Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81596.t1 | XP_003616940.1 | 92.4 | 1139 | 86 | 0 | 1 | 1139 | 1 | 1139 | 0.00E+00 | 2040.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81596.t1 | Q0WVF8 | 44.6 | 1156 | 598 | 11 | 1 | 1137 | 2 | 1133 | 3.5e-264 | 912.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81596.t1 | G7K7L4 | 92.4 | 1139 | 86 | 0 | 1 | 1139 | 1 | 1139 | 0.0e+00 | 2040.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene94650 | MS.gene81596 | PPI |
| MS.gene81596 | MS.gene91488 | PPI |
| MS.gene35361 | MS.gene81596 | PPI |
| MS.gene073095 | MS.gene81596 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81596.t1 | MTR_5g085950 | 92.450 | 1139 | 86 | 0 | 1 | 1139 | 1 | 1139 | 0.0 | 2090 |
| MS.gene81596.t1 | MTR_2g100870 | 86.140 | 1140 | 157 | 1 | 1 | 1139 | 1 | 1140 | 0.0 | 1959 |
| MS.gene81596.t1 | MTR_5g055460 | 77.083 | 48 | 11 | 0 | 175 | 222 | 17 | 64 | 5.17e-18 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81596.t1 | AT5G48120 | 44.502 | 1155 | 600 | 12 | 1 | 1137 | 2 | 1133 | 0.0 | 915 |
| MS.gene81596.t1 | AT5G48120 | 44.502 | 1155 | 600 | 12 | 1 | 1137 | 2 | 1133 | 0.0 | 915 |
| MS.gene81596.t1 | AT5G48120 | 44.502 | 1155 | 600 | 12 | 1 | 1137 | 2 | 1133 | 0.0 | 915 |
Find 209 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGAAGCCCTCTTATATT+TGG | 0.180661 | 5.1:-67852034 | None:intergenic |
| AAAATACTGAAGAGCATAAA+TGG | 0.184927 | 5.1:+67852464 | MS.gene81596:CDS |
| GCAGCTCATGCCAGTTCTTC+TGG | 0.201051 | 5.1:+67853106 | MS.gene81596:intron |
| ATGTTCTCAAATGTTGATTT+TGG | 0.210187 | 5.1:-67850642 | None:intergenic |
| CTCCACCAAATAGGTATTTA+TGG | 0.212231 | 5.1:-67849482 | None:intergenic |
| ACTAAGAATGATGGATAGTT+TGG | 0.215757 | 5.1:+67849801 | MS.gene81596:CDS |
| TGAAACTGCTGTTCAGCTTT+TGG | 0.218439 | 5.1:+67851178 | MS.gene81596:CDS |
| CAAAATATGTTGGGGCTATT+TGG | 0.229017 | 5.1:+67849443 | MS.gene81596:CDS |
| TCAATTACAACTTCATTCTT+TGG | 0.231489 | 5.1:-67849550 | None:intergenic |
| CATAAGACGTTAAATTTCTA+TGG | 0.235132 | 5.1:-67851157 | None:intergenic |
| ACTTCTAATTTGAGTGAAAA+AGG | 0.246410 | 5.1:-67850855 | None:intergenic |
| TCCCCATTGTGCAGCTTGTT+CGG | 0.273499 | 5.1:+67854086 | MS.gene81596:intron |
| ATATTTGGAACGTGTGCTTT+GGG | 0.276627 | 5.1:-67852019 | None:intergenic |
| TGTTCCAGTTGCACAGGCTT+TGG | 0.282641 | 5.1:+67852087 | MS.gene81596:CDS |
| GTTCCAGTTGCACAGGCTTT+GGG | 0.289048 | 5.1:+67852088 | MS.gene81596:CDS |
| CCCCATTGTGCAGCTTGTTC+GGG | 0.296076 | 5.1:+67854087 | MS.gene81596:intron |
| AGACACCATAAATACCTATT+TGG | 0.302273 | 5.1:+67849477 | MS.gene81596:CDS |
| AACTTGCAGGTTCAATCTTT+AGG | 0.308558 | 5.1:+67846049 | MS.gene81596:CDS |
| TTGAAATCATTATTTCATAT+TGG | 0.321286 | 5.1:+67850729 | MS.gene81596:CDS |
| GGAGGATTGCCATTGACTTT+TGG | 0.329070 | 5.1:+67851926 | MS.gene81596:CDS |
| AAAACAAGCATTAAACATTC+TGG | 0.332262 | 5.1:-67847060 | None:intergenic |
| TTCTCTGCAGGTTTCAAGCT+TGG | 0.333213 | 5.1:+67844650 | MS.gene81596:intron |
| ATAGCTTGGTTGGGTTCTTC+AGG | 0.334626 | 5.1:+67845666 | MS.gene81596:CDS |
| TATATTTGGAACGTGTGCTT+TGG | 0.335893 | 5.1:-67852020 | None:intergenic |
| TTAGAAGTATTATCTGATAT+TGG | 0.336307 | 5.1:+67850870 | MS.gene81596:CDS |
| GGGCTGGAAAGAGCGATATT+TGG | 0.338697 | 5.1:+67850930 | MS.gene81596:CDS |
| AGAGCATAAATGGGATCTTT+TGG | 0.340308 | 5.1:+67852474 | MS.gene81596:CDS |
| GAGCCCAAAGCCTGTGCAAC+TGG | 0.345968 | 5.1:-67852091 | None:intergenic |
| GTTTCAAGCTTGGATGCAAT+TGG | 0.346172 | 5.1:+67844660 | MS.gene81596:CDS |
| TTCTTCAGGAATTCTTCTTC+TGG | 0.346745 | 5.1:+67845592 | MS.gene81596:intron |
| TGCACAGGCTTTGGGCTCTA+TGG | 0.350591 | 5.1:+67852096 | MS.gene81596:CDS |
| TGGGTTGCTTGGAACTTATA+AGG | 0.358042 | 5.1:+67845960 | MS.gene81596:CDS |
| GAAATCTGGCTCCACCAAAT+AGG | 0.361190 | 5.1:-67849491 | None:intergenic |
| AGAGTGTGCTCTTCCAAGTA+TGG | 0.362079 | 5.1:+67849406 | MS.gene81596:CDS |
| CATACAAGATATCTTTATCT+TGG | 0.362497 | 5.1:-67853157 | None:intergenic |
| CTGGGCAGGATCCTTGAAAA+TGG | 0.368274 | 5.1:+67851416 | MS.gene81596:intron |
| ACTTTGAAACACGGCATTGC+AGG | 0.370408 | 5.1:-67849773 | None:intergenic |
| AGTTCCTTGCCTTTGATTGA+AGG | 0.371015 | 5.1:+67852433 | MS.gene81596:CDS |
| ACTTCAACAAAACAATACTA+TGG | 0.376528 | 5.1:+67850697 | MS.gene81596:CDS |
| TGCCGATTCAGTTGCCTCAT+TGG | 0.376819 | 5.1:+67846394 | MS.gene81596:CDS |
| TCACCTCCAATGTATATATC+AGG | 0.379956 | 5.1:-67850060 | None:intergenic |
| AGTGAAGGGCTTGCAGATTC+TGG | 0.384723 | 5.1:+67850590 | MS.gene81596:intron |
| CCAATGTATATATCAGGATC+AGG | 0.387226 | 5.1:-67850054 | None:intergenic |
| ATCTGAGGAACTATGAAGTA+TGG | 0.392406 | 5.1:-67849977 | None:intergenic |
| GTAGTTCTATACAGAGATAA+AGG | 0.399321 | 5.1:-67849897 | None:intergenic |
| ATGCAGTTTGTGGGCTCTCA+TGG | 0.409981 | 5.1:+67852323 | MS.gene81596:CDS |
| AAAATATTGAGCAATGGCTT+TGG | 0.410682 | 5.1:-67846020 | None:intergenic |
| CTAAGAATGATGGATAGTTT+GGG | 0.411335 | 5.1:+67849802 | MS.gene81596:CDS |
| ATCTTTCAGCTTAATGATGT+TGG | 0.411614 | 5.1:+67851905 | MS.gene81596:CDS |
| TATTTATAATCAGGCAGATT+GGG | 0.419519 | 5.1:+67845916 | MS.gene81596:intron |
| CTCTTCCACTTCAACTCTCC+AGG | 0.421372 | 5.1:+67843945 | MS.gene81596:CDS |
| TAATTCTCCATTTGAAGAAA+AGG | 0.421895 | 5.1:+67851508 | MS.gene81596:CDS |
| AGAGAATCGCAAAATATGTT+GGG | 0.432517 | 5.1:+67849434 | MS.gene81596:CDS |
| CACACCTCTTGACCGAATTA+CGG | 0.435522 | 5.1:-67844878 | None:intergenic |
| AAGTGATGTGGGTATGGTAA+TGG | 0.437368 | 5.1:+67845988 | MS.gene81596:CDS |
| CTTCAACAAATACCGTAATT+CGG | 0.440067 | 5.1:+67844866 | MS.gene81596:CDS |
| GACAAGCAATCCAGAAGAAC+TGG | 0.440725 | 5.1:-67853116 | None:intergenic |
| CTTCAAACCAATGCAGTTTG+TGG | 0.440773 | 5.1:+67852313 | MS.gene81596:CDS |
| TATACTGAATGAAGCTAAAG+AGG | 0.446254 | 5.1:+67852987 | MS.gene81596:CDS |
| TAGCTTGGTTGGGTTCTTCA+GGG | 0.446497 | 5.1:+67845667 | MS.gene81596:CDS |
| AGTGATGTGGGTATGGTAAT+GGG | 0.450945 | 5.1:+67845989 | MS.gene81596:CDS |
| AGGAATTCTTCTTCTGGCAG+AGG | 0.451191 | 5.1:+67845598 | MS.gene81596:intron |
| AAAACTATACATAGCTTGGT+TGG | 0.451872 | 5.1:+67845656 | MS.gene81596:CDS |
| GGGTGTTGTTCCAGTTGCAC+AGG | 0.458087 | 5.1:+67852081 | MS.gene81596:CDS |
| AAACTCATTTCAAAATTCAA+TGG | 0.459754 | 5.1:+67852124 | MS.gene81596:CDS |
| GTTAACTGAATGGGAAAGTA+AGG | 0.461803 | 5.1:-67847171 | None:intergenic |
| CAAGATAAAGATATCTTGTA+TGG | 0.465086 | 5.1:+67853158 | MS.gene81596:CDS |
| AATCCATGCAATTTCCTGCC+TGG | 0.465330 | 5.1:-67851484 | None:intergenic |
| GCACACGTTCCAAATATAAG+AGG | 0.465840 | 5.1:+67852025 | MS.gene81596:CDS |
| GCTAGAGTAAAAGAGAAATC+TGG | 0.469250 | 5.1:-67849505 | None:intergenic |
| AAGAAGAAAGTTTCTGAAGA+AGG | 0.469520 | 5.1:-67849223 | None:intergenic |
| GACATCTCCCGTAGGGATGA+AGG | 0.469709 | 5.1:+67851956 | MS.gene81596:CDS |
| CGATTATATCCTGATCCATC+TGG | 0.470202 | 5.1:+67847105 | MS.gene81596:CDS |
| TTTCAAGCTTGGATGCAATT+GGG | 0.472760 | 5.1:+67844661 | MS.gene81596:CDS |
| GGGCTCTCATGGATTGGAAA+AGG | 0.473984 | 5.1:+67852334 | MS.gene81596:CDS |
| TAGAACTACTAGCAGGATGC+AGG | 0.474197 | 5.1:+67849911 | MS.gene81596:CDS |
| TTATCTGATATTGGCATGAC+TGG | 0.475419 | 5.1:+67850879 | MS.gene81596:CDS |
| TGAGATCAACTGCAGAAAGA+TGG | 0.476147 | 5.1:-67852620 | None:intergenic |
| CTGGAGAGTTGAAGTGGAAG+AGG | 0.476984 | 5.1:-67843944 | None:intergenic |
| TTCAAACCAATGCAGTTTGT+GGG | 0.477711 | 5.1:+67852314 | MS.gene81596:CDS |
| ATATTTATAATCAGGCAGAT+TGG | 0.478388 | 5.1:+67845915 | MS.gene81596:intron |
| GAAAATTTCATGCCACGATA+CGG | 0.478982 | 5.1:+67852560 | MS.gene81596:CDS |
| TGCAAAGAGATGACCTATCT+AGG | 0.480403 | 5.1:+67847486 | MS.gene81596:CDS |
| TATGTGATGGATCAAGTAAT+GGG | 0.481857 | 5.1:+67852239 | MS.gene81596:CDS |
| GATTCTCTCTGATCCATACT+TGG | 0.482212 | 5.1:-67849419 | None:intergenic |
| AAACTATACATAGCTTGGTT+GGG | 0.482444 | 5.1:+67845657 | MS.gene81596:CDS |
| CTGTCAAATGTCGGCAAGCA+TGG | 0.485151 | 5.1:+67854431 | MS.gene81596:CDS |
| TCATGTGAACCTTCAATCAA+AGG | 0.485416 | 5.1:-67852442 | None:intergenic |
| GAGGAAAAGTGATGTGGGTA+TGG | 0.486473 | 5.1:+67845982 | MS.gene81596:CDS |
| TTTCAGCTTAATGATGTTGG+AGG | 0.487070 | 5.1:+67851908 | MS.gene81596:CDS |
| ACATCAAAATCGAAGACTCC+TGG | 0.487975 | 5.1:-67854575 | None:intergenic |
| CTGCAGAAAGATGGGCATCA+TGG | 0.490694 | 5.1:-67852611 | None:intergenic |
| TGTTAGTAACATTGATGGCT+CGG | 0.491260 | 5.1:+67849831 | MS.gene81596:CDS |
| CAAAATTTAGGTTAGAGAGT+TGG | 0.491451 | 5.1:+67844831 | MS.gene81596:intron |
| TACCAATGAGGCAACTGAAT+CGG | 0.492157 | 5.1:-67846396 | None:intergenic |
| GCAGTACGAGGTGCACTTGT+GGG | 0.492437 | 5.1:+67845941 | MS.gene81596:CDS |
| CACGGCATTGCAGGAAGGAA+TGG | 0.494774 | 5.1:-67849764 | None:intergenic |
| AATCTTTAGGAATGTATGAC+AGG | 0.496654 | 5.1:+67846062 | MS.gene81596:CDS |
| GAGAGAATCGCAAAATATGT+TGG | 0.497138 | 5.1:+67849433 | MS.gene81596:CDS |
| GTTTGTGGGCTCTCATGGAT+TGG | 0.499724 | 5.1:+67852328 | MS.gene81596:CDS |
| TGGGTTCTTCAGGGAAAGAC+TGG | 0.501067 | 5.1:+67845676 | MS.gene81596:CDS |
| GCAAATAGACCAGATGGATC+AGG | 0.505582 | 5.1:-67847114 | None:intergenic |
| TGCAGCTATAGATGCAGAAA+GGG | 0.509949 | 5.1:+67847035 | MS.gene81596:CDS |
| AACATCATTAAGCTGAAAGA+TGG | 0.513197 | 5.1:-67851903 | None:intergenic |
| GCAGGAAGGAATGGAAGTCT+TGG | 0.514261 | 5.1:-67849755 | None:intergenic |
| CACAATAAGCTGCTGAAGGA+GGG | 0.514454 | 5.1:-67849581 | None:intergenic |
| CTTACATGTGTTAACTGAAT+GGG | 0.515810 | 5.1:-67847180 | None:intergenic |
| AAATACTGAAGAGCATAAAT+GGG | 0.516826 | 5.1:+67852465 | MS.gene81596:CDS |
| GAGATCAACTGCAGAAAGAT+GGG | 0.518004 | 5.1:-67852619 | None:intergenic |
| GTTGATATTTGGAACCAGGC+AGG | 0.518291 | 5.1:+67851470 | MS.gene81596:CDS |
| AGGTGCACTTGTGGGTTGCT+TGG | 0.522192 | 5.1:+67845949 | MS.gene81596:CDS |
| AGTGGAAGAGGAGTGAATGT+AGG | 0.522673 | 5.1:-67843932 | None:intergenic |
| GAAAGTTTCTGAAGAAGGAG+AGG | 0.523072 | 5.1:-67849218 | None:intergenic |
| CCTGATCCTGATATATACAT+TGG | 0.526026 | 5.1:+67850054 | MS.gene81596:CDS |
| TTCTGTTGATATTTGGAACC+AGG | 0.527505 | 5.1:+67851466 | MS.gene81596:CDS |
| AGAAGGAGAGGAATAACAAA+TGG | 0.529006 | 5.1:-67849206 | None:intergenic |
| GCTTACATGTGTTAACTGAA+TGG | 0.529424 | 5.1:-67847181 | None:intergenic |
| CACCATAAATACCTATTTGG+TGG | 0.533738 | 5.1:+67849480 | MS.gene81596:CDS |
| TTCTTTAGCAGCCAACCAGT+GGG | 0.538116 | 5.1:+67847453 | MS.gene81596:intron |
| GGGCATCAATTGCATCATCC+AGG | 0.542423 | 5.1:+67854557 | MS.gene81596:intron |
| AAAGTATCCCTTCATCCCTA+CGG | 0.543642 | 5.1:-67851964 | None:intergenic |
| AAGTATCCCTTCATCCCTAC+GGG | 0.545085 | 5.1:-67851963 | None:intergenic |
| TGAGAGCCCACAAACTGCAT+TGG | 0.545141 | 5.1:-67852320 | None:intergenic |
| TGGAAAGTCAATACCATCTG+TGG | 0.545953 | 5.1:-67849530 | None:intergenic |
| CAATTGTCTAATTAAGCTTG+TGG | 0.545962 | 5.1:+67853683 | MS.gene81596:CDS |
| GATCCTGATATATACATTGG+AGG | 0.546263 | 5.1:+67850057 | MS.gene81596:CDS |
| ATTGATGGCTCGGAAAATGC+TGG | 0.546735 | 5.1:+67849841 | MS.gene81596:CDS |
| GAAGTCTGACGAACTTACCT+TGG | 0.546814 | 5.1:+67852153 | MS.gene81596:CDS |
| CAGTAAAACTATACATAGCT+TGG | 0.548555 | 5.1:+67845652 | MS.gene81596:CDS |
| GAACCAGGCAGGAAATTGCA+TGG | 0.548786 | 5.1:+67851481 | MS.gene81596:CDS |
| GTACCATCAGAGTCCTAGAT+AGG | 0.551961 | 5.1:-67847499 | None:intergenic |
| GTGCAGCTATAGATGCAGAA+AGG | 0.556365 | 5.1:+67847034 | MS.gene81596:CDS |
| ACATCTCCCGTAGGGATGAA+GGG | 0.557429 | 5.1:+67851957 | MS.gene81596:CDS |
| CTCTGTATAGAACTACTAGC+AGG | 0.557547 | 5.1:+67849904 | MS.gene81596:CDS |
| ATTCTTACTGACGTATGTCT+CGG | 0.558169 | 5.1:+67852271 | MS.gene81596:CDS |
| AATCGGCATGATGTTCTAGC+AGG | 0.558531 | 5.1:-67846379 | None:intergenic |
| GATATTTGGCAATCTTTCTG+AGG | 0.560012 | 5.1:+67850944 | MS.gene81596:CDS |
| TAGAACCTGGAGAGTTGAAG+TGG | 0.560342 | 5.1:-67843950 | None:intergenic |
| GCACAATAAGCTGCTGAAGG+AGG | 0.560370 | 5.1:-67849582 | None:intergenic |
| GCCTCACAAAGTGTCAACCT+TGG | 0.561065 | 5.1:+67849871 | MS.gene81596:CDS |
| AAGCTTGCAAATAGACCAGA+TGG | 0.562090 | 5.1:-67847120 | None:intergenic |
| CAATGTATATATCAGGATCA+GGG | 0.563399 | 5.1:-67850053 | None:intergenic |
| AGTATGGTGAAATATGTCTC+AGG | 0.563485 | 5.1:-67849961 | None:intergenic |
| TGATATTGGCATGACTGGCA+TGG | 0.564848 | 5.1:+67850884 | MS.gene81596:CDS |
| AGCAGTACGAGGTGCACTTG+TGG | 0.566441 | 5.1:+67845940 | MS.gene81596:CDS |
| GATCTGATACTTCATCGTCC+AGG | 0.568050 | 5.1:+67852644 | MS.gene81596:CDS |
| TTCTTCGCTACATTCAGCAA+AGG | 0.569039 | 5.1:+67849241 | MS.gene81596:CDS |
| TGCTTCTAGAGTTAAAGCAT+TGG | 0.570514 | 5.1:-67844697 | None:intergenic |
| TTTCTTTAGCAGCCAACCAG+TGG | 0.574028 | 5.1:+67847452 | MS.gene81596:intron |
| ATATGTGATGGATCAAGTAA+TGG | 0.574191 | 5.1:+67852238 | MS.gene81596:CDS |
| ATAAGGAGGAAAAGTGATGT+GGG | 0.575456 | 5.1:+67845977 | MS.gene81596:CDS |
| TTTAGGAATGTATGACAGGA+AGG | 0.576270 | 5.1:+67846066 | MS.gene81596:CDS |
| TATAAGGAGGAAAAGTGATG+TGG | 0.578294 | 5.1:+67845976 | MS.gene81596:CDS |
| TACAGCTAAGACTGAACAGA+AGG | 0.579362 | 5.1:-67850013 | None:intergenic |
| TGAATATATTAGGTTCTACA+AGG | 0.580818 | 5.1:+67854361 | MS.gene81596:intron |
| TATTTGGAACGTGTGCTTTG+GGG | 0.585272 | 5.1:-67852018 | None:intergenic |
| TTTGCACAATAAGCTGCTGA+AGG | 0.596021 | 5.1:-67849585 | None:intergenic |
| TAGTAAAATACTTTGAAACA+CGG | 0.598571 | 5.1:-67849782 | None:intergenic |
| TTTATAATAACCCTCCTCAA+GGG | 0.602040 | 5.1:+67852061 | MS.gene81596:CDS |
| TCATTCAGTATAACAATCAG+TGG | 0.604482 | 5.1:-67852976 | None:intergenic |
| TTGCACACGAGCATCCCCAC+TGG | 0.604713 | 5.1:-67847468 | None:intergenic |
| TTTACTCTAGCACCCACAGA+TGG | 0.604886 | 5.1:+67849517 | MS.gene81596:CDS |
| AATATGAAGAGCGTCTTCCA+AGG | 0.605402 | 5.1:-67852170 | None:intergenic |
| ACACGAGCATCCCCACTGGT+TGG | 0.606403 | 5.1:-67847464 | None:intergenic |
| AAAATATGACATCTCCCGTA+GGG | 0.609695 | 5.1:+67851949 | MS.gene81596:CDS |
| CACACGTTCCAAATATAAGA+GGG | 0.611509 | 5.1:+67852026 | MS.gene81596:CDS |
| CTGGAACAACACCCTTGAGG+AGG | 0.612104 | 5.1:-67852072 | None:intergenic |
| GCAATGAAGCTGTCAAATGT+CGG | 0.615823 | 5.1:+67854422 | MS.gene81596:CDS |
| ATGTATATATCAGGATCAGG+GGG | 0.620026 | 5.1:-67850051 | None:intergenic |
| CCTTGAAAATGGAGGTGCAG+AGG | 0.624514 | 5.1:+67851427 | MS.gene81596:CDS |
| CCCATGTGCGTATCTATCCG+TGG | 0.624775 | 5.1:+67854149 | MS.gene81596:CDS |
| TGAACCTTCAATCAAAGGCA+AGG | 0.625366 | 5.1:-67852437 | None:intergenic |
| CCACGGATAGATACGCACAT+GGG | 0.626447 | 5.1:-67854149 | None:intergenic |
| GAAAATATGACATCTCCCGT+AGG | 0.626631 | 5.1:+67851948 | MS.gene81596:CDS |
| GGAATTAAATAAGAAATCTG+AGG | 0.626781 | 5.1:-67849992 | None:intergenic |
| GGAAAAGGTTTACTGTTGCG+TGG | 0.627473 | 5.1:+67852349 | MS.gene81596:CDS |
| TGACAAACCTGTGTTCTCCA+CGG | 0.628015 | 5.1:-67854166 | None:intergenic |
| TACAGAGATAAAGGAAACCA+AGG | 0.628293 | 5.1:-67849888 | None:intergenic |
| AGAACTACTAGCAGGATGCA+GGG | 0.628293 | 5.1:+67849912 | MS.gene81596:CDS |
| AATATGTTGCAGATATGTGA+TGG | 0.628938 | 5.1:+67852226 | MS.gene81596:CDS |
| TATCTATCCGTGGAGAACAC+AGG | 0.630733 | 5.1:+67854159 | MS.gene81596:CDS |
| ATCAAGAGAGAGAAGTTCCA+CGG | 0.632018 | 5.1:-67850820 | None:intergenic |
| ACCAAGGTTGACACTTTGTG+AGG | 0.632916 | 5.1:-67849872 | None:intergenic |
| GGAAAGTCAATACCATCTGT+GGG | 0.633762 | 5.1:-67849529 | None:intergenic |
| TGACCTATCTAGGACTCTGA+TGG | 0.637662 | 5.1:+67847496 | MS.gene81596:CDS |
| CTTATATAGAGGCCGTATCG+TGG | 0.637874 | 5.1:-67852572 | None:intergenic |
| TGGAACAACACCCTTGAGGA+GGG | 0.639744 | 5.1:-67852071 | None:intergenic |
| AATGTATATATCAGGATCAG+GGG | 0.641803 | 5.1:-67850052 | None:intergenic |
| TTTGGCAAGAAAATGTGCCA+CGG | 0.643030 | 5.1:+67852492 | MS.gene81596:CDS |
| AATACCGTAATTCGGTCAAG+AGG | 0.649510 | 5.1:+67844874 | MS.gene81596:CDS |
| GAGAATCGCAAAATATGTTG+GGG | 0.649741 | 5.1:+67849435 | MS.gene81596:CDS |
| GACAGACATGACATGTGCAA+AGG | 0.650988 | 5.1:-67852950 | None:intergenic |
| GGCAGGATCCTTGAAAATGG+AGG | 0.653631 | 5.1:+67851419 | MS.gene81596:intron |
| AAGAACATGAAAAGCTTCCG+TGG | 0.653843 | 5.1:-67852509 | None:intergenic |
| CACGGATAGATACGCACATG+GGG | 0.656585 | 5.1:-67854148 | None:intergenic |
| TGAAACACGGCATTGCAGGA+AGG | 0.657191 | 5.1:-67849769 | None:intergenic |
| TACGGCCTCTATATAAGCAG+AGG | 0.658188 | 5.1:+67852578 | MS.gene81596:CDS |
| TGTGGACTACTCTCATAAGA+CGG | 0.667969 | 5.1:+67853701 | MS.gene81596:CDS |
| CGAAGCAAGGACTACCAATG+AGG | 0.668037 | 5.1:-67846408 | None:intergenic |
| TCCACGGATAGATACGCACA+TGG | 0.668857 | 5.1:-67854150 | None:intergenic |
| CAACTGGAACAACACCCTTG+AGG | 0.676901 | 5.1:-67852075 | None:intergenic |
| TAGCTTGATGATTGATGACG+AGG | 0.676918 | 5.1:+67849624 | MS.gene81596:CDS |
| ATTCATGCAAGCTACTTCCG+TGG | 0.680489 | 5.1:+67851207 | MS.gene81596:CDS |
| GTTGCTTGGAACTTATAAGG+AGG | 0.693521 | 5.1:+67845963 | MS.gene81596:CDS |
| GATGTGACGAGTCAATTGAG+TGG | 0.694716 | 5.1:-67843905 | None:intergenic |
| TCTTTAGCAGCCAACCAGTG+GGG | 0.698072 | 5.1:+67847454 | MS.gene81596:intron |
| GCAGATTGGGAAGCAGTACG+AGG | 0.715218 | 5.1:+67845929 | MS.gene81596:CDS |
| TGTATATATCAGGATCAGGG+GGG | 0.766067 | 5.1:-67850050 | None:intergenic |
| ATTCATGTCAATCATCACAG+AGG | 0.767349 | 5.1:+67850674 | MS.gene81596:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 67843895 | 67854594 | 67843895 | ID=MS.gene81596 |
| chr5.1 | mRNA | 67843895 | 67854594 | 67843895 | ID=MS.gene81596.t1;Parent=MS.gene81596 |
| chr5.1 | exon | 67843895 | 67843966 | 67843895 | ID=MS.gene81596.t1.exon1;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67843895 | 67843966 | 67843895 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67844660 | 67844722 | 67844660 | ID=MS.gene81596.t1.exon2;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67844660 | 67844722 | 67844660 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67844841 | 67844895 | 67844841 | ID=MS.gene81596.t1.exon3;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67844841 | 67844895 | 67844841 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67845600 | 67845697 | 67845600 | ID=MS.gene81596.t1.exon4;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67845600 | 67845697 | 67845600 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67845929 | 67846087 | 67845929 | ID=MS.gene81596.t1.exon5;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67845929 | 67846087 | 67845929 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67846356 | 67846415 | 67846356 | ID=MS.gene81596.t1.exon6;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67846356 | 67846415 | 67846356 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67847009 | 67847197 | 67847009 | ID=MS.gene81596.t1.exon7;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67847009 | 67847197 | 67847009 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67847464 | 67847517 | 67847464 | ID=MS.gene81596.t1.exon8;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67847464 | 67847517 | 67847464 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67849176 | 67849262 | 67849176 | ID=MS.gene81596.t1.exon9;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67849176 | 67849262 | 67849176 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67849385 | 67850078 | 67849385 | ID=MS.gene81596.t1.exon10;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67849385 | 67850078 | 67849385 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67850592 | 67850965 | 67850592 | ID=MS.gene81596.t1.exon11;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67850592 | 67850965 | 67850592 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67851155 | 67851228 | 67851155 | ID=MS.gene81596.t1.exon12;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67851155 | 67851228 | 67851155 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67851424 | 67851529 | 67851424 | ID=MS.gene81596.t1.exon13;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67851424 | 67851529 | 67851424 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67851794 | 67852665 | 67851794 | ID=MS.gene81596.t1.exon14;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67851794 | 67852665 | 67851794 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67852933 | 67853008 | 67852933 | ID=MS.gene81596.t1.exon15;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67852933 | 67853008 | 67852933 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67853110 | 67853221 | 67853110 | ID=MS.gene81596.t1.exon16;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67853110 | 67853221 | 67853110 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67853646 | 67853722 | 67853646 | ID=MS.gene81596.t1.exon17;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67853646 | 67853722 | 67853646 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67854100 | 67854180 | 67854100 | ID=MS.gene81596.t1.exon18;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67854100 | 67854180 | 67854100 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67854373 | 67854452 | 67854373 | ID=MS.gene81596.t1.exon19;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67854373 | 67854452 | 67854373 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| chr5.1 | exon | 67854558 | 67854594 | 67854558 | ID=MS.gene81596.t1.exon20;Parent=MS.gene81596.t1 |
| chr5.1 | CDS | 67854558 | 67854594 | 67854558 | ID=cds.MS.gene81596.t1;Parent=MS.gene81596.t1 |
| Gene Sequence |
| Protein sequence |
