AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene82720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82720.t1 MTR_3g051300 93.011 744 36 2 1 734 1 738 0.0 1424
MS.gene82720.t1 MTR_5g092570 66.533 750 228 4 1 733 1 744 0.0 1002
MS.gene82720.t1 MTR_2g102180 50.254 786 333 8 1 734 1 780 0.0 753
MS.gene82720.t1 MTR_4g012050 49.172 785 343 10 1 734 1 780 0.0 725
MS.gene82720.t1 MTR_3g081170 26.928 817 499 20 2 735 25 826 2.45e-84 286
MS.gene82720.t1 MTR_7g024580 27.300 663 408 12 4 652 10 612 3.88e-72 248
MS.gene82720.t1 MTR_4g063710 27.436 667 408 13 4 655 10 615 4.66e-72 247
MS.gene82720.t1 MTR_7g024390 27.149 663 409 12 4 652 10 612 7.93e-72 246
MS.gene82720.t1 MTR_7g099680 32.783 424 266 4 4 414 10 427 2.41e-71 245
MS.gene82720.t1 MTR_4g130540 26.998 663 410 13 4 652 9 611 5.61e-71 244
MS.gene82720.t1 MTR_4g063720 32.311 424 268 4 4 414 10 427 1.46e-70 243
MS.gene82720.t1 MTR_7g078190 33.882 425 262 4 4 414 10 429 3.05e-69 239
MS.gene82720.t1 MTR_8g099945 26.947 642 388 14 2 626 37 614 1.22e-68 238
MS.gene82720.t1 MTR_8g099795 26.947 642 388 14 2 626 37 614 2.28e-68 238
MS.gene82720.t1 MTR_6g033955 31.002 429 272 5 4 414 10 432 1.43e-66 232
MS.gene82720.t1 MTR_7g025760 31.765 425 270 5 4 414 10 428 2.96e-66 231
MS.gene82720.t1 MTR_7g025740 31.776 428 272 5 4 417 10 431 3.95e-66 231
MS.gene82720.t1 MTR_6g033760 31.382 427 274 4 4 417 10 430 5.74e-66 230
MS.gene82720.t1 MTR_8g032650 32.629 426 265 7 4 414 10 428 1.19e-65 229
MS.gene82720.t1 MTR_6g033820 31.002 429 272 4 4 414 10 432 1.87e-65 230
MS.gene82720.t1 MTR_6g033850 31.592 402 261 3 4 392 10 410 7.25e-65 228
MS.gene82720.t1 MTR_7g024030 31.294 425 272 5 4 414 10 428 1.41e-64 226
MS.gene82720.t1 MTR_2g437440 31.421 401 260 4 4 390 10 409 2.86e-64 225
MS.gene82720.t1 MTR_2g038260 31.059 425 274 5 4 414 10 429 3.16e-64 225
MS.gene82720.t1 MTR_7g026030 31.294 425 272 5 4 414 10 428 3.76e-64 225
MS.gene82720.t1 MTR_6g033870 30.416 457 290 6 4 438 11 461 4.13e-64 226
MS.gene82720.t1 MTR_5g066800 30.717 446 264 9 4 417 10 442 2.08e-63 223
MS.gene82720.t1 MTR_7g025720 32.319 427 265 6 4 414 10 428 2.33e-63 223
MS.gene82720.t1 MTR_7g025790 31.294 425 272 5 4 414 10 428 2.36e-63 223
MS.gene82720.t1 MTR_2g010020 33.251 406 243 6 3 393 56 448 3.98e-63 223
MS.gene82720.t1 MTR_2g010020 33.251 406 243 6 3 393 57 449 5.15e-63 223
MS.gene82720.t1 MTR_7g029415 28.455 492 328 8 4 479 17 500 1.79e-62 221
MS.gene82720.t1 MTR_2g032550 31.382 427 269 7 4 414 11 429 2.82e-62 220
MS.gene82720.t1 MTR_7g021440 31.690 426 269 8 4 414 10 428 4.18e-62 219
MS.gene82720.t1 MTR_7g026090 32.009 428 263 6 4 414 10 426 5.51e-62 219
MS.gene82720.t1 MTR_7g026170 29.757 494 324 8 4 481 10 496 5.72e-62 219
MS.gene82720.t1 MTR_7g451380 31.221 426 271 6 4 414 10 428 8.61e-62 218
MS.gene82720.t1 MTR_7g025820 30.020 503 314 11 4 483 10 497 1.17e-61 218
MS.gene82720.t1 MTR_2g017730 30.233 430 275 5 4 414 9 432 4.79e-61 216
MS.gene82720.t1 MTR_4g092920 32.020 406 249 6 3 393 53 446 8.66e-61 217
MS.gene82720.t1 MTR_2g022050 30.876 434 277 7 4 423 10 434 1.26e-60 215
MS.gene82720.t1 MTR_4g079590 30.047 426 276 7 4 414 10 428 2.68e-60 214
MS.gene82720.t1 MTR_7g025770 29.302 430 278 7 2 414 8 428 4.47e-60 214
MS.gene82720.t1 MTR_7g078210 31.221 426 271 6 4 414 10 428 6.53e-60 213
MS.gene82720.t1 MTR_7g025620 29.977 427 279 5 2 414 8 428 3.10e-59 211
MS.gene82720.t1 MTR_7g026110 30.930 430 266 9 4 414 10 427 1.21e-58 209
MS.gene82720.t1 MTR_7g026130 29.508 427 280 6 4 414 10 431 2.76e-58 211
MS.gene82720.t1 MTR_2g032580 29.358 436 287 7 4 424 10 439 3.48e-58 208
MS.gene82720.t1 MTR_7g025630 30.023 443 274 7 4 430 10 432 8.57e-58 207
MS.gene82720.t1 MTR_2g040370 31.662 379 245 2 4 371 1030 1405 2.19e-57 213
MS.gene82720.t1 MTR_2g040370 30.612 343 234 2 4 345 1414 1753 3.26e-49 188
MS.gene82720.t1 MTR_2g040370 31.662 379 245 2 4 371 1030 1405 2.29e-57 213
MS.gene82720.t1 MTR_2g040370 30.612 343 234 2 4 345 1414 1753 3.55e-49 187
MS.gene82720.t1 MTR_2g040260 30.982 397 260 2 4 389 1039 1432 3.73e-57 212
MS.gene82720.t1 MTR_2g038270 29.130 460 294 8 3 436 9 462 1.27e-56 204
MS.gene82720.t1 MTR_7g011590 29.647 425 267 6 4 414 10 416 3.53e-56 202
MS.gene82720.t1 MTR_2g040160 31.332 383 249 2 4 375 1110 1489 5.87e-56 208
MS.gene82720.t1 MTR_2g032160 30.814 344 235 2 4 345 10 352 1.31e-54 195
MS.gene82720.t1 MTR_7g451360 30.049 406 239 5 4 395 10 384 1.94e-53 194
MS.gene82720.t1 MTR_7g026140 28.941 425 267 7 4 414 10 413 5.93e-53 194
MS.gene82720.t1 MTR_4g027145 28.604 437 281 6 4 414 10 441 1.02e-51 191
MS.gene82720.t1 MTR_7g025260 29.310 464 289 12 42 481 20 468 5.43e-51 188
MS.gene82720.t1 MTR_8g103930 28.675 415 254 8 4 393 12 409 2.14e-50 186
MS.gene82720.t1 MTR_7g035155 28.261 414 246 6 4 414 10 375 6.45e-50 184
MS.gene82720.t1 MTR_2g040350 30.446 404 259 5 3 389 1038 1436 7.19e-50 189
MS.gene82720.t1 MTR_2g040350 30.446 404 259 5 3 389 820 1218 1.84e-49 188
MS.gene82720.t1 MTR_1g077230 33.455 275 178 3 4 275 10 282 2.12e-48 172
MS.gene82720.t1 MTR_7g007000 28.019 414 256 9 4 414 10 384 5.22e-48 179
MS.gene82720.t1 MTR_2g005690 31.281 406 253 7 3 393 71 465 6.16e-48 181
MS.gene82720.t1 MTR_2g040220 27.934 426 283 5 4 406 1019 1443 2.59e-47 182
MS.gene82720.t1 MTR_1g017130 25.882 425 257 6 4 414 10 390 1.45e-46 175
MS.gene82720.t1 MTR_6g033800 31.153 321 209 2 84 393 1 320 2.41e-46 174
MS.gene82720.t1 MTR_7g074460 28.288 403 256 6 4 392 10 393 7.58e-46 173
MS.gene82720.t1 MTR_4g092920 30.864 324 198 5 84 393 1 312 3.38e-41 159
MS.gene82720.t1 MTR_4g063720 23.238 667 365 18 4 655 10 544 3.36e-39 153
MS.gene82720.t1 MTR_7g026080 31.780 236 156 3 4 236 10 243 1.36e-36 138
MS.gene82720.t1 MTR_1g041565 25.304 411 239 8 2 398 4 360 2.09e-36 145
MS.gene82720.t1 MTR_6g034005 27.795 331 222 4 74 393 2 326 8.78e-34 138
MS.gene82720.t1 MTR_4g088515 28.000 250 159 3 4 251 277 507 4.43e-29 123
MS.gene82720.t1 MTR_1207s0010 35.227 176 112 1 103 278 4 177 1.31e-28 113
MS.gene82720.t1 MTR_2g031670 27.434 226 159 2 15 238 45 267 1.87e-28 117
MS.gene82720.t1 MTR_6g033810 26.780 295 154 3 112 393 42 287 8.51e-28 114
MS.gene82720.t1 MTR_5g006180 24.816 407 279 11 4 394 30 425 1.32e-20 96.7
MS.gene82720.t1 MTR_7g026180 35.246 122 79 0 70 191 23 144 4.71e-19 89.7
MS.gene82720.t1 MTR_5g097190 25.907 193 128 4 4 192 159 340 3.43e-17 84.3
MS.gene82720.t1 MTR_6g478100 24.658 219 150 3 30 248 10 213 1.94e-16 81.6
MS.gene82720.t1 MTR_4g107920 25.610 328 202 12 113 414 125 436 8.60e-16 81.6
MS.gene82720.t1 MTR_7g026050 25.439 228 145 4 238 452 1 216 2.13e-14 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82720.t1 AT1G11660 58.737 744 282 4 1 733 1 730 0.0 870
MS.gene82720.t1 AT1G11660 58.737 744 282 4 1 733 1 730 0.0 870
MS.gene82720.t1 AT1G11660 58.737 744 282 4 1 733 1 730 0.0 870
MS.gene82720.t1 AT1G11660 57.143 707 278 4 38 733 1 693 0.0 801
MS.gene82720.t1 AT1G79930 49.616 782 343 7 1 734 1 779 0.0 762
MS.gene82720.t1 AT1G79930 49.680 781 342 7 1 733 1 778 0.0 761
MS.gene82720.t1 AT1G79920 51.464 649 269 8 1 607 1 645 0.0 656
MS.gene82720.t1 AT1G79920 51.464 649 269 8 1 607 1 645 0.0 652
MS.gene82720.t1 AT1G79920 51.464 649 269 8 1 607 1 645 0.0 652
MS.gene82720.t1 AT1G79920 51.464 649 269 8 1 607 1 645 0.0 652
MS.gene82720.t1 AT4G16660 28.731 804 496 22 2 735 25 821 9.73e-87 292
MS.gene82720.t1 AT4G16660 28.731 804 496 22 2 735 49 845 1.44e-86 292
MS.gene82720.t1 AT5G28540 27.695 668 401 15 2 652 36 638 6.89e-75 255
MS.gene82720.t1 AT5G42020 27.395 668 403 15 2 652 41 643 1.71e-74 254
MS.gene82720.t1 AT5G42020 27.395 668 403 15 2 652 36 638 1.88e-74 254
MS.gene82720.t1 AT1G16030 27.451 663 407 14 4 652 9 611 2.79e-73 251
MS.gene82720.t1 AT3G09440 27.844 668 398 14 4 652 10 612 8.01e-73 249
MS.gene82720.t1 AT3G09440 27.844 668 398 14 4 652 10 612 8.01e-73 249
MS.gene82720.t1 AT3G09440 27.844 668 398 14 4 652 10 612 8.01e-73 249
MS.gene82720.t1 AT3G09440 27.844 668 398 14 4 652 10 612 8.01e-73 249
MS.gene82720.t1 AT3G12580 27.055 669 408 14 4 655 10 615 5.81e-72 247
MS.gene82720.t1 AT5G02500 26.917 665 408 13 4 652 10 612 1.26e-71 246
MS.gene82720.t1 AT1G09080 28.657 670 391 15 2 652 41 642 2.58e-71 246
MS.gene82720.t1 AT1G09080 28.657 670 391 15 2 652 51 652 4.86e-71 245
MS.gene82720.t1 AT1G56410 32.010 403 260 3 4 393 10 411 5.19e-68 236
MS.gene82720.t1 AT5G42020 32.512 406 255 5 2 393 36 436 6.10e-68 235
MS.gene82720.t1 AT5G02500 32.982 379 242 2 4 371 10 387 1.01e-67 232
MS.gene82720.t1 AT5G02490 27.313 670 399 16 4 652 10 612 1.06e-67 236
MS.gene82720.t1 AT5G09590 32.759 406 246 7 3 393 59 452 2.22e-61 219
MS.gene82720.t1 AT4G37910 32.637 383 233 5 3 370 54 426 1.69e-56 205
MS.gene82720.t1 AT4G37910 32.637 383 233 5 3 370 54 426 1.69e-56 205
MS.gene82720.t1 AT5G49910 31.773 406 251 7 3 393 80 474 4.45e-49 184
MS.gene82720.t1 AT4G24280 31.281 406 253 7 3 393 80 474 1.75e-47 180
MS.gene82720.t1 AT2G32120 24.408 422 265 14 4 394 31 429 3.31e-18 89.4
MS.gene82720.t1 AT2G32120 24.408 422 265 14 4 394 31 429 3.31e-18 89.4

Find 142 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTATAGGCAGGAGATTTC+TGG 0.177339 3.1:+38284861 MS.gene82720:CDS
AATATTGGGTCGACATTCTT+AGG 0.196299 3.1:-38290465 None:intergenic
GATTGGAAGACCACAGTATT+TGG 0.206743 3.1:-38286386 None:intergenic
CCCATCTCGGATTGTGTTAT+TGG 0.218841 3.1:+38285060 MS.gene82720:CDS
GAATCTTGCATCTGGATTAT+TGG 0.227874 3.1:+38285566 MS.gene82720:CDS
TGCATTGCAGCATTTGAGTT+TGG 0.237984 3.1:+38285279 MS.gene82720:CDS
TTGTGGAGAATCACGCTTAT+TGG 0.246669 3.1:-38288197 None:intergenic
ATATGACTTGACCATAATAT+TGG 0.250150 3.1:-38290480 None:intergenic
TTTGGAATGGGATGCCCTTT+TGG 0.307374 3.1:-38286368 None:intergenic
AGCTAGTTGGTTCAGGTTCT+AGG 0.310491 3.1:+38285661 MS.gene82720:CDS
CTCTGTCCTGTTGAGCTAAC+TGG 0.311382 3.1:-38288814 None:intergenic
TCGCAAGTGAAGAGATTTAT+AGG 0.314040 3.1:+38284847 MS.gene82720:CDS
CTATCTGAGGTCTCGGACTT+AGG 0.323825 3.1:-38288139 None:intergenic
AAATCTCTTCACTTGCGATA+TGG 0.325541 3.1:-38284842 None:intergenic
TCTGTGGAGCTAGTTGGTTC+AGG 0.330516 3.1:+38285654 MS.gene82720:CDS
GATTGAAGTCCATATGAAAA+AGG 0.332999 3.1:-38286302 None:intergenic
GCATTGCAGCATTTGAGTTT+GGG 0.334946 3.1:+38285280 MS.gene82720:CDS
GCCAACTGATTTGTCCCATT+TGG 0.343188 3.1:+38286412 MS.gene82720:CDS
ACTCACTTGCATTCAACTTT+CGG 0.346468 3.1:-38285734 None:intergenic
AAAACTAGAAGATCTGAAAA+AGG 0.347739 3.1:+38290092 MS.gene82720:CDS
ACCCCGGCTGTCGTCTGCTT+TGG 0.348056 3.1:+38284757 MS.gene82720:CDS
CTTGATGCGGCAATAATTGC+TGG 0.361065 3.1:+38285123 MS.gene82720:CDS
AGCGCCATTGGCAACAGAAT+TGG 0.380177 3.1:-38288164 None:intergenic
GAGATTTCTGGATCCTGATA+TGG 0.383130 3.1:+38284873 MS.gene82720:CDS
GATGGATGAGAAAGATGTTA+AGG 0.384502 3.1:+38285518 MS.gene82720:CDS
AGCATAGACATTATTTGAAC+TGG 0.388293 3.1:-38284994 None:intergenic
TATGACTTGACCATAATATT+GGG 0.389242 3.1:-38290479 None:intergenic
GCGCAATAGAGGAGCTAAAC+AGG 0.389650 3.1:+38290508 MS.gene82720:CDS
GAATTTGAGAATCTTGCATC+TGG 0.393858 3.1:+38285558 MS.gene82720:CDS
AGAACTCCAGTTAGCTCAAC+AGG 0.394053 3.1:+38288808 MS.gene82720:CDS
TTTGTTTCATTTGAAATACT+TGG 0.395527 3.1:+38284951 MS.gene82720:CDS
AGAATGTCGACCCAATATTA+TGG 0.406352 3.1:+38290469 MS.gene82720:CDS
TCGATATTTAGCGGTGCCTC+TGG 0.422641 3.1:-38285489 None:intergenic
TCTTTGTACCGAATCTCAAT+TGG 0.423825 3.1:-38290195 None:intergenic
CTTGCGATATGGTTGACTTT+GGG 0.426132 3.1:-38284831 None:intergenic
GTTGAATGATGAATCGAAAC+GGG 0.426655 3.1:+38284732 MS.gene82720:CDS
GACTGAGGATTGGCTTTATG+AGG 0.428957 3.1:+38290035 MS.gene82720:CDS
ACAAATCAGTTGGCTTGGAT+TGG 0.430033 3.1:-38286403 None:intergenic
TCTCCAAAGCAGACGACAGC+CGG 0.433571 3.1:-38284760 None:intergenic
AAATTCTCATTCACTGCAAT+AGG 0.439271 3.1:-38288740 None:intergenic
ACTGCAACTGCCCTTAGTTA+TGG 0.442544 3.1:+38285177 MS.gene82720:CDS
ATGGATGAGAAAGATGTTAA+GGG 0.444474 3.1:+38285519 MS.gene82720:CDS
TTGCGTAGAAAGCTTCCAAA+TGG 0.446853 3.1:-38286427 None:intergenic
AACAGCTCTTTAACACATAT+CGG 0.449054 3.1:+38289962 MS.gene82720:intron
TTCATTTGAAATACTTGGAT+GGG 0.453899 3.1:+38284956 MS.gene82720:CDS
GCAGTGAATGAGAATTTCTA+TGG 0.456214 3.1:+38288746 MS.gene82720:CDS
ATTTCTTCTGTGGAGCTAGT+TGG 0.456860 3.1:+38285648 MS.gene82720:CDS
TCATATTAAGAGCGCAATAG+AGG 0.458464 3.1:+38290497 MS.gene82720:CDS
CATTTGAGTTTGGGCAAATG+AGG 0.460044 3.1:+38285289 MS.gene82720:CDS
ACTTGCGATATGGTTGACTT+TGG 0.461121 3.1:-38284832 None:intergenic
ATGGGACAAATCAGTTGGCT+TGG 0.466374 3.1:-38286408 None:intergenic
AGCATTAATTGAAGCAGGCT+TGG 0.471739 3.1:+38285614 MS.gene82720:CDS
TCAATTAATGCTTCGTTGCA+AGG 0.472169 3.1:-38285603 None:intergenic
AAGAGAGGGATGTCATATCT+AGG 0.475264 3.1:+38290001 MS.gene82720:CDS
TGTGTGGCTTCAGTTGATCA+AGG 0.477113 3.1:+38288069 MS.gene82720:intron
AACGAAGCATTAATTGAAGC+AGG 0.477356 3.1:+38285609 MS.gene82720:CDS
GGTACTATCTTCAGCGCCAT+TGG 0.480640 3.1:-38288176 None:intergenic
TTTGGGAAAAGTACACCATC+TGG 0.486296 3.1:-38286350 None:intergenic
GCATGGATCTCAAGGTAGTA+AGG 0.492874 3.1:+38287905 MS.gene82720:CDS
TTTCATTTGAAATACTTGGA+TGG 0.496854 3.1:+38284955 MS.gene82720:CDS
GCTAAATATCGAGTGTCTGA+TGG 0.498645 3.1:+38285500 MS.gene82720:CDS
TTTCAGATCGGTCCTATGCA+TGG 0.498893 3.1:+38287888 MS.gene82720:intron
ATTGGTACTATCTGAGGTCT+CGG 0.498902 3.1:-38288146 None:intergenic
TGAAACAAAACGCCACCATC+CGG 0.499778 3.1:-38284937 None:intergenic
TATGTTGCATTTATTGACAT+TGG 0.501872 3.1:+38285237 MS.gene82720:CDS
TAGATATGACATCCCTCTCT+TGG 0.502479 3.1:-38289999 None:intergenic
TGTTGAATGATGAATCGAAA+CGG 0.503473 3.1:+38284731 MS.gene82720:CDS
TGCAAGTCTGTGAAGTATGA+TGG 0.503488 3.1:-38285087 None:intergenic
CTCCAAAGCAGACGACAGCC+GGG 0.503841 3.1:-38284759 None:intergenic
CTTGCATTCAACTTTCGGCT+CGG 0.505967 3.1:-38285729 None:intergenic
TCTTGAAACTTCTGAAGGGC+CGG 0.508864 3.1:+38284918 MS.gene82720:CDS
AAGACCACAGTATTTGGAAT+GGG 0.508938 3.1:-38286380 None:intergenic
TCTGGATCCTGATATGGAAA+AGG 0.508996 3.1:+38284879 MS.gene82720:CDS
AAGTGAAGAGATTTATAGGC+AGG 0.509278 3.1:+38284851 MS.gene82720:CDS
ACAGTACTTACATAACTTTG+TGG 0.511678 3.1:-38288214 None:intergenic
TGGTGGATCCAATTGAGATT+CGG 0.522302 3.1:+38290187 MS.gene82720:CDS
ACGCAGTCTAATGCAAGCCT+TGG 0.526534 3.1:-38285427 None:intergenic
AGATTTGGAGGCACCCATCT+CGG 0.528289 3.1:+38285047 MS.gene82720:CDS
TGCGTAGAAAGCTTCCAAAT+GGG 0.529319 3.1:-38286426 None:intergenic
ATACCGTGTTCGAGACTATG+AGG 0.530068 3.1:+38285803 MS.gene82720:CDS
ACCAATAACACAATCCGAGA+TGG 0.536467 3.1:-38285061 None:intergenic
ATAGTCTCGAACACGGTATG+TGG 0.536810 3.1:-38285799 None:intergenic
TTGCTGTGGCAAAGCATCGC+GGG 0.538277 3.1:+38284698 MS.gene82720:CDS
TGTCTATGAGACGAGGAGTA+AGG 0.539018 3.1:+38288880 MS.gene82720:CDS
CTCCCTCTTGAAACTTCTGA+AGG 0.541529 3.1:+38284913 MS.gene82720:CDS
TCCAAATGGGACAAATCAGT+TGG 0.545647 3.1:-38286413 None:intergenic
GAAGACCACAGTATTTGGAA+TGG 0.549513 3.1:-38286381 None:intergenic
CTTCACAGACTTGCAGAGAC+GGG 0.553538 3.1:+38285095 MS.gene82720:CDS
CAGTCATGTATCAGTCTCAA+AGG 0.555113 3.1:-38285153 None:intergenic
TTTGTAAATTCCATAACTAA+GGG 0.555405 3.1:-38285187 None:intergenic
TGAGTTGAAATGAGTGTGGT+AGG 0.556969 3.1:+38284646 None:intergenic
CGAATTTCTGATAGACCAGA+TGG 0.560566 3.1:+38286335 MS.gene82720:CDS
GTTTGCAAGAGACTGAGGAT+TGG 0.563246 3.1:+38290025 MS.gene82720:CDS
TGCAGAGAAGATTTCTTCTG+TGG 0.563467 3.1:+38285638 MS.gene82720:CDS
GCTTTGCTAGCGACCAAGAG+AGG 0.571790 3.1:+38289986 MS.gene82720:CDS
GCAAGTCTGTGAAGTATGAT+GGG 0.572931 3.1:-38285086 None:intergenic
CCAATAACACAATCCGAGAT+GGG 0.574942 3.1:-38285060 None:intergenic
GAAAAGATAAGGCGAACAGA+AGG 0.576632 3.1:+38288714 MS.gene82720:CDS
AGATTGTCTAAGAAAAGATA+AGG 0.579423 3.1:+38288703 MS.gene82720:CDS
TTAGCAATGAAGCAGAGCAT+TGG 0.581229 3.1:+38290409 MS.gene82720:CDS
AGAGCATTGGCTAACAGAGA+AGG 0.581697 3.1:+38290422 MS.gene82720:CDS
GGTCCTATGCATGGATCTCA+AGG 0.585543 3.1:+38287897 MS.gene82720:CDS
ATCAGACACTCGATATTTAG+CGG 0.586237 3.1:-38285498 None:intergenic
ACTTCACAGACTTGCAGAGA+CGG 0.589672 3.1:+38285094 MS.gene82720:CDS
TGATGTGTATTCTAATGCCA+AGG 0.591618 3.1:+38285410 MS.gene82720:CDS
AACAGAATTGGTACTATCTG+AGG 0.592528 3.1:-38288152 None:intergenic
ACTTCTGAAGGGCCGGATGG+TGG 0.593340 3.1:+38284925 MS.gene82720:CDS
ACTCCTCGTCTCATAGACAT+AGG 0.598057 3.1:-38288876 None:intergenic
TTGATGCGGCAATAATTGCT+GGG 0.599405 3.1:+38285124 MS.gene82720:CDS
AGCTCAACAGGACAGAGCTG+TGG 0.600190 3.1:+38288820 MS.gene82720:CDS
TGAATCGAAACGGGAAACCC+CGG 0.600876 3.1:+38284741 MS.gene82720:CDS
CTCATAGACATAGGACTCCA+AGG 0.602157 3.1:-38288867 None:intergenic
AATGAACATGAACTACCACC+TGG 0.605194 3.1:+38286449 MS.gene82720:CDS
CTTTGCTAGCGACCAAGAGA+GGG 0.606477 3.1:+38289987 MS.gene82720:CDS
GAAACTTCTGAAGGGCCGGA+TGG 0.607806 3.1:+38284922 MS.gene82720:CDS
CAAAGAAAAGAAGAACACCT+TGG 0.609634 3.1:+38288850 MS.gene82720:CDS
AGTACCAATTCTGTTGCCAA+TGG 0.610914 3.1:+38288160 MS.gene82720:CDS
TTTCTATGGTGGAATGACAA+TGG 0.611799 3.1:+38288760 MS.gene82720:CDS
CTAGTTGAACTAAATCTGCA+TGG 0.612220 3.1:+38287942 MS.gene82720:CDS
TAGGAGTTTGCAAGAGACTG+AGG 0.618731 3.1:+38290020 MS.gene82720:CDS
TCAGTTGATCAAGGATCGCA+CGG 0.618974 3.1:+38288078 MS.gene82720:intron
CATTGGTCAATGCGACACTC+AGG 0.620652 3.1:+38285254 MS.gene82720:CDS
GAGGATTGGCTTTATGAGGA+CGG 0.621172 3.1:+38290039 MS.gene82720:CDS
TCCCTCTTGAAACTTCTGAA+GGG 0.622092 3.1:+38284914 MS.gene82720:CDS
TAGTCTCGAACACGGTATGT+GGG 0.623188 3.1:-38285798 None:intergenic
GGCCCTTCAGAAGTTTCAAG+AGG 0.625597 3.1:-38284916 None:intergenic
CTACCTTGAGATCCATGCAT+AGG 0.630694 3.1:-38287900 None:intergenic
GCCCTTCAGAAGTTTCAAGA+GGG 0.636685 3.1:-38284915 None:intergenic
GAGTTGAAATGAGTGTGGTA+GGG 0.636902 3.1:+38284647 None:intergenic
AGTGTGGTAGGGTTTGACAT+TGG 0.639158 3.1:+38284658 MS.gene82720:CDS
TCTGCTTTGGAGAGAAGCAG+CGG 0.659423 3.1:+38284770 MS.gene82720:CDS
CTAAACTGAGCATACCGTGA+AGG 0.666297 3.1:-38286492 None:intergenic
TGAGAACTGTGTTATTGCTG+TGG 0.670838 3.1:+38284684 MS.gene82720:CDS
TCCAAAGCAGACGACAGCCG+GGG 0.672114 3.1:-38284758 None:intergenic
GTGAATGAGAATTTCTATGG+TGG 0.675812 3.1:+38288749 MS.gene82720:CDS
GAGACGGGCATATCTTGATG+CGG 0.681093 3.1:+38285110 MS.gene82720:CDS
AAACCTCATAGTCTCGAACA+CGG 0.692771 3.1:-38285806 None:intergenic
GCATCCCATTCCAAATACTG+TGG 0.702591 3.1:+38286376 MS.gene82720:CDS
AAGGTGAGTTGAAATGAGTG+TGG 0.703610 3.1:+38284642 None:intergenic
ATTGCTGTGGCAAAGCATCG+CGG 0.704864 3.1:+38284697 MS.gene82720:CDS
GCAAGTGAGTGTGTAGCTCG+TGG 0.714591 3.1:+38285747 MS.gene82720:CDS
AGTCCTATGTCTATGAGACG+AGG 0.719415 3.1:+38288873 MS.gene82720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTATCTTATATTTTTTAT+TGG + chr3.1:38289379-38289398 MS.gene82720:intron 10.0%
!!! TTATTATTTTTTTGAATTTC+AGG + chr3.1:38286899-38286918 MS.gene82720:intron 10.0%
!!! TTTCTAAGAAATATTAAAAA+CGG + chr3.1:38287387-38287406 MS.gene82720:intron 10.0%
!! ACAAATATAAACTAATCTTA+AGG - chr3.1:38290558-38290577 None:intergenic 15.0%
!! ACACTAATATAAGAAAATAA+AGG - chr3.1:38286711-38286730 None:intergenic 15.0%
!! CATGAAATAAGATAAAAATT+TGG - chr3.1:38289884-38289903 None:intergenic 15.0%
!! TCATAATTTATACCAAAAAA+TGG - chr3.1:38288015-38288034 None:intergenic 15.0%
!!! AAAAAAAAAAGGAAAAGTAT+TGG - chr3.1:38287478-38287497 None:intergenic 15.0%
!!! TTCTAAGAAATATTAAAAAC+GGG + chr3.1:38287388-38287407 MS.gene82720:intron 15.0%
!!! TTTTGTTTTATGAATTGTTA+AGG - chr3.1:38286944-38286963 None:intergenic 15.0%
!! AAAACTTACATAGATATAGA+CGG + chr3.1:38286961-38286980 MS.gene82720:intron 20.0%
!! AACATAAATCAGACAATATT+TGG - chr3.1:38287558-38287577 None:intergenic 20.0%
!! AGAAAAAGAAAAAGAAAGAA+AGG - chr3.1:38288270-38288289 None:intergenic 20.0%
!! AGAATATATTATGACATAAG+TGG - chr3.1:38287311-38287330 None:intergenic 20.0%
!! ATATATTCTATCATTAGAAC+AGG + chr3.1:38290610-38290629 MS.gene82720:intron 20.0%
!! ATGCTTACAAATATAATGTA+TGG - chr3.1:38287533-38287552 None:intergenic 20.0%
!! ATTATAAATAACAGCTCAAA+AGG - chr3.1:38286796-38286815 None:intergenic 20.0%
!! CATCACAGTTATATATTATA+AGG - chr3.1:38287239-38287258 None:intergenic 20.0%
!! CTAATGTTGTAAAACTAATT+AGG + chr3.1:38287702-38287721 MS.gene82720:intron 20.0%
!! GGATTAAAATAAAAACTTCA+TGG + chr3.1:38289733-38289752 MS.gene82720:intron 20.0%
!! TAAAAAGTAAAACAGTTGTT+CGG - chr3.1:38289151-38289170 None:intergenic 20.0%
!! TGGATACACAAAAAAAAAAA+AGG - chr3.1:38287489-38287508 None:intergenic 20.0%
!! TTATAAATAACAGCTCAAAA+GGG - chr3.1:38286795-38286814 None:intergenic 20.0%
!! TTTGTAAATTCCATAACTAA+GGG - chr3.1:38285190-38285209 None:intergenic 20.0%
!!! AGTTAGAAATTTAACTTGAA+TGG + chr3.1:38287590-38287609 MS.gene82720:intron 20.0%
!!! AGTTTATATTTGTCATTTTC+TGG + chr3.1:38290565-38290584 MS.gene82720:intron 20.0%
!!! CTTAAGATAAGCTTTTAATT+GGG + chr3.1:38290358-38290377 MS.gene82720:intron 20.0%
!!! CTTTCTTTTTCTTTTTCTTT+TGG + chr3.1:38288272-38288291 MS.gene82720:intron 20.0%
!!! GGTTTTATTTTTCCATTTTT+TGG + chr3.1:38288000-38288019 MS.gene82720:intron 20.0%
!!! TCTTAAGATAAGCTTTTAAT+TGG + chr3.1:38290357-38290376 MS.gene82720:intron 20.0%
!!! TTGTCTGATTTATGTTTTAT+TGG + chr3.1:38287562-38287581 MS.gene82720:intron 20.0%
!!! TTTCTTAGAAACTTTGTTTT+AGG - chr3.1:38287378-38287397 None:intergenic 20.0%
!!! TTTGTTTCATTTGAAATACT+TGG + chr3.1:38284951-38284970 MS.gene82720:CDS 20.0%
!!! TTTTGTAAATTCCATAACTA+AGG - chr3.1:38285191-38285210 None:intergenic 20.0%
!!! TTTTTTTTTTTTGTGTATCC+AGG + chr3.1:38287488-38287507 MS.gene82720:intron 20.0%
! AAAACTAGAAGATCTGAAAA+AGG + chr3.1:38290092-38290111 MS.gene82720:CDS 25.0%
! AATCTTAAGGAAAACAGAAA+GGG - chr3.1:38290545-38290564 None:intergenic 25.0%
! ACAAACCCATAAATGTAATA+TGG + chr3.1:38288516-38288535 MS.gene82720:intron 25.0%
! AGATTGTCTAAGAAAAGATA+AGG + chr3.1:38288703-38288722 MS.gene82720:CDS 25.0%
! AGCATCACAATAATATATAG+TGG - chr3.1:38290335-38290354 None:intergenic 25.0%
! ATATGACTTGACCATAATAT+TGG - chr3.1:38290483-38290502 None:intergenic 25.0%
! CACTTTACTTGATAAAGTTA+TGG - chr3.1:38289701-38289720 None:intergenic 25.0%
! CATAACTTTATCAAGTAAAG+TGG + chr3.1:38289699-38289718 MS.gene82720:intron 25.0%
! GATTGCCATATTACATTTAT+GGG - chr3.1:38288524-38288543 None:intergenic 25.0%
! TAATCTTAAGGAAAACAGAA+AGG - chr3.1:38290546-38290565 None:intergenic 25.0%
! TATGAAATATTATCTGCACA+GGG + chr3.1:38289841-38289860 MS.gene82720:intron 25.0%
! TATGACTTGACCATAATATT+GGG - chr3.1:38290482-38290501 None:intergenic 25.0%
! TATGTTGCATTTATTGACAT+TGG + chr3.1:38285237-38285256 MS.gene82720:CDS 25.0%
! TCTTATCCTATATATTGCAT+AGG + chr3.1:38288489-38288508 MS.gene82720:intron 25.0%
! TGATTGCCATATTACATTTA+TGG - chr3.1:38288525-38288544 None:intergenic 25.0%
! TTGTAAAACTAATTAGGCAT+TGG + chr3.1:38287708-38287727 MS.gene82720:intron 25.0%
!! AAAACAAATTTTCACAGTGA+TGG + chr3.1:38285207-38285226 MS.gene82720:CDS 25.0%
!! CTTTTAATATGAGAATCCAA+AGG - chr3.1:38289642-38289661 None:intergenic 25.0%
!! TATGAATTGTTAAGGTATCT+AGG - chr3.1:38286936-38286955 None:intergenic 25.0%
!! TCATTTTGCTGAAAAATTCA+AGG + chr3.1:38285374-38285393 MS.gene82720:CDS 25.0%
!! TGCTGAAAATAAACCTTTTA+AGG - chr3.1:38286130-38286149 None:intergenic 25.0%
!! TTCATTTGAAATACTTGGAT+GGG + chr3.1:38284956-38284975 MS.gene82720:CDS 25.0%
!! TTGCTAAAAGGAAGTATATA+TGG + chr3.1:38287772-38287791 MS.gene82720:intron 25.0%
!! TTTCATTTGAAATACTTGGA+TGG + chr3.1:38284955-38284974 MS.gene82720:CDS 25.0%
!!! AAATTTAACTTGAATGGATC+TGG + chr3.1:38287596-38287615 MS.gene82720:intron 25.0%
!!! AATTTAACTTGAATGGATCT+GGG + chr3.1:38287597-38287616 MS.gene82720:intron 25.0%
!!! ATAAGTGGAAACTCTTATTT+TGG - chr3.1:38287296-38287315 None:intergenic 25.0%
!!! GATATTAGTCCTTTTTCATA+TGG + chr3.1:38286293-38286312 MS.gene82720:CDS 25.0%
!!! TCATTCAAATTTTGATGCAA+TGG + chr3.1:38288108-38288127 MS.gene82720:CDS 25.0%
!!! TTTGTCATTTTCTGGTTATA+TGG + chr3.1:38290573-38290592 MS.gene82720:intron 25.0%
AAATTCTCATTCACTGCAAT+AGG - chr3.1:38288743-38288762 None:intergenic 30.0%
AACAGCTCTTTAACACATAT+CGG + chr3.1:38289962-38289981 MS.gene82720:intron 30.0%
AAGGCATGAAAACAATTCTT+CGG - chr3.1:38289767-38289786 None:intergenic 30.0%
AATCCAAAGGATATCATTAG+GGG - chr3.1:38289629-38289648 None:intergenic 30.0%
ACAAAGTCTATACCTAATTC+AGG - chr3.1:38287637-38287656 None:intergenic 30.0%
ACAGTACTTACATAACTTTG+TGG - chr3.1:38288217-38288236 None:intergenic 30.0%
ACTTGATAAAGTTATGGCAT+GGG - chr3.1:38289695-38289714 None:intergenic 30.0%
AGAATCCAAAGGATATCATT+AGG - chr3.1:38289631-38289650 None:intergenic 30.0%
AGCATAGACATTATTTGAAC+TGG - chr3.1:38284997-38285016 None:intergenic 30.0%
AGTATCCTTAAACAAAGACT+TGG + chr3.1:38287122-38287141 MS.gene82720:intron 30.0%
ATGAAAAAGGACTAATATCC+TGG - chr3.1:38286292-38286311 None:intergenic 30.0%
ATGGATGAGAAAGATGTTAA+GGG + chr3.1:38285519-38285538 MS.gene82720:CDS 30.0%
CATGAAATAACCTATGAGTA+TGG + chr3.1:38287432-38287451 MS.gene82720:intron 30.0%
CTATGAAATATTATCTGCAC+AGG + chr3.1:38289840-38289859 MS.gene82720:intron 30.0%
GAAACATGTTGAGTTACATA+GGG - chr3.1:38287335-38287354 None:intergenic 30.0%
GAATCCAAAGGATATCATTA+GGG - chr3.1:38289630-38289649 None:intergenic 30.0%
GACTATGACAGAAAAAGATT+TGG + chr3.1:38285032-38285051 MS.gene82720:CDS 30.0%
GATTGAAGTCCATATGAAAA+AGG - chr3.1:38286305-38286324 None:intergenic 30.0%
GTCTATCCTATGCAATATAT+AGG - chr3.1:38288498-38288517 None:intergenic 30.0%
TACTTGATAAAGTTATGGCA+TGG - chr3.1:38289696-38289715 None:intergenic 30.0%
TATGACAGAAAAAGATTTGG+AGG + chr3.1:38285035-38285054 MS.gene82720:CDS 30.0%
TCCAAAAATTAGTTCCTTCA+CGG + chr3.1:38286478-38286497 MS.gene82720:CDS 30.0%
TCTGGTTATATGGTTTGATT+TGG + chr3.1:38290583-38290602 MS.gene82720:intron 30.0%
TGAAACATGTTGAGTTACAT+AGG - chr3.1:38287336-38287355 None:intergenic 30.0%
TGGTATATGCTAGAACATTA+TGG - chr3.1:38289318-38289337 None:intergenic 30.0%
TGTTGAATGATGAATCGAAA+CGG + chr3.1:38284731-38284750 MS.gene82720:CDS 30.0%
! ACTCTTTTGCTGATGTAAAA+TGG + chr3.1:38286174-38286193 MS.gene82720:intron 30.0%
! TATGCTCAGTTTAGAACATT+TGG + chr3.1:38286501-38286520 MS.gene82720:intron 30.0%
! TTGTTGTTGTGTGAATTCAA+AGG - chr3.1:38289238-38289257 None:intergenic 30.0%
! TTTCTGTCATACCATTTTAC+AGG + chr3.1:38288679-38288698 MS.gene82720:intron 30.0%
!! AACCTTTTAAGGATAAACCT+AGG - chr3.1:38286119-38286138 None:intergenic 30.0%
!! ATTTAACTTGAATGGATCTG+GGG + chr3.1:38287598-38287617 MS.gene82720:intron 30.0%
!! TAACTGGAGTTCTTTTTCAT+GGG - chr3.1:38288801-38288820 None:intergenic 30.0%
!!! ATCTTACCTGTTCTTTTTTC+TGG - chr3.1:38290302-38290321 None:intergenic 30.0%
!!! GGTGTTTTGTTTTTAGTACT+AGG + chr3.1:38286628-38286647 MS.gene82720:intron 30.0%
!!! TAAAAACGGGTTACTCTTTT+GGG + chr3.1:38287401-38287420 MS.gene82720:intron 30.0%
!!! TCTTACCTGTTCTTTTTTCT+GGG - chr3.1:38290301-38290320 None:intergenic 30.0%
!!! TTAAAAACGGGTTACTCTTT+TGG + chr3.1:38287400-38287419 MS.gene82720:intron 30.0%
!!! TTTCAGATCTTCTAGTTTTG+AGG - chr3.1:38290091-38290110 None:intergenic 30.0%
AAAGGATATCATTAGGGGTT+AGG - chr3.1:38289624-38289643 None:intergenic 35.0%
AAATCTCTTCACTTGCGATA+TGG - chr3.1:38284845-38284864 None:intergenic 35.0%
AAATGTTATGTGGGGTAAGA+TGG - chr3.1:38289473-38289492 None:intergenic 35.0%
AACAGAATTGGTACTATCTG+AGG - chr3.1:38288155-38288174 None:intergenic 35.0%
AACATGTTTCAAGAAGCTCT+CGG + chr3.1:38287345-38287364 MS.gene82720:intron 35.0%
AAGTAAAACAGTTGTTCGGT+TGG - chr3.1:38289147-38289166 None:intergenic 35.0%
AAGTGAAGAGATTTATAGGC+AGG + chr3.1:38284851-38284870 MS.gene82720:CDS 35.0%
AATATTGGGTCGACATTCTT+AGG - chr3.1:38290468-38290487 None:intergenic 35.0%
ACTCACTTGCATTCAACTTT+CGG - chr3.1:38285737-38285756 None:intergenic 35.0%
ACTTGAAGGGTGAAAAACAA+CGG - chr3.1:38289549-38289568 None:intergenic 35.0%
AGAATGTCGACCCAATATTA+TGG + chr3.1:38290469-38290488 MS.gene82720:CDS 35.0%
AGATCTAGAGATCAATGAGT+TGG - chr3.1:38289350-38289369 None:intergenic 35.0%
ATAACCTATGAGTATGGTGT+CGG + chr3.1:38287438-38287457 MS.gene82720:intron 35.0%
ATCAGACACTCGATATTTAG+CGG - chr3.1:38285501-38285520 None:intergenic 35.0%
ATCCCTTCACAAATTGCATA+TGG - chr3.1:38285957-38285976 None:intergenic 35.0%
ATTTATAGGCAGGAGATTTC+TGG + chr3.1:38284861-38284880 MS.gene82720:CDS 35.0%
CAAAGAAAAGAAGAACACCT+TGG + chr3.1:38288850-38288869 MS.gene82720:CDS 35.0%
CAGCTACAGAAATAGTAGAT+TGG - chr3.1:38290169-38290188 None:intergenic 35.0%
CTAGTTGAACTAAATCTGCA+TGG + chr3.1:38287942-38287961 MS.gene82720:CDS 35.0%
GAATCAATAGCACAAGAATG+TGG - chr3.1:38287807-38287826 None:intergenic 35.0%
GAATCTTGCATCTGGATTAT+TGG + chr3.1:38285566-38285585 MS.gene82720:CDS 35.0%
GAATTTGAGAATCTTGCATC+TGG + chr3.1:38285558-38285577 MS.gene82720:CDS 35.0%
GATAATAATGCACTTACTGC+AGG - chr3.1:38285690-38285709 None:intergenic 35.0%
GATCTAGAGATCAATGAGTT+GGG - chr3.1:38289349-38289368 None:intergenic 35.0%
GATGGATGAGAAAGATGTTA+AGG + chr3.1:38285518-38285537 MS.gene82720:CDS 35.0%
GCAATTTCTCATGTTTGTTC+AGG + chr3.1:38286265-38286284 MS.gene82720:intron 35.0%
GCAGTGAATGAGAATTTCTA+TGG + chr3.1:38288746-38288765 MS.gene82720:CDS 35.0%
GTACTACATATCCACTATCT+AGG - chr3.1:38286843-38286862 None:intergenic 35.0%
GTATAGACTTTGTTGCTATG+AGG + chr3.1:38287644-38287663 MS.gene82720:intron 35.0%
GTGAATGAGAATTTCTATGG+TGG + chr3.1:38288749-38288768 MS.gene82720:CDS 35.0%
GTTGAATGATGAATCGAAAC+GGG + chr3.1:38284732-38284751 MS.gene82720:CDS 35.0%
TAACCCCTAATGATATCCTT+TGG + chr3.1:38289623-38289642 MS.gene82720:intron 35.0%
TAGAAGAACTGAGATGTTTC+AGG + chr3.1:38287087-38287106 MS.gene82720:intron 35.0%
TAGACAATCTGCCTGTAAAA+TGG - chr3.1:38288693-38288712 None:intergenic 35.0%
TCAATTAATGCTTCGTTGCA+AGG - chr3.1:38285606-38285625 None:intergenic 35.0%
TCGCAAGTGAAGAGATTTAT+AGG + chr3.1:38284847-38284866 MS.gene82720:CDS 35.0%
TCTTTGTACCGAATCTCAAT+TGG - chr3.1:38290198-38290217 None:intergenic 35.0%
TGATGTGTATTCTAATGCCA+AGG + chr3.1:38285410-38285429 MS.gene82720:CDS 35.0%
TGCCTAGGTTTATCCTTAAA+AGG + chr3.1:38286114-38286133 MS.gene82720:intron 35.0%
TTAGAGCCAACGTTGTTAAA+TGG + chr3.1:38285879-38285898 MS.gene82720:intron 35.0%
TTGATTCAGCTACAGTAAGT+AGG + chr3.1:38287976-38287995 MS.gene82720:intron 35.0%
TTTGTTTAAGGATACTCCTC+GGG - chr3.1:38287118-38287137 None:intergenic 35.0%
! AACGAAGCATTAATTGAAGC+AGG + chr3.1:38285609-38285628 MS.gene82720:CDS 35.0%
! AAGACCACAGTATTTGGAAT+GGG - chr3.1:38286383-38286402 None:intergenic 35.0%
! AAGGAAGTGCAAATGTTATG+TGG - chr3.1:38289483-38289502 None:intergenic 35.0%
! ACCGTGAAGGAACTAATTTT+TGG - chr3.1:38286482-38286501 None:intergenic 35.0%
! AGGAAGTGCAAATGTTATGT+GGG - chr3.1:38289482-38289501 None:intergenic 35.0%
! ATGGCATGGGTTCTTTAAAA+AGG - chr3.1:38289682-38289701 None:intergenic 35.0%
! ATGGTGTACTTTTCCCAAAA+GGG + chr3.1:38286354-38286373 MS.gene82720:CDS 35.0%
! CATCGACATCACTGATTATT+GGG + chr3.1:38286040-38286059 MS.gene82720:intron 35.0%
! CTACTACACAAACTTTTCTG+TGG - chr3.1:38286740-38286759 None:intergenic 35.0%
! CTTTGTTTAAGGATACTCCT+CGG - chr3.1:38287119-38287138 None:intergenic 35.0%
! TACTTTCACATGCTTTTGAC+AGG + chr3.1:38285313-38285332 MS.gene82720:CDS 35.0%
! TCAGACCAAGTCTTTGTTTA+AGG - chr3.1:38287130-38287149 None:intergenic 35.0%
! TCATATTAAGAGCGCAATAG+AGG + chr3.1:38290497-38290516 MS.gene82720:CDS 35.0%
! TGTTTCAGATCAAGTGTTGT+CGG + chr3.1:38289054-38289073 MS.gene82720:intron 35.0%
! TTCAGATCCTTTTCCATATC+AGG - chr3.1:38284889-38284908 None:intergenic 35.0%
! TTGACCACTTCTTTTCAGAT+CGG + chr3.1:38287876-38287895 MS.gene82720:intron 35.0%
! TTTCTATGGTGGAATGACAA+TGG + chr3.1:38288760-38288779 MS.gene82720:CDS 35.0%
!! CAAGGTGTTCTTCTTTTCTT+TGG - chr3.1:38288852-38288871 None:intergenic 35.0%
!! CAATCTACTATTTCTGTAGC+TGG + chr3.1:38290167-38290186 MS.gene82720:intron 35.0%
!! CTAACTGGAGTTCTTTTTCA+TGG - chr3.1:38288802-38288821 None:intergenic 35.0%
!! CTAATTTTTGGAAACGTTCC+AGG - chr3.1:38286470-38286489 None:intergenic 35.0%
!!! AGTAAAGTGGAAGTTTTGAG+TGG + chr3.1:38289712-38289731 MS.gene82720:intron 35.0%
!!! CTTACCTGTTCTTTTTTCTG+GGG - chr3.1:38290300-38290319 None:intergenic 35.0%
!!! TTCCAACACAAGGTTTTAGA+GGG - chr3.1:38289523-38289542 None:intergenic 35.0%
AAAAAACCAAGTTGCTGCCT+AGG + chr3.1:38286099-38286118 MS.gene82720:intron 40.0%
AAACCTCATAGTCTCGAACA+CGG - chr3.1:38285809-38285828 None:intergenic 40.0%
AAGAGAGGGATGTCATATCT+AGG + chr3.1:38290001-38290020 MS.gene82720:CDS 40.0%
AAGCTATGAAGCCTAGATAG+TGG + chr3.1:38286829-38286848 MS.gene82720:intron 40.0%
AATGAACATGAACTACCACC+TGG + chr3.1:38286449-38286468 MS.gene82720:CDS 40.0%
ACATGTTTCAAGAAGCTCTC+GGG + chr3.1:38287346-38287365 MS.gene82720:intron 40.0%
ACCAATAACACAATCCGAGA+TGG - chr3.1:38285064-38285083 None:intergenic 40.0%
ACGGAGTATGCTTGTAAAGA+GGG + chr3.1:38286980-38286999 MS.gene82720:intron 40.0%
ACGTTGTTAAATGGAAGCGA+TGG + chr3.1:38285888-38285907 MS.gene82720:intron 40.0%
AGCATGCGCAATAACTAACA+AGG - chr3.1:38286598-38286617 None:intergenic 40.0%
AGCATTAATTGAAGCAGGCT+TGG + chr3.1:38285614-38285633 MS.gene82720:CDS 40.0%
AGCTTATAGACTATGAAGCC+TGG - chr3.1:38287509-38287528 None:intergenic 40.0%
AGGAGTTAAGTCACTTAAGC+AGG - chr3.1:38288250-38288269 None:intergenic 40.0%
AGTACCAATTCTGTTGCCAA+TGG + chr3.1:38288160-38288179 MS.gene82720:CDS 40.0%
AGTGGATATGTAGTACGACA+TGG + chr3.1:38286847-38286866 MS.gene82720:intron 40.0%
ATAACAACCTGTATGCATGC+AGG - chr3.1:38287841-38287860 None:intergenic 40.0%
ATAATCAGTGATGTCGATGG+CGG - chr3.1:38286039-38286058 None:intergenic 40.0%
ATTCAGCTACAGTAAGTAGG+AGG + chr3.1:38287979-38287998 MS.gene82720:intron 40.0%
ATTTCTTCTGTGGAGCTAGT+TGG + chr3.1:38285648-38285667 MS.gene82720:CDS 40.0%
CAATAACTAACAAGGAAGGG+GGG - chr3.1:38286590-38286609 None:intergenic 40.0%
CAGCAAAAGAGTAATAGCAG+TGG - chr3.1:38286166-38286185 None:intergenic 40.0%
CAGTCATGTATCAGTCTCAA+AGG - chr3.1:38285156-38285175 None:intergenic 40.0%
CATTGCAAGACACCTGAATT+AGG + chr3.1:38287622-38287641 MS.gene82720:intron 40.0%
CCAATAACACAATCCGAGAT+GGG - chr3.1:38285063-38285082 None:intergenic 40.0%
CCAATAATCAGTGATGTCGA+TGG - chr3.1:38286042-38286061 None:intergenic 40.0%
CCTTCACAAATTGCATATGG+CGG - chr3.1:38285954-38285973 None:intergenic 40.0%
CGAATTTCTGATAGACCAGA+TGG + chr3.1:38286335-38286354 MS.gene82720:CDS 40.0%
CGCAATAACTAACAAGGAAG+GGG - chr3.1:38286592-38286611 None:intergenic 40.0%
CGCCATATGCAATTTGTGAA+GGG + chr3.1:38285952-38285971 MS.gene82720:intron 40.0%
CGTGCACTTTCTTTGCTAAA+AGG + chr3.1:38287760-38287779 MS.gene82720:intron 40.0%
CGTTGTTAAATGGAAGCGAT+GGG + chr3.1:38285889-38285908 MS.gene82720:intron 40.0%
CTAATTCAGGTGTCTTGCAA+TGG - chr3.1:38287624-38287643 None:intergenic 40.0%
GAAAAGATAAGGCGAACAGA+AGG + chr3.1:38288714-38288733 MS.gene82720:CDS 40.0%
GAACAGGTAAGATAACTAGC+AGG + chr3.1:38290309-38290328 MS.gene82720:intron 40.0%
GAAGACCACAGTATTTGGAA+TGG - chr3.1:38286384-38286403 None:intergenic 40.0%
GAAGAGAAGAATCCACAGTA+GGG - chr3.1:38289593-38289612 None:intergenic 40.0%
GATTGGAAGACCACAGTATT+TGG - chr3.1:38286389-38286408 None:intergenic 40.0%
GCAAGTCTGTGAAGTATGAT+GGG - chr3.1:38285089-38285108 None:intergenic 40.0%
GCAATAACTAACAAGGAAGG+GGG - chr3.1:38286591-38286610 None:intergenic 40.0%
GCCATATAAACATGCCATTG+CGG - chr3.1:38286002-38286021 None:intergenic 40.0%
GCGCAATAACTAACAAGGAA+GGG - chr3.1:38286593-38286612 None:intergenic 40.0%
GCTAAATATCGAGTGTCTGA+TGG + chr3.1:38285500-38285519 MS.gene82720:CDS 40.0%
GGAGTTAAGTCACTTAAGCA+GGG - chr3.1:38288249-38288268 None:intergenic 40.0%
GTGCTTTAACTACCATCCAT+AGG + chr3.1:38289418-38289437 MS.gene82720:intron 40.0%
GTGGATATGTAGTACGACAT+GGG + chr3.1:38286848-38286867 MS.gene82720:intron 40.0%
GTTGTTAAATGGAAGCGATG+GGG + chr3.1:38285890-38285909 MS.gene82720:intron 40.0%
TACATTACCTGCATGCATAC+AGG + chr3.1:38287831-38287850 MS.gene82720:intron 40.0%
TAGATATGACATCCCTCTCT+TGG - chr3.1:38290002-38290021 None:intergenic 40.0%
TATGTAGTACGACATGGGTA+TGG + chr3.1:38286853-38286872 MS.gene82720:intron 40.0%
TCCAAATGGGACAAATCAGT+TGG - chr3.1:38286416-38286435 None:intergenic 40.0%
TCCCTCTTGAAACTTCTGAA+GGG + chr3.1:38284914-38284933 MS.gene82720:CDS 40.0%
TCGCTTCCATTTAACAACGT+TGG - chr3.1:38285888-38285907 None:intergenic 40.0%
TCTGGATCCTGATATGGAAA+AGG + chr3.1:38284879-38284898 MS.gene82720:CDS 40.0%
TGCAAGTCTGTGAAGTATGA+TGG - chr3.1:38285090-38285109 None:intergenic 40.0%
TGCAGAGAAGATTTCTTCTG+TGG + chr3.1:38285638-38285657 MS.gene82720:CDS 40.0%
TGCGCAATAACTAACAAGGA+AGG - chr3.1:38286594-38286613 None:intergenic 40.0%
TGCGTAGAAAGCTTCCAAAT+GGG - chr3.1:38286429-38286448 None:intergenic 40.0%
TTAGCAATGAAGCAGAGCAT+TGG + chr3.1:38290409-38290428 MS.gene82720:CDS 40.0%
TTGATGCGGCAATAATTGCT+GGG + chr3.1:38285124-38285143 MS.gene82720:CDS 40.0%
TTGCGTAGAAAGCTTCCAAA+TGG - chr3.1:38286430-38286449 None:intergenic 40.0%
TTGTGGAGAATCACGCTTAT+TGG - chr3.1:38288200-38288219 None:intergenic 40.0%
! ACTTGCGATATGGTTGACTT+TGG - chr3.1:38284835-38284854 None:intergenic 40.0%
! AGTTAAAGCACTAGAGGTAG+AGG - chr3.1:38289409-38289428 None:intergenic 40.0%
! ATGCTTTTGACAGGAGCTTA+GGG + chr3.1:38285322-38285341 MS.gene82720:CDS 40.0%
! ATTGGTACTATCTGAGGTCT+CGG - chr3.1:38288149-38288168 None:intergenic 40.0%
! CAATGAGTTGGGTAGAGATA+TGG - chr3.1:38289338-38289357 None:intergenic 40.0%
! CATTTGAGTTTGGGCAAATG+AGG + chr3.1:38285289-38285308 MS.gene82720:CDS 40.0%
! CCATCGACATCACTGATTAT+TGG + chr3.1:38286039-38286058 MS.gene82720:intron 40.0%
! CGTCTATAGAAAGCTGATTC+TGG - chr3.1:38287742-38287761 None:intergenic 40.0%
! CTTGCGATATGGTTGACTTT+GGG - chr3.1:38284834-38284853 None:intergenic 40.0%
! GAGATTTCTGGATCCTGATA+TGG + chr3.1:38284873-38284892 MS.gene82720:CDS 40.0%
! GATGGTAGTTAAAGCACTAG+AGG - chr3.1:38289415-38289434 None:intergenic 40.0%
! GATGGTGTACTTTTCCCAAA+AGG + chr3.1:38286353-38286372 MS.gene82720:CDS 40.0%
! GCATTGCAGCATTTGAGTTT+GGG + chr3.1:38285280-38285299 MS.gene82720:CDS 40.0%
! GGAAGTGCAAATGTTATGTG+GGG - chr3.1:38289481-38289500 None:intergenic 40.0%
! GTTGTGCACAAACTTTTGTG+TGG + chr3.1:38288053-38288072 MS.gene82720:intron 40.0%
! TATGAGTATGGTGTCGGATA+CGG + chr3.1:38287444-38287463 MS.gene82720:intron 40.0%
! TGAGAACTGTGTTATTGCTG+TGG + chr3.1:38284684-38284703 MS.gene82720:CDS 40.0%
! TGCATTGCAGCATTTGAGTT+TGG + chr3.1:38285279-38285298 MS.gene82720:CDS 40.0%
! TGGTGGATCCAATTGAGATT+CGG + chr3.1:38290187-38290206 MS.gene82720:CDS 40.0%
! TTTGGGAAAAGTACACCATC+TGG - chr3.1:38286353-38286372 None:intergenic 40.0%
!! AAGCAGTTCGAGTTTTGCAA+GGG - chr3.1:38289807-38289826 None:intergenic 40.0%
!! ACAAATCAGTTGGCTTGGAT+TGG - chr3.1:38286406-38286425 None:intergenic 40.0%
!! ATCTAGTGCTGACACTTGAA+GGG - chr3.1:38289562-38289581 None:intergenic 40.0%
!! ATTTTTGGAAACGTTCCAGG+TGG - chr3.1:38286467-38286486 None:intergenic 40.0%
!! CTTCCAACACAAGGTTTTAG+AGG - chr3.1:38289524-38289543 None:intergenic 40.0%
!! TAAGCAGTTCGAGTTTTGCA+AGG - chr3.1:38289808-38289827 None:intergenic 40.0%
!! TCTACTATTTCTGTAGCTGG+TGG + chr3.1:38290170-38290189 MS.gene82720:intron 40.0%
!!! AGATCAAGTGTTGTCGGTTT+TGG + chr3.1:38289060-38289079 MS.gene82720:intron 40.0%
!!! AGTTTTGAGTGCAAATCCAG+AGG + chr3.1:38285473-38285492 MS.gene82720:CDS 40.0%
!!! TTCTTTTTTCTGGGGTGGAA+CGG - chr3.1:38290292-38290311 None:intergenic 40.0%
AAACACCGGAGAAGATCCTA+TGG - chr3.1:38289437-38289456 None:intergenic 45.0%
ACAACGGATCTTCCAACACA+AGG - chr3.1:38289533-38289552 None:intergenic 45.0%
ACCATCCATAGGATCTTCTC+CGG + chr3.1:38289429-38289448 MS.gene82720:intron 45.0%
ACTCCTCGTCTCATAGACAT+AGG - chr3.1:38288879-38288898 None:intergenic 45.0%
ACTGCAACTGCCCTTAGTTA+TGG + chr3.1:38285177-38285196 MS.gene82720:CDS 45.0%
ACTTCACAGACTTGCAGAGA+CGG + chr3.1:38285094-38285113 MS.gene82720:CDS 45.0%
AGAACTCCAGTTAGCTCAAC+AGG + chr3.1:38288808-38288827 MS.gene82720:CDS 45.0%
AGGACCGATCTGAAAAGAAG+TGG - chr3.1:38287883-38287902 None:intergenic 45.0%
AGTCCTATGTCTATGAGACG+AGG + chr3.1:38288873-38288892 MS.gene82720:CDS 45.0%
AGTGTGGTAGGGTTTGACAT+TGG + chr3.1:38284658-38284677 MS.gene82720:CDS 45.0%
ATACCGTGTTCGAGACTATG+AGG + chr3.1:38285803-38285822 MS.gene82720:CDS 45.0%
ATAGTCTCGAACACGGTATG+TGG - chr3.1:38285802-38285821 None:intergenic 45.0%
ATGGGACAAATCAGTTGGCT+TGG - chr3.1:38286411-38286430 None:intergenic 45.0%
CATGTTTCAAGAAGCTCTCG+GGG + chr3.1:38287347-38287366 MS.gene82720:intron 45.0%
CCCATCTCGGATTGTGTTAT+TGG + chr3.1:38285060-38285079 MS.gene82720:CDS 45.0%
CCGCCATATGCAATTTGTGA+AGG + chr3.1:38285951-38285970 MS.gene82720:intron 45.0%
CGAAGAGAAGAATCCACAGT+AGG - chr3.1:38289594-38289613 None:intergenic 45.0%
CTAAACTGAGCATACCGTGA+AGG - chr3.1:38286495-38286514 None:intergenic 45.0%
CTACCTTGAGATCCATGCAT+AGG - chr3.1:38287903-38287922 None:intergenic 45.0%
CTCATAGACATAGGACTCCA+AGG - chr3.1:38288870-38288889 None:intergenic 45.0%
CTCCCTCTTGAAACTTCTGA+AGG + chr3.1:38284913-38284932 MS.gene82720:CDS 45.0%
CTTGATGCGGCAATAATTGC+TGG + chr3.1:38285123-38285142 MS.gene82720:CDS 45.0%
CTTGCATTCAACTTTCGGCT+CGG - chr3.1:38285732-38285751 None:intergenic 45.0%
GACGGAGTATGCTTGTAAAG+AGG + chr3.1:38286979-38286998 MS.gene82720:intron 45.0%
GATAAACCTAGGCAGCAACT+TGG - chr3.1:38286108-38286127 None:intergenic 45.0%
GCACATGGGGATTAAAACAC+CGG - chr3.1:38289451-38289470 None:intergenic 45.0%
GCATCCCATTCCAAATACTG+TGG + chr3.1:38286376-38286395 MS.gene82720:CDS 45.0%
GCATGGATCTCAAGGTAGTA+AGG + chr3.1:38287905-38287924 MS.gene82720:CDS 45.0%
GCCCTTCAGAAGTTTCAAGA+GGG - chr3.1:38284918-38284937 None:intergenic 45.0%
GCCGCAATGGCATGTTTATA+TGG + chr3.1:38285998-38286017 MS.gene82720:intron 45.0%
GGATATCATTAGGGGTTAGG+AGG - chr3.1:38289621-38289640 None:intergenic 45.0%
GGTATGGTAAGATGCGTACA+AGG + chr3.1:38286869-38286888 MS.gene82720:intron 45.0%
GTATCCGACACCATACTCAT+AGG - chr3.1:38287445-38287464 None:intergenic 45.0%
GTTTATGCAGTCAGACACTG+AGG + chr3.1:38288978-38288997 MS.gene82720:intron 45.0%
GTTTGCAAGAGACTGAGGAT+TGG + chr3.1:38290025-38290044 MS.gene82720:CDS 45.0%
TAGGAGTTTGCAAGAGACTG+AGG + chr3.1:38290020-38290039 MS.gene82720:CDS 45.0%
TAGTCTCGAACACGGTATGT+GGG - chr3.1:38285801-38285820 None:intergenic 45.0%
TCACAAATTGCATATGGCGG+TGG - chr3.1:38285951-38285970 None:intergenic 45.0%
TCAGTTGATCAAGGATCGCA+CGG + chr3.1:38288078-38288097 MS.gene82720:intron 45.0%
TCCACCCCAGAAAAAAGAAC+AGG + chr3.1:38290293-38290312 MS.gene82720:CDS 45.0%
TCTCATGTTTGTTCAGGTCC+AGG + chr3.1:38286271-38286290 MS.gene82720:intron 45.0%
TGAAACAAAACGCCACCATC+CGG - chr3.1:38284940-38284959 None:intergenic 45.0%
TGTCTATGAGACGAGGAGTA+AGG + chr3.1:38288880-38288899 MS.gene82720:CDS 45.0%
TGTGTGGCTTCAGTTGATCA+AGG + chr3.1:38288069-38288088 MS.gene82720:intron 45.0%
TTTCAGATCGGTCCTATGCA+TGG + chr3.1:38287888-38287907 MS.gene82720:intron 45.0%
TTTGTGAAGGGATCTCACCA+TGG + chr3.1:38285964-38285983 MS.gene82720:intron 45.0%
! AGCTAGTTGGTTCAGGTTCT+AGG + chr3.1:38285661-38285680 MS.gene82720:CDS 45.0%
! CATGCTTTTGACAGGAGCTT+AGG + chr3.1:38285321-38285340 MS.gene82720:CDS 45.0%
! GAGAGAAGCAGCGGTTTTTA+GGG + chr3.1:38284779-38284798 MS.gene82720:CDS 45.0%
! TCTTGAAACTTCTGAAGGGC+CGG + chr3.1:38284918-38284937 MS.gene82720:CDS 45.0%
! TGCTTTTGACAGGAGCTTAG+GGG + chr3.1:38285323-38285342 MS.gene82720:CDS 45.0%
! TTGGAATGGGATGCCCTTTT+GGG - chr3.1:38286370-38286389 None:intergenic 45.0%
!! AGAGCATTGGCTAACAGAGA+AGG + chr3.1:38290422-38290441 MS.gene82720:CDS 45.0%
!! CTCCCTCTAAAACCTTGTGT+TGG + chr3.1:38289518-38289537 MS.gene82720:intron 45.0%
!! GACTGAGGATTGGCTTTATG+AGG + chr3.1:38290035-38290054 MS.gene82720:CDS 45.0%
!! GAGGATTGGCTTTATGAGGA+CGG + chr3.1:38290039-38290058 MS.gene82720:CDS 45.0%
!! GATCTAGTGCTGACACTTGA+AGG - chr3.1:38289563-38289582 None:intergenic 45.0%
!! GCCAACTGATTTGTCCCATT+TGG + chr3.1:38286412-38286431 MS.gene82720:CDS 45.0%
!! TTTGGAATGGGATGCCCTTT+TGG - chr3.1:38286371-38286390 None:intergenic 45.0%
!!! ACCTGTTCTTTTTTCTGGGG+TGG - chr3.1:38290297-38290316 None:intergenic 45.0%
!!! AGGTTTTAGAGGGAGGTCTT+TGG - chr3.1:38289513-38289532 None:intergenic 45.0%
!!! CAACACAAGGTTTTAGAGGG+AGG - chr3.1:38289520-38289539 None:intergenic 45.0%
!!! GGTTTTAGAGGGAGGTCTTT+GGG - chr3.1:38289512-38289531 None:intergenic 45.0%
AAACATGCCATTGCGGCCTA+TGG - chr3.1:38285995-38286014 None:intergenic 50.0%
ACCGGAGAAGATCCTATGGA+TGG - chr3.1:38289433-38289452 None:intergenic 50.0%
ACGCAGTCTAATGCAAGCCT+TGG - chr3.1:38285430-38285449 None:intergenic 50.0%
AGATCCACAGAACCCTACTG+TGG + chr3.1:38289578-38289597 MS.gene82720:intron 50.0%
AGCCTAATCCCACCACTTAG+TGG + chr3.1:38289267-38289286 MS.gene82720:intron 50.0%
AGCGCCATTGGCAACAGAAT+TGG - chr3.1:38288167-38288186 None:intergenic 50.0%
ATGTAGCCAACCCCACTAAG+TGG - chr3.1:38289282-38289301 None:intergenic 50.0%
ATGTGGGGTAAGATGGCACA+TGG - chr3.1:38289466-38289485 None:intergenic 50.0%
CATTGGTCAATGCGACACTC+AGG + chr3.1:38285254-38285273 MS.gene82720:CDS 50.0%
CCTAATCCCACCACTTAGTG+GGG + chr3.1:38289269-38289288 MS.gene82720:intron 50.0%
CTCTGTCCTGTTGAGCTAAC+TGG - chr3.1:38288817-38288836 None:intergenic 50.0%
CTTCACAGACTTGCAGAGAC+GGG + chr3.1:38285095-38285114 MS.gene82720:CDS 50.0%
CTTTGCTAGCGACCAAGAGA+GGG + chr3.1:38289987-38290006 MS.gene82720:CDS 50.0%
GAATCCACAGTAGGGTTCTG+TGG - chr3.1:38289585-38289604 None:intergenic 50.0%
GAGACGGGCATATCTTGATG+CGG + chr3.1:38285110-38285129 MS.gene82720:CDS 50.0%
GCCTAATCCCACCACTTAGT+GGG + chr3.1:38289268-38289287 MS.gene82720:intron 50.0%
GCGCAATAGAGGAGCTAAAC+AGG + chr3.1:38290508-38290527 MS.gene82720:CDS 50.0%
GGCCCTTCAGAAGTTTCAAG+AGG - chr3.1:38284919-38284938 None:intergenic 50.0%
GGTACTATCTTCAGCGCCAT+TGG - chr3.1:38288179-38288198 None:intergenic 50.0%
GGTCCTATGCATGGATCTCA+AGG + chr3.1:38287897-38287916 MS.gene82720:CDS 50.0%
TCGATATTTAGCGGTGCCTC+TGG - chr3.1:38285492-38285511 None:intergenic 50.0%
TGAATCGAAACGGGAAACCC+CGG + chr3.1:38284741-38284760 MS.gene82720:CDS 50.0%
TGAGACGAGGAGTAAGGTAC+TGG + chr3.1:38288886-38288905 MS.gene82720:intron 50.0%
TGTGGGGTAAGATGGCACAT+GGG - chr3.1:38289465-38289484 None:intergenic 50.0%
TTGCGCATGCTCTTCTGTCT+TGG + chr3.1:38286607-38286626 MS.gene82720:intron 50.0%
! CTAAGTGGTGGGATTAGGCT+TGG - chr3.1:38289267-38289286 None:intergenic 50.0%
! CTATCTGAGGTCTCGGACTT+AGG - chr3.1:38288142-38288161 None:intergenic 50.0%
! CTTTTGACAGGAGCTTAGGG+GGG + chr3.1:38285325-38285344 MS.gene82720:CDS 50.0%
! GCTTTTGACAGGAGCTTAGG+GGG + chr3.1:38285324-38285343 MS.gene82720:CDS 50.0%
! GGAGAGAAGCAGCGGTTTTT+AGG + chr3.1:38284778-38284797 MS.gene82720:CDS 50.0%
! GTTTTGCAAGGGTCGTGAGT+CGG - chr3.1:38289796-38289815 None:intergenic 50.0%
! TCTGTGGAGCTAGTTGGTTC+AGG + chr3.1:38285654-38285673 MS.gene82720:CDS 50.0%
! TTTTGCAAGGGTCGTGAGTC+GGG - chr3.1:38289795-38289814 None:intergenic 50.0%
!! AGATTTGGAGGCACCCATCT+CGG + chr3.1:38285047-38285066 MS.gene82720:CDS 50.0%
!! ATTGCTGTGGCAAAGCATCG+CGG + chr3.1:38284697-38284716 MS.gene82720:CDS 50.0%
!! TCTGCTTTGGAGAGAAGCAG+CGG + chr3.1:38284770-38284789 MS.gene82720:CDS 50.0%
AGCCAACCCCACTAAGTGGT+GGG - chr3.1:38289278-38289297 None:intergenic 55.0%
AGCTCAACAGGACAGAGCTG+TGG + chr3.1:38288820-38288839 MS.gene82720:CDS 55.0%
ATCCCACCACTTAGTGGGGT+TGG + chr3.1:38289273-38289292 MS.gene82720:intron 55.0%
GCAAGTGAGTGTGTAGCTCG+TGG + chr3.1:38285747-38285766 MS.gene82720:CDS 55.0%
GCTTTGCTAGCGACCAAGAG+AGG + chr3.1:38289986-38290005 MS.gene82720:CDS 55.0%
GTGAAGGGATCTCACCATGG+TGG + chr3.1:38285967-38285986 MS.gene82720:intron 55.0%
GTGGGGTAAGATGGCACATG+GGG - chr3.1:38289464-38289483 None:intergenic 55.0%
TAGCCAACCCCACTAAGTGG+TGG - chr3.1:38289279-38289298 None:intergenic 55.0%
TCTCCAAAGCAGACGACAGC+CGG - chr3.1:38284763-38284782 None:intergenic 55.0%
! CCCCACTAAGTGGTGGGATT+AGG - chr3.1:38289272-38289291 None:intergenic 55.0%
! GAAACTTCTGAAGGGCCGGA+TGG + chr3.1:38284922-38284941 MS.gene82720:CDS 55.0%
! GGAGGTCTTTGGGAGCTACA+AGG - chr3.1:38289502-38289521 None:intergenic 55.0%
!! GATGTTTCAGGAAGTGCCCG+AGG + chr3.1:38287099-38287118 MS.gene82720:intron 55.0%
!! TCAGTGATGTCGATGGCGGA+AGG - chr3.1:38286035-38286054 None:intergenic 55.0%
!! TTGCTGTGGCAAAGCATCGC+GGG + chr3.1:38284698-38284717 MS.gene82720:CDS 55.0%
!!! CAGCGGTTTTTAGGGTCTGC+TGG + chr3.1:38284787-38284806 MS.gene82720:CDS 55.0%
AGCACCACGCCACTACACCA+TGG - chr3.1:38285919-38285938 None:intergenic 60.0%
ATGGGGCTGCCATGGTGTAG+TGG + chr3.1:38285907-38285926 MS.gene82720:intron 60.0%
CTCCAAAGCAGACGACAGCC+GGG - chr3.1:38284762-38284781 None:intergenic 60.0%
GGTCGTGAGTCGGGACAGAA+AGG - chr3.1:38289786-38289805 None:intergenic 60.0%
TCCAAAGCAGACGACAGCCG+GGG - chr3.1:38284761-38284780 None:intergenic 60.0%
TGACAGGAGCTTAGGGGGGA+GGG + chr3.1:38285329-38285348 MS.gene82720:CDS 60.0%
TTGACAGGAGCTTAGGGGGG+AGG + chr3.1:38285328-38285347 MS.gene82720:CDS 60.0%
! ACTTCTGAAGGGCCGGATGG+TGG + chr3.1:38284925-38284944 MS.gene82720:CDS 60.0%
! TCTCACCATGGTGGCGCCAT+AGG + chr3.1:38285976-38285995 MS.gene82720:intron 60.0%
ACCCCGGCTGTCGTCTGCTT+TGG + chr3.1:38284757-38284776 MS.gene82720:CDS 65.0%
AGGGGGGAGGGACTTTGACG+AGG + chr3.1:38285341-38285360 MS.gene82720:CDS 65.0%
GCTGCCATGGTGTAGTGGCG+TGG + chr3.1:38285912-38285931 MS.gene82720:intron 65.0%
TGGAAGCGATGGGGCTGCCA+TGG + chr3.1:38285899-38285918 MS.gene82720:intron 65.0%
GGTGGCGCCATAGGCCGCAA+TGG + chr3.1:38285985-38286004 MS.gene82720:intron 70.0%
TGCGGCCTATGGCGCCACCA+TGG - chr3.1:38285984-38286003 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 38284655 38290638 38284655 ID=MS.gene82720
chr3.1 mRNA 38284655 38290638 38284655 ID=MS.gene82720.t1;Parent=MS.gene82720
chr3.1 exon 38284655 38285692 38284655 ID=MS.gene82720.t1.exon1;Parent=MS.gene82720.t1
chr3.1 CDS 38284655 38285692 38284655 ID=cds.MS.gene82720.t1;Parent=MS.gene82720.t1
chr3.1 exon 38285723 38285824 38285723 ID=MS.gene82720.t1.exon2;Parent=MS.gene82720.t1
chr3.1 CDS 38285723 38285824 38285723 ID=cds.MS.gene82720.t1;Parent=MS.gene82720.t1
chr3.1 exon 38286287 38286499 38286287 ID=MS.gene82720.t1.exon3;Parent=MS.gene82720.t1
chr3.1 CDS 38286287 38286499 38286287 ID=cds.MS.gene82720.t1;Parent=MS.gene82720.t1
chr3.1 exon 38287894 38287989 38287894 ID=MS.gene82720.t1.exon4;Parent=MS.gene82720.t1
chr3.1 CDS 38287894 38287989 38287894 ID=cds.MS.gene82720.t1;Parent=MS.gene82720.t1
chr3.1 exon 38288082 38288225 38288082 ID=MS.gene82720.t1.exon5;Parent=MS.gene82720.t1
chr3.1 CDS 38288082 38288225 38288082 ID=cds.MS.gene82720.t1;Parent=MS.gene82720.t1
chr3.1 exon 38288701 38288901 38288701 ID=MS.gene82720.t1.exon6;Parent=MS.gene82720.t1
chr3.1 CDS 38288701 38288901 38288701 ID=cds.MS.gene82720.t1;Parent=MS.gene82720.t1
chr3.1 exon 38289967 38290113 38289967 ID=MS.gene82720.t1.exon7;Parent=MS.gene82720.t1
chr3.1 CDS 38289967 38290113 38289967 ID=cds.MS.gene82720.t1;Parent=MS.gene82720.t1
chr3.1 exon 38290186 38290314 38290186 ID=MS.gene82720.t1.exon8;Parent=MS.gene82720.t1
chr3.1 CDS 38290186 38290314 38290186 ID=cds.MS.gene82720.t1;Parent=MS.gene82720.t1
chr3.1 exon 38290399 38290529 38290399 ID=MS.gene82720.t1.exon9;Parent=MS.gene82720.t1
chr3.1 CDS 38290399 38290529 38290399 ID=cds.MS.gene82720.t1;Parent=MS.gene82720.t1
chr3.1 exon 38290632 38290638 38290632 ID=MS.gene82720.t1.exon10;Parent=MS.gene82720.t1
chr3.1 CDS 38290632 38290638 38290632 ID=cds.MS.gene82720.t1;Parent=MS.gene82720.t1
Gene Sequence

>MS.gene82720

ATGAGTGTGGTAGGGTTTGACATTGGTAATGAGAACTGTGTTATTGCTGTGGCAAAGCATCGCGGGATTGATGTTTTGTTGAATGATGAATCGAAACGGGAAACCCCGGCTGTCGTCTGCTTTGGAGAGAAGCAGCGGTTTTTAGGGTCTGCTGGTGCTGCTTCTGCTATGATGCACCCAAAGTCAACCATATCGCAAGTGAAGAGATTTATAGGCAGGAGATTTCTGGATCCTGATATGGAAAAGGATCTGAAAATGCTCCCTCTTGAAACTTCTGAAGGGCCGGATGGTGGCGTTTTGTTTCATTTGAAATACTTGGATGGGATTCATACGTTTACGCCAGTTCAAATAATGTCTATGCTCTTTGCTCACTTGAAGACTATGACAGAAAAAGATTTGGAGGCACCCATCTCGGATTGTGTTATTGGTATCCCATCATACTTCACAGACTTGCAGAGACGGGCATATCTTGATGCGGCAATAATTGCTGGGTTGAAGCCTTTGAGACTGATACATGACTGTACTGCAACTGCCCTTAGTTATGGAATTTACAAAACAAATTTTCACAGTGATGGTTCAAGTTATGTTGCATTTATTGACATTGGTCAATGCGACACTCAGGTCTGCATTGCAGCATTTGAGTTTGGGCAAATGAGGATACTTTCACATGCTTTTGACAGGAGCTTAGGGGGGAGGGACTTTGACGAGGTTCTGTTTACTCATTTTGCTGAAAAATTCAAGGAACAGTACAAAATTGATGTGTATTCTAATGCCAAGGCTTGCATTAGACTGCGTGCTGCATGTGAGAAATTGAAGAAAGTTTTGAGTGCAAATCCAGAGGCACCGCTAAATATCGAGTGTCTGATGGATGAGAAAGATGTTAAGGGTTTTATAACAAGAGAAGAATTTGAGAATCTTGCATCTGGATTATTGGAGAGAATTTCAGTACCTTGCAACGAAGCATTAATTGAAGCAGGCTTGGATGCAGAGAAGATTTCTTCTGTGGAGCTAGTTGGTTCAGGTTCTAGGATTCCTGCAGTAAGTGCATTATTATCTTCTTTATTCAAGAGAGAACCGAGCCGAAAGTTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTACAGTGTGCTATGCTCAGTCCCACATACCGTGTTCGAGACTATGAGGTTTGTTTATTTTTAAGTCTATTCATATTCTATGTCTATGTTATATATTGCAGATTAGAGCCAACGTTGTTAAATGGAAGCGATGGGGCTGCCATGGTGTAGTGGCGTGGTGCTTTTTTTTGACCACCGCCATATGCAATTTGTGAAGGGATCTCACCATGGTGGCGCCATAGGCCGCAATGGCATGTTTATATGGCAGATTTTTGACCTTCCGCCATCGACATCACTGATTATTGGGTTTCTAGATTCTTAGAAATGTAATTTAACAATTGTCAAAAAACCAAGTTGCTGCCTAGGTTTATCCTTAAAAGGTTTATTTTCAGCATTTAAATTATCTTCCACTGCTATTACTCTTTTGCTGATGTAAAATGGAATTTTTGTTATTTTGATTTCTGATTGATATTGTCTTTTTTTTTAATGTTGTACTCGTTTAAATCGATGCAATTTCTCATGTTTGTTCAGGTCCAGGATATTAGTCCTTTTTCATATGGACTTCAATCAGATAAAGTTCGAATTTCTGATAGACCAGATGGTGTACTTTTCCCAAAAGGGCATCCCATTCCAAATACTGTGGTCTTCCAATCCAAGCCAACTGATTTGTCCCATTTGGAAGCTTTCTACGCAAATGAACATGAACTACCACCTGGAACGTTTCCAAAAATTAGTTCCTTCACGGTATGCTCAGTTTAGAACATTTGGCTAATGTGATAAAGTTAAATTTTCTTCTGCGAATGTTTTATTTGTTATGTATTTCTTCTCACTCCCCCCTTCCTTGTTAGTTATTGCGCATGCTCTTCTGTCTTGGTGTTTTGTTTTTAGTACTAGGCGTGTAGTATAGCTTCTATGTGAGATATTTTATTATGTAAATCTGTGAGCTTTTTTACCTTTATTTTCTTATATTAGTGTTTAAATCCACAGAAAAGTTTGTGTAGTAGATATTTTCATCATTAGCACAATCAAGAGCTTTCCCTTTTGAGCTGTTATTTATAATAATCTATTTATAGAAGCTATGAAGCCTAGATAGTGGATATGTAGTACGACATGGGTATGGTAAGATGCGTACAAGGATTATTATTATTATTTTTTTGAATTTCAGGATACTATATAGCCTAGATACCTTAACAATTCATAAAACAAAAACTTACATAGATATAGACGGAGTATGCTTGTAAAGAGGGATACATTGATCATTCTGTAGTAGTATATCACGCTTTCTAAAAAGATAAGTTCTGCTAGAATATTATCAACAAAAGTACATTTAGTAGAAGAACTGAGATGTTTCAGGAAGTGCCCGAGGAGTATCCTTAAACAAAGACTTGGTCTGATACAACACATGTAACTTAACAAATTTTATAGAACAAACAATTTGTGTAGATGTAGAATGTTTGTAAAAGAACATACACTCATCATTCCTTATAATATATAACTGTGATGATCACAATTTATAAAAAGATACTTGTGATCATAACCAAAATAAGAGTTTCCACTTATGTCATAATATATTCTACCCTATGTAACTCAACATGTTTCAAGAAGCTCTCGGGGAGTATCCTAAAACAAAGTTTCTAAGAAATATTAAAAACGGGTTACTCTTTTGGGACATGTATCATGAAATAACCTATGAGTATGGTGTCGGATACGGATACAACACCAATACTTTTCCTTTTTTTTTTTTGTGTATCCAGGCTTCATAGTCTATAAGCTGCCATACATTATATTTGTAAGCATCTCCAAATATTGTCTGATTTATGTTTTATTGGCATCAAGTTAGAAATTTAACTTGAATGGATCTGGGGCCATTGCAAGACACCTGAATTAGGTATAGACTTTGTTGCTATGAGGTCTGTGATTATTGCTTGTTCTGACATCAGAGAAAGCTAATGTTGTAAAACTAATTAGGCATTGGAATAAAAGCCAGAATCAGCTTTCTATAGACGTGCACTTTCTTTGCTAAAAGGAAGTATATATGGTAGATTTAGCCACATTCTTGTGCTATTGATTCAGTGTACATTACCTGCATGCATACAGGTTGTTATATGCTTACACATTTGTTGACCACTTCTTTTCAGATCGGTCCTATGCATGGATCTCAAGGTAGTAAGGCAAAAGTTAAAGTTCTAGTTGAACTAAATCTGCATGGCATTTTCAGTATTGATTCAGCTACAGTAAGTAGGAGGTTTTATTTTTCCATTTTTTGGTATAAATTATGATTTTTTCTGAGACATCTAGTTGTGCACAAACTTTTGTGTGGCTTCAGTTGATCAAGGATCGCACGGATGATGATCATTCAAATTTTGATGCAATGGATGTTGATCCTAAGTCCGAGACCTCAGATAGTACCAATTCTGTTGCCAATGGCGCTGAAGATAGTACCAATAAGCGTGATTCTCCACAAAGTTATGTAAGTACTGTCATGTTAATCCCTGCTTAAGTGACTTAACTCCTTTCTTTCTTTTTCTTTTTCTTTTGGAGAGATATCAGATGTTAGAGATTTCTAGTAAATTTATCATTTGAGCATGAAAAGTTTTATAGAAGTAGAGCTTTTCTATCATATGCGAACTTACATAGTATAAGAAGTCAAAACTTGTAAATGTTAATATTAAATACATTTTGTAATAATTGTTGTTTTCAAGAAAAAAAATTACTAGTTTTAGTCGTCTTAACTCTTATCCTATATATTGCATAGGATAGACAAACCCATAAATGTAATATGGCAATCATTTTTTATGACAAATTCTGAGACATCTGTTATGACTGACTTTCACAATCATAGTATGCTTAGTTTTTTATTTTATTTTATCTTGTAGTGATAGTTTTGATTGTAGATATGTTTTTTTTAAGTAAATAACAGTTTTTTCTGTCATACCATTTTACAGGCAGATTGTCTAAGAAAAGATAAGGCGAACAGAAGGATTCCTATTGCAGTGAATGAGAATTTCTATGGTGGAATGACAATGGAAGAGATTTCTGAAGCCCATGAAAAAGAACTCCAGTTAGCTCAACAGGACAGAGCTGTGGAGCTAACCAAAGAAAAGAAGAACACCTTGGAGTCCTATGTCTATGAGACGAGGAGTAAGGTACTGGTTAAAAATATAAATAAGACACAATTGATTCATGATACTTGTTTATGCTGAGTCAAGAAAAACGATACTTGTTTATGCAGTCAGACACTGAGGTTTTGAGTGACTGTGTTTTCATTTTATAATTTTAAAAAGCAATTTTGAAAAACTGTTTCAGATCAAGTGTTGTCGGTTTTGGCTTTTTACTTTTAAAAATATGAAATAAGAAACTGTTTTGTAAAACATTTTTAGAAAACATACCAACCGAACAACTGTTTTACTTTTTAAAAACAGAAAATAGTTTTAAAATGCAGTGATTAAAAAGACATGAACTTTACTACACTGTTTTATCCTTTGAATTCACACAACAACAAAAACAACCAAGCCTAATCCCACCACTTAGTGGGGTTGGCTACATTGATTGATTGACACCATAATGTTCTAGCATATACCATATCTCTACCCAACTCATTGATCTCTAGATCTTTCTTTATAGATTATCTTATATTTTTTATTGGTCTTCCTCTACCTCTAGTGCTTTAACTACCATCCATAGGATCTTCTCCGGTGTTTTAATCCCCATGTGCCATCTTACCCCACATAACATTTGCACTTCCTTGTAGCTCCCAAAGACCTCCCTCTAAAACCTTGTGTTGGAAGATCCGTTGTTTTTCACCCTTCAAGTGTCAGCACTAGATCCACAGAACCCTACTGTGGATTCTTCTCTTCGCTTTCCTCCTAACCCCTAATGATATCCTTTGGATTCTCATATTAAAAGAAAAAATGTTAGATGCTCCTTTTTAAAGAACCCATGCCATAACTTTATCAAGTAAAGTGGAAGTTTTGAGTGGATTAAAATAAAAACTTCATGGTTTAATTACCGAAGAATTGTTTTCATGCCTTTCTGTCCCGACTCACGACCCTTGCAAAACTCGAACTGCTTAGCTGTTACAATACTATGAAATATTATCTGCACAGGGTCTCAAATTTCAAATTTCCAAATTTTTATCTTATTTCATGCTACTGATTTTATGCATGCATTTGAAGATTCTGTTAATTAAATTAATTTGCATACATAAACAGCTCTTTAACACATATCGGAGCTTTGCTAGCGACCAAGAGAGGGATGTCATATCTAGGAGTTTGCAAGAGACTGAGGATTGGCTTTATGAGGACGGTGATGATGAAACTGAACACGCTTATACCTCAAAACTAGAAGATCTGAAAAAGGTATTTTTTTGCTTTTCTATTTTCAATGTCTCTCTTGTTATACTTATTGTTTCCAATCTACTATTTCTGTAGCTGGTGGATCCAATTGAGATTCGGTACAAAGATGATGAAGAAAGAACACAAGCTATAAAAGATTTATCAAAATTCATTTCAGATATTCGCAAGTTTGCAGATTCCGTTCCACCCCAGAAAAAAGAACAGGTAAGATAACTAGCAGGCCACTATATATTATTGTGATGCTGCTCTTAAGATAAGCTTTTAATTGGGATTTTATTTTATTTTCAGATCATTGATATTAGCAATGAAGCAGAGCATTGGCTAACAGAGAAGGTGCAACAACAAGAATCTTATCCTAAGAATGTCGACCCAATATTATGGTCAAGTCATATTAAGAGCGCAATAGAGGAGCTAAACAGGTATAATGCTTACCCTTTCTGTTTTCCTTAAGATTAGTTTATATTTGTCATTTTCTGGTTATATGGTTTGATTTGGTTTGATATATTCTATCATTAGAACAGGAAATGA
Protein sequence

>MS.gene82720.t1

MSVVGFDIGNENCVIAVAKHRGIDVLLNDESKRETPAVVCFGEKQRFLGSAGAASAMMHPKSTISQVKRFIGRRFLDPDMEKDLKMLPLETSEGPDGGVLFHLKYLDGIHTFTPVQIMSMLFAHLKTMTEKDLEAPISDCVIGIPSYFTDLQRRAYLDAAIIAGLKPLRLIHDCTATALSYGIYKTNFHSDGSSYVAFIDIGQCDTQVCIAAFEFGQMRILSHAFDRSLGGRDFDEVLFTHFAEKFKEQYKIDVYSNAKACIRLRAACEKLKKVLSANPEAPLNIECLMDEKDVKGFITREEFENLASGLLERISVPCNEALIEAGLDAEKISSVELVGSGSRIPAREPSRKLNASECVARGCALQCAMLSPTYRVRDYEVQDISPFSYGLQSDKVRISDRPDGVLFPKGHPIPNTVVFQSKPTDLSHLEAFYANEHELPPGTFPKISSFTIGPMHGSQGSKAKVKVLVELNLHGIFSIDSATLIKDRTDDDHSNFDAMDVDPKSETSDSTNSVANGAEDSTNKRDSPQSYADCLRKDKANRRIPIAVNENFYGGMTMEEISEAHEKELQLAQQDRAVELTKEKKNTLESYVYETRSKLFNTYRSFASDQERDVISRSLQETEDWLYEDGDDETEHAYTSKLEDLKKLVDPIEIRYKDDEERTQAIKDLSKFISDIRKFADSVPPQKKEQIIDISNEAEHWLTEKVQQQESYPKNVDPILWSSHIKSAIEELNRK