Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81576.t1 | AES99923.1 | 70.1 | 201 | 54 | 2 | 5 | 199 | 1 | 201 | 4.50E-73 | 284.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81576.t1 | Q9SD53 | 37.3 | 153 | 90 | 4 | 30 | 181 | 44 | 191 | 7.8e-18 | 92.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81576.t1 | G7KCL4 | 70.1 | 201 | 54 | 2 | 5 | 199 | 1 | 201 | 3.2e-73 | 284.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051199 | MS.gene81576 | 0.810298 | 1.24E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene81576 | 0.814865 | 1.24E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene81576 | 0.812647 | 3.82E-51 | -1.69E-46 |
| MS.gene054801 | MS.gene81576 | 0.815336 | 9.74E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene81576 | 0.80155 | 8.54E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81576.t1 | MTR_5g086230 | 70.149 | 201 | 54 | 2 | 5 | 199 | 1 | 201 | 5.31e-103 | 295 |
| MS.gene81576.t1 | MTR_5g086340 | 67.539 | 191 | 60 | 1 | 1 | 189 | 1 | 191 | 1.15e-92 | 278 |
| MS.gene81576.t1 | MTR_5g087570 | 74.775 | 111 | 27 | 1 | 5 | 115 | 1 | 110 | 6.97e-56 | 173 |
| MS.gene81576.t1 | MTR_5g086300 | 49.206 | 189 | 35 | 2 | 1 | 189 | 1 | 128 | 2.58e-50 | 162 |
| MS.gene81576.t1 | MTR_8g042830 | 47.283 | 184 | 50 | 2 | 4 | 187 | 13 | 149 | 2.09e-49 | 166 |
| MS.gene81576.t1 | MTR_5g016570 | 35.882 | 170 | 97 | 4 | 24 | 187 | 93 | 256 | 4.26e-29 | 113 |
| MS.gene81576.t1 | MTR_8g005235 | 32.353 | 170 | 104 | 6 | 25 | 190 | 20 | 182 | 4.64e-19 | 84.3 |
| MS.gene81576.t1 | MTR_3g466740 | 31.720 | 186 | 118 | 5 | 9 | 188 | 5 | 187 | 2.56e-18 | 82.4 |
| MS.gene81576.t1 | MTR_3g079390 | 30.052 | 193 | 115 | 6 | 1 | 184 | 4 | 185 | 3.49e-18 | 82.0 |
| MS.gene81576.t1 | MTR_2g041180 | 30.366 | 191 | 97 | 6 | 7 | 184 | 30 | 197 | 4.60e-18 | 81.6 |
| MS.gene81576.t1 | MTR_8g005285 | 30.601 | 183 | 99 | 5 | 25 | 184 | 29 | 206 | 3.48e-17 | 79.3 |
| MS.gene81576.t1 | MTR_2g036320 | 32.418 | 182 | 105 | 6 | 7 | 184 | 47 | 214 | 4.43e-17 | 79.0 |
| MS.gene81576.t1 | MTR_0209s0060 | 33.728 | 169 | 99 | 8 | 18 | 181 | 16 | 176 | 2.73e-16 | 76.6 |
| MS.gene81576.t1 | MTR_0209s0030 | 33.728 | 169 | 99 | 8 | 18 | 181 | 16 | 176 | 2.73e-16 | 76.6 |
| MS.gene81576.t1 | MTR_7g067940 | 32.000 | 175 | 110 | 5 | 13 | 184 | 12 | 180 | 3.05e-16 | 76.6 |
| MS.gene81576.t1 | MTR_0067s0010 | 30.052 | 193 | 110 | 7 | 5 | 187 | 22 | 199 | 3.90e-16 | 76.3 |
| MS.gene81576.t1 | MTR_7g068070 | 33.758 | 157 | 95 | 5 | 33 | 183 | 30 | 183 | 8.59e-16 | 75.1 |
| MS.gene81576.t1 | MTR_8g005225 | 33.523 | 176 | 98 | 7 | 11 | 183 | 25 | 184 | 2.64e-15 | 73.9 |
| MS.gene81576.t1 | MTR_8g005265 | 34.615 | 156 | 91 | 4 | 30 | 181 | 25 | 173 | 2.70e-15 | 73.6 |
| MS.gene81576.t1 | MTR_8g006525 | 30.909 | 165 | 105 | 5 | 29 | 190 | 25 | 183 | 3.44e-15 | 73.2 |
| MS.gene81576.t1 | MTR_8g005325 | 32.919 | 161 | 97 | 6 | 25 | 181 | 49 | 202 | 4.03e-15 | 73.2 |
| MS.gene81576.t1 | MTR_8g005295 | 30.233 | 172 | 92 | 5 | 33 | 181 | 37 | 203 | 5.01e-15 | 73.2 |
| MS.gene81576.t1 | MTR_0024s0080 | 28.859 | 149 | 94 | 3 | 30 | 178 | 23 | 159 | 6.36e-15 | 72.4 |
| MS.gene81576.t1 | MTR_6g011060 | 30.137 | 146 | 90 | 3 | 33 | 178 | 26 | 159 | 2.73e-14 | 70.9 |
| MS.gene81576.t1 | MTR_6g009170 | 33.645 | 107 | 60 | 2 | 33 | 135 | 26 | 125 | 8.94e-14 | 69.3 |
| MS.gene81576.t1 | MTR_7g068160 | 33.333 | 165 | 90 | 7 | 33 | 184 | 37 | 194 | 1.30e-13 | 68.9 |
| MS.gene81576.t1 | MTR_6g011050 | 28.188 | 149 | 97 | 3 | 30 | 178 | 22 | 160 | 3.43e-13 | 67.4 |
| MS.gene81576.t1 | MTR_4g009620 | 28.125 | 160 | 105 | 4 | 33 | 185 | 43 | 199 | 9.05e-13 | 66.6 |
| MS.gene81576.t1 | MTR_6g010890 | 28.378 | 148 | 96 | 4 | 33 | 178 | 26 | 165 | 9.98e-13 | 66.2 |
| MS.gene81576.t1 | MTR_4g009590 | 26.667 | 165 | 110 | 4 | 33 | 189 | 43 | 204 | 1.56e-12 | 65.9 |
| MS.gene81576.t1 | MTR_7g067660 | 30.435 | 161 | 98 | 7 | 33 | 181 | 17 | 175 | 2.36e-12 | 65.1 |
| MS.gene81576.t1 | MTR_7g067750 | 31.056 | 161 | 99 | 6 | 33 | 184 | 64 | 221 | 2.67e-12 | 65.1 |
| MS.gene81576.t1 | MTR_6g009590 | 23.784 | 185 | 129 | 2 | 15 | 199 | 8 | 180 | 3.22e-12 | 64.7 |
| MS.gene81576.t1 | MTR_6g010920 | 25.455 | 165 | 111 | 3 | 30 | 194 | 23 | 175 | 3.60e-12 | 64.7 |
| MS.gene81576.t1 | MTR_7g067880 | 29.268 | 164 | 98 | 7 | 30 | 181 | 27 | 184 | 5.30e-12 | 64.3 |
| MS.gene81576.t1 | MTR_4g009340 | 28.302 | 159 | 103 | 4 | 33 | 183 | 43 | 198 | 6.57e-12 | 63.9 |
| MS.gene81576.t1 | MTR_6g009610 | 25.325 | 154 | 103 | 3 | 25 | 178 | 18 | 159 | 2.04e-11 | 62.4 |
| MS.gene81576.t1 | MTR_7g017620 | 26.415 | 159 | 106 | 3 | 33 | 183 | 42 | 197 | 5.78e-11 | 61.2 |
| MS.gene81576.t1 | MTR_8g042080 | 30.263 | 152 | 87 | 6 | 34 | 174 | 26 | 169 | 8.62e-11 | 58.5 |
| MS.gene81576.t1 | MTR_6g010810 | 28.221 | 163 | 103 | 5 | 18 | 178 | 8 | 158 | 8.92e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81576.t1 | AT3G50170 | 40.588 | 170 | 91 | 3 | 24 | 189 | 105 | 268 | 4.52e-39 | 139 |
| MS.gene81576.t1 | AT3G50170 | 40.588 | 170 | 91 | 3 | 24 | 189 | 105 | 268 | 1.10e-38 | 139 |
| MS.gene81576.t1 | AT3G50140 | 34.759 | 187 | 107 | 4 | 7 | 189 | 93 | 268 | 7.25e-37 | 132 |
| MS.gene81576.t1 | AT3G50150 | 39.645 | 169 | 93 | 3 | 24 | 188 | 82 | 245 | 1.35e-36 | 132 |
| MS.gene81576.t1 | AT3G50150 | 39.645 | 169 | 93 | 3 | 24 | 188 | 82 | 245 | 2.27e-36 | 132 |
| MS.gene81576.t1 | AT3G50140 | 38.182 | 165 | 92 | 3 | 29 | 189 | 110 | 268 | 2.79e-36 | 133 |
| MS.gene81576.t1 | AT3G50120 | 38.235 | 170 | 95 | 3 | 24 | 189 | 95 | 258 | 5.78e-36 | 132 |
| MS.gene81576.t1 | AT3G50130 | 38.095 | 168 | 94 | 3 | 24 | 187 | 131 | 292 | 4.72e-35 | 130 |
| MS.gene81576.t1 | AT3G50180 | 40.588 | 170 | 91 | 4 | 24 | 189 | 170 | 333 | 5.89e-35 | 129 |
| MS.gene81576.t1 | AT3G50190 | 34.682 | 173 | 98 | 4 | 7 | 175 | 76 | 237 | 1.30e-32 | 120 |
| MS.gene81576.t1 | AT3G50190 | 34.682 | 173 | 98 | 4 | 7 | 175 | 76 | 237 | 1.54e-32 | 120 |
| MS.gene81576.t1 | AT3G50190 | 34.682 | 173 | 98 | 4 | 7 | 175 | 76 | 237 | 1.54e-32 | 120 |
| MS.gene81576.t1 | AT3G50160 | 35.484 | 186 | 101 | 5 | 7 | 185 | 82 | 255 | 2.00e-32 | 122 |
| MS.gene81576.t1 | AT3G50190 | 34.682 | 173 | 98 | 4 | 7 | 175 | 76 | 237 | 5.36e-32 | 120 |
| MS.gene81576.t1 | AT3G47250 | 37.255 | 153 | 85 | 5 | 34 | 181 | 63 | 209 | 1.25e-26 | 105 |
| MS.gene81576.t1 | AT3G47250 | 37.255 | 153 | 85 | 5 | 34 | 181 | 63 | 209 | 1.25e-26 | 105 |
| MS.gene81576.t1 | AT3G47250 | 37.255 | 153 | 85 | 5 | 34 | 181 | 63 | 209 | 1.25e-26 | 105 |
| MS.gene81576.t1 | AT3G47210 | 33.714 | 175 | 108 | 4 | 9 | 181 | 70 | 238 | 3.71e-25 | 102 |
| MS.gene81576.t1 | AT2G36430 | 36.250 | 160 | 88 | 4 | 33 | 187 | 46 | 196 | 2.32e-24 | 99.4 |
| MS.gene81576.t1 | AT5G22550 | 36.250 | 160 | 89 | 6 | 33 | 185 | 45 | 198 | 6.69e-24 | 98.6 |
| MS.gene81576.t1 | AT3G44710 | 38.028 | 142 | 76 | 6 | 46 | 181 | 62 | 197 | 9.59e-24 | 98.2 |
| MS.gene81576.t1 | AT5G22540 | 32.461 | 191 | 103 | 6 | 10 | 185 | 4 | 183 | 2.76e-23 | 96.3 |
| MS.gene81576.t1 | AT4G31980 | 32.353 | 170 | 103 | 5 | 31 | 194 | 292 | 455 | 6.47e-23 | 95.9 |
| MS.gene81576.t1 | AT3G47200 | 36.709 | 158 | 94 | 4 | 25 | 181 | 39 | 191 | 3.16e-22 | 93.6 |
| MS.gene81576.t1 | AT3G47200 | 36.709 | 158 | 94 | 4 | 25 | 181 | 39 | 191 | 3.16e-22 | 93.6 |
| MS.gene81576.t1 | AT3G44700 | 35.878 | 131 | 76 | 5 | 30 | 152 | 46 | 176 | 2.38e-19 | 82.4 |
| MS.gene81576.t1 | AT5G11290 | 30.409 | 171 | 109 | 4 | 9 | 178 | 13 | 174 | 7.39e-18 | 80.9 |
| MS.gene81576.t1 | AT5G22560 | 29.825 | 171 | 95 | 6 | 33 | 184 | 48 | 212 | 7.22e-15 | 72.8 |
Find 34 sgRNAs with CRISPR-Local
Find 42 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCTTCATTTCCTAAAA+AGG | 0.187688 | 5.1:+68261776 | MS.gene81576:CDS |
| GATCCTGTCTTTAGTTTATA+TGG | 0.197350 | 5.1:+68261988 | MS.gene81576:CDS |
| ATAAGTCATTTGATTCGATT+TGG | 0.291445 | 5.1:+68261866 | MS.gene81576:CDS |
| TGGCACTGAGGTAATATTAA+TGG | 0.314484 | 5.1:+68262107 | MS.gene81576:CDS |
| GGTTCTTCATACGTTGATTC+AGG | 0.318291 | 5.1:+68262077 | MS.gene81576:CDS |
| AGGTCCAAATGAAATTGTTC+GGG | 0.346218 | 5.1:-68261701 | None:intergenic |
| AAACCCCGAACAATTTCATT+TGG | 0.363920 | 5.1:+68261697 | MS.gene81576:CDS |
| ACATGGAGTTAGAAATGAAT+TGG | 0.393412 | 5.1:+68261548 | None:intergenic |
| ATTCAAATGATGATTATTGA+TGG | 0.405805 | 5.1:+68261910 | MS.gene81576:CDS |
| TGAAATTGTTCGGGGTTTGT+AGG | 0.409252 | 5.1:-68261692 | None:intergenic |
| AAGGTCCAAATGAAATTGTT+CGG | 0.418389 | 5.1:-68261702 | None:intergenic |
| TTGGTTTGATCAAATCAATA+AGG | 0.423164 | 5.1:+68261567 | MS.gene81576:CDS |
| CGATGCTTGTGCTCTTCCAT+AGG | 0.436817 | 5.1:-68261751 | None:intergenic |
| TCATTTGGACCTTACCATCA+TGG | 0.460295 | 5.1:+68261712 | MS.gene81576:CDS |
| ACGTTGATTCAGGTTCAAAC+TGG | 0.460312 | 5.1:+68262087 | MS.gene81576:CDS |
| GGAGGACAATTTAAAGCCTA+TGG | 0.467185 | 5.1:+68261735 | MS.gene81576:CDS |
| CATTTGGACCTTACCATCAT+GGG | 0.492283 | 5.1:+68261713 | MS.gene81576:CDS |
| TTTCCATATAAACTAAAGAC+AGG | 0.505866 | 5.1:-68261991 | None:intergenic |
| TTAAATTGTCCTCCCCATGA+TGG | 0.525645 | 5.1:-68261726 | None:intergenic |
| AACGTATGAAGAACCGTCAT+AGG | 0.532012 | 5.1:-68262069 | None:intergenic |
| AGCTGATGAGAAGAAGCAAT+GGG | 0.537660 | 5.1:+68261615 | MS.gene81576:CDS |
| TTGTCCTCCCCATGATGGTA+AGG | 0.541423 | 5.1:-68261721 | None:intergenic |
| TTCAACTCCGTGACTTGTGA+GGG | 0.542571 | 5.1:-68261661 | None:intergenic |
| GTTCAACTCCGTGACTTGTG+AGG | 0.545369 | 5.1:-68261662 | None:intergenic |
| TCCTCTTGACTATGATCAGA+AGG | 0.545995 | 5.1:+68261966 | MS.gene81576:CDS |
| CAAAGTACCCTCACAAGTCA+CGG | 0.580405 | 5.1:+68261654 | MS.gene81576:CDS |
| TAGCTGATGAGAAGAAGCAA+TGG | 0.608374 | 5.1:+68261614 | MS.gene81576:CDS |
| TCCTTCTGATCATAGTCAAG+AGG | 0.620363 | 5.1:-68261967 | None:intergenic |
| ATTTGGACCTTACCATCATG+GGG | 0.624331 | 5.1:+68261714 | MS.gene81576:CDS |
| TGAGAATCAGATACCTATGA+CGG | 0.632242 | 5.1:+68262056 | MS.gene81576:CDS |
| GGTCCAAATGAAATTGTTCG+GGG | 0.644074 | 5.1:-68261700 | None:intergenic |
| TTTGATTCGATTTGGACACA+TGG | 0.660066 | 5.1:+68261874 | MS.gene81576:CDS |
| TGGACCTTACCATCATGGGG+AGG | 0.685510 | 5.1:+68261717 | MS.gene81576:CDS |
| TCAGGTTCAAACTGGCACTG+AGG | 0.722569 | 5.1:+68262095 | MS.gene81576:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCAAATGATGATTATTGA+TGG | + | chr5.1:68261910-68261929 | MS.gene81576:CDS | 20.0% |
| !! | TGAATTGATATTCCAAAAAT+TGG | + | chr5.1:68261813-68261832 | MS.gene81576:CDS | 20.0% |
| !!! | TTTTGGAATATCAATTCAAT+GGG | - | chr5.1:68261811-68261830 | None:intergenic | 20.0% |
| !!! | TTTTTGGAATATCAATTCAA+TGG | - | chr5.1:68261812-68261831 | None:intergenic | 20.0% |
| ! | TTTCCATATAAACTAAAGAC+AGG | - | chr5.1:68261994-68262013 | None:intergenic | 25.0% |
| !! | ATAAGTCATTTGATTCGATT+TGG | + | chr5.1:68261866-68261885 | MS.gene81576:CDS | 25.0% |
| !! | TTGGTTTGATCAAATCAATA+AGG | + | chr5.1:68261567-68261586 | MS.gene81576:CDS | 25.0% |
| AAGGTCCAAATGAAATTGTT+CGG | - | chr5.1:68261705-68261724 | None:intergenic | 30.0% | |
| ATTCCAAAAATTGGATCAAG+TGG | + | chr5.1:68261822-68261841 | MS.gene81576:CDS | 30.0% | |
| ! | GATCCTGTCTTTAGTTTATA+TGG | + | chr5.1:68261988-68262007 | MS.gene81576:CDS | 30.0% |
| !! | ACCTTTTTAGGAAATGAAGA+AGG | - | chr5.1:68261780-68261799 | None:intergenic | 30.0% |
| !! | CCTTTTTAGGAAATGAAGAA+GGG | - | chr5.1:68261779-68261798 | None:intergenic | 30.0% |
| AAACCCCGAACAATTTCATT+TGG | + | chr5.1:68261697-68261716 | MS.gene81576:CDS | 35.0% | |
| AGGTCCAAATGAAATTGTTC+GGG | - | chr5.1:68261704-68261723 | None:intergenic | 35.0% | |
| CCCTTCTTCATTTCCTAAAA+AGG | + | chr5.1:68261776-68261795 | MS.gene81576:CDS | 35.0% | |
| CTTCATTTCCTAAAAAGGTG+TGG | + | chr5.1:68261781-68261800 | MS.gene81576:CDS | 35.0% | |
| TGAGAATCAGATACCTATGA+CGG | + | chr5.1:68262056-68262075 | MS.gene81576:CDS | 35.0% | |
| ! | TGGCACTGAGGTAATATTAA+TGG | + | chr5.1:68262107-68262126 | MS.gene81576:CDS | 35.0% |
| !! | TTTGATTCGATTTGGACACA+TGG | + | chr5.1:68261874-68261893 | MS.gene81576:CDS | 35.0% |
| AACGTATGAAGAACCGTCAT+AGG | - | chr5.1:68262072-68262091 | None:intergenic | 40.0% | |
| AGCTGATGAGAAGAAGCAAT+GGG | + | chr5.1:68261615-68261634 | MS.gene81576:CDS | 40.0% | |
| ATTTGGACCTTACCATCATG+GGG | + | chr5.1:68261714-68261733 | MS.gene81576:CDS | 40.0% | |
| CATTTGGACCTTACCATCAT+GGG | + | chr5.1:68261713-68261732 | MS.gene81576:CDS | 40.0% | |
| GGTCCAAATGAAATTGTTCG+GGG | - | chr5.1:68261703-68261722 | None:intergenic | 40.0% | |
| TAGCTGATGAGAAGAAGCAA+TGG | + | chr5.1:68261614-68261633 | MS.gene81576:CDS | 40.0% | |
| TCATTTGGACCTTACCATCA+TGG | + | chr5.1:68261712-68261731 | MS.gene81576:CDS | 40.0% | |
| TCCTCTTGACTATGATCAGA+AGG | + | chr5.1:68261966-68261985 | MS.gene81576:CDS | 40.0% | |
| TCCTTCTGATCATAGTCAAG+AGG | - | chr5.1:68261970-68261989 | None:intergenic | 40.0% | |
| TGAAATTGTTCGGGGTTTGT+AGG | - | chr5.1:68261695-68261714 | None:intergenic | 40.0% | |
| TTAAATTGTCCTCCCCATGA+TGG | - | chr5.1:68261729-68261748 | None:intergenic | 40.0% | |
| ! | GAGCCACTTGATCCAATTTT+TGG | - | chr5.1:68261828-68261847 | None:intergenic | 40.0% |
| ! | GGAGGACAATTTAAAGCCTA+TGG | + | chr5.1:68261735-68261754 | MS.gene81576:CDS | 40.0% |
| ! | TGGGTTTTCCACACCTTTTT+AGG | - | chr5.1:68261792-68261811 | None:intergenic | 40.0% |
| !! | ACGTTGATTCAGGTTCAAAC+TGG | + | chr5.1:68262087-68262106 | MS.gene81576:CDS | 40.0% |
| !! | GGTTCTTCATACGTTGATTC+AGG | + | chr5.1:68262077-68262096 | MS.gene81576:CDS | 40.0% |
| ! | CAAAGTACCCTCACAAGTCA+CGG | + | chr5.1:68261654-68261673 | MS.gene81576:CDS | 45.0% |
| ! | TTCAACTCCGTGACTTGTGA+GGG | - | chr5.1:68261664-68261683 | None:intergenic | 45.0% |
| CGATGCTTGTGCTCTTCCAT+AGG | - | chr5.1:68261754-68261773 | None:intergenic | 50.0% | |
| TCAGGTTCAAACTGGCACTG+AGG | + | chr5.1:68262095-68262114 | MS.gene81576:CDS | 50.0% | |
| TTGTCCTCCCCATGATGGTA+AGG | - | chr5.1:68261724-68261743 | None:intergenic | 50.0% | |
| ! | GTTCAACTCCGTGACTTGTG+AGG | - | chr5.1:68261665-68261684 | None:intergenic | 50.0% |
| TGGACCTTACCATCATGGGG+AGG | + | chr5.1:68261717-68261736 | MS.gene81576:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 68261550 | 68262149 | 68261550 | ID=MS.gene81576 |
| chr5.1 | mRNA | 68261550 | 68262149 | 68261550 | ID=MS.gene81576.t1;Parent=MS.gene81576 |
| chr5.1 | exon | 68261550 | 68262149 | 68261550 | ID=MS.gene81576.t1.exon1;Parent=MS.gene81576.t1 |
| chr5.1 | CDS | 68261550 | 68262149 | 68261550 | ID=cds.MS.gene81576.t1;Parent=MS.gene81576.t1 |
| Gene Sequence |
| Protein sequence |
