:CDS |
| GATACTGACAAAGAGAAAAC+GGG | 0.504593 | 5.1:+68301033 | MS.gene81572:CDS |
| TTCATCAAGTGTATCGGTGT+TGG | 0.510825 | 5.1:+68301368 | MS.gene81572:CDS |
| CTTTCCTTCATCTACTGTAC+CGG | 0.511128 | 5.1:-68301487 | None:intergenic |
| AACACCGATACACTTGATGA+AGG | 0.512373 | 5.1:-68301366 | None:intergenic |
| TGCCGCTGAAGCTCAACTTA+AGG | 0.514396 | 5.1:+68299844 | MS.gene81572:CDS |
| TCCATTGCAGAGCTTCCAGC+TGG | 0.515210 | 5.1:-68304290 | None:intergenic |
| GCTATGTTTGGCTTCCAAAA+GGG | 0.517465 | 5.1:+68301178 | MS.gene81572:CDS |
| TTATCTCCACTACCTTGATA+AGG | 0.519679 | 5.1:-68300895 | None:intergenic |
| TCCACAACCTTCATGCTGAC+AGG | 0.519691 | 5.1:-68301955 | None:intergenic |
| TTTCAATTGACAATGGCACC+TGG | 0.520800 | 5.1:+68301526 | MS.gene81572:CDS |
| CAGATTGCTGTTCATCAGAA+AGG | 0.521420 | 5.1:+68304425 | MS.gene81572:CDS |
| TACATGAAGCTTACTGTAGC+AGG | 0.521859 | 5.1:+68301922 | MS.gene81572:CDS |
| ACAATCCTCTTAACCTGTCA+CGG | 0.525336 | 5.1:-68304316 | None:intergenic |
| TTCCGTGTCATCAATGGGGT+TGG | 0.525545 | 5.1:+68301845 | MS.gene81572:CDS |
| CACATTCACTGTGGCAGGTG+TGG | 0.527747 | 5.1:+68302008 | MS.gene81572:CDS |
| CGGCACGAAATTAGCCGCAA+GGG | 0.530156 | 5.1:-68304248 | None:intergenic |
| GCTGTACCTTATCAAGGTAG+TGG | 0.534703 | 5.1:+68300889 | MS.gene81572:CDS |
| ACGAGAGTGTTTGTGGGTCA+AGG | 0.535726 | 5.1:+68304345 | MS.gene81572:CDS |
| GACAATTCTGTAAAACAAGA+AGG | 0.537415 | 5.1:-68300931 | None:intergenic |
| GCGGCACGAAATTAGCCGCA+AGG | 0.538583 | 5.1:-68304249 | None:intergenic |
| TCCAGCTGGAAGCTCTGCAA+TGG | 0.540046 | 5.1:+68304289 | MS.gene81572:CDS |
| TCATCTACTGTACCGGTCTG+TGG | 0.543797 | 5.1:-68301480 | None:intergenic |
| TGAACGTCCACAAGAATCAC+AGG | 0.548576 | 5.1:-68304375 | None:intergenic |
| AGCAAGATTGAAACTCCAAA+AGG | 0.548705 | 5.1:+68299748 | MS.gene81572:CDS |
| GAAAACCTAATTGTTGGGAG+GGG | 0.550580 | 5.1:+68300841 | MS.gene81572:CDS |
| AGAAAACCTAATTGTTGGGA+GGG | 0.551698 | 5.1:+68300840 | MS.gene81572:CDS |
| GCAAAACTTCAACCTGAAAG+AGG | 0.552930 | 5.1:+68301207 | MS.gene81572:CDS |
| TACCTTAAGTTGAGCTTCAG+CGG | 0.556136 | 5.1:-68299846 | None:intergenic |
| TGTGGTGATATGGTTCCAGC+TGG | 0.557576 | 5.1:+68304275 | MS.gene81572:CDS |
| CATGAGAAGACCACTCATGC+TGG | 0.557723 | 5.1:-68301662 | None:intergenic |
| CCCACTAGAAATTCTCTCCC+AGG | 0.558842 | 5.1:-68301544 | None:intergenic |
| CAGAGCACGAGAGTGTTTGT+GGG | 0.559598 | 5.1:+68304339 | MS.gene81572:CDS |
| GAGACCCACTGAACATTCAT+CGG | 0.560117 | 5.1:-68301088 | None:intergenic |
| ACATAGCGGACTTCAATCAA+TGG | 0.560186 | 5.1:-68301162 | None:intergenic |
| TTAGAATCAGAGACAAATGA+AGG | 0.564173 | 5.1:+68301588 | MS.gene81572:CDS |
| GAGCCACTTCAGTGCCCTTG+TGG | 0.570123 | 5.1:+68302080 | MS.gene81572:CDS |
| TGGACGTTCAGTGATGTTGA+AGG | 0.573883 | 5.1:+68304388 | MS.gene81572:CDS |
| TTCAATTGACAATGGCACCT+GGG | 0.580166 | 5.1:+68301527 | MS.gene81572:CDS |
| AAAACCTTCATCAAGTGTAT+CGG | 0.584178 | 5.1:+68301362 | MS.gene81572:CDS |
| GTGTGGTCAAGCTTTCCAGC+AGG | 0.584674 | 5.1:+68302025 | MS.gene81572:CDS |
| CACTCATGCTGGTGTCGTGT+AGG | 0.585828 | 5.1:-68301651 | None:intergenic |
| AAGCATCAGTTTGCCCCTTG+CGG | 0.586614 | 5.1:+68304234 | MS.gene81572:CDS |
| GGTTGGATACTGAACAATGT+AGG | 0.587698 | 5.1:+68301862 | MS.gene81572:CDS |
| CTACACGACACCAGCATGAG+TGG | 0.590981 | 5.1:+68301652 | MS.gene81572:CDS |
| AAATTATTCCATACATGAGG+AGG | 0.594349 | 5.1:-68301111 | None:intergenic |
| CAATCCTCTTAACCTGTCAC+GGG | 0.595642 | 5.1:-68304315 | None:intergenic |
| ATTCCACAAGGGCACTGAAG+TGG | 0.598606 | 5.1:-68302083 | None:intergenic |
| CACTGCCGATGAATGTTCAG+TGG | 0.601679 | 5.1:+68301083 | MS.gene81572:CDS |
| CAGACCGGTACAGTAGATGA+AGG | 0.602462 | 5.1:+68301483 | MS.gene81572:CDS |
| TCAGTTATCGTTGACTCACA+AGG | 0.603524 | 5.1:+68300990 | MS.gene81572:CDS |
| GGCACGAAATTAGCCGCAAG+GGG | 0.604282 | 5.1:-68304247 | None:intergenic |
| AACGTTACCTGTCAGCATGA+AGG | 0.604821 | 5.1:+68301948 | MS.gene81572:CDS |
| GGTGCGGGGACTTACAGCAT+TGG | 0.604908 | 5.1:+68301732 | MS.gene81572:CDS |
| AACAAATTATTCCATACATG+AGG | 0.610239 | 5.1:-68301114 | None:intergenic |
| ACTGCACCCTGTGATTCTTG+TGG | 0.615018 | 5.1:+68304368 | MS.gene81572:CDS |
| CAGCATGCTACACTTTCTCA+AGG | 0.618267 | 5.1:+68301282 | MS.gene81572:CDS |
| GAACCATATCACCACAAAAG+CGG | 0.619475 | 5.1:-68304268 | None:intergenic |
| TTCTCAAGTACTATTCCACA+AGG | 0.627240 | 5.1:-68302095 | None:intergenic |
| ACTGCCGATGAATGTTCAGT+GGG | 0.630768 | 5.1:+68301084 | MS.gene81572:CDS |
| ATCCAACCCCATTGATGACA+CGG | 0.632329 | 5.1:-68301847 | None:intergenic |
| GTATTTGGAACTCCACAGAC+CGG | 0.637611 | 5.1:+68301468 | MS.gene81572:CDS |
| TTATCGTTGACTCACAAGGA+GGG | 0.640289 | 5.1:+68300994 | MS.gene81572:CDS |
| AAGAAAACCTAATTGTTGGG+AGG | 0.645360 | 5.1:+68300839 | MS.gene81572:CDS |
| AATTATTCCATACATGAGGA+GGG | 0.646236 | 5.1:-68301110 | None:intergenic |
| CCTGGGAGAGAATTTCTAGT+GGG | 0.655597 | 5.1:+68301544 | MS.gene81572:CDS |
| AAACTTCAACCTGAAAGAGG+AGG | 0.655997 | 5.1:+68301210 | MS.gene81572:CDS |
| ACCTGGGAGAGAATTTCTAG+TGG | 0.660457 | 5.1:+68301543 | MS.gene81572:CDS |
| GTTATCGTTGACTCACAAGG+AGG | 0.666496 | 5.1:+68300993 | MS.gene81572:CDS |
| AATTCTGTAAAACAAGAAGG+AGG | 0.679062 | 5.1:-68300928 | None:intergenic |
| AACGATAACTGAAAGTACAT+CGG | 0.687946 | 5.1:-68300979 | None:intergenic |
| TGTCGTGTAGGAAATATGAG+AGG | 0.709082 | 5.1:-68301639 | None:intergenic |
| CATCTTCCGTGTCATCAATG+GGG | 0.720890 | 5.1:+68301841 | MS.gene81572:CDS |
| GTCGTGTAGGAAATATGAGA+GGG | 0.721636 | 5.1:-68301638 | None:intergenic |
| TCTCAAGTACTATTCCACAA+GGG | 0.727795 | 5.1:-68302094 | None:intergenic |
| GAACGTCCACAAGAATCACA+GGG | 0.732152 | 5.1:-68304374 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAATATTGTATTTGTAT+TGG | + | chr5.1:68304048-68304067 | MS.gene81572:intron | 10.0% |
| !!! | CTTTTTATTTTAATTTTGTT+AGG | + | chr5.1:68304202-68304221 | MS.gene81572:intron | 10.0% |
| !! | TAGTAAATATATAATGAATC+AGG | - | chr5.1:68303841-68303860 | None:intergenic | 15.0% |
| !! | TCAAATTTCAATATCATTAA+AGG | - | chr5.1:68300616-68300635 | None:intergenic | 15.0% |
| !!! | ATCAAAAAGGTTTTAAATAT+AGG | - | chr5.1:68303180-68303199 | None:intergenic | 15.0% |
| !!! | TATATTTAAAACCTTTTTGA+TGG | + | chr5.1:68303179-68303198 | MS.gene81572:intron | 15.0% |
| !!! | TATTTTTATTTTCTAACCTA+AGG | + | chr5.1:68302968-68302987 | MS.gene81572:intron | 15.0% |
| !!! | TATTTTTGATATTGTTCTTT+TGG | + | chr5.1:68302208-68302227 | MS.gene81572:intron | 15.0% |
| !!! | TGTAATTTTATTGGAATATA+GGG | + | chr5.1:68300439-68300458 | MS.gene81572:intron | 15.0% |
| !!! | TTGTAATTTTATTGGAATAT+AGG | + | chr5.1:68300438-68300457 | MS.gene81572:intron | 15.0% |
| !!! | TTTATTTTAATTTTGTTAGG+TGG | + | chr5.1:68304205-68304224 | MS.gene81572:intron | 15.0% |
| !!! | TTTTAAATATAGGATCAATT+TGG | - | chr5.1:68303170-68303189 | None:intergenic | 15.0% |
| !! | AAAACTTGAACACAAATTAA+GGG | + | chr5.1:68301329-68301348 | MS.gene81572:CDS | 20.0% |
| !! | AAAATTCTTCTCTTATGTTT+AGG | - | chr5.1:68300109-68300128 | None:intergenic | 20.0% |
| !! | AACAACAACTATATTTCTTT+AGG | - | chr5.1:68303005-68303024 | None:intergenic | 20.0% |
| !! | ACAAATATGACAAAAAAAAG+TGG | - | chr5.1:68303917-68303936 | None:intergenic | 20.0% |
| !! | ATTATCAAACAATATTGAAC+AGG | + | chr5.1:68302320-68302339 | MS.gene81572:intron | 20.0% |
| !! | ATTCCAATAAAATTACAACT+AGG | - | chr5.1:68300436-68300455 | None:intergenic | 20.0% |
| !! | TCATATTTGTATTTGTAGAT+TGG | - | chr5.1:68300693-68300712 | None:intergenic | 20.0% |
| !! | TCCAAAAAATAATCATATAG+CGG | + | chr5.1:68303517-68303536 | MS.gene81572:intron | 20.0% |
| !! | TTGATTTACATAAATCTTAG+CGG | + | chr5.1:68303030-68303049 | MS.gene81572:intron | 20.0% |
| !!! | AAATTCCTTTTTCTTATAGA+CGG | - | chr5.1:68304179-68304198 | None:intergenic | 20.0% |
| !!! | AAGATACCATTTTATTAGAA+AGG | + | chr5.1:68300295-68300314 | MS.gene81572:intron | 20.0% |
| !!! | AATTGTTTTTTATCGTTTAC+TGG | + | chr5.1:68300864-68300883 | MS.gene81572:CDS | 20.0% |
| !!! | TAATTACTTTTAGGATGAAA+CGG | + | chr5.1:68300026-68300045 | MS.gene81572:intron | 20.0% |
| !!! | TACAAATTTTCAATTGACAA+TGG | + | chr5.1:68301519-68301538 | MS.gene81572:CDS | 20.0% |
| ! | AAAACAAATGTCGAAAGTTT+AGG | + | chr5.1:68302795-68302814 | MS.gene81572:intron | 25.0% |
| ! | AAATGTGGTATAGCTATTAT+TGG | + | chr5.1:68303616-68303635 | MS.gene81572:intron | 25.0% |
| ! | AACAAATGTTCGTAATTAGT+TGG | + | chr5.1:68299963-68299982 | MS.gene81572:intron | 25.0% |
| ! | AACAAATTATTCCATACATG+AGG | - | chr5.1:68301117-68301136 | None:intergenic | 25.0% |
| ! | ACCATAAAACAAAAGAAAAC+AGG | - | chr5.1:68303347-68303366 | None:intergenic | 25.0% |
| ! | ACTCAAGTCTCTAATTAAAT+AGG | - | chr5.1:68302862-68302881 | None:intergenic | 25.0% |
| ! | AGAAAGAGTTGAAAAATGTT+GGG | - | chr5.1:68303226-68303245 | None:intergenic | 25.0% |
| ! | AGATAATTTCAACCAAAAAC+TGG | + | chr5.1:68301806-68301825 | MS.gene81572:CDS | 25.0% |
| ! | ATAAATTAGGACAGACATAA+CGG | - | chr5.1:68302235-68302254 | None:intergenic | 25.0% |
| ! | ATCAAATGACAAGAGAAAAT+TGG | - | chr5.1:68303948-68303967 | None:intergenic | 25.0% |
| ! | CAAACACCTTTCTAATAAAA+TGG | - | chr5.1:68300304-68300323 | None:intergenic | 25.0% |
| ! | CATAAAACAAAAGAAAACAG+GGG | - | chr5.1:68303345-68303364 | None:intergenic | 25.0% |
| ! | CATTGAATAATTGATGTATC+TGG | - | chr5.1:68300179-68300198 | None:intergenic | 25.0% |
| ! | CCATAAAACAAAAGAAAACA+GGG | - | chr5.1:68303346-68303365 | None:intergenic | 25.0% |
| ! | GAAAACTTGAACACAAATTA+AGG | + | chr5.1:68301328-68301347 | MS.gene81572:CDS | 25.0% |
| ! | GAATTGAACATAGTAAACAA+AGG | - | chr5.1:68300801-68300820 | None:intergenic | 25.0% |
| ! | GATAATTTCAACCAAAAACT+GGG | + | chr5.1:68301807-68301826 | MS.gene81572:CDS | 25.0% |
| ! | TAGAGAAAAGAATTCACAAA+AGG | - | chr5.1:68302417-68302436 | None:intergenic | 25.0% |
| ! | TATGTCTGTCCTAATTTATT+TGG | + | chr5.1:68302236-68302255 | MS.gene81572:intron | 25.0% |
| ! | TATTGTCATGTTAAAAACCT+AGG | - | chr5.1:68300764-68300783 | None:intergenic | 25.0% |
| ! | TCATACGATAATGAAAACAA+TGG | - | chr5.1:68303719-68303738 | None:intergenic | 25.0% |
| ! | TGTATATAAGAAACCATTCA+AGG | - | chr5.1:68300563-68300582 | None:intergenic | 25.0% |
| ! | TTCCTACTAAAATCAAATAG+CGG | - | chr5.1:68303143-68303162 | None:intergenic | 25.0% |
| ! | TTGTTTACTATGTTCAATTC+AGG | + | chr5.1:68300801-68300820 | MS.gene81572:intron | 25.0% |
| !! | GAATTTTTGTTCATGTTCAT+TGG | + | chr5.1:68300122-68300141 | MS.gene81572:intron | 25.0% |
| !!! | AATTACTTTTAGGATGAAAC+GGG | + | chr5.1:68300027-68300046 | MS.gene81572:intron | 25.0% |
| !!! | ACCGCTATATGATTATTTTT+TGG | - | chr5.1:68303521-68303540 | None:intergenic | 25.0% |
| !!! | ATTAGCTTTTAATTCTGCAA+CGG | + | chr5.1:68304012-68304031 | MS.gene81572:intron | 25.0% |
| !!! | GAGTTAATTTGTTTTCTTCA+AGG | + | chr5.1:68302460-68302479 | MS.gene81572:intron | 25.0% |
| !!! | GTTTTTGGTTGAAATTATCT+TGG | - | chr5.1:68301806-68301825 | None:intergenic | 25.0% |
| !!! | TGGAATAATTTGTTTTCTGA+AGG | + | chr5.1:68301123-68301142 | MS.gene81572:CDS | 25.0% |
| !!! | TTTATTAGAAAGGTGTTTGT+AGG | + | chr5.1:68300305-68300324 | MS.gene81572:intron | 25.0% |
| !!! | TTTGGTGTTTTGATTTATGA+AGG | + | chr5.1:68303412-68303431 | MS.gene81572:intron | 25.0% |
| AAAACCATACTAGACAAGAA+TGG | - | chr5.1:68302150-68302169 | None:intergenic | 30.0% | |
| AAAACCTTCATCAAGTGTAT+CGG | + | chr5.1:68301362-68301381 | MS.gene81572:CDS | 30.0% | |
| AAACTCTTCTATCTTCCAAT+TGG | + | chr5.1:68303270-68303289 | MS.gene81572:intron | 30.0% | |
| AAATGTTCGTAATTAGTTGG+TGG | + | chr5.1:68299966-68299985 | MS.gene81572:intron | 30.0% | |
| AAATTATTCCATACATGAGG+AGG | - | chr5.1:68301114-68301133 | None:intergenic | 30.0% | |
| AACACCAAAAAACAAAACAG+AGG | - | chr5.1:68303401-68303420 | None:intergenic | 30.0% | |
| AACTATGATGACTGTTTATC+AGG | - | chr5.1:68302498-68302517 | None:intergenic | 30.0% | |
| AACTGCATGTTTAAGAATAG+TGG | - | chr5.1:68302568-68302587 | None:intergenic | 30.0% | |
| AAGTTTATCTTAATCAGCAG+TGG | - | chr5.1:68300669-68300688 | None:intergenic | 30.0% | |
| AATTATTCCATACATGAGGA+GGG | - | chr5.1:68301113-68301132 | None:intergenic | 30.0% | |
| AATTCTGTAAAACAAGAAGG+AGG | - | chr5.1:68300931-68300950 | None:intergenic | 30.0% | |
| ACTGGGATATGTTAGAATTT+GGG | + | chr5.1:68302261-68302280 | MS.gene81572:intron | 30.0% | |
| AGATACTGACAAAGAGAAAA+CGG | + | chr5.1:68301032-68301051 | MS.gene81572:CDS | 30.0% | |
| AGTACTTGAGAAAGAGAAAA+TGG | + | chr5.1:68302106-68302125 | MS.gene81572:CDS | 30.0% | |
| AGTCAGTATAGTTATTGATG+AGG | + | chr5.1:68303648-68303667 | MS.gene81572:intron | 30.0% | |
| AGTTTATCTTAATCAGCAGT+GGG | - | chr5.1:68300668-68300687 | None:intergenic | 30.0% | |
| ATACAAATGCATAGTCTGTT+AGG | + | chr5.1:68300345-68300364 | MS.gene81572:intron | 30.0% | |
| ATGCAAGAAAACCTAATTGT+TGG | + | chr5.1:68300835-68300854 | MS.gene81572:CDS | 30.0% | |
| CAAAATTGAACCCAATTGAT+AGG | + | chr5.1:68303770-68303789 | MS.gene81572:intron | 30.0% | |
| CTCTATGTAAGCAATCTTAA+TGG | + | chr5.1:68302432-68302451 | MS.gene81572:intron | 30.0% | |
| GAAAGAACAAAAAGAACGAA+AGG | + | chr5.1:68299721-68299740 | MS.gene81572:CDS | 30.0% | |
| GAAAGAGTTGAAAAATGTTG+GGG | - | chr5.1:68303225-68303244 | None:intergenic | 30.0% | |
| GAAATCCGTCTATAAGAAAA+AGG | + | chr5.1:68304171-68304190 | MS.gene81572:intron | 30.0% | |
| GACAATTCTGTAAAACAAGA+AGG | - | chr5.1:68300934-68300953 | None:intergenic | 30.0% | |
| GAGAAAGAGTTGAAAAATGT+TGG | - | chr5.1:68303227-68303246 | None:intergenic | 30.0% | |
| GTCCAAAATAGATATACACT+GGG | - | chr5.1:68303800-68303819 | None:intergenic | 30.0% | |
| TAAGGATAAAAACTTAGGTG+CGG | + | chr5.1:68301716-68301735 | MS.gene81572:CDS | 30.0% | |
| TACTGGGATATGTTAGAATT+TGG | + | chr5.1:68302260-68302279 | MS.gene81572:intron | 30.0% | |
| TATAAGAAACCATTCAAGGA+TGG | - | chr5.1:68300559-68300578 | None:intergenic | 30.0% | |
| TCCTAATTTATTTGGCTACT+GGG | + | chr5.1:68302244-68302263 | MS.gene81572:intron | 30.0% | |
| TCTGAAAAAATGAGTCTTCT+CGG | + | chr5.1:68300201-68300220 | MS.gene81572:intron | 30.0% | |
| TGATAAACAGTCATCATAGT+TGG | + | chr5.1:68302497-68302516 | MS.gene81572:intron | 30.0% | |
| TGCAAGAAAACCTAATTGTT+GGG | + | chr5.1:68300836-68300855 | MS.gene81572:CDS | 30.0% | |
| TGCTTATCAAATTGAGATTC+AGG | - | chr5.1:68304136-68304155 | None:intergenic | 30.0% | |
| TTAGAATCAGAGACAAATGA+AGG | + | chr5.1:68301588-68301607 | MS.gene81572:CDS | 30.0% | |
| TTCTGATTTACCAAACCATA+AGG | + | chr5.1:68301236-68301255 | MS.gene81572:CDS | 30.0% | |
| TTTACAGAATTGTCTGATCA+TGG | + | chr5.1:68300940-68300959 | MS.gene81572:CDS | 30.0% | |
| ! | AACGATAACTGAAAGTACAT+CGG | - | chr5.1:68300982-68301001 | None:intergenic | 30.0% |
| ! | ATTGGTGTAAACGGATTTAA+AGG | + | chr5.1:68301750-68301769 | MS.gene81572:CDS | 30.0% |
| ! | GACATTTTCACTGTAAACTA+TGG | + | chr5.1:68301306-68301325 | MS.gene81572:CDS | 30.0% |
| ! | GTGCCTAGTTGTAATTTTAT+TGG | + | chr5.1:68300430-68300449 | MS.gene81572:intron | 30.0% |
| ! | TCAATTTTCTCTCCAAATCA+CGG | + | chr5.1:68302740-68302759 | MS.gene81572:intron | 30.0% |
| ! | TTTAAGAATAGTGGAAGACT+TGG | - | chr5.1:68302559-68302578 | None:intergenic | 30.0% |
| !! | AAACCTTTTTGATGGCATTT+TGG | + | chr5.1:68303187-68303206 | MS.gene81572:intron | 30.0% |
| !! | AACCTTTTTGATGGCATTTT+GGG | + | chr5.1:68303188-68303207 | MS.gene81572:intron | 30.0% |
| !! | AGCTCTAAGGATAAAAACTT+AGG | + | chr5.1:68301711-68301730 | MS.gene81572:CDS | 30.0% |
| !! | GAATTCTAAAACTCCTGAAT+GGG | - | chr5.1:68301064-68301083 | None:intergenic | 30.0% |
| !! | GTTTTCTGAAGGTTGTATTA+TGG | + | chr5.1:68301134-68301153 | MS.gene81572:CDS | 30.0% |
| !! | TAAGACTGTTAGTTTGTACT+TGG | - | chr5.1:68301781-68301800 | None:intergenic | 30.0% |
| !! | TGAATTCTAAAACTCCTGAA+TGG | - | chr5.1:68301065-68301084 | None:intergenic | 30.0% |
| !!! | CCCTGTTTTCTTTTGTTTTA+TGG | + | chr5.1:68303343-68303362 | MS.gene81572:intron | 30.0% |
| !!! | GTTTTAATTCCAGCAGTATT+TGG | + | chr5.1:68301453-68301472 | MS.gene81572:CDS | 30.0% |
| !!! | TGTTCCTCTGTTTTGTTTTT+TGG | + | chr5.1:68303394-68303413 | MS.gene81572:intron | 30.0% |
| AAAAGCGAAAGAGTGAAAAG+AGG | - | chr5.1:68299885-68299904 | None:intergenic | 35.0% | |
| AAAGCGAAAGAGTGAAAAGA+GGG | - | chr5.1:68299884-68299903 | None:intergenic | 35.0% | |
| AAGAAAACCTAATTGTTGGG+AGG | + | chr5.1:68300839-68300858 | MS.gene81572:CDS | 35.0% | |
| AAGGATAAAAACTTAGGTGC+GGG | + | chr5.1:68301717-68301736 | MS.gene81572:CDS | 35.0% | |
| ACAGGGGAAGAAAAAAACAA+TGG | - | chr5.1:68303329-68303348 | None:intergenic | 35.0% | |
| AGAAAACCTAATTGTTGGGA+GGG | + | chr5.1:68300840-68300859 | MS.gene81572:CDS | 35.0% | |
| AGCAAGATTGAAACTCCAAA+AGG | + | chr5.1:68299748-68299767 | MS.gene81572:CDS | 35.0% | |
| AGTATAGATCCATCCTTGAA+TGG | + | chr5.1:68300547-68300566 | MS.gene81572:intron | 35.0% | |
| CGTCCAAAATAGATATACAC+TGG | - | chr5.1:68303801-68303820 | None:intergenic | 35.0% | |
| CTGGGATATGTTAGAATTTG+GGG | + | chr5.1:68302262-68302281 | MS.gene81572:intron | 35.0% | |
| GATACTGACAAAGAGAAAAC+GGG | + | chr5.1:68301033-68301052 | MS.gene81572:CDS | 35.0% | |
| GTAAGCATTACATACCTTCT+AGG | + | chr5.1:68301889-68301908 | MS.gene81572:CDS | 35.0% | |
| GTCAGCATAGTAGTCAATAA+CGG | - | chr5.1:68303596-68303615 | None:intergenic | 35.0% | |
| GTCCTAATTTATTTGGCTAC+TGG | + | chr5.1:68302243-68302262 | MS.gene81572:intron | 35.0% | |
| GTTAAAAACCTAGGCATGAA+AGG | - | chr5.1:68300755-68300774 | None:intergenic | 35.0% | |
| GTTTAGGTATCTGAACCTTA+TGG | + | chr5.1:68302811-68302830 | MS.gene81572:intron | 35.0% | |
| TAGTGGGAGTTCTATTATTG+AGG | + | chr5.1:68301560-68301579 | MS.gene81572:CDS | 35.0% | |
| TCACTACCTAAACTAAGTGT+TGG | + | chr5.1:68303888-68303907 | MS.gene81572:intron | 35.0% | |
| TCCAAAAATCACATTCACTG+TGG | + | chr5.1:68301999-68302018 | MS.gene81572:CDS | 35.0% | |
| TCCCAGTAGCCAAATAAATT+AGG | - | chr5.1:68302248-68302267 | None:intergenic | 35.0% | |
| TCTCAAGTACTATTCCACAA+GGG | - | chr5.1:68302097-68302116 | None:intergenic | 35.0% | |
| TGGAGTTGTTCTTAGAATTG+AGG | + | chr5.1:68301974-68301993 | MS.gene81572:CDS | 35.0% | |
| TTATCTCCACTACCTTGATA+AGG | - | chr5.1:68300898-68300917 | None:intergenic | 35.0% | |
| TTCTCAAGTACTATTCCACA+AGG | - | chr5.1:68302098-68302117 | None:intergenic | 35.0% | |
| TTGACAATCATGCCAAGTAT+GGG | - | chr5.1:68300270-68300289 | None:intergenic | 35.0% | |
| TTTGACAATCATGCCAAGTA+TGG | - | chr5.1:68300271-68300290 | None:intergenic | 35.0% | |
| ! | AATTTTCTCTCCAAATCACG+GGG | + | chr5.1:68302742-68302761 | MS.gene81572:intron | 35.0% |
| ! | ACTTGTCAGCTTAGTCATTT+TGG | - | chr5.1:68300530-68300549 | None:intergenic | 35.0% |
| ! | AGATAGAAGAGTTTGTTTCG+CGG | - | chr5.1:68303264-68303283 | None:intergenic | 35.0% |
| ! | AGTTTTGCATAAGTCCCTTT+TGG | - | chr5.1:68301195-68301214 | None:intergenic | 35.0% |
| ! | CAATTTTCTCTCCAAATCAC+GGG | + | chr5.1:68302741-68302760 | MS.gene81572:intron | 35.0% |
| ! | CACCCAGTGTATATCTATTT+TGG | + | chr5.1:68303795-68303814 | MS.gene81572:intron | 35.0% |
| ! | CTTCTCTTATGTTTAGGACA+TGG | - | chr5.1:68300103-68300122 | None:intergenic | 35.0% |
| ! | CTTTCGCTTTCTTTTCCTTT+TGG | - | chr5.1:68299766-68299785 | None:intergenic | 35.0% |
| ! | TTAGGTTTTCTTGCATCTGT+TGG | - | chr5.1:68300831-68300850 | None:intergenic | 35.0% |
| ! | TTTCTTCAAGGTTAGCTAAG+AGG | + | chr5.1:68302472-68302491 | MS.gene81572:intron | 35.0% |
| !! | ACCTTTTTGATGGCATTTTG+GGG | + | chr5.1:68303189-68303208 | MS.gene81572:intron | 35.0% |
| !! | ACTTACAGCATTGGTGTAAA+CGG | + | chr5.1:68301741-68301760 | MS.gene81572:CDS | 35.0% |
| !! | AGCCGCTATTTGATTTTAGT+AGG | + | chr5.1:68303138-68303157 | MS.gene81572:intron | 35.0% |
| !! | ATAGTTGGTAGTCTACTGAT+GGG | + | chr5.1:68302512-68302531 | MS.gene81572:intron | 35.0% |
| !! | GAACGGACAATTCTGAAATT+AGG | + | chr5.1:68300229-68300248 | MS.gene81572:intron | 35.0% |
| !! | GTCTGTTCTGAGAAATCAAT+AGG | - | chr5.1:68301423-68301442 | None:intergenic | 35.0% |
| !! | TAGTAGTCAATAACGGATAG+CGG | - | chr5.1:68303589-68303608 | None:intergenic | 35.0% |
| !! | TTAAATAGGTTTTGACCAGC+AGG | - | chr5.1:68302848-68302867 | None:intergenic | 35.0% |
| !!! | GTGAAAAGAGGGTTTTGATT+AGG | - | chr5.1:68299873-68299892 | None:intergenic | 35.0% |
| AAAAGTGGGATAGCGTATAG+CGG | - | chr5.1:68303548-68303567 | None:intergenic | 40.0% | |
| AAAATCACATTCACTGTGGC+AGG | + | chr5.1:68302003-68302022 | MS.gene81572:CDS | 40.0% | |
| AAACTTCAACCTGAAAGAGG+AGG | + | chr5.1:68301210-68301229 | MS.gene81572:CDS | 40.0% | |
| AAATCAAATAGCGGCTGAAG+CGG | - | chr5.1:68303134-68303153 | None:intergenic | 40.0% | |
| AACACCGATACACTTGATGA+AGG | - | chr5.1:68301369-68301388 | None:intergenic | 40.0% | |
| AATCACTTCCTTTCATGCCT+AGG | + | chr5.1:68300744-68300763 | MS.gene81572:intron | 40.0% | |
| AATGTTGTGTTCAGCCACAA+AGG | - | chr5.1:68300406-68300425 | None:intergenic | 40.0% | |
| ACAATCCTCTTAACCTGTCA+CGG | - | chr5.1:68304319-68304338 | None:intergenic | 40.0% | |
| ACTGGGTGTTCCTATCAATT+GGG | - | chr5.1:68303783-68303802 | None:intergenic | 40.0% | |
| ACTTGTCTATTCCCCATACT+TGG | + | chr5.1:68300255-68300274 | MS.gene81572:intron | 40.0% | |
| AGATCTTTGAGCAGCTTCAA+TGG | - | chr5.1:68299813-68299832 | None:intergenic | 40.0% | |
| AGCGATGTGGAATCAAATAG+TGG | + | chr5.1:68303108-68303127 | MS.gene81572:intron | 40.0% | |
| AGGATAAAAACTTAGGTGCG+GGG | + | chr5.1:68301718-68301737 | MS.gene81572:CDS | 40.0% | |
| ATATCTGTGTGTGTGAATGC+AGG | - | chr5.1:68302711-68302730 | None:intergenic | 40.0% | |
| ATCATCTTCCGTGTCATCAA+TGG | + | chr5.1:68301839-68301858 | MS.gene81572:CDS | 40.0% | |
| ATGTTGTGTTCAGCCACAAA+GGG | - | chr5.1:68300405-68300424 | None:intergenic | 40.0% | |
| CAATCCTCGAAACAAGTCTT+CGG | + | chr5.1:68301259-68301278 | MS.gene81572:CDS | 40.0% | |
| CACACCATTCTTGTCTAGTA+TGG | + | chr5.1:68302143-68302162 | MS.gene81572:intron | 40.0% | |
| CCAACTCATACCAACTATGA+CGG | + | chr5.1:68302629-68302648 | MS.gene81572:intron | 40.0% | |
| CTGTTCATCAGAAAGGCTAA+TGG | + | chr5.1:68304432-68304451 | MS.gene81572:CDS | 40.0% | |
| CTTACGCGAATCATCATCAT+TGG | + | chr5.1:68299908-68299927 | MS.gene81572:intron | 40.0% | |
| CTTTCCTTCATCTACTGTAC+CGG | - | chr5.1:68301490-68301509 | None:intergenic | 40.0% | |
| GAAAAAATGAGTCTTCTCGG+TGG | + | chr5.1:68300204-68300223 | MS.gene81572:intron | 40.0% | |
| GAAAACCTAATTGTTGGGAG+GGG | + | chr5.1:68300841-68300860 | MS.gene81572:CDS | 40.0% | |
| GAAAGAGAGAAAAGATCTCC+AGG | - | chr5.1:68303305-68303324 | None:intergenic | 40.0% | |
| GAACCATATCACCACAAAAG+CGG | - | chr5.1:68304271-68304290 | None:intergenic | 40.0% | |
| GACTACTATGCTGACAAATG+TGG | + | chr5.1:68303601-68303620 | MS.gene81572:intron | 40.0% | |
| GACTTTGATTCTCAGCTCTA+AGG | + | chr5.1:68301698-68301717 | MS.gene81572:CDS | 40.0% | |
| GAGTGGTCTTCTCATGATAT+TGG | + | chr5.1:68301669-68301688 | MS.gene81572:CDS | 40.0% | |
| GATTGCATTCATAGACTGAG+AGG | - | chr5.1:68300728-68300747 | None:intergenic | 40.0% | |
| GCAAAACTTCAACCTGAAAG+AGG | + | chr5.1:68301207-68301226 | MS.gene81572:CDS | 40.0% | |
| GGTTGGATACTGAACAATGT+AGG | + | chr5.1:68301862-68301881 | MS.gene81572:CDS | 40.0% | |
| GTAAGCAATCTTAATGGTGC+TGG | + | chr5.1:68302438-68302457 | MS.gene81572:intron | 40.0% | |
| GTCGTGTAGGAAATATGAGA+GGG | - | chr5.1:68301641-68301660 | None:intergenic | 40.0% | |
| TACATGAAGCTTACTGTAGC+AGG | + | chr5.1:68301922-68301941 | MS.gene81572:CDS | 40.0% | |
| TCAGAAAATCCTCCTCTTTC+AGG | - | chr5.1:68301222-68301241 | None:intergenic | 40.0% | |
| TCATCTTCCGTGTCATCAAT+GGG | + | chr5.1:68301840-68301859 | MS.gene81572:CDS | 40.0% | |
| TGACAATCATGCCAAGTATG+GGG | - | chr5.1:68300269-68300288 | None:intergenic | 40.0% | |
| TGATTGAAGTCCGCTATGTT+TGG | + | chr5.1:68301166-68301185 | MS.gene81572:CDS | 40.0% | |
| TGTAGTGCAATAGTCCTAGA+AGG | - | chr5.1:68301906-68301925 | None:intergenic | 40.0% | |
| TGTCGTGTAGGAAATATGAG+AGG | - | chr5.1:68301642-68301661 | None:intergenic | 40.0% | |
| TTCAATTGACAATGGCACCT+GGG | + | chr5.1:68301527-68301546 | MS.gene81572:CDS | 40.0% | |
| TTCAGTGATGTTGAAGGAGA+TGG | + | chr5.1:68304394-68304413 | MS.gene81572:CDS | 40.0% | |
| TTGTGAGCTGAACTGACATT+TGG | + | chr5.1:68302672-68302691 | MS.gene81572:intron | 40.0% | |
| TTGTTTCGAGGATTGCCTTA+TGG | - | chr5.1:68301254-68301273 | None:intergenic | 40.0% | |
| TTTCAATTGACAATGGCACC+TGG | + | chr5.1:68301526-68301545 | MS.gene81572:CDS | 40.0% | |
| ! | CAGATTGCTGTTCATCAGAA+AGG | + | chr5.1:68304425-68304444 | MS.gene81572:CDS | 40.0% |
| ! | GCCACAGTGAATGTGATTTT+TGG | - | chr5.1:68302003-68302022 | None:intergenic | 40.0% |
| ! | GCTATGTTTGGCTTCCAAAA+GGG | + | chr5.1:68301178-68301197 | MS.gene81572:CDS | 40.0% |
| ! | GTTTAAGATGCCGTCATAGT+TGG | - | chr5.1:68302642-68302661 | None:intergenic | 40.0% |
| ! | TAACTTGTATCCCCGTGATT+TGG | - | chr5.1:68302755-68302774 | None:intergenic | 40.0% |
| ! | TTCATCAAGTGTATCGGTGT+TGG | + | chr5.1:68301368-68301387 | MS.gene81572:CDS | 40.0% |
| !! | ACATAGCGGACTTCAATCAA+TGG | - | chr5.1:68301165-68301184 | None:intergenic | 40.0% |
| !! | CAGCTTAGTCATTTTGGATG+AGG | - | chr5.1:68300524-68300543 | None:intergenic | 40.0% |
| !! | CATAGTTGGTAGTCTACTGA+TGG | + | chr5.1:68302511-68302530 | MS.gene81572:intron | 40.0% |
| !! | CCTTTTTGATGGCATTTTGG+GGG | + | chr5.1:68303190-68303209 | MS.gene81572:intron | 40.0% |
| !! | CTACCTAAACTAAGTGTTGG+TGG | + | chr5.1:68303891-68303910 | MS.gene81572:intron | 40.0% |
| !! | CTATACGCTATCCCACTTTT+GGG | + | chr5.1:68303548-68303567 | MS.gene81572:intron | 40.0% |
| !! | CTTTTGGAAGCCAAACATAG+CGG | - | chr5.1:68301179-68301198 | None:intergenic | 40.0% |
| !! | GCTTTTTCTTGAGCCTTGAA+GGG | - | chr5.1:68300383-68300402 | None:intergenic | 40.0% |
| !! | TACCTTAAGTTGAGCTTCAG+CGG | - | chr5.1:68299849-68299868 | None:intergenic | 40.0% |
| !! | TATACGCTATCCCACTTTTG+GGG | + | chr5.1:68303549-68303568 | MS.gene81572:intron | 40.0% |
| !! | TCAGTTATCGTTGACTCACA+AGG | + | chr5.1:68300990-68301009 | MS.gene81572:CDS | 40.0% |
| !! | TTATCGTTGACTCACAAGGA+GGG | + | chr5.1:68300994-68301013 | MS.gene81572:CDS | 40.0% |
| AAAACGGGAACAACCCATTC+AGG | + | chr5.1:68301048-68301067 | MS.gene81572:CDS | 45.0% | |
| AAATCTTAGCGGCGCTATAG+CGG | + | chr5.1:68303041-68303060 | MS.gene81572:intron | 45.0% | |
| AACGTTACCTGTCAGCATGA+AGG | + | chr5.1:68301948-68301967 | MS.gene81572:CDS | 45.0% | |
| ACTGCCGATGAATGTTCAGT+GGG | + | chr5.1:68301084-68301103 | MS.gene81572:CDS | 45.0% | |
| AGACAAGAATGGTGTGAGAG+AGG | - | chr5.1:68302139-68302158 | None:intergenic | 45.0% | |
| CAATCCTCTTAACCTGTCAC+GGG | - | chr5.1:68304318-68304337 | None:intergenic | 45.0% | |
| CAATTCCCCTCCCAACAATT+AGG | - | chr5.1:68300849-68300868 | None:intergenic | 45.0% | |
| CACTGGGTGTTCCTATCAAT+TGG | - | chr5.1:68303784-68303803 | None:intergenic | 45.0% | |
| CAGCATGCTACACTTTCTCA+AGG | + | chr5.1:68301282-68301301 | MS.gene81572:CDS | 45.0% | |
| CAGGAACTGCAATCTCCATA+AGG | - | chr5.1:68302829-68302848 | None:intergenic | 45.0% | |
| CATCTTCCGTGTCATCAATG+GGG | + | chr5.1:68301841-68301860 | MS.gene81572:CDS | 45.0% | |
| CCCCCAAAATGCCATCAAAA+AGG | - | chr5.1:68303193-68303212 | None:intergenic | 45.0% | |
| CGCTACGATTATTACCGTAG+CGG | - | chr5.1:68303092-68303111 | None:intergenic | 45.0% | |
| CGGTAATAATCGTAGCGATG+TGG | + | chr5.1:68303095-68303114 | MS.gene81572:intron | 45.0% | |
| CTGGAAGCTGTACCTTATCA+AGG | + | chr5.1:68300883-68300902 | MS.gene81572:CDS | 45.0% | |
| GAACGTCCACAAGAATCACA+GGG | - | chr5.1:68304377-68304396 | None:intergenic | 45.0% | |
| GAGACCCACTGAACATTCAT+CGG | - | chr5.1:68301091-68301110 | None:intergenic | 45.0% | |
| GATCATGGTGCGCTTGATAA+GGG | + | chr5.1:68300955-68300974 | MS.gene81572:CDS | 45.0% | |
| GCTCAAGAAAAAGCCCTTTG+TGG | + | chr5.1:68300389-68300408 | MS.gene81572:intron | 45.0% | |
| GCTGTACCTTATCAAGGTAG+TGG | + | chr5.1:68300889-68300908 | MS.gene81572:CDS | 45.0% | |
| GTATATGATGCAGCCCTTCA+AGG | + | chr5.1:68300367-68300386 | MS.gene81572:intron | 45.0% | |
| GTTAGAATTTGGGGATCCAG+CGG | + | chr5.1:68302271-68302290 | MS.gene81572:intron | 45.0% | |
| TCCAATTGGAAAACGCTACC+TGG | + | chr5.1:68303284-68303303 | MS.gene81572:intron | 45.0% | |
| TCGAGGATTGCCTTATGGTT+TGG | - | chr5.1:68301249-68301268 | None:intergenic | 45.0% | |
| TGAACGTCCACAAGAATCAC+AGG | - | chr5.1:68304378-68304397 | None:intergenic | 45.0% | |
| TGATCATGGTGCGCTTGATA+AGG | + | chr5.1:68300954-68300973 | MS.gene81572:CDS | 45.0% | |
| TGGACGTTCAGTGATGTTGA+AGG | + | chr5.1:68304388-68304407 | MS.gene81572:CDS | 45.0% | |
| TGGCCACCAACACTTAGTTT+AGG | - | chr5.1:68303897-68303916 | None:intergenic | 45.0% | |
| TGTGGAGTTCCAAATACTGC+TGG | - | chr5.1:68301465-68301484 | None:intergenic | 45.0% | |
| ! | ACCTGGGAGAGAATTTCTAG+TGG | + | chr5.1:68301543-68301562 | MS.gene81572:CDS | 45.0% |
| ! | ACGATATAAGCTTTTGCCGC+TGG | - | chr5.1:68302290-68302309 | None:intergenic | 45.0% |
| ! | ATCCAACCCCATTGATGACA+CGG | - | chr5.1:68301850-68301869 | None:intergenic | 45.0% |
| ! | CCGTCATAGTTGGTATGAGT+TGG | - | chr5.1:68302632-68302651 | None:intergenic | 45.0% |
| ! | CGCTATGTTTGGCTTCCAAA+AGG | + | chr5.1:68301177-68301196 | MS.gene81572:CDS | 45.0% |
| ! | GCTATACGCTATCCCACTTT+TGG | + | chr5.1:68303547-68303566 | MS.gene81572:intron | 45.0% |
| ! | GTATTTGGAACTCCACAGAC+CGG | + | chr5.1:68301468-68301487 | MS.gene81572:CDS | 45.0% |
| ! | TCCAGGTAGCGTTTTCCAAT+TGG | - | chr5.1:68303288-68303307 | None:intergenic | 45.0% |
| ! | TTCTAACCTAAGGAGTGCAG+CGG | + | chr5.1:68302978-68302997 | MS.gene81572:intron | 45.0% |
| !! | ATGCTTGCTGACCCAGTTTT+TGG | - | chr5.1:68301821-68301840 | None:intergenic | 45.0% |
| !! | CCTGGGAGAGAATTTCTAGT+GGG | + | chr5.1:68301544-68301563 | MS.gene81572:CDS | 45.0% |
| !! | GGCTTTTTCTTGAGCCTTGA+AGG | - | chr5.1:68300384-68300403 | None:intergenic | 45.0% |
| !! | GTTATCGTTGACTCACAAGG+AGG | + | chr5.1:68300993-68301012 | MS.gene81572:CDS | 45.0% |
| !!! | CTAATTTCGTGCCGCTTTTG+TGG | + | chr5.1:68304257-68304276 | MS.gene81572:CDS | 45.0% |
| !!! | TATTTATATTTTCTTATAAA+CGG | - | chr5.1:68302921-68302940 | None:intergenic | 5.0% |
| !!! | TTAATTTAATAATTACTTTT+AGG | + | chr5.1:68300017-68300036 | MS.gene81572:intron | 5.0% |
| AAGCATCAGTTTGCCCCTTG+CGG | + | chr5.1:68304234-68304253 | MS.gene81572:CDS | 50.0% | |
| ACCTGTCAGCATGAAGGTTG+TGG | + | chr5.1:68301954-68301973 | MS.gene81572:CDS | 50.0% | |
| ACTGCACCCTGTGATTCTTG+TGG | + | chr5.1:68304368-68304387 | MS.gene81572:CDS | 50.0% | |
| AGCTTTCCAGCAGGCAGAAT+TGG | + | chr5.1:68302034-68302053 | MS.gene81572:CDS | 50.0% | |
| ATAGCAGCAACGAACCGCTA+CGG | + | chr5.1:68303075-68303094 | MS.gene81572:intron | 50.0% | |
| ATGGAGATTGCAGTTCCTGC+TGG | + | chr5.1:68302830-68302849 | MS.gene81572:intron | 50.0% | |
| CACTGCCGATGAATGTTCAG+TGG | + | chr5.1:68301083-68301102 | MS.gene81572:CDS | 50.0% | |
| CAGACCGGTACAGTAGATGA+AGG | + | chr5.1:68301483-68301502 | MS.gene81572:CDS | 50.0% | |
| CATGAGAAGACCACTCATGC+TGG | - | chr5.1:68301665-68301684 | None:intergenic | 50.0% | |
| CCCACTAGAAATTCTCTCCC+AGG | - | chr5.1:68301547-68301566 | None:intergenic | 50.0% | |
| GAGTCTTCTCGGTGGAAGAA+CGG | + | chr5.1:68300212-68300231 | MS.gene81572:intron | 50.0% | |
| TCCACAACCTTCATGCTGAC+AGG | - | chr5.1:68301958-68301977 | None:intergenic | 50.0% | |
| TGCCGCTGAAGCTCAACTTA+AGG | + | chr5.1:68299844-68299863 | MS.gene81572:CDS | 50.0% | |
| TGTGGTGATATGGTTCCAGC+TGG | + | chr5.1:68304275-68304294 | MS.gene81572:CDS | 50.0% | |
| TTCCGTGTCATCAATGGGGT+TGG | + | chr5.1:68301845-68301864 | MS.gene81572:CDS | 50.0% | |
| ! | AAGAGTTTGTTTCGCGGCGT+AGG | - | chr5.1:68303258-68303277 | None:intergenic | 50.0% |
| ! | GCTTTTCCAATTCTGCCTGC+TGG | - | chr5.1:68302043-68302062 | None:intergenic | 50.0% |
| ! | TCATCTACTGTACCGGTCTG+TGG | - | chr5.1:68301483-68301502 | None:intergenic | 50.0% |
| !! | ACGAGAGTGTTTGTGGGTCA+AGG | + | chr5.1:68304345-68304364 | MS.gene81572:CDS | 50.0% |
| !! | ATTCCACAAGGGCACTGAAG+TGG | - | chr5.1:68302086-68302105 | None:intergenic | 50.0% |
| !! | CAGAGCACGAGAGTGTTTGT+GGG | + | chr5.1:68304339-68304358 | MS.gene81572:CDS | 50.0% |
| !! | TCAGAGCACGAGAGTGTTTG+TGG | + | chr5.1:68304338-68304357 | MS.gene81572:CDS | 50.0% |
| !!! | GTGCCGCTTTTGTGGTGATA+TGG | + | chr5.1:68304265-68304284 | MS.gene81572:CDS | 50.0% |
| CACATTCACTGTGGCAGGTG+TGG | + | chr5.1:68302008-68302027 | MS.gene81572:CDS | 55.0% | |
| CGGCACGAAATTAGCCGCAA+GGG | - | chr5.1:68304251-68304270 | None:intergenic | 55.0% | |
| CTACACGACACCAGCATGAG+TGG | + | chr5.1:68301652-68301671 | MS.gene81572:CDS | 55.0% | |
| GATGCCCGTGACAGGTTAAG+AGG | + | chr5.1:68304311-68304330 | MS.gene81572:CDS | 55.0% | |
| GGCACGAAATTAGCCGCAAG+GGG | - | chr5.1:68304250-68304269 | None:intergenic | 55.0% | |
| GTGTGGTCAAGCTTTCCAGC+AGG | + | chr5.1:68302025-68302044 | MS.gene81572:CDS | 55.0% | |
| TAGCGGCCAACCCCAAAAGT+GGG | - | chr5.1:68303562-68303581 | None:intergenic | 55.0% | |
| TCCAGCTGGAAGCTCTGCAA+TGG | + | chr5.1:68304289-68304308 | MS.gene81572:CDS | 55.0% | |
| TCCATTGCAGAGCTTCCAGC+TGG | - | chr5.1:68304293-68304312 | None:intergenic | 55.0% | |
| TGGGTCTCCCTCCTCATGTA+TGG | + | chr5.1:68301103-68301122 | MS.gene81572:CDS | 55.0% | |
| TTAGGTCCGCTGCACTCCTT+AGG | - | chr5.1:68302987-68303006 | None:intergenic | 55.0% | |
| ! | GCTGCCGAAGACTTGTTTCG+AGG | - | chr5.1:68301266-68301285 | None:intergenic | 55.0% |
| ! | TAACGGATAGCGGTGCGTAG+CGG | - | chr5.1:68303579-68303598 | None:intergenic | 55.0% |
| !! | CACTCATGCTGGTGTCGTGT+AGG | - | chr5.1:68301654-68301673 | None:intergenic | 55.0% |
| !!! | CGCTATCCCACTTTTGGGGT+TGG | + | chr5.1:68303553-68303572 | MS.gene81572:intron | 55.0% |
| CTGCAATGGATGCCCGTGAC+AGG | + | chr5.1:68304303-68304322 | MS.gene81572:CDS | 60.0% | |
| GAGCCACTTCAGTGCCCTTG+TGG | + | chr5.1:68302080-68302099 | MS.gene81572:CDS | 60.0% | |
| GCGGCACGAAATTAGCCGCA+AGG | - | chr5.1:68304252-68304271 | None:intergenic | 60.0% | |
| GGTGCGGGGACTTACAGCAT+TGG | + | chr5.1:68301732-68301751 | MS.gene81572:CDS | 60.0% | |
| GTAGCGGCCAACCCCAAAAG+TGG | - | chr5.1:68303563-68303582 | None:intergenic | 60.0% | |
| GGCGCTATAGCGGCTGCGCG+TGG | + | chr5.1:68303051-68303070 | MS.gene81572:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 68299683 | 68304451 | 68299683 | ID=MS.gene81572 |
| chr5.1 | mRNA | 68299683 | 68304451 | 68299683 | ID=MS.gene81572.t1;Parent=MS.gene81572 |
| chr5.1 | exon | 68299683 | 68299865 | 68299683 | ID=MS.gene81572.t1.exon1;Parent=MS.gene81572.t1 |
| chr5.1 | CDS | 68299683 | 68299865 | 68299683 | ID=cds.MS.gene81572.t1;Parent=MS.gene81572.t1 |
| chr5.1 | exon | 68300823 | 68302127 | 68300823 | ID=MS.gene81572.t1.exon2;Parent=MS.gene81572.t1 |
| chr5.1 | CDS | 68300823 | 68302127 | 68300823 | ID=cds.MS.gene81572.t1;Parent=MS.gene81572.t1 |
| chr5.1 | exon | 68304224 | 68304451 | 68304224 | ID=MS.gene81572.t1.exon3;Parent=MS.gene81572.t1 |
| chr5.1 | CDS | 68304224 | 68304451 | 68304224 | ID=cds.MS.gene81572.t1;Parent=MS.gene81572.t1 |
| Gene Sequence |
| Protein sequence |
