AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene82471

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82471.t1 MTR_5g025290 98.662 299 4 0 30 328 86 384 0.0 596
MS.gene82471.t1 MTR_5g025290 98.662 299 4 0 30 328 114 412 0.0 596
MS.gene82471.t1 MTR_8g072350 76.866 268 62 0 30 297 84 351 1.60e-155 441
MS.gene82471.t1 MTR_5g025330 71.333 300 81 2 30 324 84 383 1.03e-145 422
MS.gene82471.t1 MTR_5g025340 70.297 303 81 4 30 325 85 385 1.16e-141 405
MS.gene82471.t1 MTR_5g025370 66.667 297 91 4 30 318 85 381 1.51e-132 382
MS.gene82471.t1 MTR_5g025400 67.376 282 89 2 30 308 86 367 2.37e-129 375
MS.gene82471.t1 MTR_3g112480 39.080 261 156 2 30 289 40 298 4.60e-56 185
MS.gene82471.t1 MTR_3g112480 39.080 261 156 2 30 289 95 353 2.44e-55 185
MS.gene82471.t1 MTR_1g023180 38.722 266 155 3 30 289 96 359 9.96e-53 178
MS.gene82471.t1 MTR_6g081840 33.571 280 169 4 30 308 85 348 9.13e-52 175
MS.gene82471.t1 MTR_5g021160 35.636 275 158 6 36 308 5 262 2.50e-46 158
MS.gene82471.t1 MTR_3g112480 38.158 228 138 2 63 289 1 226 2.30e-45 155
MS.gene82471.t1 MTR_5g021160 35.636 275 158 6 36 308 88 345 7.21e-45 157
MS.gene82471.t1 MTR_1g038560 33.205 259 156 4 33 289 79 322 2.19e-42 150
MS.gene82471.t1 MTR_2g007960 33.446 296 164 6 34 309 91 373 3.46e-40 145
MS.gene82471.t1 MTR_1g114210 32.308 260 161 3 34 292 88 333 3.65e-40 144
MS.gene82471.t1 MTR_3g072500 31.884 276 168 4 33 304 98 357 4.49e-40 145
MS.gene82471.t1 MTR_3g072500 31.852 270 164 4 39 304 1 254 4.49e-40 142
MS.gene82471.t1 MTR_0096s0100 32.374 278 170 5 34 309 97 358 1.44e-39 143
MS.gene82471.t1 MTR_2g016710 32.031 256 156 3 33 287 86 324 6.10e-39 141
MS.gene82471.t1 MTR_1g030580 32.975 279 164 5 33 307 94 353 7.32e-38 139
MS.gene82471.t1 MTR_3g090550 30.370 270 165 4 22 290 77 324 1.61e-37 137
MS.gene82471.t1 MTR_7g111830 31.538 260 167 3 30 287 82 332 2.11e-37 137
MS.gene82471.t1 MTR_1g030600 32.707 266 160 5 29 290 92 342 1.25e-34 130
MS.gene82471.t1 MTR_7g100050 31.541 279 164 6 33 309 91 344 4.13e-34 129
MS.gene82471.t1 MTR_1g074070 32.549 255 153 5 36 288 97 334 5.33e-34 128
MS.gene82471.t1 MTR_1g074160 31.641 256 154 5 36 288 94 331 8.82e-34 127
MS.gene82471.t1 MTR_3g072560 30.189 265 167 3 33 296 96 343 2.19e-33 127
MS.gene82471.t1 MTR_3g012420 30.385 260 161 5 33 288 95 338 3.81e-33 126
MS.gene82471.t1 MTR_1g051120 31.907 257 158 5 36 290 97 338 5.55e-33 125
MS.gene82471.t1 MTR_1g074120 30.739 257 157 5 36 289 97 335 7.71e-33 125
MS.gene82471.t1 MTR_3g095460 31.873 251 158 2 39 288 89 327 9.63e-33 124
MS.gene82471.t1 MTR_4g094342 32.692 260 155 6 30 282 85 331 1.00e-32 125
MS.gene82471.t1 MTR_4g106720 28.794 257 155 5 40 289 97 332 1.51e-32 124
MS.gene82471.t1 MTR_1g074020 30.888 259 160 5 36 292 94 335 2.78e-32 123
MS.gene82471.t1 MTR_1g070175 29.921 254 158 5 36 288 97 331 7.41e-32 122
MS.gene82471.t1 MTR_2g016710 31.624 234 142 3 33 265 86 302 1.07e-31 121
MS.gene82471.t1 MTR_1g068630 32.296 257 155 4 33 287 93 332 1.27e-31 122
MS.gene82471.t1 MTR_2g007970 33.333 258 152 4 34 287 91 332 2.09e-31 122
MS.gene82471.t1 MTR_5g034930 31.154 260 161 5 34 291 85 328 2.35e-31 120
MS.gene82471.t1 MTR_8g041390 30.651 261 162 6 33 288 91 337 3.77e-31 121
MS.gene82471.t1 MTR_5g034980 26.820 261 175 3 32 291 84 329 4.42e-31 120
MS.gene82471.t1 MTR_4g129650 28.315 279 181 4 32 309 88 348 1.24e-30 119
MS.gene82471.t1 MTR_1g030400 28.185 259 176 2 30 287 82 331 2.55e-30 118
MS.gene82471.t1 MTR_2g007990 29.057 265 173 3 34 296 94 345 4.83e-30 118
MS.gene82471.t1 MTR_8g006010 29.804 255 163 3 34 287 89 328 6.33e-30 117
MS.gene82471.t1 MTR_4g094340 30.657 274 157 5 34 296 21 272 7.53e-30 115
MS.gene82471.t1 MTR_5g034910 29.885 261 163 4 34 291 86 329 7.93e-30 116
MS.gene82471.t1 MTR_1g014510 28.315 279 178 4 22 296 84 344 8.37e-30 118
MS.gene82471.t1 MTR_3g072530 29.520 271 165 5 33 296 92 343 1.14e-29 116
MS.gene82471.t1 MTR_4g094340 30.657 274 157 5 34 296 87 338 3.87e-29 115
MS.gene82471.t1 MTR_4g094340 30.657 274 157 5 34 296 105 356 5.91e-29 114
MS.gene82471.t1 MTR_8g006120 31.641 256 159 3 33 287 89 329 1.30e-28 114
MS.gene82471.t1 MTR_2g027030 29.861 288 170 7 34 309 91 358 1.75e-28 113
MS.gene82471.t1 MTR_1g073990 31.008 258 158 5 36 290 97 337 4.85e-28 112
MS.gene82471.t1 MTR_4g129650 27.734 256 166 4 56 310 5 242 5.85e-28 109
MS.gene82471.t1 MTR_1g052205 30.502 259 146 8 62 309 1 236 7.57e-28 109
MS.gene82471.t1 MTR_4g094352 28.803 309 193 7 30 328 85 376 7.96e-28 112
MS.gene82471.t1 MTR_6g036450 29.344 259 158 4 36 287 96 336 8.76e-28 111
MS.gene82471.t1 MTR_0103s0090 28.625 269 168 5 22 288 83 329 1.72e-27 110
MS.gene82471.t1 MTR_5g034990 27.636 275 174 8 40 309 98 352 3.37e-27 109
MS.gene82471.t1 MTR_2g065550 27.344 256 169 3 33 287 90 329 4.25e-27 109
MS.gene82471.t1 MTR_0103s0090 28.287 251 161 4 40 288 5 238 4.66e-27 107
MS.gene82471.t1 MTR_3g072520 30.855 269 161 6 29 290 83 333 7.00e-27 109
MS.gene82471.t1 MTR_8g006090 29.682 283 177 4 33 308 10 277 1.23e-26 106
MS.gene82471.t1 MTR_5g021160 35.838 173 98 3 36 208 88 247 1.66e-26 106
MS.gene82471.t1 MTR_3g095450 28.794 257 157 5 39 287 91 329 4.52e-26 106
MS.gene82471.t1 MTR_8g006090 29.682 283 177 4 33 308 90 357 8.56e-26 105
MS.gene82471.t1 MTR_2g102340 28.626 262 165 6 47 304 104 347 1.09e-25 105
MS.gene82471.t1 MTR_6g007753 27.667 300 191 8 22 318 368 644 1.13e-25 107
MS.gene82471.t1 MTR_6g007753 26.556 241 156 7 81 318 98 320 2.02e-16 80.5
MS.gene82471.t1 MTR_2g007260 30.451 266 172 5 34 296 93 348 3.07e-25 105
MS.gene82471.t1 MTR_4g094360 25.087 287 194 3 2 287 22 288 1.70e-24 102
MS.gene82471.t1 MTR_3g095420 26.792 265 169 7 39 298 93 337 2.09e-24 102
MS.gene82471.t1 MTR_4g094362 26.174 298 192 5 33 327 92 364 3.74e-24 101
MS.gene82471.t1 MTR_6g007743 27.509 269 169 5 22 288 84 328 3.80e-24 101
MS.gene82471.t1 MTR_5g069040 28.016 257 166 4 36 287 99 341 5.92e-24 101
MS.gene82471.t1 MTR_3g019050 27.881 269 173 5 21 287 88 337 1.27e-23 100
MS.gene82471.t1 MTR_4g094360 26.172 256 176 2 33 287 92 335 2.38e-23 99.8
MS.gene82471.t1 MTR_6g007750 25.000 300 200 6 22 318 86 363 8.02e-23 97.8
MS.gene82471.t1 MTR_6g007747 27.124 306 197 7 16 318 76 358 1.92e-22 96.7
MS.gene82471.t1 MTR_3g072500 32.086 187 107 4 33 215 98 268 1.97e-22 95.1
MS.gene82471.t1 MTR_5g034970 27.969 261 159 4 32 291 84 316 2.32e-22 96.3
MS.gene82471.t1 MTR_8g092650 27.197 239 156 3 55 288 27 252 7.82e-22 93.6
MS.gene82471.t1 MTR_5g068790 28.958 259 159 6 36 287 99 339 2.25e-21 94.0
MS.gene82471.t1 MTR_8g092650 27.197 239 156 3 55 288 105 330 6.70e-21 92.0
MS.gene82471.t1 MTR_6g007760 27.419 248 157 7 22 267 83 309 8.41e-21 91.3
MS.gene82471.t1 MTR_5g012650 31.061 264 162 7 34 293 87 334 1.17e-20 91.7
MS.gene82471.t1 MTR_5g089390 24.275 276 184 3 35 307 94 347 2.86e-20 90.5
MS.gene82471.t1 MTR_8g006050 26.848 257 157 6 34 287 74 302 1.81e-19 88.2
MS.gene82471.t1 MTR_6g007740 26.766 269 171 6 22 288 84 328 5.98e-19 87.8
MS.gene82471.t1 MTR_3g095440 25.984 254 168 4 39 287 91 329 1.15e-18 85.9
MS.gene82471.t1 MTR_8g006090 28.205 234 152 2 33 265 90 308 3.09e-17 81.3
MS.gene82471.t1 MTR_6g007757 26.866 268 172 6 22 288 85 329 1.06e-16 80.5
MS.gene82471.t1 MTR_1g074160 33.775 151 81 3 36 185 94 226 2.36e-16 78.2
MS.gene82471.t1 MTR_4g094360 24.786 234 163 2 33 265 92 313 9.08e-16 77.0
MS.gene82471.t1 MTR_3g072500 31.387 137 75 3 33 166 98 218 4.60e-15 73.6
MS.gene82471.t1 MTR_3g072530 30.978 184 102 6 38 199 97 277 2.36e-14 72.8
MS.gene82471.t1 MTR_5g034980 23.784 185 125 3 32 215 84 253 1.46e-12 67.8
MS.gene82471.t1 MTR_4g100840 27.308 260 167 8 34 287 94 337 1.75e-12 67.8
MS.gene82471.t1 MTR_1g014790 40.000 85 51 0 21 105 29 113 3.21e-12 65.1
MS.gene82471.t1 MTR_4g094342 34.266 143 75 5 30 166 85 214 6.64e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82471.t1 AT4G19185 68.404 307 86 4 30 328 17 320 4.77e-150 424
MS.gene82471.t1 AT4G19185 69.180 305 84 4 30 326 95 397 2.88e-149 426
MS.gene82471.t1 AT5G45370 69.847 262 79 0 30 291 94 355 2.94e-130 377
MS.gene82471.t1 AT5G45370 69.847 262 79 0 30 291 94 355 2.94e-130 377
MS.gene82471.t1 AT3G45870 65.461 304 91 6 30 325 86 383 1.23e-125 365
MS.gene82471.t1 AT5G45370 68.775 253 79 0 39 291 1 253 5.50e-125 359
MS.gene82471.t1 AT5G45370 68.775 253 79 0 39 291 1 253 5.50e-125 359
MS.gene82471.t1 AT5G45370 67.176 262 62 1 30 291 94 331 9.82e-120 349
MS.gene82471.t1 AT3G45870 71.610 236 63 2 30 265 86 317 4.29e-114 333
MS.gene82471.t1 AT5G45370 66.816 223 74 0 69 291 73 295 2.28e-104 308
MS.gene82471.t1 AT3G45870 61.397 272 91 6 62 325 43 308 1.05e-100 299
MS.gene82471.t1 AT3G45870 67.157 204 63 2 62 265 43 242 2.21e-89 268
MS.gene82471.t1 AT3G45870 67.157 204 63 2 62 265 43 242 2.21e-89 268
MS.gene82471.t1 AT3G45870 61.765 238 77 6 96 325 1 232 2.48e-86 259
MS.gene82471.t1 AT3G45870 67.742 186 56 2 30 215 86 267 4.00e-81 248
MS.gene82471.t1 AT3G45870 63.758 149 50 2 67 215 1 145 1.32e-58 186
MS.gene82471.t1 AT3G45870 61.039 154 56 2 62 215 43 192 1.14e-56 182
MS.gene82471.t1 AT1G75500 35.254 295 161 5 30 309 94 373 1.62e-53 180
MS.gene82471.t1 AT1G75500 35.254 295 161 5 30 309 94 373 1.62e-53 180
MS.gene82471.t1 AT3G18200 36.981 265 141 5 30 289 109 352 6.76e-51 173
MS.gene82471.t1 AT3G53210 33.333 270 165 3 29 297 26 281 4.65e-48 164
MS.gene82471.t1 AT3G53210 33.083 266 163 3 33 297 87 338 1.64e-46 161
MS.gene82471.t1 AT3G18200 36.100 241 128 5 53 288 2 221 8.43e-45 154
MS.gene82471.t1 AT4G30420 34.420 276 163 4 33 306 79 338 5.20e-42 150
MS.gene82471.t1 AT4G30420 34.420 276 163 4 33 306 89 348 6.74e-42 149
MS.gene82471.t1 AT1G21890 35.769 260 160 2 33 291 88 341 2.90e-39 143
MS.gene82471.t1 AT1G44800 33.074 257 156 3 33 288 88 329 8.78e-39 141
MS.gene82471.t1 AT4G08300 32.184 261 164 3 33 292 88 336 3.20e-36 134
MS.gene82471.t1 AT2G39510 32.558 258 157 4 33 288 85 327 6.53e-35 131
MS.gene82471.t1 AT3G30340 29.455 275 173 5 34 307 89 343 1.32e-34 130
MS.gene82471.t1 AT3G28050 30.855 269 158 7 22 287 83 326 1.61e-34 129
MS.gene82471.t1 AT4G01440 29.804 255 163 3 33 286 87 326 5.89e-34 128
MS.gene82471.t1 AT1G09380 30.980 255 162 3 32 284 84 326 1.69e-33 127
MS.gene82471.t1 AT1G11460 30.888 259 162 4 34 290 94 337 2.48e-33 125
MS.gene82471.t1 AT5G07050 30.418 263 171 4 33 292 95 348 3.80e-33 127
MS.gene82471.t1 AT1G01070 30.038 263 168 4 34 294 47 295 6.04e-33 124
MS.gene82471.t1 AT4G08290 30.980 255 160 5 39 291 96 336 1.15e-32 125
MS.gene82471.t1 AT1G01070 30.038 263 168 4 34 294 94 342 1.71e-32 124
MS.gene82471.t1 AT5G40240 30.690 290 178 7 22 309 91 359 3.00e-32 124
MS.gene82471.t1 AT5G40240 30.690 290 178 7 22 309 91 359 3.00e-32 124
MS.gene82471.t1 AT5G40240 30.690 290 178 7 22 309 105 373 3.79e-32 124
MS.gene82471.t1 AT2G40900 30.469 256 157 5 33 287 88 323 4.53e-32 124
MS.gene82471.t1 AT1G11450 29.044 272 175 4 34 303 2 257 8.58e-32 120
MS.gene82471.t1 AT1G11450 29.151 271 174 4 34 302 43 297 2.90e-31 119
MS.gene82471.t1 AT1G11450 29.151 271 174 4 34 302 50 304 4.07e-31 119
MS.gene82471.t1 AT1G11450 29.885 261 165 4 34 292 94 338 5.42e-31 120
MS.gene82471.t1 AT2G37460 32.296 257 155 4 33 287 92 331 1.06e-30 119
MS.gene82471.t1 AT3G53210 32.609 184 109 3 33 215 87 256 1.15e-30 117
MS.gene82471.t1 AT4G01430 30.038 263 168 4 34 293 87 336 5.26e-30 117
MS.gene82471.t1 AT4G01440 28.139 231 150 3 57 286 3 218 1.01e-28 111
MS.gene82471.t1 AT4G01440 28.139 231 150 3 57 286 3 218 1.01e-28 111
MS.gene82471.t1 AT4G01440 29.060 234 150 3 33 265 87 305 1.05e-28 113
MS.gene82471.t1 AT1G21890 33.761 234 148 3 33 265 88 315 7.86e-28 111
MS.gene82471.t1 AT3G28130 29.365 252 162 4 38 287 9 246 1.78e-27 108
MS.gene82471.t1 AT3G28130 29.365 252 162 4 38 287 9 246 1.78e-27 108
MS.gene82471.t1 AT3G28100 28.044 271 178 5 39 307 97 352 1.52e-26 108
MS.gene82471.t1 AT3G28130 28.364 275 178 5 39 311 96 353 1.56e-26 108
MS.gene82471.t1 AT3G56620 28.854 253 160 4 33 284 88 321 1.59e-26 108
MS.gene82471.t1 AT5G13670 26.641 259 173 5 33 288 85 329 3.72e-26 107
MS.gene82471.t1 AT5G40230 30.000 270 167 7 40 305 105 356 1.09e-25 105
MS.gene82471.t1 AT3G28070 25.912 274 181 4 39 308 8 263 5.04e-25 102
MS.gene82471.t1 AT3G28070 25.912 274 181 4 39 308 100 355 1.94e-24 102
MS.gene82471.t1 AT4G15540 29.323 266 155 6 24 287 90 324 1.23e-23 99.8
MS.gene82471.t1 AT4G15540 29.323 266 155 6 24 287 90 324 1.23e-23 99.8
MS.gene82471.t1 AT1G25270 26.692 266 179 4 34 297 81 332 1.39e-23 99.8
MS.gene82471.t1 AT1G11450 28.632 234 149 4 34 265 94 311 2.46e-23 98.6
MS.gene82471.t1 AT2G37450 29.286 280 170 5 34 311 66 319 3.02e-23 98.6
MS.gene82471.t1 AT5G64700 30.000 260 161 4 39 291 91 336 3.98e-23 98.6
MS.gene82471.t1 AT4G01430 28.936 235 151 4 34 265 87 308 1.65e-22 96.3
MS.gene82471.t1 AT3G28080 26.394 269 181 5 39 305 8 261 1.79e-22 95.1
MS.gene82471.t1 AT3G28080 26.394 269 181 5 39 305 8 261 1.79e-22 95.1
MS.gene82471.t1 AT3G28080 26.394 269 181 5 39 305 8 261 1.79e-22 95.1
MS.gene82471.t1 AT3G28080 26.394 269 181 5 39 305 8 261 1.79e-22 95.1
MS.gene82471.t1 AT1G68170 26.217 267 182 4 34 298 91 344 3.65e-22 95.9
MS.gene82471.t1 AT5G40210 26.923 260 158 4 34 292 91 319 3.78e-22 95.5
MS.gene82471.t1 AT1G68170 26.217 267 182 4 34 298 81 334 4.93e-22 95.5
MS.gene82471.t1 AT3G28080 26.394 269 181 5 39 305 89 342 7.16e-22 95.1
MS.gene82471.t1 AT3G28080 26.394 269 181 5 39 305 97 350 7.19e-22 95.1
MS.gene82471.t1 AT2G37450 28.571 273 167 5 41 311 1 247 1.23e-21 92.8
MS.gene82471.t1 AT1G70260 24.436 266 176 4 30 287 89 337 4.38e-21 93.2
MS.gene82471.t1 AT1G43650 26.809 235 153 4 56 289 107 323 1.00e-20 91.7
MS.gene82471.t1 AT4G01440 29.891 184 113 3 33 215 87 255 1.03e-20 90.5
MS.gene82471.t1 AT4G01430 27.488 211 138 3 84 292 1 198 3.60e-20 87.8
MS.gene82471.t1 AT4G28040 27.863 262 155 7 33 288 87 320 5.40e-20 89.7
MS.gene82471.t1 AT4G28040 27.863 262 155 7 33 288 87 320 5.40e-20 89.7
MS.gene82471.t1 AT4G28040 27.863 262 155 7 33 288 87 320 5.40e-20 89.7
MS.gene82471.t1 AT4G28040 27.863 262 155 7 33 288 87 320 5.40e-20 89.7
MS.gene82471.t1 AT4G28040 27.863 262 155 7 33 288 87 320 5.40e-20 89.7
MS.gene82471.t1 AT3G28130 27.727 220 143 4 70 287 2 207 3.83e-19 85.1
MS.gene82471.t1 AT3G28070 25.108 231 153 3 39 265 100 314 2.61e-17 81.6
MS.gene82471.t1 AT5G47470 28.000 275 164 9 34 302 137 383 3.39e-17 82.0
MS.gene82471.t1 AT5G47470 28.000 275 164 9 34 302 109 355 3.50e-17 81.6
MS.gene82471.t1 AT5G47470 28.846 260 155 8 34 287 137 372 3.67e-17 82.0
MS.gene82471.t1 AT3G28070 24.280 243 162 4 70 308 2 226 5.50e-17 79.3
MS.gene82471.t1 AT3G28080 25.843 267 131 5 39 305 8 207 7.07e-17 78.6
MS.gene82471.t1 AT3G28080 25.818 275 133 6 39 309 97 304 2.43e-16 78.6
MS.gene82471.t1 AT4G08290 29.940 167 102 4 39 204 96 248 3.78e-16 77.8
MS.gene82471.t1 AT2G37450 30.769 169 105 4 145 311 122 280 5.21e-16 77.8
MS.gene82471.t1 AT4G01450 28.030 264 167 4 28 287 79 323 4.73e-15 75.5
MS.gene82471.t1 AT4G01450 27.273 242 153 3 28 265 79 301 7.19e-15 74.7
MS.gene82471.t1 AT3G30340 25.269 186 118 4 34 215 89 257 5.05e-14 71.6
MS.gene82471.t1 AT3G28080 23.950 238 164 5 70 305 2 224 2.90e-13 68.6
MS.gene82471.t1 AT3G28100 29.496 139 85 2 39 177 97 222 9.99e-12 64.7
MS.gene82471.t1 AT3G28130 28.758 153 95 3 39 191 96 234 1.35e-11 64.3
MS.gene82471.t1 AT4G01450 28.125 192 115 4 28 215 79 251 7.50e-11 62.0

Find 92 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATTCATGACCAGGATATT+TGG 0.198843 5.2:-15973427 MS.gene82471:intron
GGAACACTTATCTGTGTTTC+TGG 0.207539 5.2:-15973131 MS.gene82471:CDS
ACGTGGTGTAACAAGATATT+AGG 0.211603 5.2:-15971820 MS.gene82471:CDS
ATGGTTTGTCGGTGGTTTAC+TGG 0.233756 5.2:-15973000 MS.gene82471:CDS
CTATACCTGCCCAAGTAAAT+TGG 0.258373 5.2:+15971721 None:intergenic
GTCGGTGGTTTACTGGATCT+TGG 0.266928 5.2:-15972993 MS.gene82471:CDS
CCAAAGTCAGCAGCTGATTA+AGG 0.277990 5.2:-15971038 None:intergenic
CTTGGGGTTCTGTGCTTGAT+AGG 0.288261 5.2:-15972954 MS.gene82471:CDS
CGAGGTCAGCCCGAACCTTC+TGG 0.291645 5.2:-15973023 MS.gene82471:CDS
GAAGGTTTGGCAAAGGTTCT+AGG 0.298234 5.2:-15973152 MS.gene82471:CDS
TATCATTGCTGGTCTATATA+CGG 0.310080 5.2:-15971189 MS.gene82471:CDS
CCTCGGAAGTCCAATTTACT+TGG 0.314459 5.2:-15971731 MS.gene82471:CDS
ATTGCATCTGCCCTTAACTA+TGG 0.314928 5.2:-15971850 MS.gene82471:CDS
GCCTGGATCCGGTGGCCGTT+GGG 0.317905 5.2:-15975646 MS.gene82471:CDS
CTTCTTCGGAGCTGCTTTGA+TGG 0.321252 5.2:-15972714 MS.gene82471:CDS
GGAGGATCATTTATCATTGC+TGG 0.344731 5.2:-15971200 MS.gene82471:CDS
GCGAAACAAAACCATCAAAA+TGG 0.344773 5.2:+15973106 None:intergenic
AACCAGCTTCTGTTTCTCAT+TGG 0.350664 5.2:-15973403 MS.gene82471:CDS
CCATGTGACAACAGCATCAT+AGG 0.361666 5.2:-15971221 MS.gene82471:intron
TTTCGCGGTCCAATTGTGAT+AGG 0.368661 5.2:-15973089 MS.gene82471:CDS
CTGGTCTATATACGGTTACT+TGG 0.374907 5.2:-15971181 MS.gene82471:CDS
CCTTAATCAGCTGCTGACTT+TGG 0.389480 5.2:+15971038 None:intergenic
TCTGAATACCCTATCACAAT+TGG 0.394884 5.2:+15973080 None:intergenic
ACGTAATGAGTCCATAGTTA+AGG 0.403329 5.2:+15971839 None:intergenic
TCGGTGGTTTACTGGATCTT+GGG 0.408579 5.2:-15972992 MS.gene82471:CDS
CCGAGACAGTAGGGCAGAAA+AGG 0.413724 5.2:+15971759 None:intergenic
GACAAACCATCCAGAAGGTT+CGG 0.413873 5.2:+15973013 None:intergenic
GAACCTTCTGGATGGTTTGT+CGG 0.422643 5.2:-15973011 MS.gene82471:CDS
TGCCTGGATCCGGTGGCCGT+TGG 0.423404 5.2:-15975647 MS.gene82471:CDS
CAAGATATTAGGGCCAGCTT+TGG 0.426421 5.2:-15971809 MS.gene82471:CDS
TTGTATAGGGCAACCAAAGC+TGG 0.430532 5.2:+15971796 None:intergenic
ACAGAACCCCAAGATGAAAA+TGG 0.432786 5.2:+15972964 None:intergenic
CGTGGTGTAACAAGATATTA+GGG 0.440850 5.2:-15971819 MS.gene82471:CDS
CGCCTATCAATGCCTGGATC+CGG 0.440976 5.2:-15975657 MS.gene82471:CDS
TCCCAACGGCCACCGGATCC+AGG 0.443691 5.2:+15975645 None:intergenic
GCTGTGACAGATAAGTTTGC+AGG 0.444234 5.2:+15972746 None:intergenic
AGGTTGAAGTGGATTGTATA+GGG 0.446710 5.2:+15971783 None:intergenic
CAGGTTGAAGTGGATTGTAT+AGG 0.450004 5.2:+15971782 None:intergenic
CTTGCTCAGATATGAAGGTT+TGG 0.451283 5.2:-15973165 MS.gene82471:CDS
TTGGGGTTCTGTGCTTGATA+GGG 0.457988 5.2:-15972953 MS.gene82471:CDS
GAGCCATTGGAGAGGATTCA+AGG 0.458717 5.2:-15975609 MS.gene82471:intron
CCACTCATCCATGACAAGAT+AGG 0.458997 5.2:-15971098 MS.gene82471:CDS
GGCATTACTAATGGAGCCAT+TGG 0.460071 5.2:-15975622 MS.gene82471:CDS
TGGTCTATATACGGTTACTT+GGG 0.468886 5.2:-15971180 MS.gene82471:CDS
TTGGAGTTGTTCCTCATGGA+TGG 0.470752 5.2:-15971130 MS.gene82471:CDS
ACAAACCATCCAGAAGGTTC+GGG 0.472864 5.2:+15973014 None:intergenic
GTGAACTTGCTCAGATATGA+AGG 0.474822 5.2:-15973170 MS.gene82471:CDS
CACCGGATCCAGGCATTGAT+AGG 0.476179 5.2:+15975655 None:intergenic
GAAGTCCAATTTACTTGGGC+AGG 0.483926 5.2:-15971726 MS.gene82471:intron
ACAGCATATTCATACTTCTT+CGG 0.486713 5.2:-15972728 MS.gene82471:CDS
GATAGGGAACTGCATGTGTA+TGG 0.487050 5.2:-15972937 MS.gene82471:CDS
CCGTTGGGAGGCATTACTAA+TGG 0.507046 5.2:-15975631 MS.gene82471:CDS
TAATGCCTCCCAACGGCCAC+CGG 0.510794 5.2:+15975638 None:intergenic
CGTAATGAGTCCATAGTTAA+GGG 0.511891 5.2:+15971840 None:intergenic
TTCGCGGTCCAATTGTGATA+GGG 0.519702 5.2:-15973088 MS.gene82471:CDS
GACAGTAGGGCAGAAAAGGC+AGG 0.520292 5.2:+15971763 None:intergenic
GAGAGTGATGGAGGGGCGAA+TGG 0.529156 5.2:-15975680 None:intergenic
CTACTGTCTCGGATGTTCCT+CGG 0.534842 5.2:-15971748 MS.gene82471:CDS
AGAGAGAGACATGCAACAGT+TGG 0.538236 5.2:-15971149 MS.gene82471:CDS
CTTCGGAGCTGCTTTGATGG+TGG 0.544048 5.2:-15972711 MS.gene82471:CDS
AATGTAAAGACTGGAATGGC+AGG 0.544119 5.2:+15973340 None:intergenic
AAATTTGACCTATCTTGTCA+TGG 0.545809 5.2:+15971090 None:intergenic
CGAGGAACATCCGAGACAGT+AGG 0.547002 5.2:+15971749 None:intergenic
TGGAGTTGTTCCTCATGGAT+GGG 0.553300 5.2:-15971129 MS.gene82471:CDS
CTCGGAAGTCCAATTTACTT+GGG 0.554258 5.2:-15971730 MS.gene82471:CDS
CCTTCTGGATGGTTTGTCGG+TGG 0.554704 5.2:-15973008 MS.gene82471:CDS
GCCGTTGGAGAGTGATGGAG+GGG 0.558665 5.2:-15975687 None:intergenic
GCAGAAAAGGCAGGTTGAAG+TGG 0.559382 5.2:+15971772 None:intergenic
TGGATCCGGTGGCCGTTGGG+AGG 0.559837 5.2:-15975643 MS.gene82471:CDS
AGCCGTTGGAGAGTGATGGA+GGG 0.560669 5.2:-15975688 None:intergenic
AACCAATGAGAAACAGAAGC+TGG 0.564227 5.2:+15973401 None:intergenic
GAATGGCGCCTATCAATGCC+TGG 0.569949 5.2:-15975663 MS.gene82471:CDS
CAACCTTGAATCCTCTCCAA+TGG 0.570606 5.2:+15975606 None:intergenic
CAGATATGAAGGTTTGGCAA+AGG 0.580184 5.2:-15973159 MS.gene82471:CDS
GAGGAACATCCGAGACAGTA+GGG 0.581948 5.2:+15971750 None:intergenic
ACAGTTGGAGTTGTTCCTCA+TGG 0.587756 5.2:-15971134 MS.gene82471:CDS
CCTATCTTGTCATGGATGAG+TGG 0.588423 5.2:+15971098 None:intergenic
TGTGTGGCAGCAGCATAAGT+TGG 0.589314 5.2:+15973364 None:intergenic
CTATCAATGCCTGGATCCGG+TGG 0.599946 5.2:-15975654 MS.gene82471:CDS
GTCAGCCCGAACCTTCTGGA+TGG 0.607280 5.2:-15973019 MS.gene82471:CDS
TGACTAATGAGTCAACTGAC+TGG 0.607872 5.2:-15972673 MS.gene82471:CDS
TACTAATGGAGCCATTGGAG+AGG 0.613460 5.2:-15975617 MS.gene82471:CDS
TGTGACAACAGCATCATAGG+AGG 0.629732 5.2:-15971218 MS.gene82471:intron
CCAAGTAAATTGGACTTCCG+AGG 0.630840 5.2:+15971731 None:intergenic
CGTAATGAAATTAGTGCGCG+AGG 0.640166 5.2:-15973041 MS.gene82471:CDS
TTAACTATGGACTCATTACG+TGG 0.641801 5.2:-15971837 MS.gene82471:CDS
TGGACTTGCAGATAGACTAG+AGG 0.650744 5.2:+15971058 None:intergenic
CCACCGACAAACCATCCAGA+AGG 0.651445 5.2:+15973008 None:intergenic
GGTCTATATACGGTTACTTG+GGG 0.651801 5.2:-15971179 MS.gene82471:CDS
GACTGGAATGGCAGGCTGTG+TGG 0.668414 5.2:+15973348 None:intergenic
CCATTAGTAATGCCTCCCAA+CGG 0.677739 5.2:+15975631 None:intergenic
GGTTCAGCTTCCCATCCATG+AGG 0.735938 5.2:+15971119 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTATTAATAAACTTATA+CGG - chr5.2:15973460-15973479 MS.gene82471:intron 10.0%
!! TATATATTTGAGTAATAAAT+GGG + chr5.2:15971328-15971347 None:intergenic 10.0%
!! TTAACTATTTGTAAATTATT+TGG - chr5.2:15974387-15974406 MS.gene82471:intron 10.0%
!! TTATATATTTGAGTAATAAA+TGG + chr5.2:15971329-15971348 None:intergenic 10.0%
!! AACATCATAAAATATAGTAA+GGG + chr5.2:15971748-15971767 None:intergenic 15.0%
!! ATATTACTATATTAAATTGC+CGG - chr5.2:15974180-15974199 MS.gene82471:intron 15.0%
!!! ATTTTCATTTATTTTGTTCA+GGG - chr5.2:15974836-15974855 MS.gene82471:intron 15.0%
!!! CTACAATTTTTTTAAGATTA+GGG - chr5.2:15971586-15971605 MS.gene82471:intron 15.0%
!!! GGTTTTAAAAAAAAAAACAA+GGG + chr5.2:15972731-15972750 None:intergenic 15.0%
!!! TATTTTCATTTATTTTGTTC+AGG - chr5.2:15974835-15974854 MS.gene82471:intron 15.0%
!!! TGGTTTTAAAAAAAAAAACA+AGG + chr5.2:15972732-15972751 None:intergenic 15.0%
!!! TGTTTTTTTTTTTAAAACCA+AGG - chr5.2:15972732-15972751 MS.gene82471:CDS 15.0%
!! AATCTAACATTAACAAAATG+TGG - chr5.2:15975083-15975102 MS.gene82471:intron 20.0%
!! AATGAATAACATCAAACTAA+AGG + chr5.2:15971884-15971903 None:intergenic 20.0%
!! ATGCATATATATCATAAAAG+TGG + chr5.2:15971967-15971986 None:intergenic 20.0%
!! CAACATCATAAAATATAGTA+AGG + chr5.2:15971749-15971768 None:intergenic 20.0%
!! CCTAATCTTAAAAAAATTGT+AGG + chr5.2:15971588-15971607 None:intergenic 20.0%
!! GAAAAAAAACTAATGTGAAA+AGG + chr5.2:15971778-15971797 None:intergenic 20.0%
!! TATGTTGCAATTAACTAAAA+TGG + chr5.2:15974226-15974245 None:intergenic 20.0%
!! TTTATGATATATATGCATAG+CGG - chr5.2:15971969-15971988 MS.gene82471:intron 20.0%
!!! AATATGAACCTTTTAGAAAA+GGG - chr5.2:15975175-15975194 MS.gene82471:intron 20.0%
!!! ACTTTTCAAAGTTTTAACAA+TGG - chr5.2:15974331-15974350 MS.gene82471:intron 20.0%
!!! AGTAATGACATTTTGATATA+AGG + chr5.2:15975383-15975402 None:intergenic 20.0%
!!! ATTTTCTGAAACAATTTTAC+TGG - chr5.2:15975127-15975146 MS.gene82471:intron 20.0%
!!! CCTACAATTTTTTTAAGATT+AGG - chr5.2:15971585-15971604 MS.gene82471:intron 20.0%
!!! CTTTTTGAAAACCATATTAT+TGG - chr5.2:15971797-15971816 MS.gene82471:CDS 20.0%
!!! GTAATGACATTTTGATATAA+GGG + chr5.2:15975382-15975401 None:intergenic 20.0%
!!! GTTTACCTTATTTTTTATCA+GGG - chr5.2:15971542-15971561 MS.gene82471:intron 20.0%
!!! TAATATGAACCTTTTAGAAA+AGG - chr5.2:15975174-15975193 MS.gene82471:intron 20.0%
!!! TAATGACATTTTGATATAAG+GGG + chr5.2:15975381-15975400 None:intergenic 20.0%
!!! TGTTTACCTTATTTTTTATC+AGG - chr5.2:15971541-15971560 MS.gene82471:intron 20.0%
!!! TTTTATTTTTGATTGACTGT+TGG - chr5.2:15974354-15974373 MS.gene82471:intron 20.0%
! AAATGCATACTACAAAAAAG+AGG + chr5.2:15975422-15975441 None:intergenic 25.0%
! AACTATCAAGTTAACTTCAA+CGG + chr5.2:15975216-15975235 None:intergenic 25.0%
! AATTGTTTCAGAAAATGAAG+TGG + chr5.2:15975123-15975142 None:intergenic 25.0%
! AGTAATAAATGGGAAGTTAT+GGG + chr5.2:15971318-15971337 None:intergenic 25.0%
! AGTTTCTGATTATTGAAAGA+GGG + chr5.2:15971371-15971390 None:intergenic 25.0%
! ATATACAGAGTAGTTAATAG+CGG + chr5.2:15972916-15972935 None:intergenic 25.0%
! CATAATTAAATGTACATAGC+AGG + chr5.2:15972980-15972999 None:intergenic 25.0%
! CCAACATTTCAAATTTAGTA+TGG + chr5.2:15974477-15974496 None:intergenic 25.0%
! CCACAAAAACAACAAAAATA+AGG - chr5.2:15972341-15972360 MS.gene82471:intron 25.0%
! CTGCATTAAAAAGTTCATTA+AGG + chr5.2:15973513-15973532 None:intergenic 25.0%
! TAAAAAGATGCATACTTGTA+TGG + chr5.2:15973814-15973833 None:intergenic 25.0%
! TAGTTTCTGATTATTGAAAG+AGG + chr5.2:15971372-15971391 None:intergenic 25.0%
! TCATAAGCAATTACTGATAA+AGG + chr5.2:15974146-15974165 None:intergenic 25.0%
! TCATTGATAAACATTACCAT+AGG + chr5.2:15971413-15971432 None:intergenic 25.0%
! TCGTAAAAGTTATGAAATAG+CGG + chr5.2:15972080-15972099 None:intergenic 25.0%
! TCTTCATAGCAACAAAAAAT+TGG + chr5.2:15975255-15975274 None:intergenic 25.0%
! TTAACTACTCTGTATATATG+TGG - chr5.2:15972919-15972938 MS.gene82471:CDS 25.0%
! TTAGTATGGAGATAGAAAAT+AGG + chr5.2:15974463-15974482 None:intergenic 25.0%
! TTTCACGTAAAATGAAATAG+CGG - chr5.2:15972767-15972786 MS.gene82471:CDS 25.0%
!! ATATTTAAAACTCCAGCATT+TGG + chr5.2:15974420-15974439 None:intergenic 25.0%
!! ATTTTTGTTCGCTGTAATTA+TGG - chr5.2:15973393-15973412 MS.gene82471:CDS 25.0%
!! CCATACTAAATTTGAAATGT+TGG - chr5.2:15974474-15974493 MS.gene82471:intron 25.0%
!! TATCACCGTTAATTATTTTC+AGG - chr5.2:15973924-15973943 MS.gene82471:intron 25.0%
!! TCAGTAATTGCTTATGATTT+TGG - chr5.2:15974149-15974168 MS.gene82471:intron 25.0%
!! TTACCTCGTTTAGATTATTT+TGG - chr5.2:15974783-15974802 MS.gene82471:intron 25.0%
!! TTTTTGTTCGCTGTAATTAT+GGG - chr5.2:15973394-15973413 MS.gene82471:CDS 25.0%
!!! AAGATAGGTCAAATTTTTTC+AGG - chr5.2:15975630-15975649 MS.gene82471:CDS 25.0%
!!! AATGCTGGAGTTTTAAATAT+TGG - chr5.2:15974420-15974439 MS.gene82471:intron 25.0%
!!! AGATAGGTCAAATTTTTTCA+GGG - chr5.2:15975631-15975650 MS.gene82471:CDS 25.0%
!!! ATTTTTTTAAGATTAGGGTG+TGG - chr5.2:15971591-15971610 MS.gene82471:intron 25.0%
!!! CCTTATTTTTGTTGTTTTTG+TGG + chr5.2:15972344-15972363 None:intergenic 25.0%
!!! GCAGGATATTTTTTTAATAC+TGG + chr5.2:15973952-15973971 None:intergenic 25.0%
!!! TATTTTTGATCATACCATGA+TGG - chr5.2:15973102-15973121 MS.gene82471:CDS 25.0%
!!! TTTTTTTAAGATTAGGGTGT+GGG - chr5.2:15971592-15971611 MS.gene82471:intron 25.0%
AAATTTGACCTATCTTGTCA+TGG + chr5.2:15975626-15975645 None:intergenic 30.0%
AACGCATTTCTCTCAAAAAA+CGG + chr5.2:15972618-15972637 None:intergenic 30.0%
ACAGCATATTCATACTTCTT+CGG - chr5.2:15973985-15974004 MS.gene82471:intron 30.0%
AGAGAGAAACTGAAGTTATT+AGG - chr5.2:15972682-15972701 MS.gene82471:CDS 30.0%
ATAAGATCAAAAGCAAGTGA+TGG - chr5.2:15971457-15971476 MS.gene82471:intron 30.0%
ATGCAAGATTGTTAAATGGA+GGG - chr5.2:15974713-15974732 MS.gene82471:intron 30.0%
ATTTAACAATCTTGCATCAC+AGG + chr5.2:15974710-15974729 None:intergenic 30.0%
CAAAAATGTAAAGACTGGAA+TGG + chr5.2:15973380-15973399 None:intergenic 30.0%
CATTTGTATGAACCATAGAA+AGG - chr5.2:15974550-15974569 MS.gene82471:intron 30.0%
CTAGATCTCATATTATGTTC+CGG - chr5.2:15971633-15971652 MS.gene82471:intron 30.0%
CTTCCTTCTTTCATTCTTTA+CGG + chr5.2:15972664-15972683 None:intergenic 30.0%
GAATAACATCAAACTAAAGG+TGG + chr5.2:15971881-15971900 None:intergenic 30.0%
GAGAGAAACTGAAGTTATTA+GGG - chr5.2:15972683-15972702 MS.gene82471:CDS 30.0%
GAGTAATAAATGGGAAGTTA+TGG + chr5.2:15971319-15971338 None:intergenic 30.0%
GCTTGGCAATTTAATATCAT+TGG + chr5.2:15972219-15972238 None:intergenic 30.0%
GGAACATAATATGAGATCTA+GGG + chr5.2:15971634-15971653 None:intergenic 30.0%
GGCAATTTAATATCATTGGA+AGG + chr5.2:15972215-15972234 None:intergenic 30.0%
GGTTATTTGGACTAAGATTT+GGG + chr5.2:15971266-15971285 None:intergenic 30.0%
TAAACTTATACGGATAAACC+AGG - chr5.2:15973470-15973489 MS.gene82471:intron 30.0%
TAAATGTACATAGCAGGTAT+TGG + chr5.2:15972974-15972993 None:intergenic 30.0%
TACAAAGAAATGTTCCAAAC+CGG + chr5.2:15971655-15971674 None:intergenic 30.0%
TCATTCTCACATAATGATGT+AGG - chr5.2:15974281-15974300 MS.gene82471:intron 30.0%
TCCAACCCTGATAAAAAATA+AGG + chr5.2:15971550-15971569 None:intergenic 30.0%
TCTTCTTTCTTGGATTAACT+GGG - chr5.2:15973172-15973191 MS.gene82471:CDS 30.0%
TGAAAATACAAGATTCTCCT+TGG + chr5.2:15972752-15972771 None:intergenic 30.0%
TGGTGCCTGAAAATAATTAA+CGG + chr5.2:15973932-15973951 None:intergenic 30.0%
TGGTTATTTGGACTAAGATT+TGG + chr5.2:15971267-15971286 None:intergenic 30.0%
TGTGATGCAAGATTGTTAAA+TGG - chr5.2:15974709-15974728 MS.gene82471:intron 30.0%
TGTTTATGAACAAAACAGAG+AGG - chr5.2:15972466-15972485 MS.gene82471:intron 30.0%
TTACTGTGATTTCTGTGATA+AGG + chr5.2:15972170-15972189 None:intergenic 30.0%
TTCTTCTTTCTTGGATTAAC+TGG - chr5.2:15973171-15973190 MS.gene82471:CDS 30.0%
TTTATGAACAAGCAGAATAG+AGG - chr5.2:15972415-15972434 MS.gene82471:intron 30.0%
! GCTATCAATTATTGACTGTT+TGG - chr5.2:15974249-15974268 MS.gene82471:intron 30.0%
! GTAACAAACTTGTTCTGAAT+TGG + chr5.2:15971201-15971220 None:intergenic 30.0%
! TATCATTGCTGGTCTATATA+CGG - chr5.2:15975524-15975543 MS.gene82471:intron 30.0%
! TTCGTGACTTTTGTCAATAA+GGG + chr5.2:15974611-15974630 None:intergenic 30.0%
! TTTCGTGACTTTTGTCAATA+AGG + chr5.2:15974612-15974631 None:intergenic 30.0%
! TTTTATCAGGGTTGGATTAT+GGG - chr5.2:15971554-15971573 MS.gene82471:intron 30.0%
! TTTTGTTCGCTGTAATTATG+GGG - chr5.2:15973395-15973414 MS.gene82471:CDS 30.0%
! TTTTTATCAGGGTTGGATTA+TGG - chr5.2:15971553-15971572 MS.gene82471:intron 30.0%
!! AATCTTTTTATTGACTGCTG+TGG - chr5.2:15973250-15973269 MS.gene82471:intron 30.0%
!! CGGAGACTGATTTTAAATTT+CGG + chr5.2:15974113-15974132 None:intergenic 30.0%
!! CTGAAACAATTTTACTGGTT+AGG - chr5.2:15975132-15975151 MS.gene82471:intron 30.0%
!! TTTTGAGAGAAATGCGTTTT+GGG - chr5.2:15972620-15972639 MS.gene82471:intron 30.0%
!! TTTTTGAGAGAAATGCGTTT+TGG - chr5.2:15972619-15972638 MS.gene82471:intron 30.0%
!!! ACCTTATTTTTTATCAGGGT+TGG - chr5.2:15971546-15971565 MS.gene82471:intron 30.0%
!!! ATTTTGATGGTTTTGTTTCG+CGG - chr5.2:15973609-15973628 MS.gene82471:intron 30.0%
AAATGGGAAGTTATGGGAAA+AGG + chr5.2:15971312-15971331 None:intergenic 35.0%
AACAATGCAATCAGACTTAG+AGG + chr5.2:15973060-15973079 None:intergenic 35.0%
AAGACACCAATTGGGAATTA+CGG + chr5.2:15972119-15972138 None:intergenic 35.0%
AATGGGAAGTTATGGGAAAA+GGG + chr5.2:15971311-15971330 None:intergenic 35.0%
ACAATGCAATCAGACTTAGA+GGG + chr5.2:15973059-15973078 None:intergenic 35.0%
ACGTAATGAGTCCATAGTTA+AGG + chr5.2:15974877-15974896 None:intergenic 35.0%
ACGTGGTGTAACAAGATATT+AGG - chr5.2:15974893-15974912 MS.gene82471:intron 35.0%
ACTGGTTAGGACTTTACAAA+GGG - chr5.2:15975145-15975164 MS.gene82471:intron 35.0%
AGGCTTCTAATATGGTCTAA+TGG + chr5.2:15975358-15975377 None:intergenic 35.0%
AGTTTGATTGTTAGCAGCAT+AGG - chr5.2:15972948-15972967 MS.gene82471:CDS 35.0%
ATAGAGGATGAACAAAACAG+AGG - chr5.2:15972431-15972450 MS.gene82471:intron 35.0%
ATAGAGGATGAACAAATCAG+AGG - chr5.2:15972378-15972397 MS.gene82471:intron 35.0%
ATTTGGACTAAGATTTGGGA+GGG + chr5.2:15971262-15971281 None:intergenic 35.0%
CAAGAAAGAAGAATGATGTC+AGG + chr5.2:15973164-15973183 None:intergenic 35.0%
CATGTGCTCAAAGACATAAA+CGG + chr5.2:15972263-15972282 None:intergenic 35.0%
CCACCAAAATAATCTAAACG+AGG + chr5.2:15974789-15974808 None:intergenic 35.0%
CGGAACATAATATGAGATCT+AGG + chr5.2:15971635-15971654 None:intergenic 35.0%
CGTAATGAGTCCATAGTTAA+GGG + chr5.2:15974876-15974895 None:intergenic 35.0%
CGTGGTGTAACAAGATATTA+GGG - chr5.2:15974894-15974913 MS.gene82471:intron 35.0%
CTGACATCATTCTTCTTTCT+TGG - chr5.2:15973162-15973181 MS.gene82471:CDS 35.0%
CTGATAAAGGTTCCTGAAAT+CGG + chr5.2:15974133-15974152 None:intergenic 35.0%
CTTCTAATATGGTCTAATGG+TGG + chr5.2:15975355-15975374 None:intergenic 35.0%
GATACTTCGCACCAATAATA+TGG + chr5.2:15971811-15971830 None:intergenic 35.0%
GATGATATCACACTAGCATT+TGG + chr5.2:15974529-15974548 None:intergenic 35.0%
GATGCAAGATTGTTAAATGG+AGG - chr5.2:15974712-15974731 MS.gene82471:intron 35.0%
GCGAAACAAAACCATCAAAA+TGG + chr5.2:15973610-15973629 None:intergenic 35.0%
GCGAACAAAAATGTAAAGAC+TGG + chr5.2:15973385-15973404 None:intergenic 35.0%
GGATAAGGTCTTTGTGAAAT+GGG - chr5.2:15971145-15971164 MS.gene82471:CDS 35.0%
GTATGTATTACTGTATGTCC+TGG + chr5.2:15973491-15973510 None:intergenic 35.0%
TAAAATCAGTCTCCGATTTC+AGG - chr5.2:15974118-15974137 MS.gene82471:intron 35.0%
TATTTGGACTAAGATTTGGG+AGG + chr5.2:15971263-15971282 None:intergenic 35.0%
TCACGAAAAAGTTTCTACCT+TGG - chr5.2:15974624-15974643 MS.gene82471:intron 35.0%
TCTCATATTATGTTCCGGTT+TGG - chr5.2:15971638-15971657 MS.gene82471:intron 35.0%
TCTGAATACCCTATCACAAT+TGG + chr5.2:15973636-15973655 None:intergenic 35.0%
TGATTCATGACCAGGATATT+TGG - chr5.2:15973286-15973305 MS.gene82471:intron 35.0%
TGGATAAGGTCTTTGTGAAA+TGG - chr5.2:15971144-15971163 MS.gene82471:CDS 35.0%
TGGTCTATATACGGTTACTT+GGG - chr5.2:15975533-15975552 MS.gene82471:intron 35.0%
TTAACTATGGACTCATTACG+TGG - chr5.2:15974876-15974895 MS.gene82471:intron 35.0%
TTCACAAAGACCTTATCCAA+CGG + chr5.2:15971143-15971162 None:intergenic 35.0%
TTTAGAAAAGGGAGGTTCAA+TGG - chr5.2:15975186-15975205 MS.gene82471:intron 35.0%
! ACTTTTGTCAATAAGGGCAA+CGG + chr5.2:15974605-15974624 None:intergenic 35.0%
! GAAAAGGGAAGTTGGTTATT+TGG + chr5.2:15971279-15971298 None:intergenic 35.0%
! GGTTTGACCATTTTCATCTT+GGG - chr5.2:15973742-15973761 MS.gene82471:intron 35.0%
! GTTTGACCATTTTCATCTTG+GGG - chr5.2:15973743-15973762 MS.gene82471:intron 35.0%
! TACTGGTTAGGACTTTACAA+AGG - chr5.2:15975144-15975163 MS.gene82471:intron 35.0%
! TATCCCGCTATAGCATTTTT+GGG + chr5.2:15972041-15972060 None:intergenic 35.0%
! TTGAACCTCCCTTTTCTAAA+AGG + chr5.2:15975186-15975205 None:intergenic 35.0%
! TTTGAGAGAAATGCGTTTTG+GGG - chr5.2:15972621-15972640 MS.gene82471:intron 35.0%
!! AGGTTGAAGTGGATTGTATA+GGG + chr5.2:15974933-15974952 None:intergenic 35.0%
!! ATGAACCTTTTAGAAAAGGG+AGG - chr5.2:15975178-15975197 MS.gene82471:intron 35.0%
!! CAACATTTTGAAGACAACTC+CGG + chr5.2:15974202-15974221 None:intergenic 35.0%
!! TATATATGCATAGCGGATAG+CGG - chr5.2:15971976-15971995 MS.gene82471:intron 35.0%
!! TGACATTTTGATATAAGGGG+AGG + chr5.2:15975378-15975397 None:intergenic 35.0%
!!! CCTCGTTTAGATTATTTTGG+TGG - chr5.2:15974786-15974805 MS.gene82471:intron 35.0%
AAAAGGGAAGTTGTGGGAAA+AGG + chr5.2:15971295-15971314 None:intergenic 40.0%
AAAGGGAAGTTGTGGGAAAA+GGG + chr5.2:15971294-15971313 None:intergenic 40.0%
AACCAATGAGAAACAGAAGC+TGG + chr5.2:15973315-15973334 None:intergenic 40.0%
AATGGGTCTGAAGATAACGA+AGG - chr5.2:15971162-15971181 MS.gene82471:CDS 40.0%
AATGTAAAGACTGGAATGGC+AGG + chr5.2:15973376-15973395 None:intergenic 40.0%
ACAGAACCCCAAGATGAAAA+TGG + chr5.2:15973752-15973771 None:intergenic 40.0%
AGAAACTAACCCACTTAGCT+GGG - chr5.2:15971384-15971403 MS.gene82471:intron 40.0%
AGACACCAATTGGGAATTAC+GGG + chr5.2:15972118-15972137 None:intergenic 40.0%
AGAGCAAGAAGACACCAATT+GGG + chr5.2:15972127-15972146 None:intergenic 40.0%
AGCAATGTCGAGATTATCAC+CGG - chr5.2:15972236-15972255 MS.gene82471:intron 40.0%
AGTGGTCTTCAGTTTGTGTA+TGG - chr5.2:15973886-15973905 MS.gene82471:intron 40.0%
ATAACGAAGGACTGAACCTT+GGG - chr5.2:15971175-15971194 MS.gene82471:CDS 40.0%
ATAAGGGGAGGCTTCTAATA+TGG + chr5.2:15975366-15975385 None:intergenic 40.0%
ATTCTCTCACTCGTATGTGA+AGG + chr5.2:15973233-15973252 None:intergenic 40.0%
ATTGCATCTGCCCTTAACTA+TGG - chr5.2:15974863-15974882 MS.gene82471:intron 40.0%
ATTGGAGAGGATTCAAGGTT+GGG - chr5.2:15971109-15971128 MS.gene82471:CDS 40.0%
CACTCGTATGTGAAGGAAAT+AGG + chr5.2:15973226-15973245 None:intergenic 40.0%
CAGATATGAAGGTTTGGCAA+AGG - chr5.2:15973554-15973573 MS.gene82471:intron 40.0%
CATGCATTCTCTATGCTAAC+TGG - chr5.2:15975045-15975064 MS.gene82471:intron 40.0%
CCATATGGCTTATTGCATAG+CGG - chr5.2:15972854-15972873 MS.gene82471:intron 40.0%
CTATACCTGCCCAAGTAAAT+TGG + chr5.2:15974995-15975014 None:intergenic 40.0%
CTCGGAAGTCCAATTTACTT+GGG - chr5.2:15974983-15975002 MS.gene82471:intron 40.0%
CTGGTCTATATACGGTTACT+TGG - chr5.2:15975532-15975551 MS.gene82471:intron 40.0%
CTTGCTCAGATATGAAGGTT+TGG - chr5.2:15973548-15973567 MS.gene82471:intron 40.0%
GAAAGAAGAATGATGTCAGG+AGG + chr5.2:15973161-15973180 None:intergenic 40.0%
GAAGTTACAAACCTGAGGAA+CGG - chr5.2:15972522-15972541 MS.gene82471:intron 40.0%
GGAACACTTATCTGTGTTTC+TGG - chr5.2:15973582-15973601 MS.gene82471:intron 40.0%
GGAGGATCATTTATCATTGC+TGG - chr5.2:15975513-15975532 MS.gene82471:intron 40.0%
GGTCATTGGCAAAAAATCAG+TGG + chr5.2:15971833-15971852 None:intergenic 40.0%
GGTCTATATACGGTTACTTG+GGG - chr5.2:15975534-15975553 MS.gene82471:intron 40.0%
GTCAAGAAGTTACAAACCTG+AGG - chr5.2:15972517-15972536 MS.gene82471:intron 40.0%
GTCAGGAGGTTCTTAGTAAT+GGG + chr5.2:15973147-15973166 None:intergenic 40.0%
GTCTTCAGTTTGTGTATGGT+TGG - chr5.2:15973890-15973909 MS.gene82471:intron 40.0%
GTGATAATCTCGACATTGCT+TGG + chr5.2:15972236-15972255 None:intergenic 40.0%
TAGAGCAAGAAGACACCAAT+TGG + chr5.2:15972128-15972147 None:intergenic 40.0%
TATGGGAAAAGGGAAGTTGT+GGG + chr5.2:15971301-15971320 None:intergenic 40.0%
TCTATACTACTGTCACTCCA+AGG + chr5.2:15974644-15974663 None:intergenic 40.0%
TGACTAATGAGTCAACTGAC+TGG - chr5.2:15974040-15974059 MS.gene82471:intron 40.0%
TGTCAGGAGGTTCTTAGTAA+TGG + chr5.2:15973148-15973167 None:intergenic 40.0%
TTATGGGAAAAGGGAAGTTG+TGG + chr5.2:15971302-15971321 None:intergenic 40.0%
TTCTGTGATAAGGTCAGCAA+TGG + chr5.2:15972160-15972179 None:intergenic 40.0%
TTGCTTTGTGATTCATGACC+AGG - chr5.2:15973278-15973297 MS.gene82471:intron 40.0%
TTTAGAAGAGAGCAAACACG+AGG - chr5.2:15972495-15972514 MS.gene82471:intron 40.0%
TTTCTTGGATTAACTGGGTG+AGG - chr5.2:15973177-15973196 MS.gene82471:CDS 40.0%
! AACCAGCTTCTGTTTCTCAT+TGG - chr5.2:15973310-15973329 MS.gene82471:intron 40.0%
! ATCCCGCTATAGCATTTTTG+GGG + chr5.2:15972040-15972059 None:intergenic 40.0%
! CCAATGACCAATTTTCACCT+GGG - chr5.2:15971844-15971863 MS.gene82471:CDS 40.0%
! CTATCCCGCTATAGCATTTT+TGG + chr5.2:15972042-15972061 None:intergenic 40.0%
! GGGTTTGACCATTTTCATCT+TGG - chr5.2:15973741-15973760 MS.gene82471:intron 40.0%
! GTGAACTTGCTCAGATATGA+AGG - chr5.2:15973543-15973562 MS.gene82471:intron 40.0%
! TTTGGCTCAAAACCAAATGC+TGG - chr5.2:15974405-15974424 MS.gene82471:intron 40.0%
! TTTTGTGGACAACACAGTCA+TGG + chr5.2:15972329-15972348 None:intergenic 40.0%
!! CAGGTTGAAGTGGATTGTAT+AGG + chr5.2:15974934-15974953 None:intergenic 40.0%
!! GATCCAAGCTCTCTAAAACT+TGG + chr5.2:15971236-15971255 None:intergenic 40.0%
!! TGGTCTAATGGTGGATTTCA+TGG + chr5.2:15975346-15975365 None:intergenic 40.0%
!!! AGCATTTGGTTTTGCGCAAT+CGG + chr5.2:15974515-15974534 None:intergenic 40.0%
!!! CTTCCAAGTTTTAGAGAGCT+TGG - chr5.2:15971230-15971249 MS.gene82471:intron 40.0%
!!! TGTTTCTGGTGCCATTTTGA+TGG - chr5.2:15973596-15973615 MS.gene82471:intron 40.0%
!!! TTTTGGGGTGAGAAGATGAA+AGG - chr5.2:15972636-15972655 MS.gene82471:CDS 40.0%
AAAACCGCTATGCAGTGTTG+CGG - chr5.2:15972801-15972820 MS.gene82471:intron 45.0%
AAGCTGGTTGCCAAATATCC+TGG + chr5.2:15973299-15973318 None:intergenic 45.0%
ACAAACCATCCAGAAGGTTC+GGG + chr5.2:15973702-15973721 None:intergenic 45.0%
ACAGTTGGAGTTGTTCCTCA+TGG - chr5.2:15975579-15975598 MS.gene82471:intron 45.0%
AGAAAAGGGAGGTTCAATGG+TGG - chr5.2:15975189-15975208 MS.gene82471:intron 45.0%
AGAGAGAGACATGCAACAGT+TGG - chr5.2:15975564-15975583 MS.gene82471:intron 45.0%
AGTTAATAGCGGCGCTATAG+CGG + chr5.2:15972905-15972924 None:intergenic 45.0%
AGTTGTGGGAAAAGGGAAGT+TGG + chr5.2:15971287-15971306 None:intergenic 45.0%
CAAACTAAAGGTGGTCAGAC+CGG + chr5.2:15971872-15971891 None:intergenic 45.0%
CAACCTTGAATCCTCTCCAA+TGG + chr5.2:15971110-15971129 None:intergenic 45.0%
CAAGATATTAGGGCCAGCTT+TGG - chr5.2:15974904-15974923 MS.gene82471:intron 45.0%
CAGAAACTAACCCACTTAGC+TGG - chr5.2:15971383-15971402 MS.gene82471:intron 45.0%
CATCACCCGTAATTCCCAAT+TGG - chr5.2:15972110-15972129 MS.gene82471:intron 45.0%
CATTGGAGAGGATTCAAGGT+TGG - chr5.2:15971108-15971127 MS.gene82471:CDS 45.0%
CCAAGTAAATTGGACTTCCG+AGG + chr5.2:15974985-15975004 None:intergenic 45.0%
CCACTCATCCATGACAAGAT+AGG - chr5.2:15975615-15975634 MS.gene82471:CDS 45.0%
CCATGTGACAACAGCATCAT+AGG - chr5.2:15975492-15975511 MS.gene82471:intron 45.0%
CCATTAGTAATGCCTCCCAA+CGG + chr5.2:15971085-15971104 None:intergenic 45.0%
CCCAGGTGAAAATTGGTCAT+TGG + chr5.2:15971847-15971866 None:intergenic 45.0%
CCGCTATGCAATAAGCCATA+TGG + chr5.2:15972857-15972876 None:intergenic 45.0%
CCTATCTTGTCATGGATGAG+TGG + chr5.2:15975618-15975637 None:intergenic 45.0%
CCTATGATGCTGTTGTCACA+TGG + chr5.2:15975495-15975514 None:intergenic 45.0%
CCTCGGAAGTCCAATTTACT+TGG - chr5.2:15974982-15975001 MS.gene82471:intron 45.0%
CGACCCCAAAAATGCTATAG+CGG - chr5.2:15972034-15972053 MS.gene82471:intron 45.0%
CGTAATGAAATTAGTGCGCG+AGG - chr5.2:15973672-15973691 MS.gene82471:intron 45.0%
GAAGGTTTGGCAAAGGTTCT+AGG - chr5.2:15973561-15973580 MS.gene82471:intron 45.0%
GAAGTCCAATTTACTTGGGC+AGG - chr5.2:15974987-15975006 MS.gene82471:intron 45.0%
GACAAACCATCCAGAAGGTT+CGG + chr5.2:15973703-15973722 None:intergenic 45.0%
GACCCCAAAAATGCTATAGC+GGG - chr5.2:15972035-15972054 MS.gene82471:intron 45.0%
GATAACGAAGGACTGAACCT+TGG - chr5.2:15971174-15971193 MS.gene82471:CDS 45.0%
GATAGGGAACTGCATGTGTA+TGG - chr5.2:15973776-15973795 MS.gene82471:intron 45.0%
GCAACAACGTGTCCTTTCTA+TGG + chr5.2:15974565-15974584 None:intergenic 45.0%
GCGCCGTAAAGAATGAAAGA+AGG - chr5.2:15972658-15972677 MS.gene82471:CDS 45.0%
GCTCAAAGACATAAACGGAC+CGG + chr5.2:15972258-15972277 None:intergenic 45.0%
GCTGTGACAGATAAGTTTGC+AGG + chr5.2:15973970-15973989 None:intergenic 45.0%
GGAAACAGAGAGCAGAATAG+AGG - chr5.2:15972362-15972381 MS.gene82471:intron 45.0%
GGCATTACTAATGGAGCCAT+TGG - chr5.2:15971091-15971110 MS.gene82471:CDS 45.0%
TACTAATGGAGCCATTGGAG+AGG - chr5.2:15971096-15971115 MS.gene82471:CDS 45.0%
TATCTCAACGCTACGCCATA+TGG - chr5.2:15972839-15972858 MS.gene82471:intron 45.0%
TCGGTGGTTTACTGGATCTT+GGG - chr5.2:15973721-15973740 MS.gene82471:intron 45.0%
TGGACTTGCAGATAGACTAG+AGG + chr5.2:15975658-15975677 None:intergenic 45.0%
TGGAGTTGTTCCTCATGGAT+GGG - chr5.2:15975584-15975603 MS.gene82471:intron 45.0%
TGTGACAACAGCATCATAGG+AGG - chr5.2:15975495-15975514 MS.gene82471:intron 45.0%
TGTGATAAGGTCAGCAATGG+AGG + chr5.2:15972157-15972176 None:intergenic 45.0%
TTCGCGGTCCAATTGTGATA+GGG - chr5.2:15973625-15973644 MS.gene82471:intron 45.0%
TTGGAGTTGTTCCTCATGGA+TGG - chr5.2:15975583-15975602 MS.gene82471:intron 45.0%
TTGGGGTTCTGTGCTTGATA+GGG - chr5.2:15973760-15973779 MS.gene82471:intron 45.0%
TTGTATAGGGCAACCAAAGC+TGG + chr5.2:15974920-15974939 None:intergenic 45.0%
TTTCGCGGTCCAATTGTGAT+AGG - chr5.2:15973624-15973643 MS.gene82471:intron 45.0%
! AAGTGGAAGTCTGAAAGCAC+TGG + chr5.2:15971950-15971969 None:intergenic 45.0%
! ACTTGTTCTGAATTGGCCCA+AGG + chr5.2:15971194-15971213 None:intergenic 45.0%
! AGGAGGTTCTTAGTAATGGG+CGG + chr5.2:15973144-15973163 None:intergenic 45.0%
! ATGGTTTGTCGGTGGTTTAC+TGG - chr5.2:15973713-15973732 MS.gene82471:intron 45.0%
! GAACCTTCTGGATGGTTTGT+CGG - chr5.2:15973702-15973721 MS.gene82471:intron 45.0%
! GCCAATGACCAATTTTCACC+TGG - chr5.2:15971843-15971862 MS.gene82471:CDS 45.0%
!! AGTGGAAGTCTGAAAGCACT+GGG + chr5.2:15971949-15971968 None:intergenic 45.0%
!!! CGCTATAGCATTTTTGGGGT+CGG + chr5.2:15972036-15972055 None:intergenic 45.0%
!! TTTAATATAGTAATATAATA+TGG + chr5.2:15974176-15974195 None:intergenic 5.0%
AACGGCGAGTTCAGTTGCTT+CGG + chr5.2:15974587-15974606 None:intergenic 50.0%
CATAGGAGACCCAGCTAAGT+GGG + chr5.2:15971396-15971415 None:intergenic 50.0%
CTACTGTCTCGGATGTTCCT+CGG - chr5.2:15974965-15974984 MS.gene82471:intron 50.0%
CTTGGGGTTCTGTGCTTGAT+AGG - chr5.2:15973759-15973778 MS.gene82471:intron 50.0%
GAAATAGCGGTCATAGCGCT+AGG + chr5.2:15972067-15972086 None:intergenic 50.0%
GAGCCATTGGAGAGGATTCA+AGG - chr5.2:15971104-15971123 MS.gene82471:CDS 50.0%
GAGGAACATCCGAGACAGTA+GGG + chr5.2:15974966-15974985 None:intergenic 50.0%
GAGGATTCAAGGTTGGGAAG+TGG - chr5.2:15971115-15971134 MS.gene82471:CDS 50.0%
GCGTCAAGCGAACACTTTAG+TGG - chr5.2:15973868-15973887 MS.gene82471:intron 50.0%
GGAAGTGGTTCCGTTGGATA+AGG - chr5.2:15971130-15971149 MS.gene82471:CDS 50.0%
GTCGGTGGTTTACTGGATCT+TGG - chr5.2:15973720-15973739 MS.gene82471:intron 50.0%
GTGTTCGTCTTCAGCCATCA+TGG + chr5.2:15973119-15973138 None:intergenic 50.0%
GTTACAAACCTGAGGAACGG+CGG - chr5.2:15972525-15972544 MS.gene82471:intron 50.0%
TGGCTTATTGCATAGCGGTC+CGG - chr5.2:15972859-15972878 MS.gene82471:intron 50.0%
TGTGTGGCAGCAGCATAAGT+TGG + chr5.2:15973352-15973371 None:intergenic 50.0%
! ACCAATTTTCACCTGGGAGC+CGG - chr5.2:15971850-15971869 MS.gene82471:CDS 50.0%
! ATGGCGTAGCGTTGAGATAG+CGG + chr5.2:15972838-15972857 None:intergenic 50.0%
! CCTTTTCTGCCCTACTGTCT+CGG - chr5.2:15974954-15974973 MS.gene82471:intron 50.0%
! CTTCTTCGGAGCTGCTTTGA+TGG - chr5.2:15973999-15974018 MS.gene82471:intron 50.0%
! GCAGAAAAGGCAGGTTGAAG+TGG + chr5.2:15974944-15974963 None:intergenic 50.0%
! TTGAGATAGCGGCGCAATAG+CGG + chr5.2:15972827-15972846 None:intergenic 50.0%
!! CCGTTGGGAGGCATTACTAA+TGG - chr5.2:15971082-15971101 MS.gene82471:CDS 50.0%
AGGTTGGGAAGTGGTTCCGT+TGG - chr5.2:15971124-15971143 MS.gene82471:CDS 55.0%
CCACCGACAAACCATCCAGA+AGG + chr5.2:15973708-15973727 None:intergenic 55.0%
CCACTTAGCTGGGTCTCCTA+TGG - chr5.2:15971394-15971413 MS.gene82471:intron 55.0%
CCATAGGAGACCCAGCTAAG+TGG + chr5.2:15971397-15971416 None:intergenic 55.0%
CCGAGACAGTAGGGCAGAAA+AGG + chr5.2:15974957-15974976 None:intergenic 55.0%
CGAGGAACATCCGAGACAGT+AGG + chr5.2:15974967-15974986 None:intergenic 55.0%
CGCCTATCAATGCCTGGATC+CGG - chr5.2:15971056-15971075 MS.gene82471:CDS 55.0%
CTATCAATGCCTGGATCCGG+TGG - chr5.2:15971059-15971078 MS.gene82471:CDS 55.0%
GAATGGCGCCTATCAATGCC+TGG - chr5.2:15971050-15971069 MS.gene82471:CDS 55.0%
GACAGTAGGGCAGAAAAGGC+AGG + chr5.2:15974953-15974972 None:intergenic 55.0%
GGTTCAGCTTCCCATCCATG+AGG + chr5.2:15975597-15975616 None:intergenic 55.0%
GTCATGGCAGCATCAGCTTC+TGG + chr5.2:15972313-15972332 None:intergenic 55.0%
TAAGGAACGACGGCGGATGA+CGG - chr5.2:15972551-15972570 MS.gene82471:intron 55.0%
! ACCGGCTCCCAGGTGAAAAT+TGG + chr5.2:15971854-15971873 None:intergenic 55.0%
! CCTTCTGGATGGTTTGTCGG+TGG - chr5.2:15973705-15973724 MS.gene82471:intron 55.0%
! CTTCGGAGCTGCTTTGATGG+TGG - chr5.2:15974002-15974021 MS.gene82471:intron 55.0%
!! CACCGGATCCAGGCATTGAT+AGG + chr5.2:15971061-15971080 None:intergenic 55.0%
!! GCATAGCGGATAGCGGATAG+CGG - chr5.2:15971983-15972002 MS.gene82471:intron 55.0%
ACAAACCTGAGGAACGGCGG+CGG - chr5.2:15972528-15972547 MS.gene82471:intron 60.0%
GACTGGAATGGCAGGCTGTG+TGG + chr5.2:15973368-15973387 None:intergenic 60.0%
GTCAGCCCGAACCTTCTGGA+TGG - chr5.2:15973694-15973713 MS.gene82471:intron 60.0%
TAATGCCTCCCAACGGCCAC+CGG + chr5.2:15971078-15971097 None:intergenic 60.0%
! GGTGCGACGACGGCGTTTTA+CGG - chr5.2:15972572-15972591 MS.gene82471:intron 60.0%
ACGGCGGCGGTAAGGAACGA+CGG - chr5.2:15972541-15972560 MS.gene82471:intron 65.0%
CGAGGTCAGCCCGAACCTTC+TGG - chr5.2:15973690-15973709 MS.gene82471:intron 65.0%
GCGGCCGCAACACTGCATAG+CGG + chr5.2:15972808-15972827 None:intergenic 65.0%
! TAGCGGATAGCGGCGCGTAG+CGG - chr5.2:15971993-15972012 MS.gene82471:intron 65.0%
!! TAGCGGCGCGTAGCGGATAG+CGG - chr5.2:15972000-15972019 MS.gene82471:intron 65.0%
CCTGAGGAACGGCGGCGGTA+AGG - chr5.2:15972533-15972552 MS.gene82471:intron 70.0%
CCTTACCGCCGCCGTTCCTC+AGG + chr5.2:15972536-15972555 None:intergenic 70.0%
GCCTGGATCCGGTGGCCGTT+GGG - chr5.2:15971067-15971086 MS.gene82471:CDS 70.0%
GCGGCGGTAAGGAACGACGG+CGG - chr5.2:15972544-15972563 MS.gene82471:intron 70.0%
TCCCAACGGCCACCGGATCC+AGG + chr5.2:15971071-15971090 None:intergenic 70.0%
TGCCTGGATCCGGTGGCCGT+TGG - chr5.2:15971066-15971085 MS.gene82471:CDS 70.0%
TGGATCCGGTGGCCGTTGGG+AGG - chr5.2:15971070-15971089 MS.gene82471:CDS 70.0%
! AGGTGGTCAGACCGGCTCCC+AGG + chr5.2:15971864-15971883 None:intergenic 70.0%
! GGCGGATGACGGTGCGACGA+CGG - chr5.2:15972562-15972581 MS.gene82471:intron 70.0%
GCTATAGCGGCCGCGCGGTG+CGG + chr5.2:15972892-15972911 None:intergenic 75.0%
! CGCGCGGTGCGGTGCGGTAC+CGG + chr5.2:15972881-15972900 None:intergenic 80.0%
! CGGTACCGCACCGCACCGCG+CGG - chr5.2:15972879-15972898 MS.gene82471:intron 80.0%
! GCGGCGCTATAGCGGCCGCG+CGG + chr5.2:15972897-15972916 None:intergenic 80.0%
! AGCGGCCGCGCGGTGCGGTG+CGG + chr5.2:15972887-15972906 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 15971040 15975695 15971040 ID=MS.gene82471
chr5.2 mRNA 15971040 15975695 15971040 ID=MS.gene82471.t1;Parent=MS.gene82471
chr5.2 exon 15975610 15975695 15975610 ID=MS.gene82471.t1.exon1;Parent=MS.gene82471.t1
chr5.2 CDS 15975610 15975695 15975610 ID=cds.MS.gene82471.t1;Parent=MS.gene82471.t1
chr5.2 exon 15973319 15973435 15973319 ID=MS.gene82471.t1.exon2;Parent=MS.gene82471.t1
chr5.2 CDS 15973319 15973435 15973319 ID=cds.MS.gene82471.t1;Parent=MS.gene82471.t1
chr5.2 exon 15972917 15973202 15972917 ID=MS.gene82471.t1.exon3;Parent=MS.gene82471.t1
chr5.2 CDS 15972917 15973202 15972917 ID=cds.MS.gene82471.t1;Parent=MS.gene82471.t1
chr5.2 exon 15972634 15972789 15972634 ID=MS.gene82471.t1.exon4;Parent=MS.gene82471.t1
chr5.2 CDS 15972634 15972789 15972634 ID=cds.MS.gene82471.t1;Parent=MS.gene82471.t1
chr5.2 exon 15971727 15971878 15971727 ID=MS.gene82471.t1.exon5;Parent=MS.gene82471.t1
chr5.2 CDS 15971727 15971878 15971727 ID=cds.MS.gene82471.t1;Parent=MS.gene82471.t1
chr5.2 exon 15971040 15971229 15971040 ID=MS.gene82471.t1.exon6;Parent=MS.gene82471.t1
chr5.2 CDS 15971040 15971229 15971040 ID=cds.MS.gene82471.t1;Parent=MS.gene82471.t1
Gene Sequence

>MS.gene82471

ATGGAGGGGCGAATGGCGCCTATCAATGCCTGGATCCGGTGGCCGTTGGGAGGCATTACTAATGGAGCCATTGGAGAGGATTCAAGGTTGGGAAGTGGTTCCGTTGGATAAGGTCTTTGTGAAATGGGTCTGAAGATAACGAAGGACTGAACCTTGGGCCAATTCAGAACAAGTTTGTTACATTGATTCACTTCCAAGTTTTAGAGAGCTTGGATCTCTCCCTCCCAAATCTTAGTCCAAATAACCAACTTCCCTTTTCCCACAACTTCCCTTTTCCCATAACTTCCCATTTATTACTCAAATATATAAGAAACATAACATATAACTACCCTCTTTCAATAATCAGAAACTAACCCACTTAGCTGGGTCTCCTATGGTAATGTTTATCAATGATTGATCTAACAGTGTGTAAGTTATATAAGATCAAAAGCAAGTGATGGCTAAACTTTAGAGATAAATACATATGTATCTGTATTTTGATGTCAAATAACACAAATGTTATGTTTACCTTATTTTTTATCAGGGTTGGATTATGGGTTTTATGACCTACAATTTTTTTAAGATTAGGGTGTGGGATAGTATGAGAATATTCCCTAGATCTCATATTATGTTCCGGTTTGGAACATTTCTTTGTATCAGATTATTTGTTATTTTAGAATATGAATGAGAGTATTAATTATTTGTTATTTTAGAATATGATATATTCCCTTACTATATTTTATGATGTTGTTTATTCCTTTTCACATTAGTTTTTTTTCTTTTTGAAAACCATATTATTGGTGCGAAGTATCCACTGATTTTTTGCCAATGACCAATTTTCACCTGGGAGCCGGTCTGACCACCTTTAGTTTGATGTTATTCATTATTATTTAAAAAATCTTGTTCTAATATTATTGTTTGTTTGTGCCCAGTGCTTTCAGACTTCCACTTTTATGATATATATGCATAGCGGATAGCGGATAGCGGCGCGTAGCGGATAGCGGCGCGTAGCGGCCGACCCCAAAAATGCTATAGCGGGATAGCGCCTAGCGCTATGACCGCTATTTCATAACTTTTACGACATAATTTTACATCACCCGTAATTCCCAATTGGTGTCTTCTTGCTCTACTAATTCCTCCATTGCTGACCTTATCACAGAAATCACAGTAAATCTTTTTCTTATCATTCAAATCCTTCCAATGATATTAAATTGCCAAGCAATGTCGAGATTATCACCGGTCCGTTTATGTCTTTGAGCACATGAGTCAACAGACACAGTTTGATTGAACACCAGAAGCTGATGCTGCCATGACTGTGTTGTCCACAAAAACAACAAAAATAAGGAAACAGAGAGCAGAATAGAGGATGAACAAATCAGAGGATGTTTGTGATATGTTTATGAACAAGCAGAATAGAGGATGAACAAAACAGAGGATGTTTGTGATATGTTTATGAACAAAACAGAGAGGAAGATTTTTAGAAGAGAGCAAACACGAGGTCAAGAAGTTACAAACCTGAGGAACGGCGGCGGTAAGGAACGACGGCGGATGACGGTGCGACGACGGCGTTTTACGGTGAGAAGATGTACAGATCGTCCGTTTTTTGAGAGAAATGCGTTTTGGGGTGAGAAGATGAAAGGCGCCGTAAAGAATGAAAGAAGGAAGAGAGAAACTGAAGTTATTAGGGTTTGACAAAAATGACAAAAATACCCTTGTTTTTTTTTTTAAAACCAAGGAGAATCTTGTATTTTCACGTAAAATGAAATAGCGGTGCTAGACTGCAAAACCGCTATGCAGTGTTGCGGCCGCTATTGCGCCGCTATCTCAACGCTACGCCATATGGCTTATTGCATAGCGGTCCGGTACCGCACCGCACCGCGCGGCCGCTATAGCGCCGCTATTAACTACTCTGTATATATGTGGTTGACTAGTTTGATTGTTAGCAGCATAGGCCAATACCTGCTATGTACATTTAATTATGCTACAATCTGCATATTCAAACTTTAGAAATAAAATTTAACTTACAACTTCTTTGTGCCCTCTAAGTCTGATTGCATTGTTCACTTTTCTAACGTTGTAAGAGTATTTTTGATCATACCATGATGGCTGAAGACGAACACGACCGCCCATTACTAAGAACCTCCTGACATCATTCTTCTTTCTTGGATTAACTGGGTGAGGTTTTTTATACTAGTCACTTAGTTCCTATTTCCTTCACATACGAGTGAGAGAATCTTTTTATTGACTGCTGTGGCATTTTTGCTTTGTGATTCATGACCAGGATATTTGGCAACCAGCTTCTGTTTCTCATTGGTTTAAGCTATACAAATCCAACTTATGCTGCTGCCACACAGCCTGCCATTCCAGTCTTTACATTTTTGTTCGCTGTAATTATGGGGTCAGTTTTGTGTATCATAAAACACAAACACAAATTGCACTGTGAATTATTAATAAACTTATACGGATAAACCAGGACATACAGTAATACATACCTTAATGAACTTTTTAATGCAGTACAGAAAGAGTGAACTTGCTCAGATATGAAGGTTTGGCAAAGGTTCTAGGAACACTTATCTGTGTTTCTGGTGCCATTTTGATGGTTTTGTTTCGCGGTCCAATTGTGATAGGGTATTCAGAAATTGATCATGTAGCACGTAATGAAATTAGTGCGCGAGGTCAGCCCGAACCTTCTGGATGGTTTGTCGGTGGTTTACTGGATCTTGGGTTTGACCATTTTCATCTTGGGGTTCTGTGCTTGATAGGGAACTGCATGTGTATGGCTGCTTTTCTAGCCATACAAGTATGCATCTTTTTACTATATCTATTAAATTAATTAGTTATTAATTACAGCGTCAAGCGAACACTTTAGTGGTCTTCAGTTTGTGTATGGTTGGTGCATTTAATTTATCACCGTTAATTATTTTCAGGCACCAGTATTAAAAAAATATCCTGCAAACTTATCTGTCACAGCATATTCATACTTCTTCGGAGCTGCTTTGATGGTGGCAGTGTCGTTTTTAATGACTAATGAGTCAACTGACTGGAGTTTGACATCTTCAGAAATACTTGCTGTTATTTATGCTGTGAGTTACCGAAATTTAAAATCAGTCTCCGATTTCAGGAACCTTTATCAGTAATTGCTTATGATTTTGGTCCATATTATATTACTATATTAAATTGCCGGAGTTGTCTTCAAAATGTTGTCCATTTTAGTTAATTGCAACATATCAGCTATCAATTATTGACTGTTTGGTAAAGTAAGTCATTCTCACATAATGATGTAGGAGTCAAAGTTTTTTGCTAGTTTGTTTTACTTTTCAAAGTTTTAACAATGGTTTTATTTTTGATTGACTGTTGGTATAAATTTTTTAACTATTTGTAAATTATTTGGCTCAAAACCAAATGCTGGAGTTTTAAATATTGGCATTACTTGATGCTGTTCCTATTTTCTATCTCCATACTAAATTTGAAATGTTGGTTCTTGAGTCTTCTTCCGATTGCGCAAAACCAAATGCTAGTGTGATATCATCTCATTTGTATGAACCATAGAAAGGACACGTTGTTGCCGAAGCAACTGAACTCGCCGTTGCCCTTATTGACAAAAGTCACGAAAAAGTTTCTACCTTGGAGTGACAGTAGTATAGAGTAAGATGAGATTTTTCTGCTACGACTCAGTTGCATGCTTTGTCCTGTGATGCAAGATTGTTAAATGGAGGGAAAAGATTGAAGAGTATCTGATGTTCTTGCAAATATTCTGATAGATTTTACCTCGTTTAGATTATTTTGGTGGTTTTTTAACGTGTAGATTTCAACAAATATTTTCATTTATTTTGTTCAGGGAATTATTGCATCTGCCCTTAACTATGGACTCATTACGTGGTGTAACAAGATATTAGGGCCAGCTTTGGTTGCCCTATACAATCCACTTCAACCTGCCTTTTCTGCCCTACTGTCTCGGATGTTCCTCGGAAGTCCAATTTACTTGGGCAGGTATAGTATACCTCCTTTTACTTCCATTTATTGATTCATGCATTCTCTATGCTAACTGGAATAAATTGCTACAAAATCTAACATTAACAAAATGTGGAAAACTGCAATCTACCACTTCATTTTCTGAAACAATTTTACTGGTTAGGACTTTACAAAGGGCGCGTCTAATATGAACCTTTTAGAAAAGGGAGGTTCAATGGTGGACCGTTGAAGTTAACTTGATAGTTGATATAGCAAGTTAATCCAATTTTTTGTTGCTATGAAGAAAAGTTAATATTATTGCAATCTGATAACAACACAAATGAAACATGATGTAGCATTGTAGCAAGTCAGTCCATGAAATCCACCATTAGACCATATTAGAAGCCTCCCCTTATATCAAAATGTCATTACTTGATGAAGAAGTTCATCCTCTTTTTTGTAGTATGCATTTTGAAATTATTTTTATTTAGAAGTTTCTTATTATTCTTATGTCATTTTTATCCATGTGACAACAGCATCATAGGAGGATCATTTATCATTGCTGGTCTATATACGGTTACTTGGGGATCATATAGAGAGAGACATGCAACAGTTGGAGTTGTTCCTCATGGATGGGAAGCTGAACCACTCATCCATGACAAGATAGGTCAAATTTTTTCAGGGTCCTCTAGTCTATCTGCAAGTCCAAAGTCAGCAGCTGATTAA
Protein sequence

>MS.gene82471.t1

MEGRMAPINAWIRWPLGGITNGAIGEDSRIFGNQLLFLIGLSYTNPTYAAATQPAIPVFTFLFAVIMGTERVNLLRYEGLAKVLGTLICVSGAILMVLFRGPIVIGYSEIDHVARNEISARGQPEPSGWFVGGLLDLGFDHFHLGVLCLIGNCMCMAAFLAIQAPVLKKYPANLSVTAYSYFFGAALMVAVSFLMTNESTDWSLTSSEILAVIYAGIIASALNYGLITWCNKILGPALVALYNPLQPAFSALLSRMFLGSPIYLGSIIGGSFIIAGLYTVTWGSYRERHATVGVVPHGWEAEPLIHDKIGQIFSGSSSLSASPKSAAD