AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81724

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81724.t1 MTR_1g060500 95.822 359 14 1 1 358 1 359 0.0 711
MS.gene81724.t1 MTR_1g060490 74.095 359 81 5 1 358 1 348 0.0 523
MS.gene81724.t1 MTR_1g060520 72.905 358 62 3 1 358 1 323 0.0 516
MS.gene81724.t1 MTR_7g104220 59.317 322 119 7 40 358 42 354 6.85e-132 381
MS.gene81724.t1 MTR_1g092740 49.211 317 140 8 40 349 38 340 1.24e-98 296
MS.gene81724.t1 MTR_1g092750 44.892 323 156 8 35 349 35 343 1.50e-85 263
MS.gene81724.t1 MTR_1g092690 42.857 336 172 7 20 349 31 352 7.91e-85 261
MS.gene81724.t1 MTR_1g092760 44.037 327 163 7 38 358 37 349 1.30e-84 260
MS.gene81724.t1 MTR_1g060530 67.890 109 34 1 159 266 6 114 3.64e-43 146
MS.gene81724.t1 MTR_3g098270 30.218 321 188 14 41 339 35 341 2.97e-34 130
MS.gene81724.t1 MTR_8g022810 26.257 358 230 12 9 348 14 355 6.90e-33 126
MS.gene81724.t1 MTR_2g044100 30.769 325 178 13 41 338 44 348 1.15e-32 126
MS.gene81724.t1 MTR_5g084750 28.530 347 214 12 10 338 3 333 1.10e-31 122
MS.gene81724.t1 MTR_5g084770 29.201 363 218 13 11 353 4 347 1.70e-31 122
MS.gene81724.t1 MTR_5g084790 30.469 384 210 16 1 357 1 354 1.86e-30 119
MS.gene81724.t1 MTR_5g009100 31.562 320 176 14 42 337 48 348 1.77e-29 117
MS.gene81724.t1 MTR_3g082830 30.088 339 200 13 41 358 39 361 4.70e-29 115
MS.gene81724.t1 MTR_3g005660 28.571 350 200 11 12 338 20 342 8.60e-29 115
MS.gene81724.t1 MTR_8g075230 28.011 357 227 12 5 344 2 345 1.28e-28 114
MS.gene81724.t1 MTR_3g024510 24.668 377 228 13 10 356 12 362 1.57e-28 114
MS.gene81724.t1 MTR_4g035353 28.963 328 195 14 41 344 32 345 1.80e-28 114
MS.gene81724.t1 MTR_7g116870 27.410 332 199 11 39 340 32 351 2.00e-28 114
MS.gene81724.t1 MTR_2g015080 28.457 376 211 18 1 345 9 357 2.17e-28 114
MS.gene81724.t1 MTR_8g031390 27.557 352 212 14 8 340 10 337 2.85e-28 114
MS.gene81724.t1 MTR_8g022790 28.571 350 207 13 8 338 7 332 3.36e-28 113
MS.gene81724.t1 MTR_1g092710 35.500 200 93 7 152 349 3 168 8.86e-28 107
MS.gene81724.t1 MTR_5g022630 28.571 350 215 12 13 342 18 352 1.61e-27 111
MS.gene81724.t1 MTR_8g031400 26.211 351 219 13 8 340 10 338 3.39e-27 110
MS.gene81724.t1 MTR_8g028160 26.765 340 195 10 39 340 35 358 2.90e-26 108
MS.gene81724.t1 MTR_8g031430 27.586 319 194 12 41 340 38 338 3.62e-26 107
MS.gene81724.t1 MTR_1g025760 26.064 376 244 12 1 357 42 402 3.83e-26 108
MS.gene81724.t1 MTR_0565s0010 25.223 337 217 10 42 356 34 357 4.74e-26 107
MS.gene81724.t1 MTR_1g079540 26.205 332 210 10 37 348 28 344 2.10e-25 105
MS.gene81724.t1 MTR_2g017965 28.704 324 185 13 41 342 34 333 2.21e-25 105
MS.gene81724.t1 MTR_3g464730 28.739 341 201 12 41 357 29 351 3.92e-25 104
MS.gene81724.t1 MTR_7g116520 26.316 323 197 10 39 338 33 337 4.61e-25 104
MS.gene81724.t1 MTR_7g116510 26.506 332 210 12 39 350 24 341 1.02e-24 103
MS.gene81724.t1 MTR_2g084585 28.571 329 198 12 41 348 31 343 1.05e-24 103
MS.gene81724.t1 MTR_4g087985 25.068 367 221 15 6 345 14 353 1.20e-24 103
MS.gene81724.t1 MTR_1g079530 26.685 356 215 13 11 348 9 336 1.41e-24 103
MS.gene81724.t1 MTR_5g083040 25.893 336 209 10 36 346 28 348 3.24e-24 102
MS.gene81724.t1 MTR_3g021460 27.673 318 185 11 41 339 32 323 8.02e-24 100
MS.gene81724.t1 MTR_3g114090 27.928 333 209 13 41 355 37 356 1.50e-23 100
MS.gene81724.t1 MTR_3g052490 26.586 331 204 13 41 348 33 347 1.79e-23 100
MS.gene81724.t1 MTR_3g052580 25.152 330 209 14 41 348 29 342 2.03e-23 100
MS.gene81724.t1 MTR_3g052580 25.152 330 209 14 41 348 28 341 2.46e-23 100
MS.gene81724.t1 MTR_1g069175 24.269 342 218 11 31 348 24 348 2.76e-23 99.8
MS.gene81724.t1 MTR_3g052480 26.284 331 206 13 41 348 34 349 3.91e-23 99.4
MS.gene81724.t1 MTR_5g022640 26.496 351 220 12 13 342 18 351 8.53e-23 98.2
MS.gene81724.t1 MTR_8g031420 26.611 357 224 15 1 340 1 336 8.73e-23 98.2
MS.gene81724.t1 MTR_5g074270 27.327 333 203 15 41 349 34 351 1.19e-22 97.8
MS.gene81724.t1 MTR_4g056160 28.037 321 195 10 41 339 28 334 1.31e-22 97.8
MS.gene81724.t1 MTR_3g005650 26.012 346 205 14 15 339 14 329 2.28e-22 97.1
MS.gene81724.t1 MTR_2g461580 26.235 324 199 11 41 348 32 331 3.52e-22 96.3
MS.gene81724.t1 MTR_8g031390 27.358 318 193 13 8 306 10 308 3.53e-22 95.9
MS.gene81724.t1 MTR_6g021530 23.333 360 228 12 13 348 8 343 3.81e-22 96.7
MS.gene81724.t1 MTR_4g056280 28.349 321 191 13 41 339 31 334 5.29e-22 95.9
MS.gene81724.t1 MTR_2g017955 27.684 354 206 13 13 344 9 334 5.38e-22 96.3
MS.gene81724.t1 MTR_7g116570 24.507 355 220 12 8 338 7 337 6.61e-22 95.9
MS.gene81724.t1 MTR_1g025720 25.745 369 235 13 9 357 9 358 1.02e-21 95.1
MS.gene81724.t1 MTR_1g024890 25.152 330 216 10 37 348 29 345 1.45e-21 94.7
MS.gene81724.t1 MTR_0009s0250 25.895 363 219 16 1 345 1 331 2.61e-21 94.0
MS.gene81724.t1 MTR_2g100620 28.616 318 197 11 41 340 32 337 2.93e-21 94.0
MS.gene81724.t1 MTR_4g108690 25.460 326 216 10 42 351 29 343 3.83e-21 93.6
MS.gene81724.t1 MTR_1g030230 24.332 374 225 15 13 349 9 361 4.12e-21 93.6
MS.gene81724.t1 MTR_1g025680 26.531 343 219 14 15 339 11 338 4.34e-21 94.4
MS.gene81724.t1 MTR_8g087890 24.695 328 193 13 42 340 33 335 4.46e-21 93.6
MS.gene81724.t1 MTR_1g025780 23.442 337 221 11 41 357 42 361 7.66e-21 92.8
MS.gene81724.t1 MTR_7g116500 24.234 359 222 12 2 337 4 335 1.26e-20 92.0
MS.gene81724.t1 MTR_8g079050 24.852 338 212 14 42 352 39 361 2.04e-20 91.7
MS.gene81724.t1 MTR_5g078210 25.460 326 205 12 42 347 27 334 2.12e-20 91.3
MS.gene81724.t1 MTR_7g033150 24.064 374 234 11 13 348 7 368 2.76e-20 91.7
MS.gene81724.t1 MTR_1g030220 25.069 363 232 13 16 348 16 368 3.70e-20 91.3
MS.gene81724.t1 MTR_2g033930 27.987 318 197 16 41 340 33 336 3.82e-20 90.9
MS.gene81724.t1 MTR_4g104240 24.607 382 212 14 7 346 10 357 5.09e-20 90.5
MS.gene81724.t1 MTR_1g025910 26.667 330 209 11 45 356 41 355 6.00e-20 90.5
MS.gene81724.t1 MTR_3g023220 29.012 324 174 17 41 340 34 325 6.34e-20 90.1
MS.gene81724.t1 MTR_1g030268 24.796 367 236 15 11 349 13 367 7.05e-20 90.1
MS.gene81724.t1 MTR_7g087190 24.377 361 215 15 28 348 33 375 7.25e-20 90.5
MS.gene81724.t1 MTR_8g075220 25.862 348 210 13 35 353 35 363 7.96e-20 89.7
MS.gene81724.t1 MTR_1g030275 24.084 382 233 15 1 348 7 365 8.92e-20 90.1
MS.gene81724.t1 MTR_3g435540 25.915 328 212 9 42 351 25 339 1.04e-19 89.4
MS.gene81724.t1 MTR_3g069780 27.011 348 197 14 37 348 27 353 1.25e-19 89.4
MS.gene81724.t1 MTR_8g087870 28.302 318 182 14 41 338 30 321 1.36e-19 89.0
MS.gene81724.t1 MTR_4g019880 24.930 357 224 13 4 338 3 337 1.39e-19 89.4
MS.gene81724.t1 MTR_2g015670 27.485 342 191 12 37 348 28 342 1.46e-19 89.0
MS.gene81724.t1 MTR_5g093090 25.989 354 216 15 9 340 6 335 3.06e-19 88.2
MS.gene81724.t1 MTR_8g014910 27.485 342 186 13 41 348 33 346 3.09e-19 88.2
MS.gene81724.t1 MTR_3g438030 27.874 348 194 15 37 348 27 353 3.19e-19 88.2
MS.gene81724.t1 MTR_1g025700 24.523 367 236 14 10 355 23 369 3.19e-19 88.2
MS.gene81724.t1 MTR_8g075200 26.879 346 204 13 35 353 36 359 3.45e-19 88.6
MS.gene81724.t1 MTR_8g022810 29.130 230 139 8 9 224 14 233 6.39e-19 86.7
MS.gene81724.t1 MTR_7g008060 24.176 364 224 13 3 348 4 333 1.30e-18 86.3
MS.gene81724.t1 MTR_2g015630 26.393 341 200 14 45 350 36 360 1.43e-18 86.7
MS.gene81724.t1 MTR_2g017925 26.934 349 202 12 13 339 9 326 3.31e-18 85.1
MS.gene81724.t1 MTR_3g463960 25.797 345 200 13 37 344 41 366 4.46e-18 85.1
MS.gene81724.t1 MTR_3g463950 25.797 345 200 13 37 344 41 366 4.46e-18 85.1
MS.gene81724.t1 MTR_3g463970 25.797 345 200 13 37 344 41 366 4.46e-18 85.1
MS.gene81724.t1 MTR_3g463940 25.797 345 200 13 37 344 41 366 4.46e-18 85.1
MS.gene81724.t1 MTR_3g114120 26.154 325 206 13 41 348 48 355 1.16e-17 83.6
MS.gene81724.t1 MTR_3g448360 25.291 344 209 13 37 348 26 353 2.29e-17 82.8
MS.gene81724.t1 MTR_2g015650 25.661 378 215 15 13 348 3 356 2.32e-17 82.8
MS.gene81724.t1 MTR_2g015580 24.551 334 213 11 39 344 46 368 2.42e-17 82.8
MS.gene81724.t1 MTR_4g122200 27.190 331 199 17 42 348 37 349 6.38e-17 81.6
MS.gene81724.t1 MTR_6g007095 23.989 371 232 12 1 338 1 354 3.30e-16 80.5
MS.gene81724.t1 MTR_2g015590 26.048 334 201 11 39 340 30 349 3.44e-16 79.3
MS.gene81724.t1 MTR_2g079080 24.926 337 194 14 39 344 29 337 4.83e-16 79.0
MS.gene81724.t1 MTR_7g113860 25.634 355 205 15 33 348 24 358 8.30e-16 78.2
MS.gene81724.t1 MTR_8g074560 25.000 360 224 14 3 338 2 339 1.76e-15 77.4
MS.gene81724.t1 MTR_3g069520 25.882 340 201 15 37 344 27 347 1.83e-15 77.0
MS.gene81724.t1 MTR_2g079090 24.926 337 194 14 39 344 29 337 1.97e-15 77.0
MS.gene81724.t1 MTR_2g017915 24.432 352 194 11 13 341 9 311 3.06e-15 76.3
MS.gene81724.t1 MTR_2g043980 25.429 350 194 14 28 344 24 339 3.74e-15 76.3
MS.gene81724.t1 MTR_0029s0050 25.439 342 194 15 39 348 29 341 4.74e-15 75.9
MS.gene81724.t1 MTR_5g078210 25.660 265 169 9 42 286 27 283 5.23e-15 75.5
MS.gene81724.t1 MTR_2g017875 24.930 357 197 15 41 356 35 361 6.13e-15 75.5
MS.gene81724.t1 MTR_0029s0100 25.439 342 194 15 39 348 29 341 8.86e-15 75.1
MS.gene81724.t1 MTR_7g033165 23.684 342 214 13 41 348 34 362 7.27e-14 72.4
MS.gene81724.t1 MTR_7g111780 24.843 318 207 8 41 340 37 340 1.87e-13 71.2
MS.gene81724.t1 MTR_6g007100 22.527 364 227 14 1 338 1 335 1.07e-12 68.9
MS.gene81724.t1 MTR_5g093090 26.000 300 188 12 9 288 6 291 1.52e-12 67.8
MS.gene81724.t1 MTR_8g038680 22.222 342 215 12 37 340 20 348 4.37e-12 67.0
MS.gene81724.t1 MTR_6g007090 21.563 371 243 12 1 340 1 354 4.86e-12 67.0
MS.gene81724.t1 MTR_1g030268 24.252 301 192 12 11 286 13 302 5.02e-12 66.6
MS.gene81724.t1 MTR_2g015590 27.711 249 144 7 39 258 30 271 8.53e-12 65.9
MS.gene81724.t1 MTR_7g113860 24.207 347 206 14 41 348 36 364 2.19e-11 65.1
MS.gene81724.t1 MTR_1g079590 27.684 177 107 8 37 196 28 200 3.94e-11 62.4
MS.gene81724.t1 MTR_1g082390 26.349 315 179 14 9 296 13 301 9.22e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81724.t1 AT5G03610 52.557 352 147 10 7 350 11 350 1.30e-115 340
MS.gene81724.t1 AT3G09930 48.113 318 149 9 40 350 39 347 6.49e-99 297
MS.gene81724.t1 AT3G09930 48.113 318 149 9 40 350 39 347 6.49e-99 297
MS.gene81724.t1 AT5G03600 41.143 350 168 14 11 348 23 346 3.72e-76 239
MS.gene81724.t1 AT5G03600 41.692 331 160 13 30 348 2 311 6.83e-75 234
MS.gene81724.t1 AT2G36325 35.876 354 201 13 8 348 10 350 4.83e-68 218
MS.gene81724.t1 AT5G03590 37.037 297 130 11 61 350 7 253 2.19e-55 182
MS.gene81724.t1 AT5G03590 31.081 296 118 11 61 350 7 222 1.87e-39 140
MS.gene81724.t1 AT5G03590 43.455 191 97 8 9 195 7 190 5.10e-36 130
MS.gene81724.t1 AT5G41890 29.938 324 194 12 42 340 33 348 4.19e-33 127
MS.gene81724.t1 AT1G53920 27.887 355 227 12 8 346 18 359 5.85e-33 126
MS.gene81724.t1 AT1G20120 29.326 341 208 12 32 353 70 396 5.84e-32 124
MS.gene81724.t1 AT1G20130 29.882 338 201 9 41 354 185 510 4.53e-31 123
MS.gene81724.t1 AT1G20130 29.882 338 201 9 41 354 205 530 4.87e-31 123
MS.gene81724.t1 AT2G30310 27.410 332 206 12 41 351 35 352 1.72e-30 119
MS.gene81724.t1 AT2G31540 27.647 340 207 11 35 349 26 351 4.53e-30 118
MS.gene81724.t1 AT5G08460 29.191 346 206 15 15 339 30 357 5.28e-30 118
MS.gene81724.t1 AT1G58430 28.012 332 204 12 41 351 36 353 1.34e-29 117
MS.gene81724.t1 AT2G40250 28.313 332 199 10 37 344 33 349 1.60e-29 117
MS.gene81724.t1 AT2G04570 29.787 329 194 11 41 348 29 341 4.84e-29 115
MS.gene81724.t1 AT1G20132 27.273 341 215 10 35 356 56 382 1.09e-28 115
MS.gene81724.t1 AT2G19060 28.662 314 197 10 42 344 32 329 3.00e-28 113
MS.gene81724.t1 AT3G14820 27.729 339 212 11 30 351 22 344 9.78e-28 112
MS.gene81724.t1 AT1G28640 28.375 363 202 14 14 339 11 352 2.69e-27 111
MS.gene81724.t1 AT4G10950 28.076 317 197 12 41 339 72 375 3.13e-27 111
MS.gene81724.t1 AT1G29660 27.394 376 214 18 12 356 9 356 3.23e-27 110
MS.gene81724.t1 AT1G75930 26.254 339 209 9 35 356 24 338 3.36e-27 110
MS.gene81724.t1 AT1G75890 28.045 353 214 11 12 342 21 355 1.04e-26 109
MS.gene81724.t1 AT1G75890 28.045 353 214 11 12 342 50 384 1.70e-26 109
MS.gene81724.t1 AT1G71691 26.791 321 190 10 41 338 56 354 2.14e-26 108
MS.gene81724.t1 AT1G06990 27.329 322 198 12 41 341 38 344 3.50e-26 107
MS.gene81724.t1 AT2G24560 25.225 333 212 12 41 351 35 352 6.44e-26 107
MS.gene81724.t1 AT1G59406 26.027 365 231 13 10 356 5 348 8.59e-26 106
MS.gene81724.t1 AT1G59030 26.027 365 231 13 10 356 5 348 8.59e-26 106
MS.gene81724.t1 AT1G58725 26.027 365 231 13 10 356 5 348 8.59e-26 106
MS.gene81724.t1 AT5G15720 27.640 322 198 12 38 338 28 335 9.16e-26 106
MS.gene81724.t1 AT5G33370 25.532 329 214 10 38 348 28 343 1.05e-25 106
MS.gene81724.t1 AT5G42170 26.852 324 207 11 41 348 51 360 1.40e-25 106
MS.gene81724.t1 AT3G14225 28.012 332 210 11 28 340 25 346 1.90e-25 105
MS.gene81724.t1 AT2G30220 26.061 330 213 11 41 351 34 351 3.05e-25 105
MS.gene81724.t1 AT5G40990 28.527 319 195 11 41 338 38 344 5.22e-25 104
MS.gene81724.t1 AT2G03980 27.812 320 190 15 41 338 44 344 7.24e-25 104
MS.gene81724.t1 AT2G03980 27.812 320 190 15 41 338 44 344 7.24e-25 104
MS.gene81724.t1 AT2G03980 27.812 320 190 15 41 338 44 344 7.24e-25 104
MS.gene81724.t1 AT2G03980 27.812 320 190 15 41 338 44 344 7.24e-25 104
MS.gene81724.t1 AT5G18430 27.245 323 196 10 39 338 27 333 7.33e-25 103
MS.gene81724.t1 AT1G71250 26.957 345 218 14 15 340 17 346 9.09e-25 103
MS.gene81724.t1 AT3G14225 27.679 336 210 11 28 340 25 350 9.81e-25 103
MS.gene81724.t1 AT1G73610 26.611 357 207 15 9 344 9 331 1.05e-24 103
MS.gene81724.t1 AT4G10950 27.760 317 194 13 41 339 72 371 1.31e-24 103
MS.gene81724.t1 AT1G33811 27.410 332 183 13 41 338 35 342 1.53e-24 103
MS.gene81724.t1 AT1G75900 25.967 362 236 10 13 357 18 364 1.54e-24 103
MS.gene81724.t1 AT4G26790 27.795 331 208 12 41 353 30 347 2.83e-24 102
MS.gene81724.t1 AT4G26790 27.795 331 208 12 41 353 30 347 2.83e-24 102
MS.gene81724.t1 AT5G22810 29.283 321 193 11 41 340 35 342 3.37e-24 102
MS.gene81724.t1 AT1G75890 27.419 372 205 13 12 342 21 368 3.45e-24 102
MS.gene81724.t1 AT5G45960 28.313 332 201 12 41 349 48 365 5.76e-24 101
MS.gene81724.t1 AT1G20135 27.414 321 192 11 41 344 30 326 7.04e-24 100
MS.gene81724.t1 AT4G01130 27.596 366 204 15 13 340 14 356 8.64e-24 101
MS.gene81724.t1 AT5G45670 24.611 321 203 10 42 340 31 334 9.41e-24 100
MS.gene81724.t1 AT1G75880 26.882 372 225 11 8 353 20 370 1.30e-23 100
MS.gene81724.t1 AT2G42990 27.457 346 206 13 13 338 11 331 1.62e-23 100
MS.gene81724.t1 AT1G75920 25.137 366 219 14 4 348 3 334 2.05e-23 99.8
MS.gene81724.t1 AT2G27360 27.035 344 194 11 39 344 32 356 2.09e-23 100
MS.gene81724.t1 AT1G54020 29.178 353 198 15 7 343 9 325 2.22e-23 100
MS.gene81724.t1 AT4G28780 26.979 341 198 13 36 348 27 344 2.95e-23 99.8
MS.gene81724.t1 AT1G29670 24.725 364 234 13 12 354 9 353 5.18e-23 99.0
MS.gene81724.t1 AT3G53100 26.183 317 205 10 40 339 29 333 5.88e-23 98.6
MS.gene81724.t1 AT1G54030 27.564 312 188 12 38 338 50 334 7.29e-23 99.4
MS.gene81724.t1 AT5G45950 26.944 360 218 14 8 344 6 343 7.49e-23 98.6
MS.gene81724.t1 AT5G33370 29.461 241 150 7 38 261 28 265 8.01e-23 97.8
MS.gene81724.t1 AT1G58520 25.937 347 204 12 34 356 24 341 8.81e-23 98.2
MS.gene81724.t1 AT1G58525 25.937 347 204 12 34 356 24 341 8.81e-23 98.2
MS.gene81724.t1 AT1G29670 25.075 335 216 11 41 354 101 421 1.17e-22 99.0
MS.gene81724.t1 AT5G45910 28.653 349 194 14 39 348 29 361 1.88e-22 97.4
MS.gene81724.t1 AT1G75880 26.829 369 230 13 8 353 20 371 2.58e-22 97.1
MS.gene81724.t1 AT3G48460 27.143 350 193 14 33 344 31 356 3.37e-22 97.1
MS.gene81724.t1 AT3G04290 24.551 334 211 10 38 348 27 342 6.37e-22 95.9
MS.gene81724.t1 AT3G16370 27.463 335 179 14 41 340 31 336 7.15e-22 95.5
MS.gene81724.t1 AT1G53940 25.278 360 233 13 1 338 1 346 1.08e-21 95.5
MS.gene81724.t1 AT1G28650 25.926 378 224 14 7 348 6 363 1.15e-21 95.5
MS.gene81724.t1 AT1G28600 25.731 342 199 13 39 344 30 352 1.34e-21 95.5
MS.gene81724.t1 AT1G28570 24.852 338 204 12 39 342 33 354 1.64e-21 95.1
MS.gene81724.t1 AT1G54000 27.666 347 216 15 1 335 2 325 3.83e-21 94.0
MS.gene81724.t1 AT1G71120 24.490 343 213 13 41 356 32 355 4.36e-21 93.6
MS.gene81724.t1 AT5G15720 27.881 269 169 10 38 286 28 291 4.57e-21 92.8
MS.gene81724.t1 AT1G28610 25.634 355 195 14 39 350 30 358 4.93e-21 93.6
MS.gene81724.t1 AT5G55050 26.036 338 212 15 41 354 40 363 5.03e-21 93.6
MS.gene81724.t1 AT1G23500 26.006 323 194 10 41 344 36 332 5.74e-21 92.8
MS.gene81724.t1 AT1G71691 27.778 270 158 9 40 286 55 310 6.62e-21 92.4
MS.gene81724.t1 AT4G18970 24.062 320 204 10 42 339 30 332 7.65e-21 92.8
MS.gene81724.t1 AT4G18970 24.062 320 204 10 42 339 30 332 9.29e-21 93.2
MS.gene81724.t1 AT1G28670 25.067 371 221 14 11 344 8 358 9.78e-21 92.8
MS.gene81724.t1 AT1G28590 24.668 377 229 13 10 350 7 364 1.11e-20 92.8
MS.gene81724.t1 AT5G03820 27.356 329 204 12 41 348 34 348 1.12e-20 92.4
MS.gene81724.t1 AT5G03820 27.356 329 204 12 41 348 62 376 1.29e-20 92.4
MS.gene81724.t1 AT1G75910 25.414 362 212 13 13 348 5 334 1.46e-20 91.7
MS.gene81724.t1 AT1G54010 27.247 356 216 17 1 340 2 330 1.64e-20 92.0
MS.gene81724.t1 AT2G19010 27.707 314 190 13 41 339 31 322 1.84e-20 91.7
MS.gene81724.t1 AT2G19050 27.742 310 195 11 42 340 33 324 1.95e-20 91.7
MS.gene81724.t1 AT1G28580 25.723 346 191 13 39 342 36 357 2.14e-20 92.0
MS.gene81724.t1 AT2G19010 27.707 314 190 13 41 339 61 352 3.27e-20 91.3
MS.gene81724.t1 AT2G24560 26.103 272 176 10 41 292 35 301 4.01e-20 90.1
MS.gene81724.t1 AT1G74460 24.924 329 214 11 42 351 25 339 7.08e-20 90.1
MS.gene81724.t1 AT1G75920 24.860 358 207 14 27 348 13 344 1.33e-19 89.0
MS.gene81724.t1 AT5G03810 26.140 329 209 11 40 348 30 344 2.61e-19 88.2
MS.gene81724.t1 AT3G14220 26.730 318 203 14 41 346 33 332 3.11e-19 88.2
MS.gene81724.t1 AT3G14210 26.433 314 203 12 37 338 33 330 3.90e-19 88.2
MS.gene81724.t1 AT1G31550 25.352 355 196 13 39 350 35 363 3.92e-19 88.2
MS.gene81724.t1 AT3G50400 24.308 325 207 11 42 340 36 347 4.32e-19 87.8
MS.gene81724.t1 AT5G37690 23.295 352 229 14 8 340 1 330 1.29e-18 86.3
MS.gene81724.t1 AT2G19050 30.769 247 146 11 42 273 33 269 3.42e-18 84.0
MS.gene81724.t1 AT4G30140 25.407 307 200 9 42 338 35 322 5.96e-18 84.3
MS.gene81724.t1 AT1G54030 28.514 249 154 10 38 277 50 283 6.79e-18 83.6
MS.gene81724.t1 AT1G31550 25.634 355 192 15 39 350 35 360 1.77e-17 83.2
MS.gene81724.t1 AT1G75920 24.172 302 188 10 65 348 28 306 2.00e-17 82.4
MS.gene81724.t1 AT1G53940 25.763 295 196 9 9 286 8 296 7.34e-17 80.5
MS.gene81724.t1 AT4G01130 28.197 305 167 12 13 286 14 297 7.40e-17 80.9
MS.gene81724.t1 AT5G63170 23.810 315 205 9 41 341 29 322 1.26e-16 80.5
MS.gene81724.t1 AT1G54790 26.567 335 191 12 44 340 36 353 1.28e-16 80.9
MS.gene81724.t1 AT3G27950 24.931 361 227 13 16 348 10 354 1.37e-16 80.5
MS.gene81724.t1 AT1G53990 25.786 318 198 12 41 338 36 335 2.22e-15 77.0
MS.gene81724.t1 AT1G28660 24.932 365 221 14 14 344 11 356 2.47e-15 77.0
MS.gene81724.t1 AT1G28660 24.324 370 218 14 14 344 11 357 2.63e-15 77.0
MS.gene81724.t1 AT3G26430 24.865 370 221 14 18 348 11 362 3.85e-15 76.3
MS.gene81724.t1 AT1G71691 25.758 198 121 5 150 338 73 253 2.10e-14 73.2
MS.gene81724.t1 AT5G37690 22.792 351 222 15 9 340 2 322 5.88e-14 72.4
MS.gene81724.t1 AT1G09390 22.703 370 228 11 4 344 7 347 5.93e-14 72.8
MS.gene81724.t1 AT1G56670 23.901 364 225 12 7 344 13 350 1.19e-13 72.0
MS.gene81724.t1 AT1G54790 24.599 374 225 13 13 348 6 360 4.11e-13 70.1
MS.gene81724.t1 AT5G15720 23.897 272 175 10 88 340 48 306 5.56e-12 66.6
MS.gene81724.t1 AT5G03980 28.218 202 124 7 165 356 128 318 1.13e-11 65.5

Find 85 sgRNAs with CRISPR-Local

Find 139 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCAATCACTCACAATTTA+TGG 0.125010 1.3:+43854046 MS.gene81724:CDS
ATCCTGAATCAACTTTCTTT+TGG 0.172349 1.3:+43855486 MS.gene81724:CDS
ATATTGTGCAGCCAAGTATT+TGG 0.194450 1.3:+43854014 MS.gene81724:intron
AAATGACTACAATTATTATT+TGG 0.197824 1.3:+43854260 MS.gene81724:CDS
CCTAAGCATGATTTGAAGTA+TGG 0.231574 1.3:+43854084 MS.gene81724:CDS
CTGAGAGAAGTACAAGTAAT+AGG 0.245385 1.3:-43853357 None:intergenic
AAATAAGGTTAAGAAATATT+TGG 0.254696 1.3:+43855454 MS.gene81724:CDS
TACTTTCCATGAATCAAATA+TGG 0.261137 1.3:-43853691 None:intergenic
TTCTTGAATGAGCTTGATTA+AGG 0.268085 1.3:-43854181 None:intergenic
TGGTGTGATCATTGGTTTCT+TGG 0.271411 1.3:-43855289 None:intergenic
GAATTGATTTGGGTCACATT+TGG 0.322331 1.3:-43854159 None:intergenic
TACAATTATTATTTGGAAAC+AGG 0.326642 1.3:+43854267 MS.gene81724:CDS
GATTCATGGAAAGTACCTTA+TGG 0.338294 1.3:+43853699 MS.gene81724:CDS
TCCCAAAAGAAAGTTGATTC+AGG 0.340517 1.3:-43855488 None:intergenic
CTTGATTAAGGAATTGATTT+GGG 0.340519 1.3:-43854169 None:intergenic
GCTTGATTAAGGAATTGATT+TGG 0.343968 1.3:-43854170 None:intergenic
TTTATTGTTATAGGAGAAAT+GGG 0.346902 1.3:+43853573 MS.gene81724:intron
GTTTATTGTTATAGGAGAAA+TGG 0.347957 1.3:+43853572 MS.gene81724:intron
CCTTATGGCATGACCTTTCC+CGG 0.349880 1.3:+43853714 MS.gene81724:CDS
GGAGATTCGTATGTTGATAC+TGG 0.351430 1.3:+43853654 MS.gene81724:CDS
TCCTCAATGTTATGGCTAGA+AGG 0.358556 1.3:-43855362 None:intergenic
TATTGTGCAGCCAAGTATTT+GGG 0.361299 1.3:+43854015 MS.gene81724:intron
AATTGATTTGGGTCACATTT+GGG 0.363992 1.3:-43854158 None:intergenic
GGAAACAGGAGGCGCTTTCC+TGG 0.366383 1.3:+43854281 MS.gene81724:CDS
CTATTACTTGTACTTCTCTC+AGG 0.369805 1.3:+43853358 MS.gene81724:CDS
ATAGCTTATGTCTCTGTTGC+TGG 0.375543 1.3:+43854237 MS.gene81724:CDS
TCAAACGTTCCTCAATGTTA+TGG 0.386495 1.3:-43855370 None:intergenic
TTGTAACAGATTGGTTCAAT+AGG 0.391183 1.3:-43855259 None:intergenic
TTGATTCATCTTCAAAGCTT+AGG 0.395738 1.3:+43855116 MS.gene81724:CDS
GTATTTGAAGTATCTTCTAT+AGG 0.411673 1.3:+43854135 MS.gene81724:CDS
GCTTTGAAGATGAATCAAAT+TGG 0.421198 1.3:-43855111 None:intergenic
GGTTCAACTTTGTAACAGAT+TGG 0.423602 1.3:-43855268 None:intergenic
TGATTTCAATCCCAAATACT+TGG 0.428800 1.3:-43854025 None:intergenic
TGAGAGAAGTACAAGTAATA+GGG 0.429151 1.3:-43853356 None:intergenic
TGTGAATGTGGTGTGATCAT+TGG 0.429796 1.3:-43855297 None:intergenic
ATCACTGATTCAATGAATGA+TGG 0.430574 1.3:-43855074 None:intergenic
AGAGACATAAGCTATAGATT+TGG 0.442979 1.3:-43854229 None:intergenic
CCGGGAAAGGTCATGCCATA+AGG 0.446049 1.3:-43853714 None:intergenic
TCAATGAATGATGGGAAAGA+TGG 0.447912 1.3:-43855065 None:intergenic
TTCCATAAATTGTGAGTGAT+TGG 0.450712 1.3:-43854048 None:intergenic
AACTTTGCCTACGGTGGTAC+AGG 0.462242 1.3:+43854111 MS.gene81724:CDS
CATTCCAACCAGCCTGTGTT+GGG 0.469175 1.3:-43855520 None:intergenic
CAATGAATGATGGGAAAGAT+GGG 0.470047 1.3:-43855064 None:intergenic
CCGTCGGAGAATCTCCCAAC+TGG 0.483926 1.3:-43853741 None:intergenic
AGGATTTGAGAGAATTGTTG+TGG 0.484724 1.3:+43855136 MS.gene81724:CDS
GTAAGCAGTGAGTATAAGTG+TGG 0.489522 1.3:+43855410 MS.gene81724:CDS
ACTATTGCAACTTTGAAATG+AGG 0.493039 1.3:-43855204 None:intergenic
ATTGGTTCAATAGGTTATTG+TGG 0.494824 1.3:-43855250 None:intergenic
GGATTTGAGAGAATTGTTGT+GGG 0.499111 1.3:+43855137 MS.gene81724:CDS
GTGGGAGGTTTACAACCCCT+TGG 0.513522 1.3:+43855155 MS.gene81724:CDS
CCATACTTCAAATCATGCTT+AGG 0.514717 1.3:-43854084 None:intergenic
ACCTTTCCCGGAAAACCAGT+TGG 0.523937 1.3:+43853726 MS.gene81724:CDS
CGTTTGAAGCCATGTTGTGT+TGG 0.526724 1.3:+43855386 MS.gene81724:CDS
GTAATAGGGAAAGACATAAG+AGG 0.535859 1.3:-43853342 None:intergenic
TCACTGATTCAATGAATGAT+GGG 0.538798 1.3:-43855073 None:intergenic
CCTTTCCCGGAAAACCAGTT+GGG 0.539582 1.3:+43853727 MS.gene81724:CDS
GCATTCCAACCAGCCTGTGT+TGG 0.545563 1.3:-43855521 None:intergenic
AAAGACATAAGAGGATGAAA+AGG 0.548154 1.3:-43853333 None:intergenic
CCTCAATGTTATGGCTAGAA+GGG 0.549531 1.3:-43855361 None:intergenic
GGCTTGAGGAAGACAACCAA+GGG 0.551381 1.3:-43855171 None:intergenic
TGCACCCAACACAGGCTGGT+TGG 0.551991 1.3:+43855516 MS.gene81724:CDS
TATAGATTTGGTGATATCTG+AGG 0.561698 1.3:-43854217 None:intergenic
TTTGAGAGAATTGTTGTGGG+AGG 0.562053 1.3:+43855140 MS.gene81724:CDS
CTGCTTACTCCAACACAACA+TGG 0.568466 1.3:-43855395 None:intergenic
TTGAAATGAGGTTTCAGCAG+TGG 0.574553 1.3:-43855192 None:intergenic
AATTATTATTTGGAAACAGG+AGG 0.583609 1.3:+43854270 MS.gene81724:CDS
CAGTTGCACCCAACACAGGC+TGG 0.587629 1.3:+43855512 MS.gene81724:CDS
AGAAATGGGGCAGCAAGTTG+AGG 0.591342 1.3:+43853587 MS.gene81724:CDS
TTGAAGATGAATCAAATTGG+TGG 0.592268 1.3:-43855108 None:intergenic
CTAAGCATGATTTGAAGTAT+GGG 0.594118 1.3:+43854085 MS.gene81724:CDS
CCCTTCTAGCCATAACATTG+AGG 0.594859 1.3:+43855361 MS.gene81724:CDS
ATAGATTTGGTGATATCTGA+GGG 0.598828 1.3:-43854216 None:intergenic
GTCAGTTAAAACTCTGCCGT+CGG 0.606044 1.3:-43853757 None:intergenic
GGTTATTGTGGAGAGCTACA+AGG 0.617827 1.3:-43855238 None:intergenic
GAGGTTTCAGCAGTGGCTTG+AGG 0.618863 1.3:-43855185 None:intergenic
GGATCAGTTGCACCCAACAC+AGG 0.619543 1.3:+43855508 MS.gene81724:CDS
TATGGGATGAACTTTGCCTA+CGG 0.634972 1.3:+43854102 MS.gene81724:CDS
AGGATTATTGAGATGGCGAG+TGG 0.649164 1.3:-43853610 None:intergenic
AATGTCAAGAATTGTGAATG+TGG 0.651158 1.3:-43855309 None:intergenic
AAATACACCTGTACCACCGT+AGG 0.662649 1.3:-43854118 None:intergenic
GGGATGAACTTTGCCTACGG+TGG 0.663668 1.3:+43854105 MS.gene81724:CDS
TGGCTTGAGGAAGACAACCA+AGG 0.680752 1.3:-43855172 None:intergenic
TTATTGTTATAGGAGAAATG+GGG 0.693856 1.3:+43853574 MS.gene81724:intron
CCAGTTGGGAGATTCTCCGA+CGG 0.697686 1.3:+43853741 MS.gene81724:CDS
GCTTGAGGAAGACAACCAAG+GGG 0.783209 1.3:-43855170 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATATATCTATATACA+AGG + chr1.3:43854588-43854607 MS.gene81724:intron 10.0%
!! ATAAATATATCTATATACAA+GGG + chr1.3:43854589-43854608 MS.gene81724:intron 10.0%
!! ATTAAATTAAATAATTTACC+AGG - chr1.3:43854302-43854321 None:intergenic 10.0%
!!! ACATTGATAATATATTAATA+AGG - chr1.3:43854544-43854563 None:intergenic 10.0%
!!! CATTGATAATATATTAATAA+GGG - chr1.3:43854543-43854562 None:intergenic 10.0%
!!! GTAAATTAATCTTTTAAAAA+GGG + chr1.3:43854681-43854700 MS.gene81724:intron 10.0%
!!! TGTAAATTAATCTTTTAAAA+AGG + chr1.3:43854680-43854699 MS.gene81724:intron 10.0%
!!! TTAACTTTTAATAAATTTGT+TGG - chr1.3:43854630-43854649 None:intergenic 10.0%
!!! TTTTAAGTAATTTTTTGAAT+GGG + chr1.3:43853846-43853865 MS.gene81724:intron 10.0%
!!! TTTTTAAGTAATTTTTTGAA+TGG + chr1.3:43853845-43853864 MS.gene81724:intron 10.0%
!! AAATAAGGTTAAGAAATATT+TGG + chr1.3:43855454-43855473 MS.gene81724:CDS 15.0%
!! AAATGACTACAATTATTATT+TGG + chr1.3:43854260-43854279 MS.gene81724:CDS 15.0%
!! AGATTAATTTACAAAAATCA+CGG - chr1.3:43854673-43854692 None:intergenic 15.0%
!!! AAAACAAACAATTTTTTTGA+AGG - chr1.3:43853633-43853652 None:intergenic 15.0%
!!! AGAGACAATTTTATTTTTTA+AGG - chr1.3:43854461-43854480 None:intergenic 15.0%
!!! CAATTTTTCATAAACATTTT+AGG + chr1.3:43853454-43853473 MS.gene81724:intron 15.0%
!!! TATTTATTTTCTCTATTTCT+TGG + chr1.3:43854327-43854346 MS.gene81724:intron 15.0%
!!! TCAAAAAAATTGTTTGTTTT+TGG + chr1.3:43853633-43853652 MS.gene81724:CDS 15.0%
!! ATCTTATGGTTTATTGTTAT+AGG + chr1.3:43853564-43853583 MS.gene81724:intron 20.0%
!! CTAATTAATTGTACATCTTA+TGG + chr1.3:43853550-43853569 MS.gene81724:intron 20.0%
!! GATTAATTTACAAAAATCAC+GGG - chr1.3:43854672-43854691 None:intergenic 20.0%
!! TAAAAACCATATTTGATTCA+TGG + chr1.3:43853685-43853704 MS.gene81724:CDS 20.0%
!! TACAATTATTATTTGGAAAC+AGG + chr1.3:43854267-43854286 MS.gene81724:CDS 20.0%
!! TAGAAGATAAATTACAAGTT+AGG + chr1.3:43854804-43854823 MS.gene81724:intron 20.0%
!! TTTATTGTTATAGGAGAAAT+GGG + chr1.3:43853573-43853592 MS.gene81724:intron 20.0%
!!! ATTAATCTTTTAAAAAGGGA+CGG + chr1.3:43854685-43854704 MS.gene81724:intron 20.0%
!!! GACAACTTTTTTTTTGTAAA+TGG - chr1.3:43854436-43854455 None:intergenic 20.0%
!!! TGAATCAAATATGGTTTTTA+TGG - chr1.3:43853685-43853704 None:intergenic 20.0%
!!! TGTTTCTATTATCATATACT+TGG - chr1.3:43854922-43854941 None:intergenic 20.0%
! AAGTGAATACACTATTAACA+TGG - chr1.3:43853483-43853502 None:intergenic 25.0%
! AATTATTATTTGGAAACAGG+AGG + chr1.3:43854270-43854289 MS.gene81724:CDS 25.0%
! AATTTCATTGAATAAACGCA+GGG + chr1.3:43855038-43855057 MS.gene81724:intron 25.0%
! ACATAAATCCATAGTTTAGA+AGG + chr1.3:43854952-43854971 MS.gene81724:intron 25.0%
! ATCTATCACAATTGTTACAT+AGG - chr1.3:43854785-43854804 None:intergenic 25.0%
! CATAAATCCATAGTTTAGAA+GGG + chr1.3:43854953-43854972 MS.gene81724:intron 25.0%
! CTAATAGCATCATTATCAAT+TGG + chr1.3:43853809-43853828 MS.gene81724:intron 25.0%
! GTTTATTGTTATAGGAGAAA+TGG + chr1.3:43853572-43853591 MS.gene81724:intron 25.0%
! TAATTTCATTGAATAAACGC+AGG + chr1.3:43855037-43855056 MS.gene81724:intron 25.0%
! TACTTTCCATGAATCAAATA+TGG - chr1.3:43853694-43853713 None:intergenic 25.0%
! TCTAAAGATGAAAACCAAAA+CGG + chr1.3:43854882-43854901 MS.gene81724:intron 25.0%
! TTATTGTTATAGGAGAAATG+GGG + chr1.3:43853574-43853593 MS.gene81724:intron 25.0%
!! ATTCTTTCTATTTTCCGTTT+TGG - chr1.3:43854899-43854918 None:intergenic 25.0%
!! CTTGATTAAGGAATTGATTT+GGG - chr1.3:43854172-43854191 None:intergenic 25.0%
!! GTATTTGAAGTATCTTCTAT+AGG + chr1.3:43854135-43854154 MS.gene81724:CDS 25.0%
!!! ATTGATAATGATGCTATTAG+AGG - chr1.3:43853809-43853828 None:intergenic 25.0%
!!! TAAATTTGTTGGAGTAATCA+CGG - chr1.3:43854619-43854638 None:intergenic 25.0%
!!! TTGATAATGATGCTATTAGA+GGG - chr1.3:43853808-43853827 None:intergenic 25.0%
!!! TTTTTGAAGGATTATTGAGA+TGG - chr1.3:43853620-43853639 None:intergenic 25.0%
AAAGACATAAGAGGATGAAA+AGG - chr1.3:43853336-43853355 None:intergenic 30.0%
AATGTCAAGAATTGTGAATG+TGG - chr1.3:43855312-43855331 None:intergenic 30.0%
AGAGACATAAGCTATAGATT+TGG - chr1.3:43854232-43854251 None:intergenic 30.0%
GCTTGATTAAGGAATTGATT+TGG - chr1.3:43854173-43854192 None:intergenic 30.0%
TGATTTCAATCCCAAATACT+TGG - chr1.3:43854028-43854047 None:intergenic 30.0%
TTAGAAACCCTTCTAAACTA+TGG - chr1.3:43854963-43854982 None:intergenic 30.0%
TTCCATAAATTGTGAGTGAT+TGG - chr1.3:43854051-43854070 None:intergenic 30.0%
TTCTTGAATGAGCTTGATTA+AGG - chr1.3:43854184-43854203 None:intergenic 30.0%
TTGAAGATGAATCAAATTGG+TGG - chr1.3:43855111-43855130 None:intergenic 30.0%
TTGATTCATCTTCAAAGCTT+AGG + chr1.3:43855116-43855135 MS.gene81724:CDS 30.0%
! AATGGTCTTACAATTAGAGA+CGG - chr1.3:43854418-43854437 None:intergenic 30.0%
! ATCCTGAATCAACTTTCTTT+TGG + chr1.3:43855486-43855505 MS.gene81724:CDS 30.0%
! ATTGGTTCAATAGGTTATTG+TGG - chr1.3:43855253-43855272 None:intergenic 30.0%
! CTAAGCATGATTTGAAGTAT+GGG + chr1.3:43854085-43854104 MS.gene81724:CDS 30.0%
! TCCTGAATCAACTTTCTTTT+GGG + chr1.3:43855487-43855506 MS.gene81724:CDS 30.0%
! TGAGAGAAGTACAAGTAATA+GGG - chr1.3:43853359-43853378 None:intergenic 30.0%
! TTGACATTTTCGATAGTTTC+AGG + chr1.3:43855324-43855343 MS.gene81724:CDS 30.0%
! TTGTAACAGATTGGTTCAAT+AGG - chr1.3:43855262-43855281 None:intergenic 30.0%
!! AAATTTGTTGGAGTAATCAC+GGG - chr1.3:43854618-43854637 None:intergenic 30.0%
!! AATTGATTTGGGTCACATTT+GGG - chr1.3:43854161-43854180 None:intergenic 30.0%
!! ACTATTGCAACTTTGAAATG+AGG - chr1.3:43855207-43855226 None:intergenic 30.0%
!! ATAGATTTGGTGATATCTGA+GGG - chr1.3:43854219-43854238 None:intergenic 30.0%
!! ATCACTGATTCAATGAATGA+TGG - chr1.3:43855077-43855096 None:intergenic 30.0%
!! GCTTTGAAGATGAATCAAAT+TGG - chr1.3:43855114-43855133 None:intergenic 30.0%
!! TATAGATTTGGTGATATCTG+AGG - chr1.3:43854220-43854239 None:intergenic 30.0%
!! TCACTGATTCAATGAATGAT+GGG - chr1.3:43855076-43855095 None:intergenic 30.0%
AACAGTGAATTCACATACCA+AGG - chr1.3:43853785-43853804 None:intergenic 35.0%
AGGATTTGAGAGAATTGTTG+TGG + chr1.3:43855136-43855155 MS.gene81724:CDS 35.0%
ATATTGTGCAGCCAAGTATT+TGG + chr1.3:43854014-43854033 MS.gene81724:intron 35.0%
CACCAATCACTCACAATTTA+TGG + chr1.3:43854046-43854065 MS.gene81724:CDS 35.0%
CCATACTTCAAATCATGCTT+AGG - chr1.3:43854087-43854106 None:intergenic 35.0%
CTATTACTTGTACTTCTCTC+AGG + chr1.3:43853358-43853377 MS.gene81724:CDS 35.0%
GGATTTGAGAGAATTGTTGT+GGG + chr1.3:43855137-43855156 MS.gene81724:CDS 35.0%
GGTTCAACTTTGTAACAGAT+TGG - chr1.3:43855271-43855290 None:intergenic 35.0%
GTAATAGGGAAAGACATAAG+AGG - chr1.3:43853345-43853364 None:intergenic 35.0%
TATTGTGCAGCCAAGTATTT+GGG + chr1.3:43854015-43854034 MS.gene81724:intron 35.0%
TCAAACGTTCCTCAATGTTA+TGG - chr1.3:43855373-43855392 None:intergenic 35.0%
TTGGCTGCACAATATAAAAG+AGG - chr1.3:43854009-43854028 None:intergenic 35.0%
! CAATGAATGATGGGAAAGAT+GGG - chr1.3:43855067-43855086 None:intergenic 35.0%
! CCTAAGCATGATTTGAAGTA+TGG + chr1.3:43854084-43854103 MS.gene81724:CDS 35.0%
! CTGAGAGAAGTACAAGTAAT+AGG - chr1.3:43853360-43853379 None:intergenic 35.0%
! TCAATGAATGATGGGAAAGA+TGG - chr1.3:43855068-43855087 None:intergenic 35.0%
! TCCCAAAAGAAAGTTGATTC+AGG - chr1.3:43855491-43855510 None:intergenic 35.0%
!! AATCTTTTAAAAAGGGACGG+AGG + chr1.3:43854688-43854707 MS.gene81724:intron 35.0%
!! ATCTTTTAAAAAGGGACGGA+GGG + chr1.3:43854689-43854708 MS.gene81724:intron 35.0%
!! GAATTGATTTGGGTCACATT+TGG - chr1.3:43854162-43854181 None:intergenic 35.0%
!! GATTCATGGAAAGTACCTTA+TGG + chr1.3:43853699-43853718 MS.gene81724:CDS 35.0%
!!! AGAGTTTTAACTGACTTCCT+TGG + chr1.3:43853765-43853784 MS.gene81724:CDS 35.0%
ATAGCTTATGTCTCTGTTGC+TGG + chr1.3:43854237-43854256 MS.gene81724:CDS 40.0%
CCTCAATGTTATGGCTAGAA+GGG - chr1.3:43855364-43855383 None:intergenic 40.0%
GGAGATTCGTATGTTGATAC+TGG + chr1.3:43853654-43853673 MS.gene81724:CDS 40.0%
GTAAGCAGTGAGTATAAGTG+TGG + chr1.3:43855410-43855429 MS.gene81724:CDS 40.0%
GTCTTACAATTAGAGACGGT+AGG - chr1.3:43854414-43854433 None:intergenic 40.0%
TATGGGATGAACTTTGCCTA+CGG + chr1.3:43854102-43854121 MS.gene81724:CDS 40.0%
TCCTCAATGTTATGGCTAGA+AGG - chr1.3:43855365-43855384 None:intergenic 40.0%
TGTGAATGTGGTGTGATCAT+TGG - chr1.3:43855300-43855319 None:intergenic 40.0%
TTGAAATGAGGTTTCAGCAG+TGG - chr1.3:43855195-43855214 None:intergenic 40.0%
TTTGAGAGAATTGTTGTGGG+AGG + chr1.3:43855140-43855159 MS.gene81724:CDS 40.0%
!! TGGTGTGATCATTGGTTTCT+TGG - chr1.3:43855292-43855311 None:intergenic 40.0%
AAATACACCTGTACCACCGT+AGG - chr1.3:43854121-43854140 None:intergenic 45.0%
AGGATTATTGAGATGGCGAG+TGG - chr1.3:43853613-43853632 None:intergenic 45.0%
CCCTTCTAGCCATAACATTG+AGG + chr1.3:43855361-43855380 MS.gene81724:CDS 45.0%
CTGCTTACTCCAACACAACA+TGG - chr1.3:43855398-43855417 None:intergenic 45.0%
GGTTATTGTGGAGAGCTACA+AGG - chr1.3:43855241-43855260 None:intergenic 45.0%
GTCAGTTAAAACTCTGCCGT+CGG - chr1.3:43853760-43853779 None:intergenic 45.0%
! CGTTTGAAGCCATGTTGTGT+TGG + chr1.3:43855386-43855405 MS.gene81724:CDS 45.0%
!!! AATCTCCCAACTGGTTTTCC+GGG - chr1.3:43853735-43853754 None:intergenic 45.0%
!!! GAATCTCCCAACTGGTTTTC+CGG - chr1.3:43853736-43853755 None:intergenic 45.0%
!! AGATTATAAAAATTTAAATA+AGG + chr1.3:43855439-43855458 MS.gene81724:CDS 5.0%
!!! TAAAAAAAAACATTTTTTTA+AGG + chr1.3:43853924-43853943 MS.gene81724:intron 5.0%
AACTTTGCCTACGGTGGTAC+AGG + chr1.3:43854111-43854130 MS.gene81724:CDS 50.0%
ACCTTTCCCGGAAAACCAGT+TGG + chr1.3:43853726-43853745 MS.gene81724:CDS 50.0%
AGAAATGGGGCAGCAAGTTG+AGG + chr1.3:43853587-43853606 MS.gene81724:CDS 50.0%
CATTCCAACCAGCCTGTGTT+GGG - chr1.3:43855523-43855542 None:intergenic 50.0%
CCTTATGGCATGACCTTTCC+CGG + chr1.3:43853714-43853733 MS.gene81724:CDS 50.0%
CCTTTCCCGGAAAACCAGTT+GGG + chr1.3:43853727-43853746 MS.gene81724:CDS 50.0%
GCTTGAGGAAGACAACCAAG+GGG - chr1.3:43855173-43855192 None:intergenic 50.0%
GGCTTGAGGAAGACAACCAA+GGG - chr1.3:43855174-43855193 None:intergenic 50.0%
TGGCTTGAGGAAGACAACCA+AGG - chr1.3:43855175-43855194 None:intergenic 50.0%
CCAGTTGGGAGATTCTCCGA+CGG + chr1.3:43853741-43853760 MS.gene81724:CDS 55.0%
CCGGGAAAGGTCATGCCATA+AGG - chr1.3:43853717-43853736 None:intergenic 55.0%
GAGGTTTCAGCAGTGGCTTG+AGG - chr1.3:43855188-43855207 None:intergenic 55.0%
GCATTCCAACCAGCCTGTGT+TGG - chr1.3:43855524-43855543 None:intergenic 55.0%
GGATCAGTTGCACCCAACAC+AGG + chr1.3:43855508-43855527 MS.gene81724:CDS 55.0%
GGGATGAACTTTGCCTACGG+TGG + chr1.3:43854105-43854124 MS.gene81724:CDS 55.0%
GTGGGAGGTTTACAACCCCT+TGG + chr1.3:43855155-43855174 MS.gene81724:CDS 55.0%
!!! CCCAACTGGTTTTCCGGGAA+AGG - chr1.3:43853730-43853749 None:intergenic 55.0%
CAGTTGCACCCAACACAGGC+TGG + chr1.3:43855512-43855531 MS.gene81724:CDS 60.0%
CCGTCGGAGAATCTCCCAAC+TGG - chr1.3:43853744-43853763 None:intergenic 60.0%
TGCACCCAACACAGGCTGGT+TGG + chr1.3:43855516-43855535 MS.gene81724:CDS 60.0%
!! GGAAACAGGAGGCGCTTTCC+TGG + chr1.3:43854281-43854300 MS.gene81724:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 43853316 43855592 43853316 ID=MS.gene81724
chr1.3 mRNA 43853316 43855592 43853316 ID=MS.gene81724.t1;Parent=MS.gene81724
chr1.3 exon 43853316 43853379 43853316 ID=MS.gene81724.t1.exon1;Parent=MS.gene81724.t1
chr1.3 CDS 43853316 43853379 43853316 ID=cds.MS.gene81724.t1;Parent=MS.gene81724.t1
chr1.3 exon 43853586 43853786 43853586 ID=MS.gene81724.t1.exon2;Parent=MS.gene81724.t1
chr1.3 CDS 43853586 43853786 43853586 ID=cds.MS.gene81724.t1;Parent=MS.gene81724.t1
chr1.3 exon 43854025 43854302 43854025 ID=MS.gene81724.t1.exon3;Parent=MS.gene81724.t1
chr1.3 CDS 43854025 43854302 43854025 ID=cds.MS.gene81724.t1;Parent=MS.gene81724.t1
chr1.3 exon 43855059 43855592 43855059 ID=MS.gene81724.t1.exon4;Parent=MS.gene81724.t1
chr1.3 CDS 43855059 43855592 43855059 ID=cds.MS.gene81724.t1;Parent=MS.gene81724.t1
Gene Sequence

>MS.gene81724

ATGGACTCACAAAAGCACCTTTTCATCCTCTTATGTCTTTCCCTATTACTTGTACTTCTCTCAGGTATATATTACTATGAATTTATTCAAATTTTTAGAGAAATACGTTTGTGAATTTATGATCATGAAATTTTAATACAATTTTTCATAAACATTTTAGGAAGCCATGTTAATAGTGTATTCACTTGTTTTGTCGATGACTATTAATAATCAATATATATTCAACTTTCTAAACTAATTAATTGTACATCTTATGGTTTATTGTTATAGGAGAAATGGGGCAGCAAGTTGAGGCCACTCGCCATCTCAATAATCCTTCAAAAAAATTGTTTGTTTTTGGAGATTCGTATGTTGATACTGGCAACTCCATAAAAACCATATTTGATTCATGGAAAGTACCTTATGGCATGACCTTTCCCGGAAAACCAGTTGGGAGATTCTCCGACGGCAGAGTTTTAACTGACTTCCTTGGTATGTGAATTCACTGTTCCCTCTAATAGCATCATTATCAATTGGAACAATGCATTGTTTTTTAAGTAATTTTTTGAATGGGAGTAACTTTTTTTTTTTAAAAGAAAATTTCGTATTGAAAAAACGTACTAAATTTTTAAAAAAAAACATTTTTTTAAGGATATAATGCATATTTTAGTCTTTCTTTATTAGTGTTTGCTTTCTCTTTCAATTAAGCTTCCTCTTTTATATTGTGCAGCCAAGTATTTGGGATTGAAATCACCAATCACTCACAATTTATGGAATACTAATTCAGTGCCTAAGCATGATTTGAAGTATGGGATGAACTTTGCCTACGGTGGTACAGGTGTATTTGAAGTATCTTCTATAGGCCCAAATGTGACCCAAATCAATTCCTTAATCAAGCTCATTCAAGAAAATGTCTACACTCCCTCAGATATCACCAAATCTATAGCTTATGTCTCTGTTGCTGGAAATGACTACAATTATTATTTGGAAACAGGAGGCGCTTTCCTGGTAAATTATTTAATTTAATCATCATATTTATTTTCTCTATTTCTTGGATGTATAATATGAGACTCAATAGTTAAAATATTACGATGATAATGATAATTAATATATATTCCTACCGTCTCTAATTGTAAGACCATTTACAAAAAAAAAGTTGTCTTCCTTAAAAAATAAAATTGTCTCTACATATAAGACTATTTACAAATTTTTAGACGCATTTATCACTCTTTTTTTCAAGTGTAGCCCTTATTAATATATTATCAATGTATCTTGAAATATTAAAAGTTAACAAATAAATATATCTATATACAAGGGACACCCGTGATTACTCCAACAAATTTATTAAAAGTTAACAATAAATATATTTATACACCCGTGATTTTTGTAAATTAATCTTTTAAAAAGGGACGGAGGGAACAAATAATTTTTCAATTATTATTGCATAACATTAGCACAATATTTCAAAGTTATAAAGATAAAGCATTCCTATGTAACAATTGTGATAGATAGAAGATAAATTACAAGTTAGGAAAAATGTATTTTTGAAAATTTAAAAAAAAAATATTGCATTTTCAAAATTGTAGATCTAAAGATGAAAACCAAAACGGAAAATAGAAAGAATCCAAGTATATGATAATAGAAACATACTAAAAAAACATAAATCCATAGTTTAGAAGGGTTTCTAAAAAAATTAAAATTGCACTCATTTTTTATATATTTATAAATGAATGTTAACAAAATAATTTCATTGAATAAACGCAGGGTTTCCCATCTTTCCCATCATTCATTGAATCAGTGATTGAACAAACAACCACCAATTTGATTCATCTTCAAAGCTTAGGATTTGAGAGAATTGTTGTGGGAGGTTTACAACCCCTTGGTTGTCTTCCTCAAGCCACTGCTGAAACCTCATTTCAAAGTTGCAATAGTACATTTAATGACCTTGTAGCTCTCCACAATAACCTATTGAACCAATCTGTTACAAAGTTGAACCAAGAAACCAATGATCACACCACATTCACAATTCTTGACATTTTCGATAGTTTCAGGTCAGTGTTGAATCACCCTTCTAGCCATAACATTGAGGAACGTTTGAAGCCATGTTGTGTTGGAGTAAGCAGTGAGTATAAGTGTGGAAGTGTAGATTATAAAAATTTAAATAAGGTTAAGAAATATTTGGTTTGTGAAAATCCTGAATCAACTTTCTTTTGGGATCAGTTGCACCCAACACAGGCTGGTTGGAATGCTGTGTATAATGAGTTAGAGAAGAAAGATCTTTATCAAATTTTGTATTAG
Protein sequence

>MS.gene81724.t1

MDSQKHLFILLCLSLLLVLLSGEMGQQVEATRHLNNPSKKLFVFGDSYVDTGNSIKTIFDSWKVPYGMTFPGKPVGRFSDGRVLTDFLAKYLGLKSPITHNLWNTNSVPKHDLKYGMNFAYGGTGVFEVSSIGPNVTQINSLIKLIQENVYTPSDITKSIAYVSVAGNDYNYYLETGGAFLGFPSFPSFIESVIEQTTTNLIHLQSLGFERIVVGGLQPLGCLPQATAETSFQSCNSTFNDLVALHNNLLNQSVTKLNQETNDHTTFTILDIFDSFRSVLNHPSSHNIEERLKPCCVGVSSEYKCGSVDYKNLNKVKKYLVCENPESTFFWDQLHPTQAGWNAVYNELEKKDLYQILY