AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81723

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81723.t1 MTR_1g060520 82.203 354 32 1 1 354 1 323 0.0 592
MS.gene81723.t1 MTR_1g060500 82.173 359 59 2 1 354 1 359 0.0 572
MS.gene81723.t1 MTR_1g060490 75.989 354 79 3 1 354 1 348 0.0 538
MS.gene81723.t1 MTR_7g104220 61.392 316 115 6 40 352 42 353 9.21e-138 395
MS.gene81723.t1 MTR_1g092740 48.589 319 148 7 40 352 38 346 5.71e-99 297
MS.gene81723.t1 MTR_1g092690 42.773 339 179 6 20 353 31 359 3.55e-88 270
MS.gene81723.t1 MTR_1g092760 43.789 322 167 5 38 354 37 349 7.26e-86 263
MS.gene81723.t1 MTR_1g092750 42.769 325 169 7 35 352 35 349 1.81e-82 254
MS.gene81723.t1 MTR_1g060530 84.524 84 13 0 181 264 31 114 9.77e-45 150
MS.gene81723.t1 MTR_2g044100 31.464 321 177 12 41 334 44 348 6.31e-35 132
MS.gene81723.t1 MTR_8g031390 28.530 347 211 13 8 336 10 337 3.91e-32 124
MS.gene81723.t1 MTR_8g022810 26.404 356 228 13 9 344 14 355 4.93e-32 124
MS.gene81723.t1 MTR_8g022790 28.857 350 202 13 8 334 7 332 2.04e-30 119
MS.gene81723.t1 MTR_3g098270 30.000 320 186 13 41 335 35 341 2.04e-30 119
MS.gene81723.t1 MTR_8g031400 29.393 313 192 11 41 336 38 338 2.48e-30 119
MS.gene81723.t1 MTR_8g031390 29.114 316 190 12 8 305 10 309 5.16e-29 114
MS.gene81723.t1 MTR_3g005660 28.616 318 191 10 41 334 37 342 6.07e-29 115
MS.gene81723.t1 MTR_4g035353 27.557 352 212 15 15 340 11 345 1.87e-28 114
MS.gene81723.t1 MTR_5g009100 28.797 316 186 11 42 333 48 348 5.61e-27 110
MS.gene81723.t1 MTR_1g025760 27.005 374 239 15 1 353 42 402 2.29e-26 108
MS.gene81723.t1 MTR_8g031430 28.662 314 193 13 41 336 38 338 2.50e-26 108
MS.gene81723.t1 MTR_3g114090 27.746 346 217 15 28 353 26 358 5.09e-26 107
MS.gene81723.t1 MTR_1g092710 35.417 192 91 7 153 341 3 164 3.52e-25 100
MS.gene81723.t1 MTR_8g075230 27.528 356 226 13 5 340 2 345 4.52e-25 104
MS.gene81723.t1 MTR_5g084770 27.374 358 225 14 13 349 4 347 6.68e-25 103
MS.gene81723.t1 MTR_3g082830 28.916 332 209 13 41 354 39 361 8.80e-25 103
MS.gene81723.t1 MTR_3g052480 27.108 332 198 16 41 344 34 349 1.43e-24 103
MS.gene81723.t1 MTR_5g074270 29.305 331 195 16 41 345 34 351 1.84e-24 102
MS.gene81723.t1 MTR_3g024510 26.571 350 211 14 11 336 15 342 1.96e-24 102
MS.gene81723.t1 MTR_3g052580 25.077 323 214 13 41 344 29 342 4.64e-24 102
MS.gene81723.t1 MTR_5g084750 26.744 344 220 13 10 334 3 333 4.94e-24 101
MS.gene81723.t1 MTR_3g052580 25.478 314 206 13 41 335 28 332 5.56e-24 102
MS.gene81723.t1 MTR_1g079540 24.586 362 225 13 9 344 5 344 7.15e-24 101
MS.gene81723.t1 MTR_8g031420 26.271 354 225 13 1 336 1 336 7.29e-24 101
MS.gene81723.t1 MTR_2g017965 29.154 319 186 16 41 338 34 333 9.62e-24 101
MS.gene81723.t1 MTR_0009s0250 27.246 345 218 14 11 341 6 331 2.08e-23 99.8
MS.gene81723.t1 MTR_5g084790 27.632 380 222 15 1 353 1 354 2.52e-23 99.8
MS.gene81723.t1 MTR_1g025720 27.322 366 227 16 9 354 9 355 4.25e-23 99.0
MS.gene81723.t1 MTR_3g052490 25.378 331 204 18 41 344 33 347 5.06e-23 99.0
MS.gene81723.t1 MTR_7g116520 27.044 318 197 13 39 334 33 337 5.16e-23 99.0
MS.gene81723.t1 MTR_1g079530 26.536 358 217 16 11 348 9 340 7.27e-23 98.6
MS.gene81723.t1 MTR_3g005650 26.163 344 206 14 13 335 13 329 1.58e-22 97.4
MS.gene81723.t1 MTR_1g025680 26.667 360 229 16 15 353 11 356 2.67e-22 97.8
MS.gene81723.t1 MTR_4g122200 29.664 327 192 17 42 344 37 349 6.66e-22 95.9
MS.gene81723.t1 MTR_7g116870 26.946 334 194 13 39 336 32 351 6.93e-22 95.9
MS.gene81723.t1 MTR_0565s0010 26.875 320 193 14 42 336 34 337 7.61e-22 95.5
MS.gene81723.t1 MTR_1g069175 26.050 357 228 14 9 344 7 348 9.13e-22 95.5
MS.gene81723.t1 MTR_2g015580 25.758 330 210 12 39 340 46 368 1.88e-21 94.7
MS.gene81723.t1 MTR_2g033930 27.358 318 195 13 41 336 33 336 2.26e-21 94.4
MS.gene81723.t1 MTR_2g033920 28.931 318 190 14 42 336 37 341 3.10e-21 94.0
MS.gene81723.t1 MTR_8g022810 30.000 230 135 9 9 222 14 233 4.23e-21 92.8
MS.gene81723.t1 MTR_1g025700 25.344 363 238 14 9 352 22 370 5.51e-21 93.2
MS.gene81723.t1 MTR_2g084585 26.852 324 206 12 41 344 31 343 6.64e-21 92.8
MS.gene81723.t1 MTR_8g079050 25.157 318 206 13 42 335 39 348 6.89e-21 92.8
MS.gene81723.t1 MTR_2g015080 25.956 366 219 17 6 341 14 357 1.24e-20 92.0
MS.gene81723.t1 MTR_7g116500 25.140 358 220 15 1 333 1 335 2.05e-20 91.7
MS.gene81723.t1 MTR_3g021460 26.923 312 191 12 41 335 32 323 3.23e-20 90.9
MS.gene81723.t1 MTR_5g022630 27.011 348 219 14 13 338 18 352 4.89e-20 90.5
MS.gene81723.t1 MTR_4g104240 26.099 364 225 14 7 342 10 357 1.41e-19 89.4
MS.gene81723.t1 MTR_7g116510 24.251 334 215 13 39 348 24 343 1.41e-19 89.0
MS.gene81723.t1 MTR_6g021530 23.944 355 228 14 13 344 8 343 1.58e-19 89.0
MS.gene81723.t1 MTR_5g083040 24.316 329 215 9 38 342 30 348 2.22e-19 88.6
MS.gene81723.t1 MTR_5g078210 25.077 323 206 13 42 343 27 334 2.80e-19 88.2
MS.gene81723.t1 MTR_4g108690 25.228 329 209 12 42 347 29 343 2.93e-19 88.2
MS.gene81723.t1 MTR_1g025910 27.044 318 203 11 45 344 41 347 3.26e-19 88.2
MS.gene81723.t1 MTR_2g461580 25.697 323 198 14 41 344 32 331 5.03e-19 87.4
MS.gene81723.t1 MTR_2g017955 27.273 319 195 12 41 340 34 334 6.90e-19 87.4
MS.gene81723.t1 MTR_7g008060 25.745 369 204 16 9 348 10 337 8.70e-19 86.7
MS.gene81723.t1 MTR_4g056160 26.984 315 202 12 41 335 28 334 9.30e-19 86.7
MS.gene81723.t1 MTR_4g019880 25.138 362 218 15 1 334 1 337 1.29e-18 86.3
MS.gene81723.t1 MTR_3g435540 24.924 329 210 13 42 347 25 339 1.79e-18 85.9
MS.gene81723.t1 MTR_1g024890 23.582 335 213 12 36 344 28 345 1.80e-18 85.9
MS.gene81723.t1 MTR_8g075220 26.590 346 214 14 35 353 35 367 2.02e-18 85.9
MS.gene81723.t1 MTR_5g022640 25.797 345 226 13 13 338 18 351 2.75e-18 85.5
MS.gene81723.t1 MTR_3g069780 27.616 344 196 19 37 344 27 353 3.24e-18 85.1
MS.gene81723.t1 MTR_3g464730 26.593 361 227 16 16 353 6 351 5.43e-18 84.3
MS.gene81723.t1 MTR_2g015670 25.959 339 198 13 36 344 27 342 8.77e-18 84.0
MS.gene81723.t1 MTR_8g087890 24.923 325 192 14 42 336 33 335 1.05e-17 83.6
MS.gene81723.t1 MTR_2g015630 24.471 331 215 11 45 346 36 360 1.13e-17 84.0
MS.gene81723.t1 MTR_4g087985 24.269 342 220 14 26 341 25 353 2.62e-17 82.4
MS.gene81723.t1 MTR_8g087870 27.459 244 140 10 41 258 30 262 2.75e-17 82.4
MS.gene81723.t1 MTR_8g074560 26.724 348 215 17 13 334 6 339 4.77e-17 81.6
MS.gene81723.t1 MTR_7g116570 26.296 270 172 10 8 258 7 268 5.28e-17 81.6
MS.gene81723.t1 MTR_2g017925 26.433 314 191 12 41 335 34 326 9.18e-17 80.9
MS.gene81723.t1 MTR_8g074570 23.077 351 224 12 7 334 16 343 1.06e-16 80.9
MS.gene81723.t1 MTR_3g448360 25.215 349 209 15 37 349 26 358 1.24e-16 80.5
MS.gene81723.t1 MTR_4g056280 25.392 319 199 10 41 335 31 334 2.16e-16 79.7
MS.gene81723.t1 MTR_2g015590 24.848 330 202 12 41 336 32 349 3.23e-16 79.3
MS.gene81723.t1 MTR_7g087190 22.865 363 224 14 28 349 33 380 4.30e-16 79.3
MS.gene81723.t1 MTR_7g033150 23.514 370 237 13 13 344 7 368 4.81e-16 79.0
MS.gene81723.t1 MTR_3g023220 26.875 320 180 16 41 335 34 324 7.30e-16 78.2
MS.gene81723.t1 MTR_5g078210 27.426 237 145 9 42 257 27 257 7.45e-16 77.8
MS.gene81723.t1 MTR_5g093090 24.528 318 207 13 41 336 29 335 1.29e-15 77.4
MS.gene81723.t1 MTR_2g015590 27.572 243 144 8 41 255 32 270 3.00e-15 76.3
MS.gene81723.t1 MTR_1g030268 23.256 387 243 14 1 349 1 371 3.40e-15 76.6
MS.gene81723.t1 MTR_2g015650 25.272 368 225 14 13 344 3 356 3.61e-15 76.3
MS.gene81723.t1 MTR_1g030275 22.933 375 228 12 9 344 13 365 4.19e-15 76.3
MS.gene81723.t1 MTR_3g114120 26.006 323 205 14 41 344 48 355 8.42e-15 75.1
MS.gene81723.t1 MTR_2g043980 25.926 297 183 11 28 296 24 311 8.89e-15 75.1
MS.gene81723.t1 MTR_8g089805 22.280 386 237 15 2 344 6 371 1.30e-14 74.7
MS.gene81723.t1 MTR_2g100620 25.392 319 202 13 41 336 32 337 4.50e-14 72.8
MS.gene81723.t1 MTR_3g069520 25.723 346 208 16 37 349 27 356 5.14e-14 72.8
MS.gene81723.t1 MTR_1g030230 21.067 375 240 12 13 349 9 365 1.06e-13 72.0
MS.gene81723.t1 MTR_3g463960 22.941 340 212 13 37 340 41 366 1.63e-13 71.2
MS.gene81723.t1 MTR_3g463950 22.941 340 212 13 37 340 41 366 1.63e-13 71.2
MS.gene81723.t1 MTR_3g463970 22.941 340 212 13 37 340 41 366 1.63e-13 71.2
MS.gene81723.t1 MTR_3g463940 22.941 340 212 13 37 340 41 366 1.63e-13 71.2
MS.gene81723.t1 MTR_2g017915 23.676 321 178 12 41 337 34 311 2.21e-13 70.9
MS.gene81723.t1 MTR_7g111780 23.810 315 210 8 41 336 37 340 2.91e-13 70.5
MS.gene81723.t1 MTR_7g033155 22.597 385 239 13 10 344 7 382 4.41e-13 70.1
MS.gene81723.t1 MTR_2g017875 25.145 346 206 16 41 352 35 361 1.31e-12 68.6
MS.gene81723.t1 MTR_1g030268 23.975 317 193 11 1 284 1 302 7.81e-12 65.9
MS.gene81723.t1 MTR_7g113860 24.281 313 185 12 33 308 24 321 9.93e-12 65.9
MS.gene81723.t1 MTR_5g093090 24.528 265 179 10 41 286 29 291 3.21e-11 63.9
MS.gene81723.t1 MTR_1g082390 25.472 318 176 13 9 294 13 301 9.29e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81723.t1 AT5G03610 51.695 354 159 7 1 346 1 350 3.33e-118 346
MS.gene81723.t1 AT3G09930 49.201 313 149 6 40 346 39 347 1.46e-103 309
MS.gene81723.t1 AT3G09930 49.201 313 149 6 40 346 39 347 1.46e-103 309
MS.gene81723.t1 AT5G03600 39.474 342 181 10 11 344 23 346 1.87e-74 234
MS.gene81723.t1 AT5G03600 40.248 323 172 9 30 344 2 311 3.88e-73 230
MS.gene81723.t1 AT2G36325 38.658 313 175 10 40 344 47 350 1.67e-65 211
MS.gene81723.t1 AT5G03590 34.564 298 144 8 55 346 1 253 6.65e-54 178
MS.gene81723.t1 AT5G03590 29.530 298 128 8 55 346 1 222 2.66e-39 139
MS.gene81723.t1 AT5G03590 40.722 194 105 6 9 199 7 193 6.23e-39 137
MS.gene81723.t1 AT1G53920 28.125 352 226 12 8 342 18 359 3.19e-33 127
MS.gene81723.t1 AT1G58430 29.518 332 195 13 41 347 36 353 5.86e-30 118
MS.gene81723.t1 AT2G40250 27.829 327 203 10 37 340 33 349 6.52e-30 117
MS.gene81723.t1 AT5G41890 29.283 321 196 11 42 336 33 348 1.02e-29 117
MS.gene81723.t1 AT5G08460 27.500 360 219 15 1 335 15 357 1.83e-29 117
MS.gene81723.t1 AT5G40990 30.218 321 183 14 41 334 38 344 2.57e-29 116
MS.gene81723.t1 AT2G31540 27.679 336 208 11 35 345 26 351 1.20e-28 114
MS.gene81723.t1 AT1G20130 29.464 336 201 13 41 350 205 530 1.22e-28 116
MS.gene81723.t1 AT1G20130 29.464 336 201 13 41 350 185 510 1.28e-28 116
MS.gene81723.t1 AT1G20120 29.063 320 190 15 41 337 79 384 5.60e-28 113
MS.gene81723.t1 AT1G54020 28.818 347 203 16 7 339 9 325 1.41e-27 111
MS.gene81723.t1 AT2G30310 27.134 328 208 11 41 347 35 352 5.51e-27 109
MS.gene81723.t1 AT2G04570 28.571 336 203 14 41 353 29 350 4.94e-26 107
MS.gene81723.t1 AT1G33811 27.684 354 212 16 8 334 6 342 5.70e-26 107
MS.gene81723.t1 AT3G14225 30.503 318 186 14 41 334 38 344 6.82e-26 107
MS.gene81723.t1 AT1G71691 28.660 321 180 14 41 334 56 354 1.57e-25 106
MS.gene81723.t1 AT1G28640 27.350 351 217 12 14 335 11 352 2.53e-25 105
MS.gene81723.t1 AT4G10950 28.349 321 187 14 41 335 72 375 3.63e-25 105
MS.gene81723.t1 AT1G59406 26.171 363 229 13 10 352 5 348 3.81e-25 104
MS.gene81723.t1 AT1G59030 26.171 363 229 13 10 352 5 348 3.81e-25 104
MS.gene81723.t1 AT1G58725 26.171 363 229 13 10 352 5 348 3.81e-25 104
MS.gene81723.t1 AT1G75890 29.483 329 190 13 35 337 42 354 4.15e-25 104
MS.gene81723.t1 AT2G24560 26.524 328 210 12 41 347 35 352 5.06e-25 104
MS.gene81723.t1 AT1G75890 29.483 329 190 13 35 337 71 383 5.31e-25 105
MS.gene81723.t1 AT3G14225 29.846 325 183 15 41 334 38 348 9.75e-25 103
MS.gene81723.t1 AT5G18430 27.187 320 196 12 39 334 27 333 1.37e-24 103
MS.gene81723.t1 AT1G54000 26.822 343 220 13 1 331 2 325 1.40e-24 103
MS.gene81723.t1 AT1G71250 27.586 319 192 13 40 334 41 344 2.26e-24 102
MS.gene81723.t1 AT3G14820 26.946 334 217 11 30 347 22 344 6.16e-24 101
MS.gene81723.t1 AT5G42170 25.857 321 210 10 41 344 51 360 1.15e-23 100
MS.gene81723.t1 AT1G20132 26.036 338 219 13 35 352 56 382 1.35e-23 100
MS.gene81723.t1 AT1G75880 27.945 365 233 13 6 351 19 372 1.39e-23 100
MS.gene81723.t1 AT1G20135 28.571 280 178 10 41 303 30 304 3.22e-23 99.0
MS.gene81723.t1 AT1G75900 25.904 332 216 11 41 353 44 364 4.29e-23 99.0
MS.gene81723.t1 AT4G10950 27.301 326 180 14 41 335 72 371 4.38e-23 99.8
MS.gene81723.t1 AT2G30220 25.836 329 211 11 41 347 34 351 5.86e-23 98.6
MS.gene81723.t1 AT1G75880 27.869 366 233 13 6 351 19 373 6.11e-23 99.0
MS.gene81723.t1 AT1G54010 27.011 348 219 14 1 334 2 328 6.82e-23 99.0
MS.gene81723.t1 AT1G28650 25.485 361 227 12 11 340 10 359 8.28e-23 98.6
MS.gene81723.t1 AT1G75890 28.070 342 191 13 35 337 42 367 9.00e-23 98.6
MS.gene81723.t1 AT5G33370 28.216 241 151 8 38 259 28 265 1.33e-22 97.4
MS.gene81723.t1 AT1G54030 27.331 311 186 12 38 334 50 334 1.67e-22 98.2
MS.gene81723.t1 AT5G33370 24.324 333 209 12 38 344 28 343 1.79e-22 97.4
MS.gene81723.t1 AT2G03980 26.349 315 197 14 41 334 44 344 2.38e-22 97.1
MS.gene81723.t1 AT2G03980 26.349 315 197 14 41 334 44 344 2.38e-22 97.1
MS.gene81723.t1 AT2G03980 26.349 315 197 14 41 334 44 344 2.38e-22 97.1
MS.gene81723.t1 AT2G03980 26.349 315 197 14 41 334 44 344 2.38e-22 97.1
MS.gene81723.t1 AT1G75930 26.627 338 193 13 41 352 30 338 2.61e-22 96.7
MS.gene81723.t1 AT3G50400 26.087 322 201 12 42 336 36 347 3.72e-22 96.7
MS.gene81723.t1 AT1G58520 26.254 339 209 13 34 352 24 341 3.90e-22 96.3
MS.gene81723.t1 AT1G58525 26.254 339 209 13 34 352 24 341 3.90e-22 96.3
MS.gene81723.t1 AT1G29660 26.158 367 226 17 12 352 9 356 5.88e-22 95.9
MS.gene81723.t1 AT1G53940 25.140 358 232 13 1 334 1 346 7.38e-22 95.9
MS.gene81723.t1 AT5G15720 26.708 322 197 14 38 334 28 335 8.04e-22 95.5
MS.gene81723.t1 AT5G22810 28.012 332 179 13 41 336 35 342 1.27e-21 94.7
MS.gene81723.t1 AT3G14210 25.641 312 204 13 37 334 33 330 1.67e-21 95.1
MS.gene81723.t1 AT2G27360 25.926 324 196 11 39 324 32 349 1.91e-21 94.7
MS.gene81723.t1 AT2G19060 27.244 312 200 12 42 340 32 329 2.99e-21 93.6
MS.gene81723.t1 AT1G06990 24.545 330 219 10 41 350 38 357 3.52e-21 93.6
MS.gene81723.t1 AT2G23540 26.158 367 199 16 15 335 19 359 5.23e-21 93.6
MS.gene81723.t1 AT1G71691 28.889 270 153 11 40 284 55 310 5.51e-21 92.4
MS.gene81723.t1 AT5G45960 26.727 333 211 12 36 345 43 365 7.08e-21 93.2
MS.gene81723.t1 AT3G53100 25.714 315 205 12 40 335 29 333 8.11e-21 92.4
MS.gene81723.t1 AT1G28670 25.833 360 222 13 14 340 11 358 1.04e-20 92.8
MS.gene81723.t1 AT3G48460 26.810 373 223 16 1 340 1 356 3.15e-20 91.3
MS.gene81723.t1 AT1G54030 29.362 235 135 9 38 258 50 267 6.33e-20 89.4
MS.gene81723.t1 AT5G15720 28.148 270 165 12 38 284 28 291 7.18e-20 89.4
MS.gene81723.t1 AT4G01130 26.377 345 187 13 13 322 14 326 9.23e-20 89.7
MS.gene81723.t1 AT4G28780 25.074 339 215 13 36 350 27 350 1.03e-19 89.7
MS.gene81723.t1 AT1G71120 24.096 332 224 11 41 352 32 355 1.63e-19 89.0
MS.gene81723.t1 AT1G28590 25.072 347 204 13 39 346 35 364 1.72e-19 89.4
MS.gene81723.t1 AT1G75920 26.136 352 214 14 15 344 7 334 1.88e-19 88.6
MS.gene81723.t1 AT5G45950 25.344 363 236 13 8 352 6 351 2.17e-19 88.6
MS.gene81723.t1 AT5G45670 25.078 319 198 12 42 335 31 333 2.90e-19 88.2
MS.gene81723.t1 AT1G73610 25.836 329 194 12 35 340 30 331 3.06e-19 87.8
MS.gene81723.t1 AT3G14220 26.748 329 185 14 41 342 33 332 3.52e-19 87.8
MS.gene81723.t1 AT2G19010 27.097 310 193 13 41 335 31 322 1.42e-18 85.9
MS.gene81723.t1 AT1G28570 24.096 332 214 12 36 337 30 353 2.00e-18 85.9
MS.gene81723.t1 AT2G19010 26.774 310 194 12 41 335 61 352 2.23e-18 85.9
MS.gene81723.t1 AT1G29670 26.087 345 215 17 12 335 9 334 4.70e-18 84.7
MS.gene81723.t1 AT1G29670 25.641 351 214 16 7 336 79 403 5.83e-18 85.1
MS.gene81723.t1 AT1G74460 24.771 327 213 12 42 347 25 339 7.26e-18 84.3
MS.gene81723.t1 AT3G43550 27.304 293 183 12 10 284 5 285 1.69e-17 82.0
MS.gene81723.t1 AT2G19050 25.974 308 199 11 42 336 33 324 1.79e-17 82.8
MS.gene81723.t1 AT1G28610 23.988 346 208 13 39 346 30 358 2.01e-17 83.2
MS.gene81723.t1 AT2G42990 25.872 344 210 15 13 334 11 331 2.18e-17 82.8
MS.gene81723.t1 AT1G28600 24.332 337 206 12 39 340 30 352 2.84e-17 82.8
MS.gene81723.t1 AT5G37690 22.364 313 214 11 42 336 29 330 3.84e-17 82.0
MS.gene81723.t1 AT1G28580 24.458 323 201 12 39 324 36 352 5.59e-17 81.6
MS.gene81723.t1 AT5G45910 27.378 347 197 15 39 344 29 361 5.82e-17 81.6
MS.gene81723.t1 AT2G19050 28.395 243 155 9 42 271 33 269 1.03e-16 79.7
MS.gene81723.t1 AT5G03810 26.184 359 217 16 11 344 9 344 1.03e-16 80.9
MS.gene81723.t1 AT4G18970 24.214 318 202 13 42 335 30 332 1.19e-16 80.9
MS.gene81723.t1 AT4G18970 24.214 318 202 13 42 335 30 332 1.34e-16 80.5
MS.gene81723.t1 AT1G75910 24.722 360 213 14 13 344 5 334 2.67e-16 79.3
MS.gene81723.t1 AT1G53990 26.480 321 188 12 41 334 36 335 2.68e-16 79.7
MS.gene81723.t1 AT4G26790 25.595 336 211 15 41 352 30 350 4.00e-16 79.0
MS.gene81723.t1 AT4G26790 25.595 336 211 15 41 352 30 350 4.00e-16 79.0
MS.gene81723.t1 AT1G28660 25.208 361 222 14 14 340 11 357 4.94e-16 79.0
MS.gene81723.t1 AT4G01130 27.036 307 166 13 13 284 14 297 6.75e-16 78.2
MS.gene81723.t1 AT5G55050 24.908 273 186 11 41 294 40 312 7.07e-16 78.6
MS.gene81723.t1 AT1G75920 25.068 367 214 15 15 344 2 344 7.09e-16 78.2
MS.gene81723.t1 AT1G56670 23.611 360 227 10 7 340 13 350 2.38e-15 77.0
MS.gene81723.t1 AT1G31550 24.784 347 204 12 39 346 35 363 2.67e-15 77.0
MS.gene81723.t1 AT5G03820 26.667 330 201 15 41 344 62 376 5.08e-15 75.9
MS.gene81723.t1 AT5G03820 26.667 330 201 15 41 344 34 348 5.13e-15 75.9
MS.gene81723.t1 AT4G30140 25.081 307 197 9 42 334 35 322 7.85e-15 75.1
MS.gene81723.t1 AT1G23500 24.460 278 192 7 41 303 36 310 1.09e-14 74.7
MS.gene81723.t1 AT4G16230 29.703 202 115 8 42 222 32 227 1.21e-14 73.2
MS.gene81723.t1 AT5G63170 24.286 280 190 9 41 303 29 303 1.24e-14 74.3
MS.gene81723.t1 AT1G28660 25.485 361 220 15 14 340 11 356 1.65e-14 74.3
MS.gene81723.t1 AT1G31550 25.072 347 200 14 39 346 35 360 8.90e-14 72.4
MS.gene81723.t1 AT5G14450 23.433 367 220 13 8 336 19 362 9.41e-14 72.0
MS.gene81723.t1 AT1G75920 24.161 298 189 10 65 344 28 306 1.66e-13 70.9
MS.gene81723.t1 AT1G09390 23.625 309 198 7 8 294 11 303 2.93e-13 70.5
MS.gene81723.t1 AT1G56670 24.390 246 161 4 41 267 41 280 4.26e-13 69.3
MS.gene81723.t1 AT3G26430 25.321 312 181 13 18 294 11 305 5.09e-13 70.1
MS.gene81723.t1 AT5G37690 21.725 313 208 11 42 336 29 322 1.68e-12 68.2
MS.gene81723.t1 AT1G67830 21.408 341 221 9 41 344 31 361 3.10e-12 67.4
MS.gene81723.t1 AT1G71691 25.275 273 157 13 87 334 3 253 3.46e-12 66.6
MS.gene81723.t1 AT3G62280 23.926 326 197 12 41 336 37 341 4.03e-12 67.0
MS.gene81723.t1 AT2G04020 26.341 205 127 8 41 228 44 241 5.73e-12 66.2
MS.gene81723.t1 AT1G54790 24.390 369 211 13 13 336 8 353 8.15e-12 66.2
MS.gene81723.t1 AT3G62280 28.079 203 116 7 41 226 37 226 3.75e-11 63.5

Find 78 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTTGAGTTGTCATATT+TGG 0.146360 1.3:-43874764 None:intergenic
ACATACTTCTAATAAATATT+TGG 0.172791 1.3:+43876045 MS.gene81723:CDS
TATTGAATCAACTTTCTTTC+GGG 0.192462 1.3:+43876078 MS.gene81723:CDS
ATATTGTGCAGCCAAGTATT+TGG 0.194450 1.3:+43874619 MS.gene81723:intron
CACCAATCATTCACAAATTA+TGG 0.229723 1.3:+43874651 MS.gene81723:CDS
TGGTGTGTTCCTTTGTTTCT+TGG 0.252575 1.3:-43875886 None:intergenic
CCCGAACAGGATTTGAAGTA+TGG 0.259601 1.3:+43874689 MS.gene81723:CDS
ATTGCTTATGTCTCTGTTGC+TGG 0.296373 1.3:+43874845 MS.gene81723:CDS
ATATTGAATCAACTTTCTTT+CGG 0.307819 1.3:+43876077 MS.gene81723:CDS
TCAAACGTTCCTTAATGTTA+TGG 0.312425 1.3:-43875967 None:intergenic
GGCCACAGATGGCTCTCTTT+TGG 0.331910 1.3:+43874889 MS.gene81723:CDS
CCCTTCTAGCCATAACATTA+AGG 0.338472 1.3:+43875958 MS.gene81723:CDS
TCCTTAATGTTATGGCTAGA+AGG 0.339670 1.3:-43875959 None:intergenic
CGGGGAAAGGTTATGCCATA+TGG 0.339906 1.3:-43874404 None:intergenic
TATTGTGCAGCCAAGTATTT+GGG 0.361299 1.3:+43874620 MS.gene81723:intron
CATCATTGTTATAGGACAAA+TGG 0.364687 1.3:+43874262 MS.gene81723:intron
TACCATAATTTGTGAATGAT+TGG 0.383106 1.3:-43874653 None:intergenic
CTGAGAGAAGTACAAGTACT+AGG 0.387963 1.3:-43874007 None:intergenic
ATCACTGATTCAATGAAAGA+TGG 0.393616 1.3:-43875671 None:intergenic
TTGATTCATCTTCAAAGCTT+AGG 0.395738 1.3:+43875713 MS.gene81723:CDS
ATCATTGTTATAGGACAAAT+GGG 0.398546 1.3:+43874263 MS.gene81723:intron
CCCATACTTCAAATCCTGTT+CGG 0.407942 1.3:-43874690 None:intergenic
ACTCTCCATGAATCGGATAT+AGG 0.408827 1.3:-43874380 None:intergenic
TAAAACCTATATCCGATTCA+TGG 0.411457 1.3:+43874375 MS.gene81723:CDS
CTAGTACTTGTACTTCTCTC+AGG 0.415375 1.3:+43874008 MS.gene81723:CDS
CCATACTTCAAATCCTGTTC+GGG 0.419024 1.3:-43874689 None:intergenic
GCTTTGAAGATGAATCAAAT+TGG 0.421198 1.3:-43875708 None:intergenic
TGATTTCAATCCCAAATACT+TGG 0.428800 1.3:-43874630 None:intergenic
GGAGATTCGTATGTCGATAC+TGG 0.436729 1.3:+43874344 MS.gene81723:CDS
AGAGACATAAGCAATAGAAT+TGG 0.452863 1.3:-43874837 None:intergenic
GTGGGTGATTTACAACCTCT+TGG 0.468023 1.3:+43875752 MS.gene81723:CDS
GGTTCAACTTCGTAACAGAT+TGG 0.473218 1.3:-43875865 None:intergenic
CATAACCTTTCCCCGAAAAC+CGG 0.475420 1.3:+43874412 MS.gene81723:CDS
ACCTTTCCCCGAAAACCGGC+TGG 0.475929 1.3:+43874416 MS.gene81723:CDS
CATTCCAACCTGCTTGTGTT+GGG 0.480341 1.3:-43876111 None:intergenic
TCTAGTATAAAATTTGATGA+AGG 0.484566 1.3:-43876162 None:intergenic
TAATAACATAGTGCCCGAAC+AGG 0.492960 1.3:+43874676 MS.gene81723:CDS
ACTATTGCAACTTTGAAATG+AGG 0.493039 1.3:-43875801 None:intergenic
ATATGGGACTCTCCATGAAT+CGG 0.493108 1.3:-43874387 None:intergenic
AGGATTTAAGAGAATTGTTG+TGG 0.493326 1.3:+43875733 MS.gene81723:CDS
AACTTTGCATATGGTGGTAC+AGG 0.496157 1.3:+43874716 MS.gene81723:CDS
AAATGACTACAATCATTACT+TGG 0.497754 1.3:+43874868 MS.gene81723:CDS
CGTTTGAAGCCATGCTGCAT+CGG 0.506118 1.3:+43875983 MS.gene81723:CDS
GGGGAAAGGTTATGCCATAT+GGG 0.515080 1.3:-43874403 None:intergenic
CCTTAATGTTATGGCTAGAA+GGG 0.516210 1.3:-43875958 None:intergenic
GCATTCCAACCTGCTTGTGT+TGG 0.516376 1.3:-43876112 None:intergenic
ATTGGTTCAATAAGTTGTTG+TGG 0.522482 1.3:-43875847 None:intergenic
GATTCATGGAGAGTCCCATA+TGG 0.531813 1.3:+43874389 MS.gene81723:CDS
GGATTTAAGAGAATTGTTGT+GGG 0.540936 1.3:+43875734 MS.gene81723:CDS
CACACCACATTCACAATCCT+AGG 0.549324 1.3:+43875902 MS.gene81723:CDS
TCACTGATTCAATGAAAGAT+GGG 0.549620 1.3:-43875670 None:intergenic
TTGAAGATGAATCAAATTGG+TGG 0.551393 1.3:-43875705 None:intergenic
GAATGCTGTGTATAATGAGT+TGG 0.561108 1.3:+43876129 MS.gene81723:CDS
CAGTTACACCCAACACAAGC+AGG 0.562042 1.3:+43876103 MS.gene81723:CDS
TGAAACTATCGAAAATGCCT+AGG 0.565738 1.3:-43875919 None:intergenic
TGAGAGAAGTACAAGTACTA+GGG 0.566574 1.3:-43874006 None:intergenic
TATGGGATGAACTTTGCATA+TGG 0.569763 1.3:+43874707 MS.gene81723:CDS
AATCATTACTTGGCCACAGA+TGG 0.570532 1.3:+43874878 MS.gene81723:CDS
TTGAAATGAGGTTTCAGCAG+TGG 0.574553 1.3:-43875789 None:intergenic
CCGAACAGGATTTGAAGTAT+GGG 0.582491 1.3:+43874690 MS.gene81723:CDS
CCGTCGGAGAATCTTCCAGC+CGG 0.596317 1.3:-43874431 None:intergenic
TACACCCAACACAAGCAGGT+TGG 0.603846 1.3:+43876107 MS.gene81723:CDS
GTCAGTTAAAACTCTGCCGT+CGG 0.606044 1.3:-43874447 None:intergenic
CAAGTACTAGGGAAAGACAT+AGG 0.608076 1.3:-43873995 None:intergenic
AGTTGTTGTGGAGAGCTACA+AGG 0.617684 1.3:-43875835 None:intergenic
GAGGTTTCAGCAGTGGCTTG+AGG 0.618863 1.3:-43875782 None:intergenic
GTAAGCGATGAGTATACTTG+TGG 0.628921 1.3:+43876007 MS.gene81723:CDS
ACAAATGGGGATGCAAGTTG+AGG 0.632097 1.3:+43874277 MS.gene81723:CDS
GAAGTTGAACCAAGAAACAA+AGG 0.632242 1.3:+43875877 MS.gene81723:CDS
TCGCTTACACCGATGCAGCA+TGG 0.641261 1.3:-43875992 None:intergenic
AATGCCTAGGATTGTGAATG+TGG 0.644042 1.3:-43875906 None:intergenic
GGGATGAACTTTGCATATGG+TGG 0.671490 1.3:+43874710 MS.gene81723:CDS
TACCAAAAGAGAGCCATCTG+TGG 0.683874 1.3:-43874891 None:intergenic
GTACTAGGGAAAGACATAGG+AGG 0.694994 1.3:-43873992 None:intergenic
CCGGCTGGAAGATTCTCCGA+CGG 0.697984 1.3:+43874431 MS.gene81723:CDS
GCTTGAGGAACACAACCAAG+AGG 0.727077 1.3:-43875767 None:intergenic
AGGATGATTGAGATGGCGAG+TGG 0.741996 1.3:-43874300 None:intergenic
TCATTGTTATAGGACAAATG+GGG 0.761818 1.3:+43874264 MS.gene81723:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGAATTTAATTTAAATCTT+AGG + chr1.3:43874042-43874061 MS.gene81723:intron 10.0%
!!! TGAATTTAATTTAAATCTTA+GGG + chr1.3:43874043-43874062 MS.gene81723:intron 10.0%
!! ACATACTTCTAATAAATATT+TGG + chr1.3:43876045-43876064 MS.gene81723:CDS 15.0%
!! TCAAAAAAATTGTTTGTATT+CGG + chr1.3:43874323-43874342 MS.gene81723:CDS 15.0%
!!! AATACAAACAATTTTTTTGA+AGG - chr1.3:43874323-43874342 None:intergenic 15.0%
!!! ATTTTTTTTTTTGATAAGCA+AGG - chr1.3:43875221-43875240 None:intergenic 15.0%
!!! TTTTTTTTAACTTGAGTAAT+TGG + chr1.3:43874574-43874593 MS.gene81723:intron 15.0%
!! AATATTTCGCATTATTAGTA+TGG - chr1.3:43874134-43874153 None:intergenic 20.0%
!! ATATTGAATCAACTTTCTTT+CGG + chr1.3:43876077-43876096 MS.gene81723:CDS 20.0%
!!! AGACTCATATAAATTTTTTG+AGG + chr1.3:43875115-43875134 MS.gene81723:intron 20.0%
!!! GACTCATATAAATTTTTTGA+GGG + chr1.3:43875116-43875135 MS.gene81723:intron 20.0%
!!! TCTGTAGCATTTTTTTTTTT+TGG - chr1.3:43875369-43875388 None:intergenic 20.0%
! AAAAAAAATGCTACAGAGAT+AGG + chr1.3:43875372-43875391 MS.gene81723:intron 25.0%
! AAATGACTACAATCATTACT+TGG + chr1.3:43874868-43874887 MS.gene81723:CDS 25.0%
! AATGATGGTATTAGAAAGAA+GGG - chr1.3:43874504-43874523 None:intergenic 25.0%
! AATTTCATTGAATAAACGCA+GGG + chr1.3:43875644-43875663 MS.gene81723:intron 25.0%
! ACTAAAAGCCATAATTAAGA+AGG + chr1.3:43875555-43875574 MS.gene81723:intron 25.0%
! ATCATTGTTATAGGACAAAT+GGG + chr1.3:43874263-43874282 MS.gene81723:intron 25.0%
! CTAAAAGCCATAATTAAGAA+GGG + chr1.3:43875556-43875575 MS.gene81723:intron 25.0%
! GAAGGGTAAATTAATTAACT+AGG - chr1.3:43874487-43874506 None:intergenic 25.0%
! GATAGGATTAAATACAAGTT+AGG + chr1.3:43875389-43875408 MS.gene81723:intron 25.0%
! TAATGATGGTATTAGAAAGA+AGG - chr1.3:43874505-43874524 None:intergenic 25.0%
! TAATTTCATTGAATAAACGC+AGG + chr1.3:43875643-43875662 MS.gene81723:intron 25.0%
! TATTGAATCAACTTTCTTTC+GGG + chr1.3:43876078-43876097 MS.gene81723:CDS 25.0%
! TTAGAAACCCTTCTTAATTA+TGG - chr1.3:43875566-43875585 None:intergenic 25.0%
!! GTATTTGATACATTTTCTTC+AGG + chr1.3:43874740-43874759 MS.gene81723:CDS 25.0%
!! TACCATAATTTGTGAATGAT+TGG - chr1.3:43874656-43874675 None:intergenic 25.0%
!! TATGACTTTTCTTAAGTGAT+TGG + chr1.3:43874201-43874220 MS.gene81723:intron 25.0%
!! TATTTTTCTCTTTCCATTCT+TGG - chr1.3:43875467-43875486 None:intergenic 25.0%
!!! AGAGAGTATAGTCATTTTTT+TGG - chr1.3:43874808-43874827 None:intergenic 25.0%
!!! AGTGTTTCAATTGATAATGA+TGG - chr1.3:43874519-43874538 None:intergenic 25.0%
!!! TCAATTTGAGTTGTCATATT+TGG - chr1.3:43874767-43874786 None:intergenic 25.0%
!!! TCATATAAATTTTTTGAGGG+TGG + chr1.3:43875119-43875138 MS.gene81723:intron 25.0%
AATTAACTAGGAACTTACCA+AGG - chr1.3:43874475-43874494 None:intergenic 30.0%
ACTTACATTCTTTCGACTTA+AGG - chr1.3:43875504-43875523 None:intergenic 30.0%
AGAGACATAAGCAATAGAAT+TGG - chr1.3:43874840-43874859 None:intergenic 30.0%
AGGATTTAAGAGAATTGTTG+TGG + chr1.3:43875733-43875752 MS.gene81723:CDS 30.0%
ATCTTGTCCATCATTGTTAT+AGG + chr1.3:43874254-43874273 MS.gene81723:intron 30.0%
CACCAATCATTCACAAATTA+TGG + chr1.3:43874651-43874670 MS.gene81723:CDS 30.0%
CATCATTGTTATAGGACAAA+TGG + chr1.3:43874262-43874281 MS.gene81723:intron 30.0%
CATTTGTCCTATAACAATGA+TGG - chr1.3:43874264-43874283 None:intergenic 30.0%
CTTACATTCTTTCGACTTAA+GGG - chr1.3:43875503-43875522 None:intergenic 30.0%
GGATTTAAGAGAATTGTTGT+GGG + chr1.3:43875734-43875753 MS.gene81723:CDS 30.0%
GTAAGTTTATGGAGATCATT+TGG + chr1.3:43875518-43875537 MS.gene81723:intron 30.0%
GTCGAAAGAATGTAAGTTTA+TGG + chr1.3:43875507-43875526 MS.gene81723:intron 30.0%
TAAAACCTATATCCGATTCA+TGG + chr1.3:43874375-43874394 MS.gene81723:CDS 30.0%
TCAAACGTTCCTTAATGTTA+TGG - chr1.3:43875970-43875989 None:intergenic 30.0%
TCATTGTTATAGGACAAATG+GGG + chr1.3:43874264-43874283 MS.gene81723:intron 30.0%
TGAAATTGTACATCCAAGAA+TGG + chr1.3:43875451-43875470 MS.gene81723:intron 30.0%
TGATTTCAATCCCAAATACT+TGG - chr1.3:43874633-43874652 None:intergenic 30.0%
TTGAAGATGAATCAAATTGG+TGG - chr1.3:43875708-43875727 None:intergenic 30.0%
TTGATTCATCTTCAAAGCTT+AGG + chr1.3:43875713-43875732 MS.gene81723:CDS 30.0%
! ATTGGTTCAATAAGTTGTTG+TGG - chr1.3:43875850-43875869 None:intergenic 30.0%
! TGAATCGGATATAGGTTTTA+TGG - chr1.3:43874375-43874394 None:intergenic 30.0%
!! ACTATTGCAACTTTGAAATG+AGG - chr1.3:43875804-43875823 None:intergenic 30.0%
!! ATCACTGATTCAATGAAAGA+TGG - chr1.3:43875674-43875693 None:intergenic 30.0%
!! GCTTTGAAGATGAATCAAAT+TGG - chr1.3:43875711-43875730 None:intergenic 30.0%
!! TCACTGATTCAATGAAAGAT+GGG - chr1.3:43875673-43875692 None:intergenic 30.0%
!! TTTTTGAAGGATGATTGAGA+TGG - chr1.3:43874310-43874329 None:intergenic 30.0%
!!! AGTCATTTTTTTGGATGACT+TGG - chr1.3:43874799-43874818 None:intergenic 30.0%
!!! TATAAATTTTTTGAGGGTGG+CGG + chr1.3:43875122-43875141 MS.gene81723:intron 30.0%
ATATTGTGCAGCCAAGTATT+TGG + chr1.3:43874619-43874638 MS.gene81723:intron 35.0%
CCTTAATGTTATGGCTAGAA+GGG - chr1.3:43875961-43875980 None:intergenic 35.0%
GAAGTTGAACCAAGAAACAA+AGG + chr1.3:43875877-43875896 MS.gene81723:CDS 35.0%
GAATGCTGTGTATAATGAGT+TGG + chr1.3:43876129-43876148 MS.gene81723:CDS 35.0%
TATGGGATGAACTTTGCATA+TGG + chr1.3:43874707-43874726 MS.gene81723:CDS 35.0%
TATTGTGCAGCCAAGTATTT+GGG + chr1.3:43874620-43874639 MS.gene81723:intron 35.0%
TCCTTAATGTTATGGCTAGA+AGG - chr1.3:43875962-43875981 None:intergenic 35.0%
TGAAACTATCGAAAATGCCT+AGG - chr1.3:43875922-43875941 None:intergenic 35.0%
TTGGCTGCACAATATATAAG+AGG - chr1.3:43874614-43874633 None:intergenic 35.0%
! TAGGCATTTTCGATAGTTTC+AGG + chr1.3:43875921-43875940 MS.gene81723:CDS 35.0%
! TGAGAGAAGTACAAGTACTA+GGG - chr1.3:43874009-43874028 None:intergenic 35.0%
! TTTTTGATAAGCAAGGAGAG+TGG - chr1.3:43875214-43875233 None:intergenic 35.0%
!! CATTTTCGATAGTTTCAGGT+CGG + chr1.3:43875925-43875944 MS.gene81723:CDS 35.0%
!!! AGAGTTTTAACTGACTTCCT+TGG + chr1.3:43874455-43874474 MS.gene81723:CDS 35.0%
!!! TTTTTGGATGACTTGGTTGA+AGG - chr1.3:43874792-43874811 None:intergenic 35.0%
AACTTTGCATATGGTGGTAC+AGG + chr1.3:43874716-43874735 MS.gene81723:CDS 40.0%
AATCATTACTTGGCCACAGA+TGG + chr1.3:43874878-43874897 MS.gene81723:CDS 40.0%
AATGCCTAGGATTGTGAATG+TGG - chr1.3:43875909-43875928 None:intergenic 40.0%
ACTCTCCATGAATCGGATAT+AGG - chr1.3:43874383-43874402 None:intergenic 40.0%
ATATGGGACTCTCCATGAAT+CGG - chr1.3:43874390-43874409 None:intergenic 40.0%
ATTGCTTATGTCTCTGTTGC+TGG + chr1.3:43874845-43874864 MS.gene81723:CDS 40.0%
CAAGTACTAGGGAAAGACAT+AGG - chr1.3:43873998-43874017 None:intergenic 40.0%
CCATACTTCAAATCCTGTTC+GGG - chr1.3:43874692-43874711 None:intergenic 40.0%
CCCATACTTCAAATCCTGTT+CGG - chr1.3:43874693-43874712 None:intergenic 40.0%
CCCTTCTAGCCATAACATTA+AGG + chr1.3:43875958-43875977 MS.gene81723:CDS 40.0%
CTAGTACTTGTACTTCTCTC+AGG + chr1.3:43874008-43874027 MS.gene81723:CDS 40.0%
GGTTCAACTTCGTAACAGAT+TGG - chr1.3:43875868-43875887 None:intergenic 40.0%
GTAAGCGATGAGTATACTTG+TGG + chr1.3:43876007-43876026 MS.gene81723:CDS 40.0%
TAATAACATAGTGCCCGAAC+AGG + chr1.3:43874676-43874695 MS.gene81723:CDS 40.0%
TTGAAATGAGGTTTCAGCAG+TGG - chr1.3:43875792-43875811 None:intergenic 40.0%
! CCGAACAGGATTTGAAGTAT+GGG + chr1.3:43874690-43874709 MS.gene81723:CDS 40.0%
! CTGAGAGAAGTACAAGTACT+AGG - chr1.3:43874010-43874029 None:intergenic 40.0%
! TGGTGTGTTCCTTTGTTTCT+TGG - chr1.3:43875889-43875908 None:intergenic 40.0%
ACAAATGGGGATGCAAGTTG+AGG + chr1.3:43874277-43874296 MS.gene81723:CDS 45.0%
AGTTGTTGTGGAGAGCTACA+AGG - chr1.3:43875838-43875857 None:intergenic 45.0%
CACACCACATTCACAATCCT+AGG + chr1.3:43875902-43875921 MS.gene81723:CDS 45.0%
CATAACCTTTCCCCGAAAAC+CGG + chr1.3:43874412-43874431 MS.gene81723:CDS 45.0%
CATTCCAACCTGCTTGTGTT+GGG - chr1.3:43876114-43876133 None:intergenic 45.0%
GATTCATGGAGAGTCCCATA+TGG + chr1.3:43874389-43874408 MS.gene81723:CDS 45.0%
GGAGATTCGTATGTCGATAC+TGG + chr1.3:43874344-43874363 MS.gene81723:CDS 45.0%
GGGATGAACTTTGCATATGG+TGG + chr1.3:43874710-43874729 MS.gene81723:CDS 45.0%
GGGGAAAGGTTATGCCATAT+GGG - chr1.3:43874406-43874425 None:intergenic 45.0%
GTACTAGGGAAAGACATAGG+AGG - chr1.3:43873995-43874014 None:intergenic 45.0%
GTATCATCGACATCCCAACT+AGG - chr1.3:43875177-43875196 None:intergenic 45.0%
GTCAGTTAAAACTCTGCCGT+CGG - chr1.3:43874450-43874469 None:intergenic 45.0%
GTGGGTGATTTACAACCTCT+TGG + chr1.3:43875752-43875771 MS.gene81723:CDS 45.0%
TACCAAAAGAGAGCCATCTG+TGG - chr1.3:43874894-43874913 None:intergenic 45.0%
! CCCGAACAGGATTTGAAGTA+TGG + chr1.3:43874689-43874708 MS.gene81723:CDS 45.0%
!! AGAATCTTCCAGCCGGTTTT+CGG - chr1.3:43874427-43874446 None:intergenic 45.0%
AGGATGATTGAGATGGCGAG+TGG - chr1.3:43874303-43874322 None:intergenic 50.0%
CAGTTACACCCAACACAAGC+AGG + chr1.3:43876103-43876122 MS.gene81723:CDS 50.0%
CATCGACATCCCAACTAGGT+TGG - chr1.3:43875173-43875192 None:intergenic 50.0%
CGGGGAAAGGTTATGCCATA+TGG - chr1.3:43874407-43874426 None:intergenic 50.0%
GAGAGTGGACAAGCATCAAG+CGG - chr1.3:43875199-43875218 None:intergenic 50.0%
GCATTCCAACCTGCTTGTGT+TGG - chr1.3:43876115-43876134 None:intergenic 50.0%
GCTTGAGGAACACAACCAAG+AGG - chr1.3:43875770-43875789 None:intergenic 50.0%
TACACCCAACACAAGCAGGT+TGG + chr1.3:43876107-43876126 MS.gene81723:CDS 50.0%
! CGTTTGAAGCCATGCTGCAT+CGG + chr1.3:43875983-43876002 MS.gene81723:CDS 50.0%
!! AATCTTCCAGCCGGTTTTCG+GGG - chr1.3:43874425-43874444 None:intergenic 50.0%
!! GAATCTTCCAGCCGGTTTTC+GGG - chr1.3:43874426-43874445 None:intergenic 50.0%
!!! TTTTTTGAGGGTGGCGGCAT+AGG + chr1.3:43875128-43875147 MS.gene81723:intron 50.0%
GAGGTTTCAGCAGTGGCTTG+AGG - chr1.3:43875785-43875804 None:intergenic 55.0%
TCGCTTACACCGATGCAGCA+TGG - chr1.3:43875995-43876014 None:intergenic 55.0%
! GGCCACAGATGGCTCTCTTT+TGG + chr1.3:43874889-43874908 MS.gene81723:CDS 55.0%
! TCCCAACTAGGTTGGCACTC+CGG - chr1.3:43875165-43875184 None:intergenic 55.0%
ACCTTTCCCCGAAAACCGGC+TGG + chr1.3:43874416-43874435 MS.gene81723:CDS 60.0%
CCGGCTGGAAGATTCTCCGA+CGG + chr1.3:43874431-43874450 MS.gene81723:CDS 60.0%
CCGTCGGAGAATCTTCCAGC+CGG - chr1.3:43874434-43874453 None:intergenic 60.0%
! CCCAACTAGGTTGGCACTCC+GGG - chr1.3:43875164-43875183 None:intergenic 60.0%
! CCCGGAGTGCCAACCTAGTT+GGG + chr1.3:43875161-43875180 MS.gene81723:intron 60.0%
! TCCCGGAGTGCCAACCTAGT+TGG + chr1.3:43875160-43875179 MS.gene81723:intron 60.0%
! TTGAGGGTGGCGGCATAGGA+TGG + chr1.3:43875132-43875151 MS.gene81723:intron 60.0%
!! GGCATAGGATGGAGGTGTCC+CGG + chr1.3:43875143-43875162 MS.gene81723:intron 60.0%
!! TCCAGCCGGTTTTCGGGGAA+AGG - chr1.3:43874420-43874439 None:intergenic 60.0%
! AGGGTGGCGGCATAGGATGG+AGG + chr1.3:43875135-43875154 MS.gene81723:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 43873966 43876183 43873966 ID=MS.gene81723
chr1.3 mRNA 43873966 43876183 43873966 ID=MS.gene81723.t1;Parent=MS.gene81723
chr1.3 exon 43873966 43874029 43873966 ID=MS.gene81723.t1.exon1;Parent=MS.gene81723.t1
chr1.3 CDS 43873966 43874029 43873966 ID=cds.MS.gene81723.t1;Parent=MS.gene81723.t1
chr1.3 exon 43874276 43874476 43874276 ID=MS.gene81723.t1.exon2;Parent=MS.gene81723.t1
chr1.3 CDS 43874276 43874476 43874276 ID=cds.MS.gene81723.t1;Parent=MS.gene81723.t1
chr1.3 exon 43874630 43874910 43874630 ID=MS.gene81723.t1.exon3;Parent=MS.gene81723.t1
chr1.3 CDS 43874630 43874910 43874630 ID=cds.MS.gene81723.t1;Parent=MS.gene81723.t1
chr1.3 exon 43875665 43876183 43875665 ID=MS.gene81723.t1.exon4;Parent=MS.gene81723.t1
chr1.3 CDS 43875665 43876183 43875665 ID=cds.MS.gene81723.t1;Parent=MS.gene81723.t1
Gene Sequence

>MS.gene81723

ATGGACTCACAAAAGCAACTTTTCATCCTCCTATGTCTTTCCCTAGTACTTGTACTTCTCTCAGGTATATATTTGTATGAATTTAATTTAAATCTTAGGGAAATATGTTAATGAATTTATGATCATGAAATTTTAATACAATCTATAGTAAATGTGTTTTTGTAACCATACTAATAATGCGAAATATTCATTGATTTTGTCAATGACTTAATTAATATATATATTCAACTTTTTATATGACTTTTCTTAAGTGATTGGTGATTAATAAAAATCTTAAACTAATTGTACATCTTGTCCATCATTGTTATAGGACAAATGGGGATGCAAGTTGAGGCCACTCGCCATCTCAATCATCCTTCAAAAAAATTGTTTGTATTCGGAGATTCGTATGTCGATACTGGCAACACCATAAAACCTATATCCGATTCATGGAGAGTCCCATATGGCATAACCTTTCCCCGAAAACCGGCTGGAAGATTCTCCGACGGCAGAGTTTTAACTGACTTCCTTGGTAAGTTCCTAGTTAATTAATTTACCCTTCTTTCTAATACCATCATTATCAATTGAAACACTACAAAGTGCAATGCTTTTTAAGTAACGTGTTTTATTTTTTTTTAACTTGAGTAATTGGAATTAATAATGTTTCCTCTTATATATTGTGCAGCCAAGTATTTGGGATTGAAATCACCAATCATTCACAAATTATGGTATAATAACATAGTGCCCGAACAGGATTTGAAGTATGGGATGAACTTTGCATATGGTGGTACAGGTGTATTTGATACATTTTCTTCAGGACCAAATATGACAACTCAAATTGATTCCTTCAACCAAGTCATCCAAAAAAATGACTATACTCTCTCAGATATCACCAATTCTATTGCTTATGTCTCTGTTGCTGGAAATGACTACAATCATTACTTGGCCACAGATGGCTCTCTTTTGGTAATTTTAATCATCATACTTTCTATATTTCTATGATGTAAAAGTATGAAACTCAAAACAGAAAATTTTAAATTTAAAAACATAAATTATATATTCTTTATAATGATGATGATGATAATAATTTAATTATAAAAAATTTAAAATAAATATTGTGTAACACTAGCTCAATATCTCAAAAATATAAAGATAAAAGACTCATATAAAAGACTCATATAAATTTTTTGAGGGTGGCGGCATAGGATGGAGGTGTCCCGGAGTGCCAACCTAGTTGGGATGTCGATGATACCGCTTGATGCTTGTCCACTCTCCTTGCTTATCAAAAAAAAAAATGCTATAGACATCTCAAAAAAATAAAGATAAAAAAACTCATATAGTAAACAACTATGCTATAGACATCTAAAAAAAAAAATAAAGATAAAAAACTTAAATAGTAAACAACTATGCTATAGACATCTCCAAAAAAAAAAAATGCTACAGAGATAGGATTAAATACAAGTTAGGAAGAAATGTATTTTTAGAAAAAAAATGAAAATAAACTTTTGAAATTGTACATCCAAGAATGGAAAGAGAAAAATAGAAAGTAAATTAACCCTTAAGTCGAAAGAATGTAAGTTTATGGAGATCATTTGGAAACTTACTGAAAAACTAAAAGCCATAATTAAGAAGGGTTTCTAAAATTGCATTAATTTTTTCATCTATTACTTTACATATTATAAATGAATTTTAACAATTTAATTTCATTGAATAAACGCAGGGTTTCCCATCTTTCATTGAATCAGTGATTAAACAAATAACCACCAATTTGATTCATCTTCAAAGCTTAGGATTTAAGAGAATTGTTGTGGGTGATTTACAACCTCTTGGTTGTGTTCCTCAAGCCACTGCTGAAACCTCATTTCAAAGTTGCAATAGTACATTTAATGACCTTGTAGCTCTCCACAACAACTTATTGAACCAATCTGTTACGAAGTTGAACCAAGAAACAAAGGAACACACCACATTCACAATCCTAGGCATTTTCGATAGTTTCAGGTCGGTGTTGAATCACCCTTCTAGCCATAACATTAAGGAACGTTTGAAGCCATGCTGCATCGGTGTAAGCGATGAGTATACTTGTGGAAGTGTAGATTCTGAACATACTTCTAATAAATATTTGGTTTGTGAAAATATTGAATCAACTTTCTTTCGGGATCAGTTACACCCAACACAAGCAGGTTGGAATGCTGTGTATAATGAGTTGGAGAAGAAAAGCCTTCATCAAATTTTATACTAG
Protein sequence

>MS.gene81723.t1

MDSQKQLFILLCLSLVLVLLSGQMGMQVEATRHLNHPSKKLFVFGDSYVDTGNTIKPISDSWRVPYGITFPRKPAGRFSDGRVLTDFLAKYLGLKSPIIHKLWYNNIVPEQDLKYGMNFAYGGTGVFDTFSSGPNMTTQIDSFNQVIQKNDYTLSDITNSIAYVSVAGNDYNHYLATDGSLLGFPSFIESVIKQITTNLIHLQSLGFKRIVVGDLQPLGCVPQATAETSFQSCNSTFNDLVALHNNLLNQSVTKLNQETKEHTTFTILGIFDSFRSVLNHPSSHNIKERLKPCCIGVSDEYTCGSVDSEHTSNKYLVCENIESTFFRDQLHPTQAGWNAVYNELEKKSLHQILY