AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene82340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82340.t1 MTR_4g082580 94.720 322 14 1 1 319 67 388 0.0 630
MS.gene82340.t1 MTR_5g042920 61.610 323 72 11 44 319 115 432 1.62e-120 353
MS.gene82340.t1 MTR_7g011820 45.692 383 135 9 7 319 140 519 3.01e-96 294
MS.gene82340.t1 MTR_3g056100 53.659 246 80 7 71 286 91 332 7.89e-80 249
MS.gene82340.t1 MTR_3g056100 53.659 246 80 7 71 286 235 476 5.74e-79 251
MS.gene82340.t1 MTR_5g094430 50.198 253 93 4 61 281 48 299 4.15e-78 244
MS.gene82340.t1 MTR_5g094430 50.198 253 93 4 61 281 70 321 7.29e-78 244
MS.gene82340.t1 MTR_3g056100 50.965 259 80 7 71 286 91 345 9.45e-78 244
MS.gene82340.t1 MTR_3g056100 43.434 99 46 4 212 303 99 194 5.33e-15 75.5
MS.gene82340.t1 MTR_7g071120 44.479 326 120 8 15 309 117 412 3.06e-77 244
MS.gene82340.t1 MTR_5g094430 50.198 253 93 4 61 281 182 433 4.09e-77 245
MS.gene82340.t1 MTR_3g056100 50.965 259 80 7 71 286 235 489 6.92e-77 246
MS.gene82340.t1 MTR_3g056100 43.434 99 46 4 212 303 243 338 5.26e-15 75.9
MS.gene82340.t1 MTR_3g031220 50.847 236 80 5 74 274 193 427 1.27e-73 235
MS.gene82340.t1 MTR_4g013260 51.376 218 87 4 76 274 181 398 2.01e-71 229
MS.gene82340.t1 MTR_5g074400 49.020 255 79 7 74 280 238 489 1.37e-69 227
MS.gene82340.t1 MTR_7g100510 45.174 259 101 4 70 288 180 437 1.72e-67 218
MS.gene82340.t1 MTR_7g080000 44.061 261 79 4 80 274 235 494 1.33e-61 208
MS.gene82340.t1 MTR_7g080000 41.905 105 45 3 211 306 233 330 3.29e-15 76.6
MS.gene82340.t1 MTR_7g080000 55.000 60 27 0 79 138 432 491 5.18e-13 70.1
MS.gene82340.t1 MTR_3g031220 45.361 194 70 5 74 232 193 385 7.33e-48 165
MS.gene82340.t1 MTR_3g031220 56.452 62 26 1 212 273 198 258 4.58e-15 75.5
MS.gene82340.t1 MTR_4g130900 37.224 317 148 10 7 274 107 421 2.44e-47 166
MS.gene82340.t1 MTR_4g130900 45.455 77 39 1 66 142 349 422 4.43e-13 70.1
MS.gene82340.t1 MTR_5g097490 39.167 240 115 5 71 281 84 321 6.35e-47 162
MS.gene82340.t1 MTR_3g009470 52.941 153 62 2 158 301 433 584 1.44e-42 156
MS.gene82340.t1 MTR_3g009470 60.241 83 30 2 62 142 261 342 5.78e-24 102
MS.gene82340.t1 MTR_3g009470 60.000 60 23 1 212 271 280 338 1.84e-14 74.3
MS.gene82340.t1 MTR_3g009470 53.425 73 32 1 79 149 495 567 3.39e-14 73.6
MS.gene82340.t1 MTR_1g077780 55.469 128 53 2 158 281 4 131 1.72e-42 144
MS.gene82340.t1 MTR_1g077780 44.444 81 44 1 58 138 42 121 9.00e-14 68.2
MS.gene82340.t1 MTR_7g080020 55.224 134 51 2 145 278 435 559 6.98e-41 152
MS.gene82340.t1 MTR_7g080020 68.657 67 20 1 76 142 277 342 5.35e-24 102
MS.gene82340.t1 MTR_7g080020 41.121 107 50 3 212 306 280 385 6.65e-16 79.0
MS.gene82340.t1 MTR_5g097500 33.333 219 130 4 80 283 84 301 6.35e-31 118
MS.gene82340.t1 MTR_5g097500 35.526 76 49 0 79 154 230 305 4.36e-12 66.2
MS.gene82340.t1 MTR_4g094588 51.429 105 51 0 169 273 135 239 9.82e-30 116
MS.gene82340.t1 MTR_4g094588 47.222 72 36 1 79 150 178 247 3.37e-14 72.8
MS.gene82340.t1 MTR_1g086790 54.255 94 43 0 178 271 124 217 6.52e-29 113
MS.gene82340.t1 MTR_1g086790 53.125 64 30 0 79 142 158 221 1.74e-16 79.3
MS.gene82340.t1 MTR_7g109800 62.025 79 30 0 199 277 132 210 9.78e-29 112
MS.gene82340.t1 MTR_7g109800 42.708 96 54 1 43 138 110 204 1.34e-15 76.3
MS.gene82340.t1 MTR_8g007270 57.647 85 35 1 193 277 135 218 2.85e-28 109
MS.gene82340.t1 MTR_8g007270 56.140 57 25 0 79 135 154 210 3.54e-14 71.2
MS.gene82340.t1 MTR_5g091390 61.842 76 29 0 198 273 143 218 6.08e-28 110
MS.gene82340.t1 MTR_5g091390 51.667 60 29 0 79 138 157 216 1.77e-14 73.2
MS.gene82340.t1 MTR_3g095080 59.459 74 30 0 195 268 127 200 1.09e-27 107
MS.gene82340.t1 MTR_3g095080 54.386 57 26 0 79 135 144 200 3.43e-14 70.9
MS.gene82340.t1 MTR_3g095080 59.459 74 30 0 195 268 151 224 1.24e-27 108
MS.gene82340.t1 MTR_3g095080 54.386 57 26 0 79 135 168 224 2.87e-14 71.6
MS.gene82340.t1 MTR_7g028415 55.556 81 36 0 202 282 83 163 1.18e-26 103
MS.gene82340.t1 MTR_7g028415 57.895 57 24 0 79 135 93 149 9.61e-16 74.3
MS.gene82340.t1 MTR_7g028710 55.556 81 36 0 202 282 83 163 1.18e-26 103
MS.gene82340.t1 MTR_7g028710 57.895 57 24 0 79 135 93 149 9.61e-16 74.3
MS.gene82340.t1 MTR_2g033820 60.526 76 30 0 197 272 188 263 1.58e-26 108
MS.gene82340.t1 MTR_2g033820 54.688 64 29 0 79 142 203 266 5.27e-17 81.3
MS.gene82340.t1 MTR_8g092140 52.747 91 38 2 195 280 142 232 1.86e-26 104
MS.gene82340.t1 MTR_8g092140 51.471 68 32 1 68 135 150 216 1.49e-15 75.1
MS.gene82340.t1 MTR_7g079010 53.261 92 43 0 177 268 106 197 4.41e-26 103
MS.gene82340.t1 MTR_7g079010 53.226 62 29 0 74 135 136 197 7.30e-16 75.5
MS.gene82340.t1 MTR_8g096730 44.231 104 58 0 180 283 38 141 5.34e-26 101
MS.gene82340.t1 MTR_8g096730 54.386 57 26 0 79 135 70 126 5.40e-16 74.3
MS.gene82340.t1 MTR_5g043880 59.459 74 30 0 195 268 107 180 1.63e-25 103
MS.gene82340.t1 MTR_5g043880 44.872 78 40 1 79 153 124 201 4.01e-15 74.7
MS.gene82340.t1 MTR_8g092010 45.098 102 43 1 170 271 79 167 2.02e-25 100
MS.gene82340.t1 MTR_8g092010 49.206 63 32 0 79 141 108 170 4.19e-12 64.3
MS.gene82340.t1 MTR_3g009470 60.976 82 29 2 63 142 262 342 5.24e-24 102
MS.gene82340.t1 MTR_3g009470 60.714 56 21 1 177 232 461 515 2.60e-15 76.6
MS.gene82340.t1 MTR_3g009470 60.000 60 23 1 212 271 280 338 2.01e-14 73.9
MS.gene82340.t1 MTR_3g104750 55.714 70 31 0 199 268 91 160 5.28e-24 96.3
MS.gene82340.t1 MTR_3g104750 49.123 57 29 0 79 135 104 160 1.71e-12 65.1
MS.gene82340.t1 MTR_4g122530 56.757 74 32 0 199 272 195 268 1.79e-23 100
MS.gene82340.t1 MTR_4g122530 55.000 60 27 0 79 138 208 267 1.18e-16 80.5
MS.gene82340.t1 MTR_3g095040 52.000 75 36 0 198 272 104 178 5.60e-23 94.7
MS.gene82340.t1 MTR_3g095040 36.364 143 68 3 41 160 62 204 2.59e-15 73.9
MS.gene82340.t1 MTR_1g009613 50.505 99 37 3 176 273 237 324 5.65e-23 97.8
MS.gene82340.t1 MTR_7g110720 39.552 134 67 3 143 275 160 280 6.77e-23 98.6
MS.gene82340.t1 MTR_1g015140 52.778 72 34 0 197 268 87 158 7.82e-23 93.2
MS.gene82340.t1 MTR_1g015140 50.877 57 28 0 79 135 102 158 2.75e-13 67.0
MS.gene82340.t1 MTR_6g086555 56.000 75 32 1 198 271 192 266 7.89e-23 98.2
MS.gene82340.t1 MTR_6g086555 45.833 72 37 2 72 142 200 270 5.74e-13 69.3
MS.gene82340.t1 MTR_7g110720 46.809 94 49 1 183 275 160 253 9.66e-23 97.8
MS.gene82340.t1 MTR_1g078260 49.462 93 46 1 199 290 234 326 2.06e-22 97.4
MS.gene82340.t1 MTR_1g078260 42.857 77 38 2 79 149 247 323 2.57e-11 64.7
MS.gene82340.t1 MTR_4g049790 49.383 81 40 1 194 273 294 374 2.59e-22 97.8
MS.gene82340.t1 MTR_4g049790 33.588 131 65 4 55 164 270 399 1.87e-11 65.1
MS.gene82340.t1 MTR_3g053330 47.561 82 42 1 191 271 230 311 5.02e-22 96.3
MS.gene82340.t1 MTR_3g053330 42.500 80 43 2 80 156 252 331 1.41e-11 65.5
MS.gene82340.t1 MTR_2g023930 50.633 79 38 1 194 271 287 365 5.66e-22 96.7
MS.gene82340.t1 MTR_4g132430 49.383 81 40 1 194 273 109 189 5.66e-22 95.1
MS.gene82340.t1 MTR_4g132430 46.316 95 44 2 186 273 229 323 1.68e-21 95.1
MS.gene82340.t1 MTR_2g088000 49.383 81 40 1 194 273 331 411 2.07e-21 95.1
MS.gene82340.t1 MTR_2g088000 40.741 81 45 2 79 156 349 429 1.56e-11 65.5
MS.gene82340.t1 MTR_4g107970 51.316 76 36 1 197 271 163 238 3.11e-21 94.4
MS.gene82340.t1 MTR_4g107970 49.180 61 30 1 79 138 178 238 3.35e-11 64.3
MS.gene82340.t1 MTR_4g107970 51.316 76 36 1 197 271 240 315 4.01e-21 94.4
MS.gene82340.t1 MTR_4g107970 49.180 61 30 1 79 138 255 315 4.43e-11 63.9
MS.gene82340.t1 MTR_4g094412 50.000 78 38 1 197 273 228 305 5.09e-21 93.6
MS.gene82340.t1 MTR_4g094412 50.000 78 38 1 197 273 219 296 5.30e-21 93.6
MS.gene82340.t1 MTR_2g045360 43.617 94 52 1 197 289 196 289 2.36e-20 91.3
MS.gene82340.t1 MTR_7g009730 41.228 114 63 3 159 268 163 276 3.26e-20 91.7
MS.gene82340.t1 MTR_4g127040 47.312 93 37 3 177 268 221 302 5.45e-20 89.0
MS.gene82340.t1 MTR_5g016610 52.000 75 35 1 209 282 196 270 8.16e-20 87.8
MS.gene82340.t1 MTR_2g105060 43.689 103 42 3 197 283 64 166 8.55e-20 87.0
MS.gene82340.t1 MTR_2g105060 50.000 68 33 1 80 146 95 162 9.38e-14 70.1
MS.gene82340.t1 MTR_3g106060 54.795 73 30 3 199 268 123 195 1.12e-19 87.8
MS.gene82340.t1 MTR_3g106060 47.222 72 36 2 80 149 139 210 2.89e-12 66.6
MS.gene82340.t1 MTR_4g094908 46.739 92 45 2 193 283 250 338 1.13e-19 88.6
MS.gene82340.t1 MTR_2g105060 43.689 103 42 3 197 283 139 241 1.56e-19 87.8
MS.gene82340.t1 MTR_2g105060 50.000 68 33 1 80 146 170 237 1.24e-13 70.9
MS.gene82340.t1 MTR_7g109600 52.055 73 34 1 210 281 51 123 1.58e-19 86.7
MS.gene82340.t1 MTR_7g109600 39.535 86 44 3 73 152 42 125 5.77e-12 65.5
MS.gene82340.t1 MTR_4g049760 47.500 80 41 1 194 272 272 351 2.77e-19 88.6
MS.gene82340.t1 MTR_7g062220 59.322 59 24 0 210 268 122 180 2.83e-19 87.0
MS.gene82340.t1 MTR_7g062220 54.386 57 26 0 79 135 124 180 1.49e-14 73.6
MS.gene82340.t1 MTR_5g074200 45.098 102 49 3 79 174 220 320 5.45e-19 86.3
MS.gene82340.t1 MTR_5g074200 46.914 81 41 2 212 292 220 298 1.94e-14 73.2
MS.gene82340.t1 MTR_1g070455 46.591 88 45 2 192 277 273 360 6.56e-19 86.7
MS.gene82340.t1 MTR_1g013760 46.341 82 38 3 193 268 116 197 3.48e-18 83.6
MS.gene82340.t1 MTR_1g013760 47.368 57 29 1 80 135 141 197 9.99e-11 62.0
MS.gene82340.t1 MTR_8g087000 51.515 66 31 1 213 277 78 143 4.44e-18 82.4
MS.gene82340.t1 MTR_8g087000 51.515 66 31 1 213 277 77 142 4.97e-18 82.4
MS.gene82340.t1 MTR_2g032030 42.718 103 48 3 175 274 236 330 5.18e-18 84.7
MS.gene82340.t1 MTR_2g032030 41.584 101 52 2 175 274 236 330 7.09e-18 84.0
MS.gene82340.t1 MTR_2g016770 49.412 85 40 3 213 296 36 118 9.22e-18 80.9
MS.gene82340.t1 MTR_2g016770 38.000 100 52 4 73 166 26 121 1.43e-11 63.5
MS.gene82340.t1 MTR_2g016770 49.412 85 40 3 213 296 28 110 1.04e-17 80.5
MS.gene82340.t1 MTR_2g016770 38.000 100 52 4 73 166 18 113 1.64e-11 63.2
MS.gene82340.t1 MTR_2g083870 51.389 72 32 2 213 283 81 150 4.08e-17 80.1
MS.gene82340.t1 MTR_8g098945 43.617 94 44 3 211 295 128 221 4.65e-17 80.1
MS.gene82340.t1 MTR_8g098945 45.455 66 35 1 74 138 124 189 3.53e-12 66.2
MS.gene82340.t1 MTR_4g007060 52.174 69 31 2 205 271 120 188 4.87e-17 80.1
MS.gene82340.t1 MTR_4g007060 44.000 75 39 2 80 153 129 201 5.87e-12 65.5
MS.gene82340.t1 MTR_1g099600 48.649 74 36 2 199 271 173 245 5.60e-17 80.5
MS.gene82340.t1 MTR_1g099600 41.176 68 39 1 72 138 178 245 2.65e-12 67.0
MS.gene82340.t1 MTR_4g047580 29.861 144 94 3 131 273 206 343 5.61e-17 81.6
MS.gene82340.t1 MTR_4g007060 52.174 69 31 2 205 271 154 222 7.37e-17 80.1
MS.gene82340.t1 MTR_4g007060 50.000 60 29 1 80 138 163 222 7.58e-12 65.5
MS.gene82340.t1 MTR_7g079040 53.030 66 30 1 210 274 152 217 1.47e-16 79.3
MS.gene82340.t1 MTR_7g079040 41.333 75 43 1 65 138 140 214 1.21e-11 65.1
MS.gene82340.t1 MTR_8g028565 44.706 85 43 2 210 293 153 234 3.16e-16 78.6
MS.gene82340.t1 MTR_8g028565 43.056 72 40 1 68 138 144 215 1.92e-12 67.4
MS.gene82340.t1 MTR_2g024350 49.275 69 34 1 209 276 5 73 7.00e-16 75.9
MS.gene82340.t1 MTR_2g024350 39.796 98 47 3 75 169 4 92 3.10e-11 62.8
MS.gene82340.t1 MTR_1g013790 40.698 86 47 3 190 271 76 161 1.58e-15 75.5
MS.gene82340.t1 MTR_1g013790 42.045 88 45 3 80 161 102 189 6.07e-11 62.4
MS.gene82340.t1 MTR_8g067635 37.615 109 61 2 212 313 349 457 1.59e-15 77.4
MS.gene82340.t1 MTR_8g067635 42.647 68 38 1 72 138 342 409 6.43e-11 63.5
MS.gene82340.t1 MTR_2g075750 34.259 108 68 1 190 294 6 113 2.01e-15 73.6
MS.gene82340.t1 MTR_8g067650 43.023 86 42 2 212 290 339 424 4.40e-15 76.3
MS.gene82340.t1 MTR_8g067650 42.857 70 39 1 70 138 330 399 1.59e-11 65.5
MS.gene82340.t1 MTR_2g024380 49.275 69 34 1 209 276 248 316 5.67e-15 75.5
MS.gene82340.t1 MTR_2g075610 39.773 88 50 1 210 294 27 114 3.84e-14 70.1
MS.gene82340.t1 MTR_0117s0040 44.156 77 40 2 193 268 57 131 3.92e-14 71.2
MS.gene82340.t1 MTR_8g027860 50.000 58 26 1 79 133 136 193 8.61e-14 71.6
MS.gene82340.t1 MTR_8g027860 44.068 59 30 1 211 266 135 193 8.60e-11 62.4
MS.gene82340.t1 MTR_3g108960 47.619 63 32 1 208 269 310 372 9.72e-14 71.6
MS.gene82340.t1 MTR_3g090860 51.724 58 25 1 79 133 133 190 9.98e-14 71.2
MS.gene82340.t1 MTR_3g090860 49.153 59 27 1 211 266 132 190 6.48e-12 65.9
MS.gene82340.t1 MTR_8g069935 36.792 106 54 2 173 277 304 397 1.19e-13 71.6
MS.gene82340.t1 MTR_7g117200 44.928 69 33 2 79 142 118 186 2.60e-13 70.1
MS.gene82340.t1 MTR_7g117200 42.254 71 38 1 199 266 105 175 7.16e-11 62.8
MS.gene82340.t1 MTR_8g099350 43.056 72 38 1 65 133 118 189 2.61e-13 70.1
MS.gene82340.t1 MTR_8g099350 53.448 58 24 1 212 266 132 189 2.58e-12 67.4
MS.gene82340.t1 MTR_6g053200 42.647 68 38 1 210 276 328 395 8.08e-13 69.3
MS.gene82340.t1 MTR_5g067680 36.170 94 49 2 73 155 196 289 1.31e-12 68.2
MS.gene82340.t1 MTR_5g067680 48.276 58 27 1 212 266 202 259 2.65e-11 64.3
MS.gene82340.t1 MTR_2g075680 38.462 104 58 3 166 266 105 205 1.97e-12 67.0
MS.gene82340.t1 MTR_5g044695 51.111 45 22 0 194 238 59 103 4.33e-12 62.4
MS.gene82340.t1 MTR_1g077760 52.083 48 23 0 185 232 87 134 2.85e-11 60.8
MS.gene82340.t1 MTR_7g073430 48.276 58 27 1 212 266 122 179 4.70e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82340.t1 AT2G03340 51.630 368 108 12 7 319 160 512 2.03e-104 315
MS.gene82340.t1 AT1G13960 48.919 370 117 9 7 318 4 359 3.12e-96 289
MS.gene82340.t1 AT1G13960 49.459 370 115 10 7 318 157 512 3.93e-95 291
MS.gene82340.t1 AT3G01080 51.493 268 98 6 75 319 163 421 1.30e-78 246
MS.gene82340.t1 AT3G01080 51.493 268 98 6 75 319 201 459 1.54e-78 247
MS.gene82340.t1 AT5G07100 53.589 209 81 2 66 274 11 203 3.44e-74 228
MS.gene82340.t1 AT5G07100 56.250 64 28 0 79 142 141 204 1.40e-15 74.7
MS.gene82340.t1 AT5G07100 47.143 70 37 0 212 281 24 93 5.14e-14 70.5
MS.gene82340.t1 AT5G07100 53.589 209 81 2 66 274 11 203 3.44e-74 228
MS.gene82340.t1 AT5G07100 56.250 64 28 0 79 142 141 204 1.40e-15 74.7
MS.gene82340.t1 AT5G07100 47.143 70 37 0 212 281 24 93 5.14e-14 70.5
MS.gene82340.t1 AT5G07100 53.589 209 81 2 66 274 11 203 3.44e-74 228
MS.gene82340.t1 AT5G07100 56.250 64 28 0 79 142 141 204 1.40e-15 74.7
MS.gene82340.t1 AT5G07100 47.143 70 37 0 212 281 24 93 5.14e-14 70.5
MS.gene82340.t1 AT5G07100 53.589 209 81 2 66 274 11 203 3.44e-74 228
MS.gene82340.t1 AT5G07100 56.250 64 28 0 79 142 141 204 1.40e-15 74.7
MS.gene82340.t1 AT5G07100 47.143 70 37 0 212 281 24 93 5.14e-14 70.5
MS.gene82340.t1 AT5G07100 43.750 288 127 5 2 274 29 296 4.95e-74 230
MS.gene82340.t1 AT5G07100 48.750 80 40 1 63 142 219 297 1.82e-15 76.3
MS.gene82340.t1 AT5G07100 38.947 95 47 1 198 281 92 186 2.93e-14 72.8
MS.gene82340.t1 AT4G26640 44.891 274 102 6 50 277 104 374 3.70e-71 228
MS.gene82340.t1 AT4G26640 51.351 74 34 2 210 282 137 209 2.30e-15 77.0
MS.gene82340.t1 AT4G26640 44.891 274 102 6 50 277 136 406 5.77e-71 229
MS.gene82340.t1 AT4G26640 51.351 74 34 2 210 282 169 241 2.40e-15 77.0
MS.gene82340.t1 AT4G26640 44.689 273 102 6 51 277 1 270 5.96e-71 225
MS.gene82340.t1 AT4G26640 51.351 74 34 2 210 282 33 105 2.33e-15 76.6
MS.gene82340.t1 AT4G26640 44.689 273 102 6 51 277 1 270 5.96e-71 225
MS.gene82340.t1 AT4G26640 51.351 74 34 2 210 282 33 105 2.33e-15 76.6
MS.gene82340.t1 AT4G26640 44.689 273 102 6 51 277 1 270 5.96e-71 225
MS.gene82340.t1 AT4G26640 51.351 74 34 2 210 282 33 105 2.33e-15 76.6
MS.gene82340.t1 AT4G26640 44.689 273 102 6 51 277 1 270 5.96e-71 225
MS.gene82340.t1 AT4G26640 51.351 74 34 2 210 282 33 105 2.33e-15 76.6
MS.gene82340.t1 AT4G26640 44.891 274 102 6 50 277 176 446 1.28e-70 229
MS.gene82340.t1 AT4G26640 51.351 74 34 2 210 282 209 281 2.44e-15 77.0
MS.gene82340.t1 AT2G38470 48.659 261 85 7 76 288 181 440 1.97e-68 222
MS.gene82340.t1 AT2G30250 41.176 289 133 7 21 273 102 389 4.14e-61 200
MS.gene82340.t1 AT2G04880 41.700 247 99 6 75 279 107 350 1.04e-56 190
MS.gene82340.t1 AT2G04880 50.725 69 34 0 79 147 283 351 4.88e-16 79.0
MS.gene82340.t1 AT4G30935 38.079 302 135 9 16 274 101 393 8.54e-48 167
MS.gene82340.t1 AT4G30935 43.820 89 45 1 59 142 306 394 1.07e-12 68.9
MS.gene82340.t1 AT5G56270 72.449 98 27 0 177 274 452 549 6.17e-44 160
MS.gene82340.t1 AT5G56270 67.188 64 20 1 79 142 273 335 1.32e-22 99.0
MS.gene82340.t1 AT5G56270 61.667 60 22 1 212 271 273 331 1.76e-16 80.5
MS.gene82340.t1 AT5G56270 58.333 60 25 0 79 138 487 546 1.78e-14 74.3
MS.gene82340.t1 AT4G12020 39.405 269 113 7 7 232 400 661 1.03e-41 154
MS.gene82340.t1 AT4G12020 52.542 59 27 1 213 271 469 526 2.04e-12 68.6
MS.gene82340.t1 AT4G12020 38.971 272 110 8 7 232 400 661 1.24e-41 154
MS.gene82340.t1 AT4G12020 52.542 59 27 1 213 271 469 526 1.58e-12 68.9
MS.gene82340.t1 AT4G12020 38.971 272 110 8 7 232 400 661 1.25e-41 154
MS.gene82340.t1 AT4G12020 52.542 59 27 1 213 271 469 526 1.64e-12 68.9
MS.gene82340.t1 AT4G12020 38.971 272 110 8 7 232 400 661 1.28e-41 154
MS.gene82340.t1 AT4G12020 52.542 59 27 1 213 271 469 526 1.58e-12 68.9
MS.gene82340.t1 AT4G12020 38.971 272 110 8 7 232 400 661 1.33e-41 154
MS.gene82340.t1 AT4G12020 52.542 59 27 1 213 271 469 526 1.51e-12 68.9
MS.gene82340.t1 AT4G12020 38.971 272 110 8 7 232 400 661 1.33e-41 154
MS.gene82340.t1 AT4G12020 52.542 59 27 1 213 271 469 526 1.51e-12 68.9
MS.gene82340.t1 AT4G12020 38.971 272 110 8 7 232 400 661 1.40e-41 154
MS.gene82340.t1 AT4G12020 52.542 59 27 1 213 271 469 526 1.61e-12 68.9
MS.gene82340.t1 AT4G12020 38.971 272 110 8 7 232 400 661 1.41e-41 154
MS.gene82340.t1 AT4G12020 52.542 59 27 1 213 271 469 526 1.60e-12 68.9
MS.gene82340.t1 AT4G12020 38.971 272 110 8 7 232 400 661 1.41e-41 154
MS.gene82340.t1 AT4G12020 52.542 59 27 1 213 271 469 526 1.60e-12 68.9
MS.gene82340.t1 AT4G12020 38.971 272 110 8 7 232 400 661 1.45e-41 154
MS.gene82340.t1 AT4G12020 52.542 59 27 1 213 271 469 526 1.64e-12 68.9
MS.gene82340.t1 AT4G12020 38.971 272 110 8 7 232 333 594 1.75e-41 154
MS.gene82340.t1 AT4G12020 52.542 59 27 1 213 271 402 459 1.87e-12 68.6
MS.gene82340.t1 AT4G26440 62.500 112 41 1 177 288 337 447 4.67e-40 147
MS.gene82340.t1 AT4G26440 63.380 71 25 1 79 149 178 247 3.57e-24 103
MS.gene82340.t1 AT4G26440 43.678 87 48 1 212 298 178 263 4.03e-15 76.3
MS.gene82340.t1 AT4G26440 51.899 79 34 1 79 157 372 446 4.52e-14 73.2
MS.gene82340.t1 AT2G04880 53.390 118 50 4 164 279 260 374 1.95e-33 128
MS.gene82340.t1 AT2G04880 46.154 91 48 1 75 165 107 196 5.46e-19 87.8
MS.gene82340.t1 AT2G04880 54.688 64 28 1 210 273 109 171 2.13e-16 80.1
MS.gene82340.t1 AT2G04880 45.652 92 48 2 56 147 286 375 5.39e-16 79.0
MS.gene82340.t1 AT4G18170 65.333 75 26 0 197 271 157 231 9.65e-30 115
MS.gene82340.t1 AT4G18170 52.308 65 29 1 79 143 172 234 8.54e-14 71.2
MS.gene82340.t1 AT1G29860 64.000 75 27 0 199 273 123 197 1.30e-29 114
MS.gene82340.t1 AT1G29860 52.308 65 29 1 79 143 136 198 6.64e-14 71.2
MS.gene82340.t1 AT2G37260 48.092 131 55 2 156 284 220 339 1.88e-29 115
MS.gene82340.t1 AT2G37260 68.750 64 19 1 75 138 79 141 9.07e-24 100
MS.gene82340.t1 AT2G37260 57.377 61 25 1 213 273 84 143 7.67e-15 74.7
MS.gene82340.t1 AT2G37260 49.123 57 29 0 79 135 267 323 1.49e-11 65.1
MS.gene82340.t1 AT2G37260 48.092 131 55 2 156 284 222 341 1.97e-29 115
MS.gene82340.t1 AT2G37260 68.750 64 19 1 75 138 81 143 9.32e-24 100
MS.gene82340.t1 AT2G37260 57.377 61 25 1 213 273 86 145 7.48e-15 74.7
MS.gene82340.t1 AT2G37260 49.123 57 29 0 79 135 269 325 1.46e-11 65.1
MS.gene82340.t1 AT2G37260 48.092 131 55 2 156 284 302 421 5.06e-29 115
MS.gene82340.t1 AT2G37260 68.750 64 19 1 75 138 161 223 1.64e-23 100
MS.gene82340.t1 AT2G37260 57.377 61 25 1 213 273 166 225 8.90e-15 75.1
MS.gene82340.t1 AT2G37260 49.123 57 29 0 79 135 349 405 1.73e-11 65.1
MS.gene82340.t1 AT5G46350 61.039 77 30 0 198 274 169 245 2.02e-28 112
MS.gene82340.t1 AT5G46350 44.578 83 38 2 79 161 183 257 5.63e-13 68.9
MS.gene82340.t1 AT2G44745 51.579 95 45 1 183 277 116 209 2.41e-28 109
MS.gene82340.t1 AT2G44745 56.140 57 25 0 79 135 145 201 2.52e-14 71.2
MS.gene82340.t1 AT5G49520 64.384 73 26 0 199 271 208 280 6.08e-28 112
MS.gene82340.t1 AT5G49520 46.053 76 40 1 63 138 206 280 2.12e-15 76.6
MS.gene82340.t1 AT5G13080 52.381 84 40 0 199 282 54 137 8.62e-28 105
MS.gene82340.t1 AT5G13080 57.895 57 24 0 79 135 67 123 3.78e-16 74.7
MS.gene82340.t1 AT1G64000 57.317 82 35 0 187 268 89 170 2.08e-27 106
MS.gene82340.t1 AT1G64000 52.459 61 29 0 75 135 110 170 9.04e-14 69.3
MS.gene82340.t1 AT1G69310 58.974 78 32 0 191 268 126 203 2.27e-27 108
MS.gene82340.t1 AT1G69310 55.172 58 26 0 79 136 147 204 3.14e-16 77.8
MS.gene82340.t1 AT1G69310 58.974 78 32 0 191 268 126 203 2.27e-27 108
MS.gene82340.t1 AT1G69310 55.172 58 26 0 79 136 147 204 3.14e-16 77.8
MS.gene82340.t1 AT1G69310 58.974 78 32 0 191 268 126 203 2.27e-27 108
MS.gene82340.t1 AT1G69310 55.172 58 26 0 79 136 147 204 3.14e-16 77.8
MS.gene82340.t1 AT2G47260 63.014 73 27 0 199 271 161 233 3.42e-27 109
MS.gene82340.t1 AT2G47260 53.125 64 30 0 79 142 174 237 2.18e-15 76.3
MS.gene82340.t1 AT4G39410 59.211 76 31 0 193 268 204 279 4.48e-27 108
MS.gene82340.t1 AT4G39410 54.386 57 26 0 79 135 223 279 3.48e-14 72.4
MS.gene82340.t1 AT3G01970 54.762 84 38 0 199 282 52 135 1.06e-26 103
MS.gene82340.t1 AT3G01970 55.556 63 28 0 79 141 65 127 1.18e-15 73.6
MS.gene82340.t1 AT5G41570 60.526 76 30 0 193 268 79 154 1.12e-26 103
MS.gene82340.t1 AT5G41570 52.459 61 29 0 75 135 94 154 1.55e-13 68.2
MS.gene82340.t1 AT3G01080 70.769 65 18 1 75 139 201 264 3.23e-26 106
MS.gene82340.t1 AT3G01080 56.667 60 25 1 212 271 205 263 9.71e-15 74.3
MS.gene82340.t1 AT4G04450 44.915 118 59 3 183 297 169 283 7.02e-26 107
MS.gene82340.t1 AT4G04450 38.202 89 50 3 80 164 199 286 1.22e-11 65.5
MS.gene82340.t1 AT2G46130 56.579 76 33 0 193 268 11 86 1.18e-25 99.0
MS.gene82340.t1 AT2G46130 50.877 57 28 0 79 135 30 86 3.40e-13 65.5
MS.gene82340.t1 AT1G55600 61.728 81 31 0 193 273 288 368 1.87e-25 106
MS.gene82340.t1 AT1G55600 46.667 75 39 1 64 138 293 366 5.52e-12 66.6
MS.gene82340.t1 AT4G04450 44.915 118 59 3 183 297 263 377 1.94e-25 106
MS.gene82340.t1 AT4G04450 38.202 89 50 3 80 164 293 380 2.13e-11 65.1
MS.gene82340.t1 AT3G62340 42.857 119 62 1 198 310 104 222 6.88e-25 101
MS.gene82340.t1 AT3G62340 55.000 60 27 0 79 138 118 177 7.56e-15 73.9
MS.gene82340.t1 AT5G26170 55.714 70 31 0 199 268 100 169 7.23e-25 99.0
MS.gene82340.t1 AT5G26170 50.877 57 28 0 79 135 113 169 1.05e-12 65.9
MS.gene82340.t1 AT2G21900 44.681 94 46 2 201 288 95 188 2.45e-23 95.9
MS.gene82340.t1 AT2G21900 47.826 69 36 0 70 138 100 168 4.35e-15 73.2
MS.gene82340.t1 AT1G68150 45.000 100 54 1 197 295 220 319 9.64e-23 97.4
MS.gene82340.t1 AT5G15130 46.809 94 46 2 195 287 168 258 1.21e-22 98.6
MS.gene82340.t1 AT5G15130 47.541 61 31 1 79 138 185 245 8.47e-11 63.2
MS.gene82340.t1 AT5G15130 46.809 94 46 2 195 287 210 300 1.26e-22 98.6
MS.gene82340.t1 AT5G15130 47.541 61 31 1 79 138 227 287 9.12e-11 63.2
MS.gene82340.t1 AT1G69310 55.128 78 31 1 191 268 126 199 1.99e-22 95.1
MS.gene82340.t1 AT1G69310 50.000 58 25 1 79 136 147 200 1.53e-11 64.3
MS.gene82340.t1 AT4G22070 45.455 88 47 1 185 271 270 357 4.30e-22 97.1
MS.gene82340.t1 AT4G22070 45.455 88 47 1 185 271 270 357 4.30e-22 97.1
MS.gene82340.t1 AT4G22070 45.455 88 47 1 185 271 270 357 4.30e-22 97.1
MS.gene82340.t1 AT4G22070 45.455 88 47 1 185 271 270 357 4.30e-22 97.1
MS.gene82340.t1 AT1G62300 50.633 79 38 1 194 271 294 372 9.77e-22 95.9
MS.gene82340.t1 AT5G64810 50.704 71 35 0 199 269 97 167 1.26e-21 90.9
MS.gene82340.t1 AT5G64810 48.276 58 30 0 79 136 110 167 5.86e-12 64.3
MS.gene82340.t1 AT2G46130 52.632 76 32 1 193 268 11 82 7.91e-21 86.3
MS.gene82340.t1 AT4G01720 52.632 76 35 1 197 271 224 299 2.59e-20 91.7
MS.gene82340.t1 AT4G31550 50.588 85 38 2 193 276 230 311 2.86e-20 90.1
MS.gene82340.t1 AT4G31550 50.588 85 38 2 193 276 229 310 3.06e-20 89.7
MS.gene82340.t1 AT1G18860 41.837 98 56 1 175 271 202 299 8.60e-20 90.1
MS.gene82340.t1 AT2G34830 42.857 98 49 2 175 271 184 275 3.26e-19 88.2
MS.gene82340.t1 AT2G34830 41.584 101 52 2 175 274 193 287 3.86e-19 87.8
MS.gene82340.t1 AT4G31800 52.113 71 32 2 205 273 103 173 4.05e-19 85.5
MS.gene82340.t1 AT2G25000 51.429 70 32 2 206 273 96 165 4.53e-19 84.7
MS.gene82340.t1 AT2G25000 47.619 63 32 1 80 141 104 166 4.73e-12 65.1
MS.gene82340.t1 AT2G25000 51.429 70 32 2 206 273 96 165 4.53e-19 84.7
MS.gene82340.t1 AT2G25000 47.619 63 32 1 80 141 104 166 4.73e-12 65.1
MS.gene82340.t1 AT2G30590 48.718 78 39 1 192 268 293 370 5.63e-19 87.0
MS.gene82340.t1 AT4G31800 52.113 71 32 2 205 273 168 238 6.65e-19 85.9
MS.gene82340.t1 AT2G25000 51.429 70 32 2 206 273 118 187 9.27e-19 84.3
MS.gene82340.t1 AT2G25000 47.619 63 32 1 80 141 126 188 6.33e-12 65.1
MS.gene82340.t1 AT4G23550 44.944 89 45 2 199 286 127 212 1.00e-18 85.5
MS.gene82340.t1 AT4G23550 48.333 60 30 1 80 138 141 200 2.51e-12 67.0
MS.gene82340.t1 AT2G23320 48.101 79 37 2 193 270 224 299 1.03e-18 85.5
MS.gene82340.t1 AT2G25000 51.429 70 32 2 206 273 139 208 1.21e-18 84.3
MS.gene82340.t1 AT2G25000 47.619 63 32 1 80 141 147 209 7.82e-12 65.1
MS.gene82340.t1 AT1G30650 41.584 101 52 2 175 274 186 280 1.38e-18 86.3
MS.gene82340.t1 AT1G80840 51.562 64 30 1 210 272 144 207 3.14e-18 84.0
MS.gene82340.t1 AT1G80840 46.341 82 41 2 80 160 147 226 8.62e-14 71.2
MS.gene82340.t1 AT1G29280 41.584 101 52 2 172 271 40 134 3.88e-18 82.8
MS.gene82340.t1 AT2G24570 50.649 77 34 2 193 268 227 300 9.52e-18 82.8
MS.gene82340.t1 AT3G58710 41.284 109 55 3 177 282 41 143 1.11e-17 81.6
MS.gene82340.t1 AT4G24240 42.105 95 43 3 177 270 257 340 1.49e-17 82.4
MS.gene82340.t1 AT4G01250 55.556 63 27 1 210 271 126 188 1.73e-17 81.6
MS.gene82340.t1 AT4G01250 44.118 68 37 1 72 138 121 188 4.19e-12 66.2
MS.gene82340.t1 AT5G28650 40.777 103 49 3 177 278 238 329 2.50e-17 81.6
MS.gene82340.t1 AT3G58710 40.179 112 58 3 174 282 39 144 2.54e-17 80.9
MS.gene82340.t1 AT5G43290 47.619 84 40 2 188 268 88 170 4.10e-17 80.1
MS.gene82340.t1 AT5G43290 54.386 57 26 0 79 135 114 170 6.45e-14 71.2
MS.gene82340.t1 AT3G04670 40.777 103 49 3 177 278 238 329 4.38e-17 80.9
MS.gene82340.t1 AT1G69810 40.000 95 53 3 195 287 128 220 8.48e-16 77.4
MS.gene82340.t1 AT5G52830 50.769 65 31 1 209 272 162 226 1.01e-15 77.4
MS.gene82340.t1 AT5G52830 48.333 60 30 1 80 138 166 225 4.64e-13 69.3
MS.gene82340.t1 AT1G69810 40.000 95 53 3 195 287 186 278 1.17e-15 77.4
MS.gene82340.t1 AT5G45050 52.381 63 29 1 213 274 1181 1243 2.62e-15 77.4
MS.gene82340.t1 AT5G45050 52.381 63 29 1 213 274 1153 1215 2.69e-15 77.4
MS.gene82340.t1 AT5G45050 52.381 63 29 1 213 274 1042 1104 2.69e-15 77.4
MS.gene82340.t1 AT3G56400 33.333 138 84 3 149 278 56 193 4.47e-15 74.7
MS.gene82340.t1 AT4G23810 42.466 73 39 1 64 133 143 215 1.10e-13 71.2
MS.gene82340.t1 AT1G66560 50.000 58 26 1 212 266 103 160 2.64e-13 68.9
MS.gene82340.t1 AT5G45260 43.529 85 40 4 62 142 1192 1272 6.56e-13 70.1
MS.gene82340.t1 AT5G24110 43.939 66 34 1 71 133 105 170 6.87e-13 68.6
MS.gene82340.t1 AT4G11070 33.684 95 53 2 42 133 79 166 6.46e-12 65.5
MS.gene82340.t1 AT4G11070 33.684 95 53 2 42 133 111 198 8.26e-12 65.5
MS.gene82340.t1 AT2G46400 38.750 80 46 1 190 266 82 161 1.04e-11 65.1
MS.gene82340.t1 AT2G46400 41.096 73 40 1 79 148 104 176 2.99e-11 63.5
MS.gene82340.t1 AT2G40740 43.750 64 33 1 73 133 167 230 3.40e-11 63.5
MS.gene82340.t1 AT2G40740 43.750 64 33 1 73 133 176 239 4.93e-11 63.2
MS.gene82340.t1 AT1G66550 45.614 57 28 1 213 266 104 160 6.95e-11 62.0
MS.gene82340.t1 AT1G66550 45.614 57 28 1 213 266 109 165 7.05e-11 62.0

Find 64 sgRNAs with CRISPR-Local

Find 131 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATATAGATGGCGCAAATA+TGG 0.214842 4.2:+27104215 MS.gene82340:CDS
ATATGTAATCACCTTGGATA+TGG 0.279577 4.2:-27104260 None:intergenic
TATGTTGTCAATACAGCTTT+AGG 0.290861 4.2:-27104798 None:intergenic
TATGTGAAAGGGCTGGATTC+AGG 0.322005 4.2:-27104130 None:intergenic
GTAACTGCAATTATTTATAA+AGG 0.324911 4.2:+27103641 MS.gene82340:CDS
GAAGAATACTCAACAGAGTT+TGG 0.345418 4.2:-27103428 None:intergenic
GGTACTAATGATGCAGAAAA+TGG 0.358891 4.2:-27103341 None:intergenic
AAGGGCTGGATTCAGGAGTT+TGG 0.376159 4.2:-27104123 None:intergenic
GGATACAACTGGAGGAAGTA+TGG 0.398456 4.2:+27103512 MS.gene82340:CDS
AACAAGTGATGTGGATCTCT+TGG 0.410616 4.2:+27104187 MS.gene82340:CDS
ATGTTATTGAGTGTTATTGA+TGG 0.430666 4.2:-27103389 None:intergenic
GATATAGATGGCGCAAATAT+GGG 0.438866 4.2:+27104216 MS.gene82340:CDS
CAACTCCGGGTTGCAATGTT+CGG 0.442776 4.2:+27104748 MS.gene82340:CDS
CAGAAAATGGATGTTCAGAT+TGG 0.461752 4.2:-27103328 None:intergenic
TTGTTGTTTGTGAGCTTGCT+AGG 0.486292 4.2:-27103689 None:intergenic
CATGTTCACTTCTCCACCTC+AGG 0.493399 4.2:+27102237 None:intergenic
TTGTGAGCTTGCTAGGACGT+GGG 0.495694 4.2:-27103682 None:intergenic
TATGTAATCACCTTGGATAT+GGG 0.509899 4.2:-27104259 None:intergenic
CCTTACCTTCTCTTGAGACC+AGG 0.513180 4.2:-27103791 None:intergenic
GTTGAACGCGATCCTGTAGA+TGG 0.515499 4.2:+27103614 MS.gene82340:CDS
GATGTGCCACTGCTGAAGGC+TGG 0.517301 4.2:-27104947 None:intergenic
CTTAGATGTGCCACTGCTGA+AGG 0.520698 4.2:-27104951 None:intergenic
GTGCACTTGTAATAACTTCG+AGG 0.523109 4.2:-27103563 None:intergenic
TCTTGGAGGATGGATATAGA+TGG 0.523927 4.2:+27104204 MS.gene82340:CDS
ATGCACTATTATTGCTAGCA+AGG 0.524276 4.2:-27104872 None:intergenic
GCTGTATTGACAACATATGA+AGG 0.524886 4.2:+27104804 MS.gene82340:CDS
ACAAGTGACAGTGAGGAAGA+AGG 0.529857 4.2:+27103740 MS.gene82340:CDS
CTATTACAAATGCACAACTC+CGG 0.535365 4.2:+27104734 MS.gene82340:CDS
TGACTGTTAGTCTTAGCTGC+TGG 0.535682 4.2:-27104846 None:intergenic
TTGAGACAGTCCTATGTGAA+AGG 0.535910 4.2:-27104142 None:intergenic
TATTACAAATGCACAACTCC+GGG 0.539125 4.2:+27104735 MS.gene82340:CDS
CTAATGACGACGGATACAAC+TGG 0.541447 4.2:+27103501 MS.gene82340:CDS
TTTGTGAGCTTGCTAGGACG+TGG 0.549051 4.2:-27103683 None:intergenic
GCAGTTACATGACCATCTAC+AGG 0.555080 4.2:-27103626 None:intergenic
TGAGACAGTCCTATGTGAAA+GGG 0.556933 4.2:-27104141 None:intergenic
ACAGTCCTATGTGAAAGGGC+TGG 0.559923 4.2:-27104137 None:intergenic
TTGAAGTATATTACCTGAGG+TGG 0.561057 4.2:-27102250 None:intergenic
TTGTGTCAATGAGGTACTGT+TGG 0.566128 4.2:-27103363 None:intergenic
AGATGCAGAATTTCAACAGA+AGG 0.567059 4.2:+27104916 MS.gene82340:CDS
GATGCAGAATTTCAACAGAA+GGG 0.571983 4.2:+27104917 MS.gene82340:CDS
AGTGGCACATCTAAGATTGA+AGG 0.580831 4.2:+27104959 MS.gene82340:CDS
GCATGTTGAGAGGGTTTCAA+CGG 0.585716 4.2:+27104773 MS.gene82340:CDS
ATGAACCTGGTCTCAAGAGA+AGG 0.587168 4.2:+27103786 MS.gene82340:CDS
TTCTTCTGTGAATGTTGACA+AGG 0.592690 4.2:+27103478 MS.gene82340:CDS
TGTTCGGAAGCATGTTGAGA+GGG 0.594276 4.2:+27104764 MS.gene82340:CDS
AAGTGATGTGGATCTCTTGG+AGG 0.597649 4.2:+27104190 MS.gene82340:CDS
TTGGACTTGAGCATTTGAGT+AGG 0.606080 4.2:-27103309 None:intergenic
TCAACACCAGCCTTCAGCAG+TGG 0.608907 4.2:+27104941 MS.gene82340:CDS
TGAATCCAGCCCTTTCACAT+AGG 0.612428 4.2:+27104132 MS.gene82340:CDS
ACTGAAGTAGATTATGAACC+TGG 0.614019 4.2:+27103773 MS.gene82340:CDS
ATGTTCGGAAGCATGTTGAG+AGG 0.614164 4.2:+27104763 MS.gene82340:CDS
CTGAGGTGGAGAAGTGAACA+TGG 0.615388 4.2:-27102236 None:intergenic
TCAAAGGCAACCCATATCCA+AGG 0.626448 4.2:+27104249 MS.gene82340:CDS
TATGGACAGAAACAAGTGAA+AGG 0.627695 4.2:+27103530 MS.gene82340:CDS
GATGTGGATCTCTTGGAGGA+TGG 0.628338 4.2:+27104194 MS.gene82340:CDS
ATGCAGAATTTCAACAGAAG+GGG 0.631709 4.2:+27104918 MS.gene82340:CDS
TGCTTCCGAACATTGCAACC+CGG 0.632799 4.2:-27104753 None:intergenic
TATGGGCAGAAAGTTGTCAA+AGG 0.640343 4.2:+27104233 MS.gene82340:CDS
TGTGTCAATGAGGTACTGTT+GGG 0.640910 4.2:-27103362 None:intergenic
GTCAGGAACAAGTGACAGTG+AGG 0.650399 4.2:+27103733 MS.gene82340:CDS
TGATGGAACTTGTGTCAATG+AGG 0.653592 4.2:-27103372 None:intergenic
TGTGCAAACAACAAGTGATG+TGG 0.666996 4.2:+27104178 MS.gene82340:CDS
GTTGACAAGGCTAATGACGA+CGG 0.705023 4.2:+27103491 MS.gene82340:CDS
ATGACGACGGATACAACTGG+AGG 0.731932 4.2:+27103504 MS.gene82340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATACTTAAGTAATTTTTTT+TGG - chr4.2:27102897-27102916 None:intergenic 10.0%
!!! TTTTAAAAAAATTACACTAA+CGG - chr4.2:27103883-27103902 None:intergenic 10.0%
!!! TTTTTGTAAAAAAAAACATA+TGG + chr4.2:27102759-27102778 MS.gene82340:intron 10.0%
!!! AAAAAACATATGGATTTTAA+TGG + chr4.2:27102769-27102788 MS.gene82340:intron 15.0%
!!! AAATTTTGTCTATAAAGTAT+CGG + chr4.2:27102828-27102847 MS.gene82340:intron 15.0%
!!! ATATGTTTATTCCTTTTTTT+AGG - chr4.2:27102735-27102754 None:intergenic 15.0%
!!! TAATTAAAAAGTATATTGGT+TGG + chr4.2:27102502-27102521 MS.gene82340:intron 15.0%
!! ATACATCTACTTAATTATGT+AGG + chr4.2:27104283-27104302 MS.gene82340:intron 20.0%
!! GGATAAATTCAAAAATTCTT+AGG - chr4.2:27102876-27102895 None:intergenic 20.0%
!! GTAACTGCAATTATTTATAA+AGG + chr4.2:27103641-27103660 MS.gene82340:CDS 20.0%
!! TACATCTACTTAATTATGTA+GGG + chr4.2:27104284-27104303 MS.gene82340:intron 20.0%
! AAAATGAGTGATATCTTTCT+TGG - chr4.2:27102547-27102566 None:intergenic 25.0%
! AAATTAGTGATACACCTTTA+GGG - chr4.2:27104324-27104343 None:intergenic 25.0%
! AAATTCAACCGCTATTTATT+TGG + chr4.2:27103206-27103225 MS.gene82340:intron 25.0%
! AATCATAATTCATAGCTGTT+TGG - chr4.2:27103994-27104013 None:intergenic 25.0%
! ATAAACGTTCTCCTAAAAAA+AGG + chr4.2:27102721-27102740 MS.gene82340:intron 25.0%
! ATGTATATATGTAATCACCT+TGG - chr4.2:27104269-27104288 None:intergenic 25.0%
! CTACTATATATGCTTCAATT+AGG + chr4.2:27103040-27103059 MS.gene82340:intron 25.0%
! CTATATTTAGAGAATGAGAT+AGG - chr4.2:27102385-27102404 None:intergenic 25.0%
! CTATCTCATTCTCTAAATAT+AGG + chr4.2:27102383-27102402 MS.gene82340:intron 25.0%
! GACTAAACTCTATAATTTCA+AGG + chr4.2:27104499-27104518 MS.gene82340:intron 25.0%
! TAAATTAGTGATACACCTTT+AGG - chr4.2:27104325-27104344 None:intergenic 25.0%
! TAATTTAATCCAAACTTCCA+AGG - chr4.2:27103169-27103188 None:intergenic 25.0%
! TATATGCTTCAATTAGGATA+AGG + chr4.2:27103046-27103065 MS.gene82340:intron 25.0%
! TGGAATTGGAATATTAAACA+AGG + chr4.2:27103114-27103133 MS.gene82340:intron 25.0%
! TTCAATCTTCTTACAAAAGA+AGG + chr4.2:27102963-27102982 MS.gene82340:intron 25.0%
!! ATGTTATTGAGTGTTATTGA+TGG - chr4.2:27103392-27103411 None:intergenic 25.0%
!! TTTAATTTCATCGAGCTTAA+GGG - chr4.2:27102354-27102373 None:intergenic 25.0%
!!! AAATTTTGTGTCTGAAATTG+CGG + chr4.2:27104368-27104387 MS.gene82340:intron 25.0%
!!! TACAACTACGAATTTTTTTC+AGG - chr4.2:27102469-27102488 None:intergenic 25.0%
!!! TAGTTTTATGTGATGATGTT+AGG + chr4.2:27104071-27104090 MS.gene82340:intron 25.0%
!!! TTTTAATTTCATCGAGCTTA+AGG - chr4.2:27102355-27102374 None:intergenic 25.0%
AATGTAACTAAGCATTTCTG+AGG - chr4.2:27104599-27104618 None:intergenic 30.0%
AATTTCAAGGTCAAGAATGT+TGG + chr4.2:27104512-27104531 MS.gene82340:intron 30.0%
AGTATTTATTGCTCACGAAA+AGG + chr4.2:27102580-27102599 MS.gene82340:intron 30.0%
ATATGTAATCACCTTGGATA+TGG - chr4.2:27104263-27104282 None:intergenic 30.0%
ATGTAACTAAGCATTTCTGA+GGG - chr4.2:27104598-27104617 None:intergenic 30.0%
GCATTCTTGTATCATAATGT+AGG + chr4.2:27104709-27104728 MS.gene82340:intron 30.0%
TATGTAATCACCTTGGATAT+GGG - chr4.2:27104262-27104281 None:intergenic 30.0%
TATGTTGTCAATACAGCTTT+AGG - chr4.2:27104801-27104820 None:intergenic 30.0%
TTAACCAGCCAAATAAATAG+CGG - chr4.2:27103217-27103236 None:intergenic 30.0%
TTAATTTCATCGAGCTTAAG+GGG - chr4.2:27102353-27102372 None:intergenic 30.0%
! CACATTTGATTAGCTAAGTT+AGG + chr4.2:27103073-27103092 MS.gene82340:intron 30.0%
! CTTGATCTCAAGTTTCATTT+TGG + chr4.2:27102988-27103007 MS.gene82340:intron 30.0%
! GTTGTTTGCACAATGATTTT+AGG - chr4.2:27104170-27104189 None:intergenic 30.0%
! TTCTTAGGTATCTTTGAGTT+TGG - chr4.2:27102861-27102880 None:intergenic 30.0%
!! AATTTTGTGTCTGAAATTGC+GGG + chr4.2:27104369-27104388 MS.gene82340:intron 30.0%
!! TCTAATTGTTGATGACCATT+AGG + chr4.2:27104540-27104559 MS.gene82340:intron 30.0%
!!! TCACTATCTTTTCTAGAACA+TGG - chr4.2:27104686-27104705 None:intergenic 30.0%
ACTGAAGTAGATTATGAACC+TGG + chr4.2:27103773-27103792 MS.gene82340:CDS 35.0%
ACTTCACATCTGATTGGAAT+TGG + chr4.2:27103100-27103119 MS.gene82340:intron 35.0%
AGATGCAGAATTTCAACAGA+AGG + chr4.2:27104916-27104935 MS.gene82340:CDS 35.0%
ATGCACTATTATTGCTAGCA+AGG - chr4.2:27104875-27104894 None:intergenic 35.0%
ATGCAGAATTTCAACAGAAG+GGG + chr4.2:27104918-27104937 MS.gene82340:CDS 35.0%
ATTTATTGCTCACGAAAAGG+AGG + chr4.2:27102583-27102602 MS.gene82340:intron 35.0%
CAAAAGATACCTTGGAAGTT+TGG + chr4.2:27103157-27103176 MS.gene82340:intron 35.0%
CACGAAATCAAAAGATACCT+TGG + chr4.2:27103149-27103168 MS.gene82340:intron 35.0%
CAGAAAATGGATGTTCAGAT+TGG - chr4.2:27103331-27103350 None:intergenic 35.0%
CTAAAATTGTCCTGAATGTG+TGG - chr4.2:27104478-27104497 None:intergenic 35.0%
CTAAATGATCAAGTGCTTTC+TGG + chr4.2:27103014-27103033 MS.gene82340:intron 35.0%
CTATTACAAATGCACAACTC+CGG + chr4.2:27104734-27104753 MS.gene82340:CDS 35.0%
GAAGAATACTCAACAGAGTT+TGG - chr4.2:27103431-27103450 None:intergenic 35.0%
GAGTTGAAGTATATTACCTG+AGG - chr4.2:27102256-27102275 None:intergenic 35.0%
GATATAGATGGCGCAAATAT+GGG + chr4.2:27104216-27104235 MS.gene82340:CDS 35.0%
GATCTAGTAGACAATCCTAA+TGG - chr4.2:27104558-27104577 None:intergenic 35.0%
GATGCAGAATTTCAACAGAA+GGG + chr4.2:27104917-27104936 MS.gene82340:CDS 35.0%
GGTACTAATGATGCAGAAAA+TGG - chr4.2:27103344-27103363 None:intergenic 35.0%
TAACATTAGTCCACACATTC+AGG + chr4.2:27104465-27104484 MS.gene82340:intron 35.0%
TATGGACAGAAACAAGTGAA+AGG + chr4.2:27103530-27103549 MS.gene82340:CDS 35.0%
TATTACAAATGCACAACTCC+GGG + chr4.2:27104735-27104754 MS.gene82340:CDS 35.0%
TCGAACAATTTAGTCCCTAA+AGG + chr4.2:27104307-27104326 MS.gene82340:intron 35.0%
TTCTTCTGTGAATGTTGACA+AGG + chr4.2:27103478-27103497 MS.gene82340:CDS 35.0%
TTGAAGTATATTACCTGAGG+TGG - chr4.2:27102253-27102272 None:intergenic 35.0%
! GCTGTATTGACAACATATGA+AGG + chr4.2:27104804-27104823 MS.gene82340:CDS 35.0%
! TAGGTATCTTTGAGTTTGGT+CGG - chr4.2:27102857-27102876 None:intergenic 35.0%
AACAAGTGATGTGGATCTCT+TGG + chr4.2:27104187-27104206 MS.gene82340:CDS 40.0%
CTTCCATAGAGTCAAGTCAA+CGG + chr4.2:27102312-27102331 MS.gene82340:intron 40.0%
GGAGTTACTTCACATCTGAT+TGG + chr4.2:27103094-27103113 MS.gene82340:intron 40.0%
GGATATAGATGGCGCAAATA+TGG + chr4.2:27104215-27104234 MS.gene82340:CDS 40.0%
GTGCACTTGTAATAACTTCG+AGG - chr4.2:27103566-27103585 None:intergenic 40.0%
TATGGGCAGAAAGTTGTCAA+AGG + chr4.2:27104233-27104252 MS.gene82340:CDS 40.0%
TCAACCGCTATTTATTTGGC+TGG + chr4.2:27103210-27103229 MS.gene82340:intron 40.0%
TCTTGGAGGATGGATATAGA+TGG + chr4.2:27104204-27104223 MS.gene82340:CDS 40.0%
TGAGACAGTCCTATGTGAAA+GGG - chr4.2:27104144-27104163 None:intergenic 40.0%
TGATGGAACTTGTGTCAATG+AGG - chr4.2:27103375-27103394 None:intergenic 40.0%
TGTGCAAACAACAAGTGATG+TGG + chr4.2:27104178-27104197 MS.gene82340:CDS 40.0%
TTGAGACAGTCCTATGTGAA+AGG - chr4.2:27104145-27104164 None:intergenic 40.0%
TTGGACTTGAGCATTTGAGT+AGG - chr4.2:27103312-27103331 None:intergenic 40.0%
! AGTGGCACATCTAAGATTGA+AGG + chr4.2:27104959-27104978 MS.gene82340:CDS 40.0%
! TTTTTCGTCACAAGACAGCT+TGG - chr4.2:27103593-27103612 None:intergenic 40.0%
!! TGTGTCAATGAGGTACTGTT+GGG - chr4.2:27103365-27103384 None:intergenic 40.0%
!! TTACCGTTGACTTGACTCTA+TGG - chr4.2:27102318-27102337 None:intergenic 40.0%
!! TTGTGTCAATGAGGTACTGT+TGG - chr4.2:27103366-27103385 None:intergenic 40.0%
!! TTGTTGTTTGTGAGCTTGCT+AGG - chr4.2:27103692-27103711 None:intergenic 40.0%
AAGTGATGTGGATCTCTTGG+AGG + chr4.2:27104190-27104209 MS.gene82340:CDS 45.0%
ACAAGTGACAGTGAGGAAGA+AGG + chr4.2:27103740-27103759 MS.gene82340:CDS 45.0%
ATGAACCTGGTCTCAAGAGA+AGG + chr4.2:27103786-27103805 MS.gene82340:CDS 45.0%
CTAATGACGACGGATACAAC+TGG + chr4.2:27103501-27103520 MS.gene82340:CDS 45.0%
CTGGTCTCAAGAGAAGGTAA+GGG + chr4.2:27103792-27103811 MS.gene82340:intron 45.0%
GCAGTTACATGACCATCTAC+AGG - chr4.2:27103629-27103648 None:intergenic 45.0%
GCATGTTGAGAGGGTTTCAA+CGG + chr4.2:27104773-27104792 MS.gene82340:CDS 45.0%
GGATACAACTGGAGGAAGTA+TGG + chr4.2:27103512-27103531 MS.gene82340:CDS 45.0%
GTTGACAAGGCTAATGACGA+CGG + chr4.2:27103491-27103510 MS.gene82340:CDS 45.0%
TATGTGAAAGGGCTGGATTC+AGG - chr4.2:27104133-27104152 None:intergenic 45.0%
TCAAAGGCAACCCATATCCA+AGG + chr4.2:27104249-27104268 MS.gene82340:CDS 45.0%
TGAATCCAGCCCTTTCACAT+AGG + chr4.2:27104132-27104151 MS.gene82340:CDS 45.0%
! ATGTTCGGAAGCATGTTGAG+AGG + chr4.2:27104763-27104782 MS.gene82340:CDS 45.0%
! TGTTCGGAAGCATGTTGAGA+GGG + chr4.2:27104764-27104783 MS.gene82340:CDS 45.0%
!! AGCGTGCAACAAGTTTTGTC+AGG + chr4.2:27103716-27103735 MS.gene82340:CDS 45.0%
!! TGACTGTTAGTCTTAGCTGC+TGG - chr4.2:27104849-27104868 None:intergenic 45.0%
!! TGCTTGCTGTTGGGAGAATA+AGG - chr4.2:27103279-27103298 None:intergenic 45.0%
!! TTGTGCTAGTGCTTGCTGTT+GGG - chr4.2:27103288-27103307 None:intergenic 45.0%
!!! TTAATAATTAAAAAGTATAT+TGG + chr4.2:27102498-27102517 MS.gene82340:intron 5.0%
AAGGGCTGGATTCAGGAGTT+TGG - chr4.2:27104126-27104145 None:intergenic 50.0%
ACAGTCCTATGTGAAAGGGC+TGG - chr4.2:27104140-27104159 None:intergenic 50.0%
ATCGAGCTTAAGGGGTCATG+TGG - chr4.2:27102345-27102364 None:intergenic 50.0%
ATGACGACGGATACAACTGG+AGG + chr4.2:27103504-27103523 MS.gene82340:CDS 50.0%
CAACTCCGGGTTGCAATGTT+CGG + chr4.2:27104748-27104767 MS.gene82340:CDS 50.0%
CCTGGTCTCAAGAGAAGGTA+AGG + chr4.2:27103791-27103810 MS.gene82340:intron 50.0%
CCTTACCTTCTCTTGAGACC+AGG - chr4.2:27103794-27103813 None:intergenic 50.0%
GATGTGGATCTCTTGGAGGA+TGG + chr4.2:27104194-27104213 MS.gene82340:CDS 50.0%
GTCAGGAACAAGTGACAGTG+AGG + chr4.2:27103733-27103752 MS.gene82340:CDS 50.0%
GTTGAACGCGATCCTGTAGA+TGG + chr4.2:27103614-27103633 MS.gene82340:CDS 50.0%
TGCTTCCGAACATTGCAACC+CGG - chr4.2:27104756-27104775 None:intergenic 50.0%
! CTTAGATGTGCCACTGCTGA+AGG - chr4.2:27104954-27104973 None:intergenic 50.0%
!! CTTGTGCTAGTGCTTGCTGT+TGG - chr4.2:27103289-27103308 None:intergenic 50.0%
!! TTGTGAGCTTGCTAGGACGT+GGG - chr4.2:27103685-27103704 None:intergenic 50.0%
!! TTTGTGAGCTTGCTAGGACG+TGG - chr4.2:27103686-27103705 None:intergenic 50.0%
GAGCTTAAGGGGTCATGTGG+TGG - chr4.2:27102342-27102361 None:intergenic 55.0%
TCAACACCAGCCTTCAGCAG+TGG + chr4.2:27104941-27104960 MS.gene82340:CDS 55.0%
! GATGTGCCACTGCTGAAGGC+TGG - chr4.2:27104950-27104969 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 27102238 27104995 27102238 ID=MS.gene82340
chr4.2 mRNA 27102238 27104995 27102238 ID=MS.gene82340.t1;Parent=MS.gene82340
chr4.2 exon 27102238 27102258 27102238 ID=MS.gene82340.t1.exon1;Parent=MS.gene82340.t1
chr4.2 CDS 27102238 27102258 27102238 ID=cds.MS.gene82340.t1;Parent=MS.gene82340.t1
chr4.2 exon 27103293 27103807 27103293 ID=MS.gene82340.t1.exon2;Parent=MS.gene82340.t1
chr4.2 CDS 27103293 27103807 27103293 ID=cds.MS.gene82340.t1;Parent=MS.gene82340.t1
chr4.2 exon 27104112 27104270 27104112 ID=MS.gene82340.t1.exon3;Parent=MS.gene82340.t1
chr4.2 CDS 27104112 27104270 27104112 ID=cds.MS.gene82340.t1;Parent=MS.gene82340.t1
chr4.2 exon 27104731 27104995 27104731 ID=MS.gene82340.t1.exon4;Parent=MS.gene82340.t1
chr4.2 CDS 27104731 27104995 27104731 ID=cds.MS.gene82340.t1;Parent=MS.gene82340.t1
Gene Sequence

>MS.gene82340

ATGTTCACTTCTCCACCTCAGGTAATATACTTCAACTCATTCTTAACTATTGCTTGTCTTTGTTTCATTTTTTGCTTCCATAGAGTCAAGTCAACGGTAATCCACCACATGACCCCTTAAGCTCGATGAAATTAAAAAGTTACACCTATCTCATTCTCTAAATATAGGACTGATTAAAACTCATAATAATTTTTCTTAAAAAAAAAAAAAAAAACTAACAAGAATTTTCCTGAAAAAAATTCGTAGTTGTATTATTTTTGTTAATAATTAAAAAGTATATTGGTTGGTTTTTTAAGTGTACAATTTCCAAGAAAGATATCACTCATTTTTATTTTTTATTATAGTATTTATTGCTCACGAAAAGGAGGTAATTAAGAGTGATTTAACAAATAAAAAATTAATTCAATTAATTTTTTTCGAAAAAGTGTTATAAAAAATTAAGAATTAAGTAAATTTTTCAAAAGTATTTTAAGAAAAAGTGTTATAAACGTTCTCCTAAAAAAAGGAATAAACATATGAATTTTTTGTAAAAAAAAACATATGGATTTTAATGGTAGATAAAATCTTTAGAATAAATTCAAATGTTAAATAAATTTTGTCTATAAAGTATCGGTATCCGACCAAACTCAAAGATACCTAAGAATTTTTGAATTTATCCAAAAAAAATTACTTAAGTATTTAGTGAACTGAAAAACAATAGTACTTGCTTTATGTAATTATAGTCATTCAATCTTCTTACAAAAGAAGGTACTTGATCTCAAGTTTCATTTTGGAGTCTAAATGATCAAGTGCTTTCTGGCTACTACTATATATGCTTCAATTAGGATAAGGCATGCACATTTGATTAGCTAAGTTAGGAGTTACTTCACATCTGATTGGAATTGGAATATTAAACAAGGATGAATGAAATACACGAAATCAAAAGATACCTTGGAAGTTTGGATTAAATTAAATTAAGTGATGCAGCAAAATTCAACCGCTATTTATTTGGCTGGTTAAGATAATCATTCTAAATTTGAATTGAAGTGTTTTTTGTTTCCTTATTCTCCCAACAGCAAGCACTAGCACAAGCCTACTCAAATGCTCAAGTCCAATCTGAACATCCATTTTCTGCATCATTAGTACCCAACAGTACCTCATTGACACAAGTTCCATCAATAACACTCAATAACATTGCACAACAACTGATACCAAACTCTGTTGAGTATTCTTCTAACTCAGAACAAAGATTACACAAGTCTTCTTCTGTGAATGTTGACAAGGCTAATGACGACGGATACAACTGGAGGAAGTATGGACAGAAACAAGTGAAAGGTTGCGAGTTTCCTCGAAGTTATTACAAGTGCACACATCCAAGCTGTCTTGTGACGAAAAAAGTTGAACGCGATCCTGTAGATGGTCATGTAACTGCAATTATTTATAAAGGAGAGCACATTCATCAACGCCCACGTCCTAGCAAGCTCACAAACAACAATTCAAGCGTGCAACAAGTTTTGTCAGGAACAAGTGACAGTGAGGAAGAAGGAGATCATGAAACTGAAGTAGATTATGAACCTGGTCTCAAGAGAAGGTAAGGGTTAAAAGTTCGTAAAACTGTTCTTGTTACGATTAATCTATTAGTTTTGAGATTAATTTTGATGCACCGTTAGTGTAATTTTTTTAAAACTGTCAATCAATCACAATATAAAAAGTATGATTGATCGACAATATAAAAAGTATTTACACTATCGATAAAAAGTATTTTTTTTAATAACCAAACAGCTATGAATTATGATTGATCGACAATATAAAAAGTATTTACACTATCGATACATATCAATCAAATAATGCATTTAGTTTTATGTGATGATGTTAGGAGTTTTATGATTCTGCAGAAAAACAGAAGCCAAACTCCTGAATCCAGCCCTTTCACATAGGACTGTCTCAAAGCCTAAAATCATTGTGCAAACAACAAGTGATGTGGATCTCTTGGAGGATGGATATAGATGGCGCAAATATGGGCAGAAAGTTGTCAAAGGCAACCCATATCCAAGGTGATTACATATATACATCTACTTAATTATGTAGGGTCGAACAATTTAGTCCCTAAAGGTGTATCACTAATTTACTTGAGCAACAAAAATGTATCACAAATTTTGTGTCTGAAATTGCGGGAGTTGAGCAATTTAATTTAGTCTTTGAAACAAACGAAACTTTGAAATGATTCATGAAATTGAAAATCTTTCAATAACATTAGTCCACACATTCAGGACAATTTTAGTGACTAAACTCTATAATTTCAAGGTCAAGAATGTTGGTTCACTCTAATTGTTGATGACCATTAGGATTGTCTACTAGATCTTTCAAAAAACTTTGTTCCCTCAGAAATGCTTAGTTACATTCATCATATTCAGATTATGCTACATAGTAAAATCACAGTATACTTATAGCATACAGACTTGAGATCCATGTTCTAGAAAAGATAGTGATGTGCATTCTTGTATCATAATGTAGGAGCTATTACAAATGCACAACTCCGGGTTGCAATGTTCGGAAGCATGTTGAGAGGGTTTCAACGGATCCTAAAGCTGTATTGACAACATATGAAGGAAAACATAATCATGATGTACCAGCAGCTAAGACTAACAGTCATAACCTTGCTAGCAATAATAGTGCATCACTGCTAAAATCACAAAATGAGATGCAGAATTTCAACAGAAGGGGTCAACACCAGCCTTCAGCAGTGGCACATCTAAGATTGAAGGAAGAGCATATATAA
Protein sequence

>MS.gene82340.t1

MFTSPPQQALAQAYSNAQVQSEHPFSASLVPNSTSLTQVPSITLNNIAQQLIPNSVEYSSNSEQRLHKSSSVNVDKANDDGYNWRKYGQKQVKGCEFPRSYYKCTHPSCLVTKKVERDPVDGHVTAIIYKGEHIHQRPRPSKLTNNNSSVQQVLSGTSDSEEEGDHETEVDYEPGLKRRKTEAKLLNPALSHRTVSKPKIIVQTTSDVDLLEDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERVSTDPKAVLTTYEGKHNHDVPAAKTNSHNLASNNSASLLKSQNEMQNFNRRGQHQPSAVAHLRLKEEHI