AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61204


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61204.t1 MTR_2g102180 97.902 858 18 0 1 858 1 858 0.0 1741
MS.gene61204.t1 MTR_4g012050 80.349 860 158 5 1 858 1 851 0.0 1338
MS.gene61204.t1 MTR_5g092570 50.820 793 343 8 1 787 1 752 0.0 793
MS.gene61204.t1 MTR_3g051300 50.000 790 345 5 1 786 1 744 0.0 779
MS.gene61204.t1 MTR_7g099680 33.970 471 292 6 4 469 10 466 1.30e-85 286
MS.gene61204.t1 MTR_4g063710 33.839 461 287 5 4 459 10 457 6.36e-84 282
MS.gene61204.t1 MTR_7g024390 34.932 438 269 4 4 438 10 434 8.54e-84 281
MS.gene61204.t1 MTR_4g130540 34.703 438 270 4 4 438 9 433 4.89e-83 280
MS.gene61204.t1 MTR_7g024580 33.839 461 287 5 4 459 10 457 1.22e-82 278
MS.gene61204.t1 MTR_4g063720 32.909 471 297 6 4 469 10 466 1.74e-81 275
MS.gene61204.t1 MTR_6g033955 34.598 448 268 6 4 441 10 442 4.26e-81 275
MS.gene61204.t1 MTR_6g033760 36.406 434 258 7 4 433 10 429 9.81e-80 270
MS.gene61204.t1 MTR_8g032650 34.483 464 277 8 4 463 10 450 1.17e-76 262
MS.gene61204.t1 MTR_6g033820 33.933 445 269 6 4 438 10 439 1.98e-76 263
MS.gene61204.t1 MTR_3g081170 27.910 842 510 26 2 780 25 832 2.19e-76 267
MS.gene61204.t1 MTR_6g033850 34.332 434 265 6 4 432 10 428 2.25e-76 262
MS.gene61204.t1 MTR_7g078190 35.185 432 264 5 4 431 10 429 7.89e-76 259
MS.gene61204.t1 MTR_7g025760 33.257 439 276 5 4 438 10 435 1.18e-75 259
MS.gene61204.t1 MTR_7g024030 34.169 439 272 7 4 438 10 435 1.64e-75 258
MS.gene61204.t1 MTR_7g026030 33.716 436 270 6 4 434 10 431 1.65e-75 259
MS.gene61204.t1 MTR_6g033870 33.257 439 271 6 4 433 11 436 2.07e-75 259
MS.gene61204.t1 MTR_8g099945 32.759 464 289 7 2 459 37 483 4.44e-75 258
MS.gene61204.t1 MTR_2g038260 33.636 440 276 6 4 439 10 437 1.44e-74 256
MS.gene61204.t1 MTR_7g025790 33.621 464 281 8 4 463 10 450 2.38e-74 255
MS.gene61204.t1 MTR_7g025740 33.775 453 276 8 4 452 10 442 4.38e-74 255
MS.gene61204.t1 MTR_7g451380 35.233 386 244 5 4 385 10 393 4.48e-74 254
MS.gene61204.t1 MTR_7g029415 33.933 445 274 8 4 442 17 447 5.58e-74 254
MS.gene61204.t1 MTR_8g099795 32.112 464 292 7 2 459 37 483 1.95e-73 254
MS.gene61204.t1 MTR_2g040370 35.620 379 240 2 4 381 1030 1405 2.63e-73 263
MS.gene61204.t1 MTR_2g040370 33.947 380 246 3 4 381 1414 1790 2.35e-61 227
MS.gene61204.t1 MTR_2g040370 35.620 379 240 2 4 381 1030 1405 2.98e-73 263
MS.gene61204.t1 MTR_2g040370 33.947 380 246 3 4 381 1414 1790 2.58e-61 227
MS.gene61204.t1 MTR_7g025820 33.258 442 278 5 4 441 10 438 3.74e-73 251
MS.gene61204.t1 MTR_5g066800 34.867 413 253 5 4 401 10 421 4.04e-73 252
MS.gene61204.t1 MTR_7g021440 37.008 381 236 4 4 381 10 389 1.66e-72 250
MS.gene61204.t1 MTR_7g026170 33.793 435 272 6 4 434 10 432 1.78e-72 250
MS.gene61204.t1 MTR_7g026110 34.091 440 270 8 4 438 10 434 3.70e-72 249
MS.gene61204.t1 MTR_2g032550 33.636 440 275 6 4 439 11 437 4.21e-72 249
MS.gene61204.t1 MTR_7g025770 33.251 403 264 5 4 402 10 411 2.24e-71 247
MS.gene61204.t1 MTR_7g025720 32.731 443 279 6 4 441 10 438 3.22e-71 247
MS.gene61204.t1 MTR_2g017730 32.273 440 276 5 4 434 9 435 7.89e-71 245
MS.gene61204.t1 MTR_2g040160 35.770 383 242 2 4 385 1110 1489 8.77e-71 255
MS.gene61204.t1 MTR_2g040260 35.248 383 244 2 4 385 1039 1418 8.96e-71 255
MS.gene61204.t1 MTR_7g026130 32.176 432 279 5 4 431 10 431 3.69e-70 246
MS.gene61204.t1 MTR_2g437440 32.166 457 287 7 4 455 10 448 7.22e-70 243
MS.gene61204.t1 MTR_7g025620 32.426 441 281 5 2 438 8 435 8.23e-70 243
MS.gene61204.t1 MTR_7g026090 32.353 442 274 6 4 438 10 433 9.82e-70 243
MS.gene61204.t1 MTR_4g079590 31.481 432 279 6 4 431 10 428 3.39e-69 241
MS.gene61204.t1 MTR_7g078210 32.564 433 275 5 4 432 10 429 6.30e-69 241
MS.gene61204.t1 MTR_2g032580 32.870 432 273 5 4 431 10 428 7.92e-69 239
MS.gene61204.t1 MTR_7g025630 35.433 381 228 5 4 381 10 375 4.51e-67 235
MS.gene61204.t1 MTR_2g022050 34.286 385 249 3 4 385 10 393 3.13e-66 233
MS.gene61204.t1 MTR_2g010020 33.416 404 251 5 3 401 56 446 5.39e-66 233
MS.gene61204.t1 MTR_2g010020 33.416 404 251 5 3 401 57 447 5.43e-66 233
MS.gene61204.t1 MTR_2g038270 31.448 442 277 8 3 431 9 437 2.10e-65 231
MS.gene61204.t1 MTR_7g451360 32.987 385 224 4 4 385 10 363 3.75e-65 228
MS.gene61204.t1 MTR_7g011590 32.587 402 254 5 4 401 10 398 4.51e-65 229
MS.gene61204.t1 MTR_2g040350 34.278 388 247 3 3 385 1038 1422 2.47e-64 236
MS.gene61204.t1 MTR_2g040350 34.278 388 247 3 3 385 820 1204 3.37e-64 235
MS.gene61204.t1 MTR_4g027145 31.613 465 282 10 4 450 10 456 4.41e-63 224
MS.gene61204.t1 MTR_8g103930 32.812 448 257 10 4 436 12 430 4.49e-63 224
MS.gene61204.t1 MTR_7g025260 33.753 397 246 6 42 434 20 403 1.82e-62 222
MS.gene61204.t1 MTR_4g092920 31.188 404 261 5 3 401 53 444 2.52e-62 223
MS.gene61204.t1 MTR_2g032160 33.424 368 239 4 4 367 10 375 3.26e-62 218
MS.gene61204.t1 MTR_2g040220 34.031 382 239 6 4 378 1019 1394 3.61e-61 226
MS.gene61204.t1 MTR_7g026140 31.266 403 256 6 4 402 10 395 5.73e-61 218
MS.gene61204.t1 MTR_1g017130 28.276 435 257 7 4 434 10 393 4.19e-58 209
MS.gene61204.t1 MTR_1g077230 37.455 275 167 3 4 275 10 282 4.58e-56 195
MS.gene61204.t1 MTR_6g033800 34.891 321 203 4 84 401 1 318 7.25e-56 203
MS.gene61204.t1 MTR_7g035155 31.266 403 219 6 4 402 10 358 1.39e-55 202
MS.gene61204.t1 MTR_7g074460 29.864 442 275 8 4 441 10 420 1.37e-54 199
MS.gene61204.t1 MTR_2g005690 30.700 443 275 9 3 438 71 488 6.91e-54 200
MS.gene61204.t1 MTR_7g007000 27.952 415 261 7 4 401 10 403 2.99e-50 187
MS.gene61204.t1 MTR_4g063720 28.200 461 242 12 4 459 10 386 1.60e-48 182
MS.gene61204.t1 MTR_1g041565 30.221 407 226 11 4 406 6 358 6.71e-46 173
MS.gene61204.t1 MTR_4g092920 30.435 322 208 4 84 401 1 310 4.78e-44 168
MS.gene61204.t1 MTR_6g034005 29.114 395 259 7 74 465 2 378 1.22e-43 169
MS.gene61204.t1 MTR_7g026080 34.177 237 153 3 4 238 10 245 3.34e-43 158
MS.gene61204.t1 MTR_2g031670 33.036 224 149 1 15 238 45 267 3.44e-36 140
MS.gene61204.t1 MTR_4g088515 33.600 250 145 4 4 251 277 507 4.32e-35 142
MS.gene61204.t1 MTR_6g033810 28.479 309 169 3 99 404 29 288 2.52e-34 133
MS.gene61204.t1 MTR_1207s0010 37.430 179 110 2 100 278 1 177 2.06e-33 127
MS.gene61204.t1 MTR_7g026180 40.833 120 71 0 68 187 21 140 5.61e-25 107
MS.gene61204.t1 MTR_5g097190 33.714 175 103 3 4 176 159 322 1.03e-24 107
MS.gene61204.t1 MTR_6g478100 28.767 219 141 3 30 248 10 213 2.26e-22 99.4
MS.gene61204.t1 MTR_1g016250 63.636 77 21 1 617 686 1 77 7.94e-21 87.8
MS.gene61204.t1 MTR_5g006180 23.214 448 301 12 4 438 30 447 9.54e-19 91.3
MS.gene61204.t1 MTR_4g107920 23.881 402 263 13 4 383 21 401 7.90e-18 88.2
MS.gene61204.t1 MTR_6g033910 27.404 208 99 3 68 273 21 178 1.35e-17 82.0
MS.gene61204.t1 MTR_7g026050 29.412 170 117 3 238 404 1 170 2.19e-16 82.0
MS.gene61204.t1 MTR_4g115780 22.930 471 297 16 4 438 141 581 2.94e-16 84.0
MS.gene61204.t1 MTR_5g090110 21.366 454 301 12 4 438 29 445 1.90e-13 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61204.t1 AT1G79930 75.352 852 180 4 1 850 1 824 0.0 1324
MS.gene61204.t1 AT1G79930 79.385 781 156 2 1 779 1 778 0.0 1295
MS.gene61204.t1 AT1G79920 80.310 645 122 2 1 643 1 642 0.0 1082
MS.gene61204.t1 AT1G79920 80.155 645 123 2 1 643 1 642 0.0 1061
MS.gene61204.t1 AT1G79920 80.155 645 123 2 1 643 1 642 0.0 1061
MS.gene61204.t1 AT1G79920 80.155 645 123 2 1 643 1 642 0.0 1061
MS.gene61204.t1 AT1G11660 49.313 801 346 9 1 796 1 746 0.0 763
MS.gene61204.t1 AT1G11660 49.313 801 346 9 1 796 1 746 0.0 763
MS.gene61204.t1 AT1G11660 49.313 801 346 9 1 796 1 746 0.0 763
MS.gene61204.t1 AT1G11660 47.906 764 338 9 38 796 1 709 0.0 699
MS.gene61204.t1 AT1G16030 33.404 473 296 6 4 471 9 467 2.34e-84 283
MS.gene61204.t1 AT5G02500 33.623 461 288 5 4 459 10 457 6.23e-84 282
MS.gene61204.t1 AT5G02500 36.675 379 238 2 4 381 10 387 2.82e-83 276
MS.gene61204.t1 AT3G12580 34.247 438 272 4 4 438 10 434 2.36e-82 278
MS.gene61204.t1 AT3G09440 33.546 471 294 6 4 469 10 466 4.06e-82 277
MS.gene61204.t1 AT3G09440 33.546 471 294 6 4 469 10 466 4.06e-82 277
MS.gene61204.t1 AT3G09440 33.546 471 294 6 4 469 10 466 4.06e-82 277
MS.gene61204.t1 AT3G09440 33.546 471 294 6 4 469 10 466 4.06e-82 277
MS.gene61204.t1 AT1G56410 34.913 401 257 3 4 401 10 409 6.14e-79 268
MS.gene61204.t1 AT5G02490 35.162 401 256 3 4 401 10 409 1.54e-78 268
MS.gene61204.t1 AT4G16660 26.188 863 570 23 2 823 25 861 1.71e-77 270
MS.gene61204.t1 AT4G16660 26.188 863 570 23 2 823 49 885 2.51e-77 270
MS.gene61204.t1 AT1G09080 32.829 463 289 6 2 459 41 486 1.13e-75 260
MS.gene61204.t1 AT1G09080 32.829 463 289 6 2 459 51 496 2.08e-75 259
MS.gene61204.t1 AT5G42020 31.681 464 294 7 2 459 36 482 1.03e-74 258
MS.gene61204.t1 AT5G42020 31.681 464 294 7 2 459 36 482 1.40e-74 256
MS.gene61204.t1 AT5G42020 31.681 464 294 7 2 459 41 487 2.34e-74 257
MS.gene61204.t1 AT5G28540 31.681 464 294 7 2 459 36 482 4.46e-74 256
MS.gene61204.t1 AT5G09590 33.168 404 253 7 3 401 59 450 4.72e-64 228
MS.gene61204.t1 AT4G37910 32.637 383 243 4 3 380 54 426 8.25e-62 222
MS.gene61204.t1 AT4G37910 32.637 383 243 4 3 380 54 426 8.25e-62 222
MS.gene61204.t1 AT5G49910 29.038 520 335 11 3 511 80 576 4.30e-55 203
MS.gene61204.t1 AT4G24280 30.926 443 274 9 3 438 80 497 1.56e-53 199
MS.gene61204.t1 AT2G32120 24.336 452 299 12 4 441 31 453 2.55e-19 93.2
MS.gene61204.t1 AT2G32120 24.336 452 299 12 4 441 31 453 2.55e-19 93.2

Find 207 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGAGTTGTTGGTGTTTC+TGG 0.041222 2.1:-3280976 None:intergenic
CTGGAACTCTCGTACTTTAA+AGG 0.133668 2.1:-3277982 None:intergenic
TCTGAACATCGAGTGCTTAA+TGG 0.188081 2.1:+3277680 MS.gene61204:CDS
CTTATATTCCTCCTTAAATT+TGG 0.191974 2.1:-3277565 None:intergenic
AGGACGGGGTTGGCAAATTT+TGG 0.198115 2.1:-3280741 None:intergenic
GGTGACAAACAACGGTTTAT+TGG 0.201798 2.1:+3276958 MS.gene61204:CDS
TCCTCCTGAGGTTGCTGTTC+TGG 0.221365 2.1:-3281027 None:intergenic
ATTGATTCATGCACGATATC+TGG 0.221555 2.1:+3277131 MS.gene61204:CDS
TTGCATTGCCGGATTTAAAA+AGG 0.228004 2.1:+3277458 MS.gene61204:CDS
AATGTCAATGTGATCAAATT+TGG 0.239845 2.1:-3280554 None:intergenic
GGCTTGGCCGGCTTCGGTTT+TGG 0.248203 2.1:-3280946 None:intergenic
CCTGTTGCAGAGGTAGTTTA+TGG 0.277865 2.1:+3279822 MS.gene61204:CDS
TTCACAGCTACTCAAGTCTT+TGG 0.281593 2.1:+3277168 MS.gene61204:CDS
ACAGCAACTGCCTTGGCTTA+TGG 0.283051 2.1:+3277357 MS.gene61204:CDS
AAAGTTCGTTTGAATCTTCA+TGG 0.286356 2.1:+3279031 MS.gene61204:CDS
CAAATTTAAGGAGGAATATA+AGG 0.287935 2.1:+3277566 MS.gene61204:CDS
AGCATGCAAGTTTGCATTGC+CGG 0.294577 2.1:+3277447 MS.gene61204:CDS
TCTCTTTCGTGGAAATCTTC+TGG 0.295965 2.1:+3278709 MS.gene61204:CDS
GTGACAAACAACGGTTTATT+GGG 0.297139 2.1:+3276959 MS.gene61204:CDS
TTCAAATCCCTCTGCAGTTC+CGG 0.301759 2.1:-3277066 None:intergenic
GGTCCTTCAGTGACATTAAA+AGG 0.302527 2.1:-3277096 None:intergenic
TCAGCAGATTCTTTGGTAAC+TGG 0.303908 2.1:-3279256 None:intergenic
TTTCGTCATGATCGGCTTAC+AGG 0.313727 2.1:-3280923 None:intergenic
TCAGACAAGCCCTGGCATTC+TGG 0.315813 2.1:-3277599 None:intergenic
ATTGACAGAGTTCTTCAAAA+AGG 0.324222 2.1:+3277884 MS.gene61204:CDS
TGAATTTATTACCAAACTTC+AGG 0.326359 2.1:+3280101 MS.gene61204:CDS
GATACCCCTGGGGCTGAAAA+TGG 0.326543 2.1:+3279385 MS.gene61204:CDS
CATATTAACATCGTTGTCAT+TGG 0.332496 2.1:-3279341 None:intergenic
TGTCTATGACATGAGAAATA+AGG 0.332501 2.1:+3279956 MS.gene61204:CDS
GCAACTATCTCTTCCAATCT+TGG 0.333522 2.1:+3277746 MS.gene61204:CDS
ATCTTCCACCTCCTGAAGTT+TGG 0.336106 2.1:-3280112 None:intergenic
CTTGGCATTGTATACACCTT+TGG 0.340971 2.1:-3280163 None:intergenic
CCAGGGCTTGTCTGAGGTTG+AGG 0.342271 2.1:+3277607 MS.gene61204:CDS
GTAGCTGGCTTGGCCGGCTT+CGG 0.350876 2.1:-3280952 None:intergenic
TTGGATGCAGCCACTATTGC+AGG 0.354110 2.1:+3277303 MS.gene61204:CDS
ACCGATTACCTTCTGTTTCT+CGG 0.363019 2.1:-3280578 None:intergenic
CTTTAAAGTACGAGAGTTCC+AGG 0.363318 2.1:+3277983 MS.gene61204:CDS
CCCTTCACACGCTCCAAGAT+TGG 0.367345 2.1:-3277759 None:intergenic
TCTTTATAGCGCTCTTCAAT+TGG 0.369111 2.1:-3280451 None:intergenic
CAACGGTTTATTGGGACTGC+TGG 0.381438 2.1:+3276967 MS.gene61204:CDS
TCACCAAAACACACAATTGC+TGG 0.381576 2.1:-3276940 None:intergenic
ATGTCAATGTGATCAAATTT+GGG 0.382316 2.1:-3280553 None:intergenic
TAGGTATGGGATTTCCCTTT+GGG 0.397756 2.1:-3278783 None:intergenic
CTAGGTATGGGATTTCCCTT+TGG 0.399508 2.1:-3278784 None:intergenic
AATTTATAAGACTGATCTTC+CGG 0.400012 2.1:+3277380 MS.gene61204:CDS
ATGGTTGAGGTGGTTGGTTC+CGG 0.401837 2.1:+3277834 MS.gene61204:CDS
GTTGGTGTTTCTGGAGTAGC+TGG 0.401844 2.1:-3280967 None:intergenic
CAATACCTTGGAACTAGGTA+TGG 0.403161 2.1:-3278797 None:intergenic
TCTGATTTGTCAGTCTCCAT+TGG 0.404976 2.1:-3281117 None:intergenic
GCTGTTGTTGATTGCTGCAT+TGG 0.405028 2.1:+3277240 MS.gene61204:CDS
TTATTGTCTGATTCGCTGTC+TGG 0.407773 2.1:-3278742 None:intergenic
TCCTGAGGAGGTGGAGTTGT+TGG 0.408657 2.1:-3280985 None:intergenic
TAAATTTGGCAGCAAAATGA+TGG 0.412474 2.1:-3277551 None:intergenic
TCACAGCTACTCAAGTCTTT+GGG 0.416881 2.1:+3277169 MS.gene61204:CDS
CCATTCGTACGATAGGTCCC+TGG 0.429701 2.1:+3277500 MS.gene61204:CDS
ACTCCAGCAATTGTGTGTTT+TGG 0.432697 2.1:+3276937 MS.gene61204:CDS
GGTGGTGCAGCAGCATCAGC+AGG 0.435571 2.1:-3279310 None:intergenic
TCTTCAGAGGAGAGCTGTAT+TGG 0.435740 2.1:+3277284 MS.gene61204:CDS
AACGGTTTATTGGGACTGCT+GGG 0.440788 2.1:+3276968 MS.gene61204:CDS
TCGATGTTCAGAGGTGCCTC+TGG 0.441984 2.1:-3277669 None:intergenic
GATAGCTGGTACACGAGAAC+CGG 0.449422 2.1:-3277853 None:intergenic
GGAGCGTGTGAAGGGACCTT+TGG 0.450308 2.1:+3277767 MS.gene61204:CDS
AATCAAGTCCCACCAGTCTC+TGG 0.450550 2.1:+3281090 MS.gene61204:CDS
CAGGGCTTGTCTGAGGTTGA+GGG 0.453127 2.1:+3277608 MS.gene61204:CDS
TCCATTGGTTCGCCAGAGAC+TGG 0.454103 2.1:-3281102 None:intergenic
GTATTGACATTCTTCAGAAC+AGG 0.459419 2.1:+3278814 MS.gene61204:CDS
CAAGCTGGAAGAGCTCAAAA+AGG 0.461479 2.1:+3280182 MS.gene61204:CDS
TGCTGAAGAAAATGCTAAGA+TGG 0.464324 2.1:+3279273 MS.gene61204:CDS
TCCAATCTTGGAGCGTGTGA+AGG 0.464412 2.1:+3277758 MS.gene61204:CDS
AATGTTGCCTTCGTTGATGT+TGG 0.464859 2.1:+3277417 MS.gene61204:CDS
ACCAACAACTCCACCTCCTC+AGG 0.467608 2.1:+3280984 MS.gene61204:CDS
CCATAAACTACCTCTGCAAC+AGG 0.467626 2.1:-3279822 None:intergenic
ATGTTGCCTTCGTTGATGTT+GGG 0.468175 2.1:+3277418 MS.gene61204:CDS
TTGATGTTTACCAGAATGCC+AGG 0.468308 2.1:+3277589 MS.gene61204:CDS
AACTTCAGGAGGTGGAAGAT+TGG 0.469887 2.1:+3280115 MS.gene61204:CDS
TCGCAGATAAAGAGATTGAT+TGG 0.470501 2.1:+3277027 MS.gene61204:CDS
AGGAGATAAGCCTGTGCAAA+TGG 0.471804 2.1:+3279420 MS.gene61204:CDS
TGCTCACCTTCCTGAGGAGG+TGG 0.475053 2.1:-3280994 None:intergenic
ACACTGCAATGCAGCACCCC+TGG 0.479004 2.1:-3277943 None:intergenic
CACGAAAGAGAAACTGAAAA+GGG 0.481256 2.1:-3278697 None:intergenic
CCACGAAAGAGAAACTGAAA+AGG 0.483023 2.1:-3278698 None:intergenic
CTGATCTTCCGGAAAATGAA+TGG 0.484443 2.1:+3277391 MS.gene61204:CDS
TGAAGATCGGTAAAGTAGAC+TGG 0.487938 2.1:-3277267 None:intergenic
CGAGACAACAGCAACTGCCT+TGG 0.492233 2.1:+3277350 MS.gene61204:CDS
ACGATAGGTCCCTGGGTGGT+AGG 0.492416 2.1:+3277508 MS.gene61204:CDS
CCCTGCATTGTCATTACTAC+CGG 0.496598 2.1:-3281058 None:intergenic
GTATCTGTATCCATTTGCAC+AGG 0.502980 2.1:-3279430 None:intergenic
TCTGGAGTAGCTGGCTTGGC+CGG 0.504054 2.1:-3280958 None:intergenic
TTGATTCATGCACGATATCT+GGG 0.504774 2.1:+3277132 MS.gene61204:CDS
AATGTGTAGAAGCTGAGAAT+TGG 0.505212 2.1:+3280685 MS.gene61204:CDS
ACCAGTCTCTGGCGAACCAA+TGG 0.505944 2.1:+3281101 MS.gene61204:CDS
GAAAATGGCATGCCTGAGGC+AGG 0.507943 2.1:+3279400 MS.gene61204:CDS
CTGAAGCAACGACAAACTCT+TGG 0.510316 2.1:-3280071 None:intergenic
TCTGCAAGTGCCTTCTCCAA+AGG 0.510923 2.1:-3277783 None:intergenic
CGATAGGTCCCTGGGTGGTA+GGG 0.511133 2.1:+3277509 MS.gene61204:CDS
ATCCACATGGTTGAGGTGGT+TGG 0.513899 2.1:+3277828 MS.gene61204:CDS
GAGAAGGCACTTGCAGAAGC+AGG 0.514343 2.1:+3277789 MS.gene61204:CDS
GACGAAACCAAAACCGAAGC+CGG 0.516011 2.1:+3280939 MS.gene61204:CDS
TGTTTCTGGAGTAGCTGGCT+TGG 0.519497 2.1:-3280962 None:intergenic
AACTCTCGTACTTTAAAGGT+TGG 0.520643 2.1:-3277978 None:intergenic
TGCTGATCCGGAACTGCAGA+GGG 0.522518 2.1:+3277059 MS.gene61204:CDS
TGTAGAGAAGGAGTTTGAAA+TGG 0.522603 2.1:+3279875 MS.gene61204:CDS
ATATCAGCTGACAAGAGGAC+GGG 0.523481 2.1:-3280756 None:intergenic
AAGGTAACTGCTGATACCCC+TGG 0.526128 2.1:+3279373 MS.gene61204:CDS
GCTATAAAGAGTACTCAGAC+AGG 0.526304 2.1:+3280464 MS.gene61204:CDS
AGGTGTATACAATGCCAAGC+TGG 0.526816 2.1:+3280167 MS.gene61204:CDS
AGATATCGTGCATGAATCAA+TGG 0.527139 2.1:-3277129 None:intergenic
ACAGGCTTATCTCCTGCCTC+AGG 0.527960 2.1:-3279412 None:intergenic
GCTGCATTGTTGCCGTTGCA+AGG 0.528572 2.1:+3276869 MS.gene61204:CDS
CCTCAACCTCAGACAAGCCC+TGG 0.529406 2.1:-3277607 None:intergenic
TGAATCAATGGATATCCATC+AGG 0.529513 2.1:-3277117 None:intergenic
ACAACCAGAACAGCAACCTC+AGG 0.530164 2.1:+3281023 MS.gene61204:CDS
TATTACCAAACTTCAGGAGG+TGG 0.534898 2.1:+3280107 MS.gene61204:CDS
TTGCCGTTGCAAGGCAGAGA+GGG 0.535504 2.1:+3276878 MS.gene61204:CDS
CAGGGACCTATCGTACGAAT+GGG 0.536830 2.1:-3277499 None:intergenic
GCCGGTAGTAATGACAATGC+AGG 0.537493 2.1:+3281057 MS.gene61204:CDS
TGAGAATATCCACATGGTTG+AGG 0.538524 2.1:+3277821 MS.gene61204:CDS
TTCTTATATCAGCTGACAAG+AGG 0.539505 2.1:-3280761 None:intergenic
ACTTGCAGAAGCAGGTCTTA+CGG 0.542448 2.1:+3277797 MS.gene61204:CDS
ATGCTAGCGAGTGTGTTGCC+AGG 0.542997 2.1:+3277925 MS.gene61204:CDS
TGCTGCTCACCTTCCTGAGG+AGG 0.545333 2.1:-3280997 None:intergenic
AATGTCAATACCTTGGAACT+AGG 0.546679 2.1:-3278802 None:intergenic
TGTTCAGAAGGCTGTAGAGA+AGG 0.546797 2.1:+3279863 MS.gene61204:CDS
ACATCGTTGTCATTGGAGCT+AGG 0.547123 2.1:-3279334 None:intergenic
TGTTAATATGCAAGATGCTA+AGG 0.547914 2.1:+3279354 MS.gene61204:CDS
TTGTCATTGGAGCTAGGAGG+TGG 0.548536 2.1:-3279328 None:intergenic
TGCTAGCGAGTGTGTTGCCA+GGG 0.549345 2.1:+3277926 MS.gene61204:CDS
CCAGGGACCTATCGTACGAA+TGG 0.550358 2.1:-3277500 None:intergenic
ACATTGTACATCAACAGAAA+AGG 0.552110 2.1:-3278839 None:intergenic
CGGGTGCAAACCTGCAATAG+TGG 0.553198 2.1:-3277313 None:intergenic
TGCTTGTGAGAAGCTGAAGA+AGG 0.553233 2.1:+3277632 MS.gene61204:CDS
CCGGTAGTAATGACAATGCA+GGG 0.554344 2.1:+3281058 MS.gene61204:CDS
TACCTCTGCAACAGGAATGT+TGG 0.554739 2.1:-3279814 None:intergenic
CGAGTGCTTAATGGATGAGA+AGG 0.556611 2.1:+3277689 MS.gene61204:CDS
AATTGCTGGAGTTTCACGCT+TGG 0.556631 2.1:-3276926 None:intergenic
GTCAAAATCCCTACCACCCA+GGG 0.558316 2.1:-3277517 None:intergenic
ATTGGTTCGCCAGAGACTGG+TGG 0.559164 2.1:-3281099 None:intergenic
CATTCGTACGATAGGTCCCT+GGG 0.559216 2.1:+3277501 MS.gene61204:CDS
CCAATCTTGGAGCGTGTGAA+GGG 0.559917 2.1:+3277759 MS.gene61204:CDS
AGGTAACTGCTGATACCCCT+GGG 0.561414 2.1:+3279374 MS.gene61204:CDS
TACAGCTCTCCTCTGAAGAT+CGG 0.567203 2.1:-3277280 None:intergenic
TCTCGTGAATCAAGTGAAGC+GGG 0.567955 2.1:-3277332 None:intergenic
AATGTCACTGAAGGACCTGA+TGG 0.568196 2.1:+3277102 MS.gene61204:CDS
TCTGAAGAATGTCAATACCT+TGG 0.568276 2.1:-3278809 None:intergenic
AATGGATGAGAAGGATGTGA+GGG 0.568291 2.1:+3277698 MS.gene61204:CDS
TGGAATTGTGTCTGTTGAGT+CGG 0.568343 2.1:+3279051 MS.gene61204:CDS
AGCTGACAAGAGGACGGGGT+TGG 0.571644 2.1:-3280751 None:intergenic
GTTTGTCGTTGCTTCAGAGA+GGG 0.575619 2.1:+3280077 MS.gene61204:CDS
CGTCAAAATCCCTACCACCC+AGG 0.577960 2.1:-3277518 None:intergenic
CTAGCATTCATAGTCCGCCT+AGG 0.579676 2.1:-3277909 None:intergenic
TGCTGCTGCTCACCTTCCTG+AGG 0.582832 2.1:-3281000 None:intergenic
AATGACAATGCAGGGGACAA+TGG 0.583306 2.1:+3281066 MS.gene61204:CDS
AGAGGTAGTTTATGGTGCAA+TGG 0.587607 2.1:+3279830 MS.gene61204:CDS
CCTCAGGAGGATGCTAATGC+CGG 0.588845 2.1:+3281039 MS.gene61204:CDS
CTTATAAATTCCATAAGCCA+AGG 0.590353 2.1:-3277367 None:intergenic
TACTGTCCCATTCGTACGAT+AGG 0.595664 2.1:+3277493 MS.gene61204:CDS
AATACCTTGGAACTAGGTAT+GGG 0.596855 2.1:-3278796 None:intergenic
AAATCCCATACCTAGTTCCA+AGG 0.597545 2.1:+3278792 MS.gene61204:CDS
TATAAAGAGTACTCAGACAG+GGG 0.597749 2.1:+3280466 MS.gene61204:CDS
CTATAAAGAGTACTCAGACA+GGG 0.603983 2.1:+3280465 MS.gene61204:CDS
TTGGTTCGCCAGAGACTGGT+GGG 0.606360 2.1:-3281098 None:intergenic
ATGGATGAGAAGGATGTGAG+GGG 0.606368 2.1:+3277699 MS.gene61204:CDS
TTGCTGATCCGGAACTGCAG+AGG 0.608780 2.1:+3277058 MS.gene61204:CDS
ACGGTTTATTGGGACTGCTG+GGG 0.609490 2.1:+3276969 MS.gene61204:CDS
TATATCAGCTGACAAGAGGA+CGG 0.612018 2.1:-3280757 None:intergenic
GGCTCTGCAAGATCGAGTGA+TGG 0.612553 2.1:+3279896 MS.gene61204:CDS
CAACCAAAGATGAGTGTGGT+CGG 0.612927 2.1:+3276826 None:intergenic
GACCAACATTCCTGTTGCAG+AGG 0.615018 2.1:+3279812 MS.gene61204:CDS
TGTGAAGGGACCTTTGGAGA+AGG 0.615609 2.1:+3277773 MS.gene61204:CDS
TCTACTTTACCGATCTTCAG+AGG 0.615790 2.1:+3277271 MS.gene61204:CDS
ATTTATTACCAAACTTCAGG+AGG 0.618570 2.1:+3280104 MS.gene61204:CDS
TCTGCAAGATCGAGTGATGG+AGG 0.622778 2.1:+3279899 MS.gene61204:CDS
GGCAACTGTTGATGTTCAGA+AGG 0.624402 2.1:+3279851 MS.gene61204:CDS
ATTTCCCTTTGGGAAAACAA+TGG 0.628075 2.1:-3278773 None:intergenic
ACCAGAACAGCAACCTCAGG+AGG 0.628863 2.1:+3281026 MS.gene61204:CDS
CTTTGAAGAGGAAGAAACTG+AGG 0.629490 2.1:+3279231 MS.gene61204:CDS
GAAGATTGGCTATACGAGGA+TGG 0.629632 2.1:+3280129 MS.gene61204:CDS
GTCTCGTGAATCAAGTGAAG+CGG 0.632195 2.1:-3277333 None:intergenic
ATTAAGCACTCGATGTTCAG+AGG 0.634047 2.1:-3277678 None:intergenic
AGAATGCCAGGGCTTGTCTG+AGG 0.639873 2.1:+3277601 MS.gene61204:CDS
ACAACTCCACCTCCTCAGGA+AGG 0.644838 2.1:+3280988 MS.gene61204:CDS
GGCTGAAAATGGCATGCCTG+AGG 0.650058 2.1:+3279396 MS.gene61204:CDS
AATCCCTCTCTGCCTTGCAA+CGG 0.651598 2.1:-3276881 None:intergenic
AACCAACCACCTCAACCATG+TGG 0.653097 2.1:-3277830 None:intergenic
TATCAGCTGACAAGAGGACG+GGG 0.657591 2.1:-3280755 None:intergenic
TGACATTGCCGAGAAACAGA+AGG 0.657830 2.1:+3280570 MS.gene61204:CDS
AGCATGCCCAACATCAACGA+AGG 0.660529 2.1:-3277424 None:intergenic
GTTGCCGTTGCAAGGCAGAG+AGG 0.665250 2.1:+3276877 MS.gene61204:CDS
TGATGTTTACCAGAATGCCA+GGG 0.666077 2.1:+3277590 MS.gene61204:CDS
TAATGGATGAGAAGGATGTG+AGG 0.670561 2.1:+3277697 MS.gene61204:CDS
AGTTTGTCGTTGCTTCAGAG+AGG 0.671949 2.1:+3280076 MS.gene61204:CDS
ACGAAAGAGAAACTGAAAAG+GGG 0.674521 2.1:-3278696 None:intergenic
GAATATCCACATGGTTGAGG+TGG 0.679068 2.1:+3277824 MS.gene61204:CDS
GCAAATGGATACAGATACCA+AGG 0.680089 2.1:+3279435 MS.gene61204:CDS
CCGGCATTAGCATCCTCCTG+AGG 0.684481 2.1:-3281039 None:intergenic
TACGGTTGAGAATATCCACA+TGG 0.684683 2.1:+3277815 MS.gene61204:CDS
GTGCCTCTGGATTTGCACTG+AGG 0.688247 2.1:-3277656 None:intergenic
TCGTTGTCATTGGAGCTAGG+AGG 0.689793 2.1:-3279331 None:intergenic
CGGTAGTAATGACAATGCAG+GGG 0.692208 2.1:+3281059 MS.gene61204:CDS
GGTCCTCAGTGCAAATCCAG+AGG 0.694749 2.1:+3277653 MS.gene61204:CDS
GGTGGAAGATTGGCTATACG+AGG 0.701809 2.1:+3280125 MS.gene61204:CDS
GATGGTGAAGACGAAACCAA+AGG 0.702732 2.1:+3280147 MS.gene61204:CDS
AGATCAACCAAAGATGAGTG+TGG 0.702981 2.1:+3276822 None:intergenic
ACTGACAAATCAGAGAACAC+AGG 0.711435 2.1:+3281126 MS.gene61204:CDS
GCTAGCGAGTGTGTTGCCAG+GGG 0.718198 2.1:+3277927 MS.gene61204:CDS
TCGTACGATAGGTCCCTGGG+TGG 0.718316 2.1:+3277504 MS.gene61204:CDS
GGTAACTGCTGATACCCCTG+GGG 0.770509 2.1:+3279375 MS.gene61204:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTTTTTTTT+GGG + chr2.1:3278065-3278084 MS.gene61204:intron 0.0%
!!! TATTTTTTTTTTTTTTTTTT+TGG + chr2.1:3278064-3278083 MS.gene61204:intron 0.0%
!! TTAAAGAAAAAATAATACTA+CGG - chr2.1:3278315-3278334 None:intergenic 10.0%
!!! GTTTTCTATTTAAATTTTTT+AGG + chr2.1:3280653-3280672 MS.gene61204:intron 10.0%
!!! TTTTTTTTTTTTTTTTTTGG+GGG + chr2.1:3278067-3278086 MS.gene61204:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2.1:3278085-3278104 MS.gene61204:intron 100.0%
!! TCAATTTGTAAATATAACAA+GGG - chr2.1:3278573-3278592 None:intergenic 15.0%
!! TGTATATAGTATTAATTGAA+GGG - chr2.1:3278285-3278304 None:intergenic 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG - chr2.1:3278211-3278230 None:intergenic 15.0%
!!! TAATTTTCTTATTTCTATTG+TGG + chr2.1:3279568-3279587 MS.gene61204:intron 15.0%
!!! TTTTTTAATAATTGTAGCAA+GGG + chr2.1:3280425-3280444 MS.gene61204:intron 15.0%
!!! TTTTTTTAATAATTGTAGCA+AGG + chr2.1:3280424-3280443 MS.gene61204:intron 15.0%
!!! TTTTTTTTTTTTTTTTTGGG+GGG + chr2.1:3278068-3278087 MS.gene61204:intron 15.0%
!! AAATTATCCTAATCAACTAT+TGG - chr2.1:3278349-3278368 None:intergenic 20.0%
!! AATAGTTGATTAGGATAATT+TGG + chr2.1:3278348-3278367 MS.gene61204:intron 20.0%
!! CTAATTATGTTATCTACAAT+AGG + chr2.1:3280899-3280918 MS.gene61204:intron 20.0%
!! GTCAATTTGTAAATATAACA+AGG - chr2.1:3278574-3278593 None:intergenic 20.0%
!! GTGTATATAGTATTAATTGA+AGG - chr2.1:3278286-3278305 None:intergenic 20.0%
!! TACAAATAGAAATATTGCAT+TGG - chr2.1:3278511-3278530 None:intergenic 20.0%
!!! TTTACAATATTTTTCCCTAT+TGG + chr2.1:3278932-3278951 MS.gene61204:intron 20.0%
!!! TTTTCAGACAAACTTATATT+TGG + chr2.1:3279617-3279636 MS.gene61204:intron 20.0%
!!! TTTTTAATAATTGTAGCAAG+GGG + chr2.1:3280426-3280445 MS.gene61204:intron 20.0%
!!! TTTTTCTTGTTTCTTTCAAA+TGG + chr2.1:3279994-3280013 MS.gene61204:intron 20.0%
!!! TTTTTTTTTTTTTTTTGGGG+GGG + chr2.1:3278069-3278088 MS.gene61204:intron 20.0%
! AAACAAACCAATAGTTGATT+AGG + chr2.1:3278339-3278358 MS.gene61204:intron 25.0%
! AATGTCAATGTGATCAAATT+TGG - chr2.1:3280557-3280576 None:intergenic 25.0%
! AATTTATAAGACTGATCTTC+CGG + chr2.1:3277380-3277399 MS.gene61204:CDS 25.0%
! AGAAATATTGCATTGGAAAA+TGG - chr2.1:3278504-3278523 None:intergenic 25.0%
! ATGTCAATGTGATCAAATTT+GGG - chr2.1:3280556-3280575 None:intergenic 25.0%
! CAAATTTAAGGAGGAATATA+AGG + chr2.1:3277566-3277585 MS.gene61204:CDS 25.0%
! CTTATATTCCTCCTTAAATT+TGG - chr2.1:3277568-3277587 None:intergenic 25.0%
! GTGATTTATAAAGTTCTTGT+TGG + chr2.1:3279686-3279705 MS.gene61204:intron 25.0%
! TAACACTTCTAATTCATTTC+TGG + chr2.1:3280610-3280629 MS.gene61204:intron 25.0%
! TGAATTTATTACCAAACTTC+AGG + chr2.1:3280101-3280120 MS.gene61204:CDS 25.0%
! TGATATAAGAAAAAAAGCTG+AGG + chr2.1:3280773-3280792 MS.gene61204:CDS 25.0%
! TTGTTTACTTCATTATGAGA+AGG + chr2.1:3278660-3278679 MS.gene61204:intron 25.0%
!! AACACTTTTCAAAATGACTA+GGG + chr2.1:3280299-3280318 MS.gene61204:intron 25.0%
!! TTCAAAATGAATGTCGTTTA+AGG - chr2.1:3278430-3278449 None:intergenic 25.0%
!!! AAACGACACTCATTTTAAAA+CGG - chr2.1:3278185-3278204 None:intergenic 25.0%
!!! AAACGACATTCATTTTGAAA+CGG + chr2.1:3278431-3278450 MS.gene61204:intron 25.0%
!!! TACAAATTGACCATTTTTTG+CGG + chr2.1:3278583-3278602 MS.gene61204:intron 25.0%
!!! TGAATTAGAAGTGTTAGTAT+TGG - chr2.1:3280606-3280625 None:intergenic 25.0%
!!! TTTCTTATTTCTATTGTGGA+AGG + chr2.1:3279572-3279591 MS.gene61204:intron 25.0%
!!! TTTTTTTTTTTTTTTGGGGG+GGG + chr2.1:3278070-3278089 MS.gene61204:intron 25.0%
AAAGTTCGTTTGAATCTTCA+TGG + chr2.1:3279031-3279050 MS.gene61204:CDS 30.0%
ACATTGTACATCAACAGAAA+AGG - chr2.1:3278842-3278861 None:intergenic 30.0%
AGGTATATGTTGTACCTTTA+TGG + chr2.1:3280804-3280823 MS.gene61204:intron 30.0%
ATGACATGAGAAATAAGGTT+AGG + chr2.1:3279961-3279980 MS.gene61204:intron 30.0%
ATTGACAGAGTTCTTCAAAA+AGG + chr2.1:3277884-3277903 MS.gene61204:CDS 30.0%
ATTTATTACCAAACTTCAGG+AGG + chr2.1:3280104-3280123 MS.gene61204:CDS 30.0%
CATATTAACATCGTTGTCAT+TGG - chr2.1:3279344-3279363 None:intergenic 30.0%
CTTATAAATTCCATAAGCCA+AGG - chr2.1:3277370-3277389 None:intergenic 30.0%
TAAATTTGGCAGCAAAATGA+TGG - chr2.1:3277554-3277573 None:intergenic 30.0%
TACAGCATAGAAAATTTACC+TGG - chr2.1:3278004-3278023 None:intergenic 30.0%
TCTTCTTAACCAATGTCATA+AGG + chr2.1:3278531-3278550 MS.gene61204:intron 30.0%
TGCAAAAACTATAACTACAG+TGG - chr2.1:3280383-3280402 None:intergenic 30.0%
TGTCTATGACATGAGAAATA+AGG + chr2.1:3279956-3279975 MS.gene61204:CDS 30.0%
TGTTAATATGCAAGATGCTA+AGG + chr2.1:3279354-3279373 MS.gene61204:CDS 30.0%
TTACCACAATGATTTCACAT+GGG - chr2.1:3279152-3279171 None:intergenic 30.0%
TTTACCACAATGATTTCACA+TGG - chr2.1:3279153-3279172 None:intergenic 30.0%
! ACACTTTTCAAAATGACTAG+GGG + chr2.1:3280300-3280319 MS.gene61204:intron 30.0%
! ACCAGTATGTTCTGTATTTT+TGG + chr2.1:3278030-3278049 MS.gene61204:intron 30.0%
! ATCTGCGAGATTGAATTTTT+CGG - chr2.1:3277015-3277034 None:intergenic 30.0%
! ATTTTCTTCAGCAGATTCTT+TGG - chr2.1:3279266-3279285 None:intergenic 30.0%
! CAACACTTTTCAAAATGACT+AGG + chr2.1:3280298-3280317 MS.gene61204:intron 30.0%
! TAAACGAAAGTATGTATGCA+TGG - chr2.1:3280328-3280347 None:intergenic 30.0%
! TCATTTTGCTGCCAAATTTA+AGG + chr2.1:3277554-3277573 MS.gene61204:CDS 30.0%
!! AAAGTGTTGATAGCTATCAA+AGG - chr2.1:3280287-3280306 None:intergenic 30.0%
!! TGGTAAAAAATTTGCTGATC+CGG + chr2.1:3277047-3277066 MS.gene61204:CDS 30.0%
!! TTTTGTTAAGCTCTTTGAAG+AGG + chr2.1:3279219-3279238 MS.gene61204:intron 30.0%
!!! GTCAATATTTTGTTGATAGC+TGG - chr2.1:3277870-3277889 None:intergenic 30.0%
!!! GTCTTCTTCACTTTTTTCTT+TGG - chr2.1:3279795-3279814 None:intergenic 30.0%
!!! TTTTTTTTTTTTTTGGGGGG+GGG + chr2.1:3278071-3278090 MS.gene61204:intron 30.0%
AATACCTTGGAACTAGGTAT+GGG - chr2.1:3278799-3278818 None:intergenic 35.0%
AATGTCAATACCTTGGAACT+AGG - chr2.1:3278805-3278824 None:intergenic 35.0%
AATGTGTAGAAGCTGAGAAT+TGG + chr2.1:3280685-3280704 MS.gene61204:CDS 35.0%
ACGAAAGAGAAACTGAAAAG+GGG - chr2.1:3278699-3278718 None:intergenic 35.0%
AGACAAGAAAAATGCAGTTG+AGG + chr2.1:3279929-3279948 MS.gene61204:CDS 35.0%
AGATATCGTGCATGAATCAA+TGG - chr2.1:3277132-3277151 None:intergenic 35.0%
AGCTCAGAAAAATCTGAATG+CGG + chr2.1:3277218-3277237 MS.gene61204:CDS 35.0%
AGTTCTTCAAAAAGGAACCT+AGG + chr2.1:3277892-3277911 MS.gene61204:CDS 35.0%
ATGGGCGTAATTAGAAAAGA+AGG - chr2.1:3279134-3279153 None:intergenic 35.0%
CAAACTAAAAACGGTGACAA+GGG + chr2.1:3278995-3279014 MS.gene61204:CDS 35.0%
CAATTCAATAACAAACGCTC+TGG - chr2.1:3279178-3279197 None:intergenic 35.0%
CACGAAAGAGAAACTGAAAA+GGG - chr2.1:3278700-3278719 None:intergenic 35.0%
CTGGTATAAAAAAGTCTCGA+TGG + chr2.1:3280240-3280259 MS.gene61204:intron 35.0%
GCCAAAAATACAGAACATAC+TGG - chr2.1:3278034-3278053 None:intergenic 35.0%
GTATAAAAAAGTCTCGATGG+TGG + chr2.1:3280243-3280262 MS.gene61204:intron 35.0%
GTGACAAACAACGGTTTATT+GGG + chr2.1:3276959-3276978 MS.gene61204:CDS 35.0%
GTGTAACAAGCAATATGTGA+AGG + chr2.1:3280356-3280375 MS.gene61204:intron 35.0%
TATTTGAGCACACATTGAAG+TGG - chr2.1:3279509-3279528 None:intergenic 35.0%
TCGCAGATAAAGAGATTGAT+TGG + chr2.1:3277027-3277046 MS.gene61204:CDS 35.0%
TCTGAAGAATGTCAATACCT+TGG - chr2.1:3278812-3278831 None:intergenic 35.0%
TCTTTATAGCGCTCTTCAAT+TGG - chr2.1:3280454-3280473 None:intergenic 35.0%
TGAATCAATGGATATCCATC+AGG - chr2.1:3277120-3277139 None:intergenic 35.0%
TGCATTGCCGGATTTAAAAA+GGG + chr2.1:3277459-3277478 MS.gene61204:CDS 35.0%
TGCTGAAGAAAATGCTAAGA+TGG + chr2.1:3279273-3279292 MS.gene61204:CDS 35.0%
TGTAGAGAAGGAGTTTGAAA+TGG + chr2.1:3279875-3279894 MS.gene61204:CDS 35.0%
TTATGCATCAATAAGCTCTC+TGG + chr2.1:3279712-3279731 MS.gene61204:intron 35.0%
TTCTTATATCAGCTGACAAG+AGG - chr2.1:3280764-3280783 None:intergenic 35.0%
TTGATTCATGCACGATATCT+GGG + chr2.1:3277132-3277151 MS.gene61204:CDS 35.0%
TTGCATTGCCGGATTTAAAA+AGG + chr2.1:3277458-3277477 MS.gene61204:CDS 35.0%
! AACTCTCGTACTTTAAAGGT+TGG - chr2.1:3277981-3278000 None:intergenic 35.0%
! AAGTACCATTGTTTTCCCAA+AGG + chr2.1:3278768-3278787 MS.gene61204:CDS 35.0%
! ACATTCAGCCATTCATTTTC+CGG - chr2.1:3277402-3277421 None:intergenic 35.0%
! AGTACCATTGTTTTCCCAAA+GGG + chr2.1:3278769-3278788 MS.gene61204:CDS 35.0%
! ATTGATTCATGCACGATATC+TGG + chr2.1:3277131-3277150 MS.gene61204:CDS 35.0%
! ATTTCCCTTTGGGAAAACAA+TGG - chr2.1:3278776-3278795 None:intergenic 35.0%
! GCACACAAAAATGTTTTCCT+TGG - chr2.1:3279467-3279486 None:intergenic 35.0%
! GTATTGACATTCTTCAGAAC+AGG + chr2.1:3278814-3278833 MS.gene61204:CDS 35.0%
! TTGCCTTTTAATGTCACTGA+AGG + chr2.1:3277093-3277112 MS.gene61204:CDS 35.0%
! TTTTGCTGCCAAATTTAAGG+AGG + chr2.1:3277557-3277576 MS.gene61204:CDS 35.0%
!! AAAGAGTGTCCTTATGACAT+TGG - chr2.1:3278543-3278562 None:intergenic 35.0%
!! CTATAAAGAGTACTCAGACA+GGG + chr2.1:3280465-3280484 MS.gene61204:CDS 35.0%
!! TATAAAGAGTACTCAGACAG+GGG + chr2.1:3280466-3280485 MS.gene61204:CDS 35.0%
!!! CACCGTTTTTAGTTTGGAAA+GGG - chr2.1:3278991-3279010 None:intergenic 35.0%
!!! GACACTCATTTTAAAACGGA+GGG - chr2.1:3278181-3278200 None:intergenic 35.0%
!!! GTATATGTGCTGATTTTCGT+AGG - chr2.1:3278883-3278902 None:intergenic 35.0%
!!! TCACCGTTTTTAGTTTGGAA+AGG - chr2.1:3278992-3279011 None:intergenic 35.0%
!!! TGTGTTTTGGTGACAAACAA+CGG + chr2.1:3276950-3276969 MS.gene61204:CDS 35.0%
!!! TTTTTTTTTTTTTGGGGGGG+GGG + chr2.1:3278072-3278091 MS.gene61204:intron 35.0%
AAATCCCATACCTAGTTCCA+AGG + chr2.1:3278792-3278811 MS.gene61204:CDS 40.0%
AATGGATGAGAAGGATGTGA+GGG + chr2.1:3277698-3277717 MS.gene61204:CDS 40.0%
AATGTTGCCTTCGTTGATGT+TGG + chr2.1:3277417-3277436 MS.gene61204:CDS 40.0%
ACTCTTGCATTTGTGCAGAT+TGG + chr2.1:3278965-3278984 MS.gene61204:intron 40.0%
ACTGACAAATCAGAGAACAC+AGG + chr2.1:3281126-3281145 MS.gene61204:CDS 40.0%
AGAGGTAGTTTATGGTGCAA+TGG + chr2.1:3279830-3279849 MS.gene61204:CDS 40.0%
AGAGTCAAAAGACTGCCAAT+AGG - chr2.1:3278950-3278969 None:intergenic 40.0%
AGATACCAAGGTACATTCCA+AGG + chr2.1:3279447-3279466 MS.gene61204:intron 40.0%
ATGCAACTCTCCGCAAAAAA+TGG - chr2.1:3278596-3278615 None:intergenic 40.0%
ATGTTGCCTTCGTTGATGTT+GGG + chr2.1:3277418-3277437 MS.gene61204:CDS 40.0%
ATTAAGCACTCGATGTTCAG+AGG - chr2.1:3277681-3277700 None:intergenic 40.0%
CAATACCTTGGAACTAGGTA+TGG - chr2.1:3278800-3278819 None:intergenic 40.0%
CCAAACTAAAAACGGTGACA+AGG + chr2.1:3278994-3279013 MS.gene61204:CDS 40.0%
CCACGAAAGAGAAACTGAAA+AGG - chr2.1:3278701-3278720 None:intergenic 40.0%
CTGATCTTCCGGAAAATGAA+TGG + chr2.1:3277391-3277410 MS.gene61204:CDS 40.0%
CTGGAACTCTCGTACTTTAA+AGG - chr2.1:3277985-3278004 None:intergenic 40.0%
CTTGGCATTGTATACACCTT+TGG - chr2.1:3280166-3280185 None:intergenic 40.0%
GAGTCAAAAGACTGCCAATA+GGG - chr2.1:3278949-3278968 None:intergenic 40.0%
GCAAATGGATACAGATACCA+AGG + chr2.1:3279435-3279454 MS.gene61204:CDS 40.0%
GCAACTATCTCTTCCAATCT+TGG + chr2.1:3277746-3277765 MS.gene61204:CDS 40.0%
GCATTGCCGGATTTAAAAAG+GGG + chr2.1:3277460-3277479 MS.gene61204:CDS 40.0%
GGCCCTTTCCAAACTAAAAA+CGG + chr2.1:3278986-3279005 MS.gene61204:CDS 40.0%
GGGGAGTTGTTAGTGTTATA+TGG + chr2.1:3278106-3278125 MS.gene61204:intron 40.0%
GGTCCTTCAGTGACATTAAA+AGG - chr2.1:3277099-3277118 None:intergenic 40.0%
GGTGACAAACAACGGTTTAT+TGG + chr2.1:3276958-3276977 MS.gene61204:CDS 40.0%
GTATCTGTATCCATTTGCAC+AGG - chr2.1:3279433-3279452 None:intergenic 40.0%
GTCTTTACTCTTAGCTGAAC+TGG + chr2.1:3280221-3280240 MS.gene61204:intron 40.0%
TAAAAACGGTGACAAGGGAA+AGG + chr2.1:3279000-3279019 MS.gene61204:CDS 40.0%
TACGGTTGAGAATATCCACA+TGG + chr2.1:3277815-3277834 MS.gene61204:CDS 40.0%
TAGGTATGGGATTTCCCTTT+GGG - chr2.1:3278786-3278805 None:intergenic 40.0%
TATATCAGCTGACAAGAGGA+CGG - chr2.1:3280760-3280779 None:intergenic 40.0%
TATTACCAAACTTCAGGAGG+TGG + chr2.1:3280107-3280126 MS.gene61204:CDS 40.0%
TCACAGCTACTCAAGTCTTT+GGG + chr2.1:3277169-3277188 MS.gene61204:CDS 40.0%
TCACCAAAACACACAATTGC+TGG - chr2.1:3276943-3276962 None:intergenic 40.0%
TCTACTTTACCGATCTTCAG+AGG + chr2.1:3277271-3277290 MS.gene61204:CDS 40.0%
TCTCTTTCGTGGAAATCTTC+TGG + chr2.1:3278709-3278728 MS.gene61204:CDS 40.0%
TCTGAACATCGAGTGCTTAA+TGG + chr2.1:3277680-3277699 MS.gene61204:CDS 40.0%
TCTTCAAAAAGGAACCTAGG+CGG + chr2.1:3277895-3277914 MS.gene61204:CDS 40.0%
TGAAGATCGGTAAAGTAGAC+TGG - chr2.1:3277270-3277289 None:intergenic 40.0%
TGAGAATATCCACATGGTTG+AGG + chr2.1:3277821-3277840 MS.gene61204:CDS 40.0%
TGATGTTTACCAGAATGCCA+GGG + chr2.1:3277590-3277609 MS.gene61204:CDS 40.0%
TGGAATTGTGTCTGTTGAGT+CGG + chr2.1:3279051-3279070 MS.gene61204:CDS 40.0%
TTCACAGCTACTCAAGTCTT+TGG + chr2.1:3277168-3277187 MS.gene61204:CDS 40.0%
TTGATGTTTACCAGAATGCC+AGG + chr2.1:3277589-3277608 MS.gene61204:CDS 40.0%
! ACCGATTACCTTCTGTTTCT+CGG - chr2.1:3280581-3280600 None:intergenic 40.0%
! ACTCCAGCAATTGTGTGTTT+TGG + chr2.1:3276937-3276956 MS.gene61204:CDS 40.0%
! CCTTTTCAGTTTCTCTTTCG+TGG + chr2.1:3278698-3278717 MS.gene61204:CDS 40.0%
! CTCAAAAAGGTGAGGCATTT+CGG + chr2.1:3280195-3280214 MS.gene61204:intron 40.0%
! CTTTGAAGAGGAAGAAACTG+AGG + chr2.1:3279231-3279250 MS.gene61204:CDS 40.0%
! GTTTTCCTTGGAATGTACCT+TGG - chr2.1:3279455-3279474 None:intergenic 40.0%
! TAATGGATGAGAAGGATGTG+AGG + chr2.1:3277697-3277716 MS.gene61204:CDS 40.0%
! TCAGCAGATTCTTTGGTAAC+TGG - chr2.1:3279259-3279278 None:intergenic 40.0%
! TCTGATTTGTCAGTCTCCAT+TGG - chr2.1:3281120-3281139 None:intergenic 40.0%
! TTATTGTCTGATTCGCTGTC+TGG - chr2.1:3278745-3278764 None:intergenic 40.0%
!! CTCTCTGGAATTGTCTATAG+CGG + chr2.1:3279727-3279746 MS.gene61204:intron 40.0%
!! CTTTAAAGTACGAGAGTTCC+AGG + chr2.1:3277983-3278002 MS.gene61204:CDS 40.0%
!! GCTATAAAGAGTACTCAGAC+AGG + chr2.1:3280464-3280483 MS.gene61204:CDS 40.0%
!! TCTCTGGAATTGTCTATAGC+GGG + chr2.1:3279728-3279747 MS.gene61204:intron 40.0%
!!! AGTGTGGTCGGTTTTGATTT+CGG + chr2.1:3276838-3276857 MS.gene61204:CDS 40.0%
!!! CCTTGTCACCGTTTTTAGTT+TGG - chr2.1:3278997-3279016 None:intergenic 40.0%
!!! CGACACTCATTTTAAAACGG+AGG - chr2.1:3278182-3278201 None:intergenic 40.0%
!!! CGACATTCATTTTGAAACGG+CGG + chr2.1:3278434-3278453 MS.gene61204:intron 40.0%
!!! GACATTCATTTTGAAACGGC+GGG + chr2.1:3278435-3278454 MS.gene61204:intron 40.0%
!!! GGTTTTGGTTTCGTCATGAT+CGG - chr2.1:3280934-3280953 None:intergenic 40.0%
!!! TTTTTTTTTTTTGGGGGGGG+GGG + chr2.1:3278073-3278092 MS.gene61204:intron 40.0%
AAAAAGCTGAGGCTGTCGAT+AGG + chr2.1:3280784-3280803 MS.gene61204:CDS 45.0%
AACGGTTTATTGGGACTGCT+GGG + chr2.1:3276968-3276987 MS.gene61204:CDS 45.0%
AACTTCAGGAGGTGGAAGAT+TGG + chr2.1:3280115-3280134 MS.gene61204:CDS 45.0%
AATGACAATGCAGGGGACAA+TGG + chr2.1:3281066-3281085 MS.gene61204:CDS 45.0%
AATGTCACTGAAGGACCTGA+TGG + chr2.1:3277102-3277121 MS.gene61204:CDS 45.0%
AATTGCTGGAGTTTCACGCT+TGG - chr2.1:3276929-3276948 None:intergenic 45.0%
ACATCGTTGTCATTGGAGCT+AGG - chr2.1:3279337-3279356 None:intergenic 45.0%
ACGCCCATGTGAAATCATTG+TGG + chr2.1:3279146-3279165 MS.gene61204:intron 45.0%
ACTTGCAGAAGCAGGTCTTA+CGG + chr2.1:3277797-3277816 MS.gene61204:CDS 45.0%
AGCATGCAAGTTTGCATTGC+CGG + chr2.1:3277447-3277466 MS.gene61204:CDS 45.0%
AGGAGATAAGCCTGTGCAAA+TGG + chr2.1:3279420-3279439 MS.gene61204:CDS 45.0%
AGGTGTATACAATGCCAAGC+TGG + chr2.1:3280167-3280186 MS.gene61204:CDS 45.0%
AGTTTGTCGTTGCTTCAGAG+AGG + chr2.1:3280076-3280095 MS.gene61204:CDS 45.0%
ATATCAGCTGACAAGAGGAC+GGG - chr2.1:3280759-3280778 None:intergenic 45.0%
ATCTTCCACCTCCTGAAGTT+TGG - chr2.1:3280115-3280134 None:intergenic 45.0%
ATGGATGAGAAGGATGTGAG+GGG + chr2.1:3277699-3277718 MS.gene61204:CDS 45.0%
CAAGCTGGAAGAGCTCAAAA+AGG + chr2.1:3280182-3280201 MS.gene61204:CDS 45.0%
CCATAAACTACCTCTGCAAC+AGG - chr2.1:3279825-3279844 None:intergenic 45.0%
CCCTGCATTGTCATTACTAC+CGG - chr2.1:3281061-3281080 None:intergenic 45.0%
CCGGTAGTAATGACAATGCA+GGG + chr2.1:3281058-3281077 MS.gene61204:CDS 45.0%
CCTGTTGCAGAGGTAGTTTA+TGG + chr2.1:3279822-3279841 MS.gene61204:CDS 45.0%
CGGTAGTAATGACAATGCAG+GGG + chr2.1:3281059-3281078 MS.gene61204:CDS 45.0%
CTAGGTATGGGATTTCCCTT+TGG - chr2.1:3278787-3278806 None:intergenic 45.0%
CTGAAGCAACGACAAACTCT+TGG - chr2.1:3280074-3280093 None:intergenic 45.0%
GAATATCCACATGGTTGAGG+TGG + chr2.1:3277824-3277843 MS.gene61204:CDS 45.0%
GATGGTGAAGACGAAACCAA+AGG + chr2.1:3280147-3280166 MS.gene61204:CDS 45.0%
GCCGAGAAACAGAAGGTAAT+CGG + chr2.1:3280577-3280596 MS.gene61204:intron 45.0%
GCTGTGTTTGTAACAGGTTG+AGG + chr2.1:3279767-3279786 MS.gene61204:intron 45.0%
GGCAACTGTTGATGTTCAGA+AGG + chr2.1:3279851-3279870 MS.gene61204:CDS 45.0%
GTCTCGTGAATCAAGTGAAG+CGG - chr2.1:3277336-3277355 None:intergenic 45.0%
GTTTGTCGTTGCTTCAGAGA+GGG + chr2.1:3280077-3280096 MS.gene61204:CDS 45.0%
TACCTCTGCAACAGGAATGT+TGG - chr2.1:3279817-3279836 None:intergenic 45.0%
TACTGTCCCATTCGTACGAT+AGG + chr2.1:3277493-3277512 MS.gene61204:CDS 45.0%
TCTCGTGAATCAAGTGAAGC+GGG - chr2.1:3277335-3277354 None:intergenic 45.0%
TCTTCAGAGGAGAGCTGTAT+TGG + chr2.1:3277284-3277303 MS.gene61204:CDS 45.0%
TGACATTGCCGAGAAACAGA+AGG + chr2.1:3280570-3280589 MS.gene61204:CDS 45.0%
TGCTTGTGAGAAGCTGAAGA+AGG + chr2.1:3277632-3277651 MS.gene61204:CDS 45.0%
TGGAAGAGCTCAAAAAGGTG+AGG + chr2.1:3280187-3280206 MS.gene61204:intron 45.0%
TGTTCAGAAGGCTGTAGAGA+AGG + chr2.1:3279863-3279882 MS.gene61204:CDS 45.0%
TTCAAATCCCTCTGCAGTTC+CGG - chr2.1:3277069-3277088 None:intergenic 45.0%
! AAAAGGTGAGGCATTTCGGA+TGG + chr2.1:3280199-3280218 MS.gene61204:intron 45.0%
! CAGCTGCCCCTTTTTAAATC+CGG - chr2.1:3277469-3277488 None:intergenic 45.0%
! CGAGTGCTTAATGGATGAGA+AGG + chr2.1:3277689-3277708 MS.gene61204:CDS 45.0%
! GAAGATTGGCTATACGAGGA+TGG + chr2.1:3280129-3280148 MS.gene61204:CDS 45.0%
! GCTGTTGTTGATTGCTGCAT+TGG + chr2.1:3277240-3277259 MS.gene61204:CDS 45.0%
! TACAGCTCTCCTCTGAAGAT+CGG - chr2.1:3277283-3277302 None:intergenic 45.0%
! TGACTGGCTGTGTTTGTAAC+AGG + chr2.1:3279761-3279780 MS.gene61204:intron 45.0%
! TTTCGTCATGATCGGCTTAC+AGG - chr2.1:3280926-3280945 None:intergenic 45.0%
!! AGCGGGGTTTGTTATTTGAC+TGG + chr2.1:3279745-3279764 MS.gene61204:intron 45.0%
!! CTCTGGAATTGTCTATAGCG+GGG + chr2.1:3279729-3279748 MS.gene61204:intron 45.0%
!! CTTTTTGAGCTCTTCCAGCT+TGG - chr2.1:3280184-3280203 None:intergenic 45.0%
!!! TTTTTTTTTTTGGGGGGGGG+GGG + chr2.1:3278074-3278093 MS.gene61204:intron 45.0%
!!! TTTTTTTTTTTTTTTTTTTG+GGG + chr2.1:3278066-3278085 MS.gene61204:intron 5.0%
AACCAACCACCTCAACCATG+TGG - chr2.1:3277833-3277852 None:intergenic 50.0%
AAGGTAACTGCTGATACCCC+TGG + chr2.1:3279373-3279392 MS.gene61204:CDS 50.0%
AATCAAGTCCCACCAGTCTC+TGG + chr2.1:3281090-3281109 MS.gene61204:CDS 50.0%
AATCCCTCTCTGCCTTGCAA+CGG - chr2.1:3276884-3276903 None:intergenic 50.0%
ACAACCAGAACAGCAACCTC+AGG + chr2.1:3281023-3281042 MS.gene61204:CDS 50.0%
ACAGCAACTGCCTTGGCTTA+TGG + chr2.1:3277357-3277376 MS.gene61204:CDS 50.0%
ACGGTTTATTGGGACTGCTG+GGG + chr2.1:3276969-3276988 MS.gene61204:CDS 50.0%
AGCATGCCCAACATCAACGA+AGG - chr2.1:3277427-3277446 None:intergenic 50.0%
AGGTAACTGCTGATACCCCT+GGG + chr2.1:3279374-3279393 MS.gene61204:CDS 50.0%
ATCCACATGGTTGAGGTGGT+TGG + chr2.1:3277828-3277847 MS.gene61204:CDS 50.0%
CAACGGTTTATTGGGACTGC+TGG + chr2.1:3276967-3276986 MS.gene61204:CDS 50.0%
CAGGGACCTATCGTACGAAT+GGG - chr2.1:3277502-3277521 None:intergenic 50.0%
CATTCGTACGATAGGTCCCT+GGG + chr2.1:3277501-3277520 MS.gene61204:CDS 50.0%
CCAATCTTGGAGCGTGTGAA+GGG + chr2.1:3277759-3277778 MS.gene61204:CDS 50.0%
CTAGCATTCATAGTCCGCCT+AGG - chr2.1:3277912-3277931 None:intergenic 50.0%
GACCAACATTCCTGTTGCAG+AGG + chr2.1:3279812-3279831 MS.gene61204:CDS 50.0%
GACGAAACCAAAACCGAAGC+CGG + chr2.1:3280939-3280958 MS.gene61204:CDS 50.0%
GATAGCTGGTACACGAGAAC+CGG - chr2.1:3277856-3277875 None:intergenic 50.0%
GCCGGTAGTAATGACAATGC+AGG + chr2.1:3281057-3281076 MS.gene61204:CDS 50.0%
GTCAAAATCCCTACCACCCA+GGG - chr2.1:3277520-3277539 None:intergenic 50.0%
TATCAGCTGACAAGAGGACG+GGG - chr2.1:3280758-3280777 None:intergenic 50.0%
TCCAATCTTGGAGCGTGTGA+AGG + chr2.1:3277758-3277777 MS.gene61204:CDS 50.0%
TCGTTGTCATTGGAGCTAGG+AGG - chr2.1:3279334-3279353 None:intergenic 50.0%
TCTGCAAGATCGAGTGATGG+AGG + chr2.1:3279899-3279918 MS.gene61204:CDS 50.0%
TCTGCAAGTGCCTTCTCCAA+AGG - chr2.1:3277786-3277805 None:intergenic 50.0%
TTGGATGCAGCCACTATTGC+AGG + chr2.1:3277303-3277322 MS.gene61204:CDS 50.0%
TTGTCATTGGAGCTAGGAGG+TGG - chr2.1:3279331-3279350 None:intergenic 50.0%
! ATGGTTGAGGTGGTTGGTTC+CGG + chr2.1:3277834-3277853 MS.gene61204:CDS 50.0%
! GGTGGAAGATTGGCTATACG+AGG + chr2.1:3280125-3280144 MS.gene61204:CDS 50.0%
! GGTGGAGTTGTTGGTGTTTC+TGG - chr2.1:3280979-3280998 None:intergenic 50.0%
! GTGGAAGGAGAGAGCTTGTT+TGG + chr2.1:3279587-3279606 MS.gene61204:intron 50.0%
! TGTGAAGGGACCTTTGGAGA+AGG + chr2.1:3277773-3277792 MS.gene61204:CDS 50.0%
!! AGGACGGGGTTGGCAAATTT+TGG - chr2.1:3280744-3280763 None:intergenic 50.0%
!! GTTGGTGTTTCTGGAGTAGC+TGG - chr2.1:3280970-3280989 None:intergenic 50.0%
!! TGTTTCTGGAGTAGCTGGCT+TGG - chr2.1:3280965-3280984 None:intergenic 50.0%
!!! TTTTTTTTTTGGGGGGGGGG+GGG + chr2.1:3278075-3278094 MS.gene61204:intron 50.0%
ACAACTCCACCTCCTCAGGA+AGG + chr2.1:3280988-3281007 MS.gene61204:CDS 55.0%
ACAGGCTTATCTCCTGCCTC+AGG - chr2.1:3279415-3279434 None:intergenic 55.0%
ACCAACAACTCCACCTCCTC+AGG + chr2.1:3280984-3281003 MS.gene61204:CDS 55.0%
ACCAGAACAGCAACCTCAGG+AGG + chr2.1:3281026-3281045 MS.gene61204:CDS 55.0%
ACCAGTCTCTGGCGAACCAA+TGG + chr2.1:3281101-3281120 MS.gene61204:CDS 55.0%
AGAATGCCAGGGCTTGTCTG+AGG + chr2.1:3277601-3277620 MS.gene61204:CDS 55.0%
ATGCTAGCGAGTGTGTTGCC+AGG + chr2.1:3277925-3277944 MS.gene61204:CDS 55.0%
CCAGGGACCTATCGTACGAA+TGG - chr2.1:3277503-3277522 None:intergenic 55.0%
CCATTCGTACGATAGGTCCC+TGG + chr2.1:3277500-3277519 MS.gene61204:CDS 55.0%
CCCTTCACACGCTCCAAGAT+TGG - chr2.1:3277762-3277781 None:intergenic 55.0%
CCTCAGGAGGATGCTAATGC+CGG + chr2.1:3281039-3281058 MS.gene61204:CDS 55.0%
CGAGACAACAGCAACTGCCT+TGG + chr2.1:3277350-3277369 MS.gene61204:CDS 55.0%
CGGGTGCAAACCTGCAATAG+TGG - chr2.1:3277316-3277335 None:intergenic 55.0%
CGTCAAAATCCCTACCACCC+AGG - chr2.1:3277521-3277540 None:intergenic 55.0%
GAAAATGGCATGCCTGAGGC+AGG + chr2.1:3279400-3279419 MS.gene61204:CDS 55.0%
GATACCCCTGGGGCTGAAAA+TGG + chr2.1:3279385-3279404 MS.gene61204:CDS 55.0%
GCTGCATTGTTGCCGTTGCA+AGG + chr2.1:3276869-3276888 MS.gene61204:CDS 55.0%
GGCTCTGCAAGATCGAGTGA+TGG + chr2.1:3279896-3279915 MS.gene61204:CDS 55.0%
GGCTGAAAATGGCATGCCTG+AGG + chr2.1:3279396-3279415 MS.gene61204:CDS 55.0%
GGTAACTGCTGATACCCCTG+GGG + chr2.1:3279375-3279394 MS.gene61204:CDS 55.0%
GGTCCTCAGTGCAAATCCAG+AGG + chr2.1:3277653-3277672 MS.gene61204:CDS 55.0%
GTGCCTCTGGATTTGCACTG+AGG - chr2.1:3277659-3277678 None:intergenic 55.0%
TCAGACAAGCCCTGGCATTC+TGG - chr2.1:3277602-3277621 None:intergenic 55.0%
TCCTGAGGAGGTGGAGTTGT+TGG - chr2.1:3280988-3281007 None:intergenic 55.0%
TGCTAGCGAGTGTGTTGCCA+GGG + chr2.1:3277926-3277945 MS.gene61204:CDS 55.0%
TGCTGATCCGGAACTGCAGA+GGG + chr2.1:3277059-3277078 MS.gene61204:CDS 55.0%
TTGCCGTTGCAAGGCAGAGA+GGG + chr2.1:3276878-3276897 MS.gene61204:CDS 55.0%
TTGCTGATCCGGAACTGCAG+AGG + chr2.1:3277058-3277077 MS.gene61204:CDS 55.0%
! CAGGGCTTGTCTGAGGTTGA+GGG + chr2.1:3277608-3277627 MS.gene61204:CDS 55.0%
! TCCTCCTGAGGTTGCTGTTC+TGG - chr2.1:3281030-3281049 None:intergenic 55.0%
! TTGGTTCGCCAGAGACTGGT+GGG - chr2.1:3281101-3281120 None:intergenic 55.0%
!! ATTGGTTCGCCAGAGACTGG+TGG - chr2.1:3281102-3281121 None:intergenic 55.0%
!! GAGAAGGCACTTGCAGAAGC+AGG + chr2.1:3277789-3277808 MS.gene61204:CDS 55.0%
!! GGGTGGTAGGGATTTTGACG+AGG + chr2.1:3277521-3277540 MS.gene61204:CDS 55.0%
!! TCCATTGGTTCGCCAGAGAC+TGG - chr2.1:3281105-3281124 None:intergenic 55.0%
!! TCGATGTTCAGAGGTGCCTC+TGG - chr2.1:3277672-3277691 None:intergenic 55.0%
!!! CATGCCATTTTCAGCCCCAG+GGG - chr2.1:3279392-3279411 None:intergenic 55.0%
!!! GCATGCCATTTTCAGCCCCA+GGG - chr2.1:3279393-3279412 None:intergenic 55.0%
!!! TTTTTTTTTGGGGGGGGGGG+GGG + chr2.1:3278076-3278095 MS.gene61204:intron 55.0%
ACACTGCAATGCAGCACCCC+TGG - chr2.1:3277946-3277965 None:intergenic 60.0%
ACGATAGGTCCCTGGGTGGT+AGG + chr2.1:3277508-3277527 MS.gene61204:CDS 60.0%
AGCTGACAAGAGGACGGGGT+TGG - chr2.1:3280754-3280773 None:intergenic 60.0%
CCGGCATTAGCATCCTCCTG+AGG - chr2.1:3281042-3281061 None:intergenic 60.0%
CCTCAACCTCAGACAAGCCC+TGG - chr2.1:3277610-3277629 None:intergenic 60.0%
CGATAGGTCCCTGGGTGGTA+GGG + chr2.1:3277509-3277528 MS.gene61204:CDS 60.0%
GCTAGCGAGTGTGTTGCCAG+GGG + chr2.1:3277927-3277946 MS.gene61204:CDS 60.0%
GGAGCGTGTGAAGGGACCTT+TGG + chr2.1:3277767-3277786 MS.gene61204:CDS 60.0%
GTTGCCGTTGCAAGGCAGAG+AGG + chr2.1:3276877-3276896 MS.gene61204:CDS 60.0%
TCGTACGATAGGTCCCTGGG+TGG + chr2.1:3277504-3277523 MS.gene61204:CDS 60.0%
TGCTCACCTTCCTGAGGAGG+TGG - chr2.1:3280997-3281016 None:intergenic 60.0%
TGCTGCTCACCTTCCTGAGG+AGG - chr2.1:3281000-3281019 None:intergenic 60.0%
TGCTGCTGCTCACCTTCCTG+AGG - chr2.1:3281003-3281022 None:intergenic 60.0%
! CCAGGGCTTGTCTGAGGTTG+AGG + chr2.1:3277607-3277626 MS.gene61204:CDS 60.0%
!! TCTGGAGTAGCTGGCTTGGC+CGG - chr2.1:3280961-3280980 None:intergenic 60.0%
!!! GGCATGCCATTTTCAGCCCC+AGG - chr2.1:3279394-3279413 None:intergenic 60.0%
!!! TTTTTTTTGGGGGGGGGGGG+GGG + chr2.1:3278077-3278096 MS.gene61204:intron 60.0%
GGTGGTGCAGCAGCATCAGC+AGG - chr2.1:3279313-3279332 None:intergenic 65.0%
!! GGCTTGGCCGGCTTCGGTTT+TGG - chr2.1:3280949-3280968 None:intergenic 65.0%
!! GTAGCTGGCTTGGCCGGCTT+CGG - chr2.1:3280955-3280974 None:intergenic 65.0%
!!! TTTTTTTGGGGGGGGGGGGG+GGG + chr2.1:3278078-3278097 MS.gene61204:intron 65.0%
!!! TTTTTTGGGGGGGGGGGGGG+GGG + chr2.1:3278079-3278098 MS.gene61204:intron 70.0%
!! TTTTTGGGGGGGGGGGGGGG+GGG + chr2.1:3278080-3278099 MS.gene61204:intron 75.0%
!!! TTTTGGGGGGGGGGGGGGGG+GGG + chr2.1:3278081-3278100 MS.gene61204:intron 80.0%
! TTTGGGGGGGGGGGGGGGGG+GGG + chr2.1:3278082-3278101 MS.gene61204:intron 85.0%
! TTGGGGGGGGGGGGGGGGGG+GGG + chr2.1:3278083-3278102 MS.gene61204:intron 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr2.1:3278084-3278103 MS.gene61204:intron 95.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 3276835 3281158 3276835 ID=MS.gene61204
chr2.1 mRNA 3276835 3281158 3276835 ID=MS.gene61204.t1;Parent=MS.gene61204
chr2.1 exon 3276835 3278004 3276835 ID=MS.gene61204.t1.exon1;Parent=MS.gene61204.t1
chr2.1 CDS 3276835 3278004 3276835 ID=cds.MS.gene61204.t1;Parent=MS.gene61204.t1
chr2.1 exon 3278682 3278903 3278682 ID=MS.gene61204.t1.exon2;Parent=MS.gene61204.t1
chr2.1 CDS 3278682 3278903 3278682 ID=cds.MS.gene61204.t1;Parent=MS.gene61204.t1
chr2.1 exon 3278983 3279078 3278983 ID=MS.gene61204.t1.exon3;Parent=MS.gene61204.t1
chr2.1 CDS 3278983 3279078 3278983 ID=cds.MS.gene61204.t1;Parent=MS.gene61204.t1
chr2.1 exon 3279229 3279456 3279229 ID=MS.gene61204.t1.exon4;Parent=MS.gene61204.t1
chr2.1 CDS 3279229 3279456 3279229 ID=cds.MS.gene61204.t1;Parent=MS.gene61204.t1
chr2.1 exon 3279783 3279977 3279783 ID=MS.gene61204.t1.exon5;Parent=MS.gene61204.t1
chr2.1 CDS 3279783 3279977 3279783 ID=cds.MS.gene61204.t1;Parent=MS.gene61204.t1
chr2.1 exon 3280057 3280203 3280057 ID=MS.gene61204.t1.exon6;Parent=MS.gene61204.t1
chr2.1 CDS 3280057 3280203 3280057 ID=cds.MS.gene61204.t1;Parent=MS.gene61204.t1
chr2.1 exon 3280442 3280591 3280442 ID=MS.gene61204.t1.exon7;Parent=MS.gene61204.t1
chr2.1 CDS 3280442 3280591 3280442 ID=cds.MS.gene61204.t1;Parent=MS.gene61204.t1
chr2.1 exon 3280675 3280805 3280675 ID=MS.gene61204.t1.exon8;Parent=MS.gene61204.t1
chr2.1 CDS 3280675 3280805 3280675 ID=cds.MS.gene61204.t1;Parent=MS.gene61204.t1
chr2.1 exon 3280921 3281158 3280921 ID=MS.gene61204.t1.exon9;Parent=MS.gene61204.t1
chr2.1 CDS 3280921 3281158 3280921 ID=cds.MS.gene61204.t1;Parent=MS.gene61204.t1
Gene Sequence

>MS.gene61204

ATGAGTGTGGTCGGTTTTGATTTCGGTAATGAGAGCTGCATTGTTGCCGTTGCAAGGCAGAGAGGGATTGATGTTGTGCTCAACGATGAGTCCAAGCGTGAAACTCCAGCAATTGTGTGTTTTGGTGACAAACAACGGTTTATTGGGACTGCTGGGGCTGCTTCAACTATGATGAATCCGAAAAATTCAATCTCGCAGATAAAGAGATTGATTGGTAAAAAATTTGCTGATCCGGAACTGCAGAGGGATTTGAAGTCATTGCCTTTTAATGTCACTGAAGGACCTGATGGATATCCATTGATTCATGCACGATATCTGGGCGAATCTAGAGAATTCACAGCTACTCAAGTCTTTGGGATGATGTTGTCGAATCTTAAAGAAATAGCTCAGAAAAATCTGAATGCGGCTGTTGTTGATTGCTGCATTGGAATTCCAGTCTACTTTACCGATCTTCAGAGGAGAGCTGTATTGGATGCAGCCACTATTGCAGGTTTGCACCCGCTTCACTTGATTCACGAGACAACAGCAACTGCCTTGGCTTATGGAATTTATAAGACTGATCTTCCGGAAAATGAATGGCTGAATGTTGCCTTCGTTGATGTTGGGCATGCTAGCATGCAAGTTTGCATTGCCGGATTTAAAAAGGGGCAGCTGCAAGTACTGTCCCATTCGTACGATAGGTCCCTGGGTGGTAGGGATTTTGACGAGGCTCTTTTCCATCATTTTGCTGCCAAATTTAAGGAGGAATATAAGGTTGATGTTTACCAGAATGCCAGGGCTTGTCTGAGGTTGAGGGCTGCTTGTGAGAAGCTGAAGAAGGTCCTCAGTGCAAATCCAGAGGCACCTCTGAACATCGAGTGCTTAATGGATGAGAAGGATGTGAGGGGATTCATCAAGCGTGATGATTTTGAGCAACTATCTCTTCCAATCTTGGAGCGTGTGAAGGGACCTTTGGAGAAGGCACTTGCAGAAGCAGGTCTTACGGTTGAGAATATCCACATGGTTGAGGTGGTTGGTTCCGGTTCTCGTGTACCAGCTATCAACAAAATATTGACAGAGTTCTTCAAAAAGGAACCTAGGCGGACTATGAATGCTAGCGAGTGTGTTGCCAGGGGTGCTGCATTGCAGTGTGCAATTCTCAGTCCAACCTTTAAAGTACGAGAGTTCCAGGTAAATTTTCTATGCTGTACTCTCAACCAGTATGTTCTGTATTTTTGGCATATGTTTTGTATTTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGGGAGTTGTTAGTGTTATATGGCATATGTTAGAGAAATCAAAAGTAGTAGATTTACATGAAAATCAATACTCCCTCCGTTTTAAAATGAGTGTCGTTTTAGCCAAAAAAAATTGTTTCAAAATGAATGTCGCTTTCAATTTTCAATGCAATAATAACTTTTTCTTTTCAATTGTACCCTTCAATTAATACTATATACACATAATTCCGTAGTATTATTTTTTCTTTAATGAAAAACAAACCAATAGTTGATTAGGATAATTTGGTAAAATAACATATCTCTTTCTTTTAATTAATGCATTTCTTAATATGTGTGTAAAAACCTTAAACGACATTCATTTTGAAACGGCGGGAGTAATATTTTGACTTTCAAAAAGTCAAATTCATCTCTTTTCACCATTTTCCAATGCAATATTTCTATTTGTATCTTCTTAACCAATGTCATAAGGACACTCTTTAGCATTTCCCTTGTTATATTTACAAATTGACCATTTTTTGCGGAGAGTTGCATGCGTTCTAATGAGTATAATGTATTGCTTAATGTACTAACAACATTTGTTTACTTCATTATGAGAAGGTCAACGAAAGCTTCCCCTTTTCAGTTTCTCTTTCGTGGAAATCTTCTGGTTCAGATGCACCAGACAGCGAATCAGACAATAAGCAAAGTACCATTGTTTTCCCAAAGGGAAATCCCATACCTAGTTCCAAGGTATTGACATTCTTCAGAACAGGAACCTTTTCTGTTGATGTACAATGTCATGATCTCAGTGAAACGCCTACGAAAATCAGCACATATACTGTAAGTCAGTTTTCATGTTCTTGTACGTTTTACAATATTTTTCCCTATTGGCAGTCTTTTGACTCTTGCATTTGTGCAGATTGGCCCTTTCCAAACTAAAAACGGTGACAAGGGAAAGGTTAAAGCAAAAGTTCGTTTGAATCTTCATGGAATTGTGTCTGTTGAGTCGGCAACAGTAAGTTTTTGTATGCTTAGCGACTGTTATGTTTTTTTTTTTTTTTATTCTTCCTTCTTTTCTAATTACGCCCATGTGAAATCATTGTGGTAAACTCCAGAGCGTTTGTTATTGAATTGTTCTTTTTTTTTTTTTTTTTTTTTTGTTAAGCTCTTTGAAGAGGAAGAAACTGAGGTTCCAGTTACCAAAGAATCTGCTGAAGAAAATGCTAAGATGGAAACTGACGAAGCTCCTGCTGATGCTGCTGCACCACCTCCTAGCTCCAATGACAACGATGTTAATATGCAAGATGCTAAGGTAACTGCTGATACCCCTGGGGCTGAAAATGGCATGCCTGAGGCAGGAGATAAGCCTGTGCAAATGGATACAGATACCAAGGTACATTCCAAGGAAAACATTTTTGTGTGCTCAAATAATTTGTTTTCATCCACTTCAATGTGTGCTCAAATAGTTTGTTTTTGACTTGTGTTGTTGCTTTCTTGTATGATTTAATTTTCTTATTTCTATTGTGGAAGGAGAGAGCTTGTTTGGTTTCAAGTTTTCAGACAAACTTATATTTGGTTTTTTTCTTGTTAATTTTATAATAACGCGTAGTTTGCAGATGTTTGTGATTTATAAAGTTCTTGTTGGATATTATGCATCAATAAGCTCTCTGGAATTGTCTATAGCGGGGTTTGTTATTTGACTGGCTGTGTTTGTAACAGGTTGAGGCTCCAAAGAAAAAAGTGAAGAAGACCAACATTCCTGTTGCAGAGGTAGTTTATGGTGCAATGGCAACTGTTGATGTTCAGAAGGCTGTAGAGAAGGAGTTTGAAATGGCTCTGCAAGATCGAGTGATGGAGGAAACAAAAGACAAGAAAAATGCAGTTGAGGCTTATGTCTATGACATGAGAAATAAGGTTAGGATTGTATTGTTTTTTCTTGTTTCTTTCAAATGGTAGTATTTGATTATTAATTGATTTCTTGTTATCAATACAGCTTAATGACAAATACCAAGAGTTTGTCGTTGCTTCAGAGAGGGATGAATTTATTACCAAACTTCAGGAGGTGGAAGATTGGCTATACGAGGATGGTGAAGACGAAACCAAAGGTGTATACAATGCCAAGCTGGAAGAGCTCAAAAAGGTGAGGCATTTCGGATGGTCTTTACTCTTAGCTGAACTGGTATAAAAAAGTCTCGATGGTGGTTGTATGTTGTAGAGATTCCTTTGATAGCTATCAACACTTTTCAAAATGACTAGGGGCACCATGCATACATACTTTCGTTTACTACTTTTGTGTAACAAGCAATATGTGAAGGTCCACTGTAGTTATAGTTTTTGCACTCTTAATGAACTTTTTTTTTTTTTTTTAATAATTGTAGCAAGGGGATCCAATTGAAGAGCGCTATAAAGAGTACTCAGACAGGGGTGAAGTAATTGATCAACTGATCTATTGTATAAAAAGTTATAGAGAAGCTGCAATGTCTAATGATCCCAAATTTGATCACATTGACATTGCCGAGAAACAGAAGGTAATCGGTATCCAATACTAACACTTCTAATTCATTTCTGGTTGACTTGTAATCTGAAAGTGTTTTCTATTTAAATTTTTTAGGTCTTGAATGAATGTGTAGAAGCTGAGAATTGGCTCAGAGAGAAGAAGCAACAACAAGACTTGCTTCCAAAATTTGCCAACCCCGTCCTCTTGTCAGCTGATATAAGAAAAAAAGCTGAGGCTGTCGATAGGTATATGTTGTACCTTTATGGATCGAGACTATTATGGTTCTGGCAAAATAGATTCATGTACTAGTTTATTAATCTTTTTTGTATCTAATAATTCTAATTATGTTATCTACAATAGGTCCTGTAAGCCGATCATGACGAAACCAAAACCGAAGCCGGCCAAGCCAGCTACTCCAGAAACACCAACAACTCCACCTCCTCAGGAAGGTGAGCAGCAGCAACAACCAGAACAGCAACCTCAGGAGGATGCTAATGCCGGTAGTAATGACAATGCAGGGGACAATGGTAATCAAGTCCCACCAGTCTCTGGCGAACCAATGGAGACTGACAAATCAGAGAACACAGGCTCAGCCTAA

Protein sequence

>MS.gene61204.t1

MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGKKFADPELQRDLKSLPFNVTEGPDGYPLIHARYLGESREFTATQVFGMMLSNLKEIAQKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLHLIHETTATALAYGIYKTDLPENEWLNVAFVDVGHASMQVCIAGFKKGQLQVLSHSYDRSLGGRDFDEALFHHFAAKFKEEYKVDVYQNARACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGFIKRDDFEQLSLPILERVKGPLEKALAEAGLTVENIHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGAALQCAILSPTFKVREFQVNESFPFSVSLSWKSSGSDAPDSESDNKQSTIVFPKGNPIPSSKVLTFFRTGTFSVDVQCHDLSETPTKISTYTIGPFQTKNGDKGKVKAKVRLNLHGIVSVESATLFEEEETEVPVTKESAEENAKMETDEAPADAAAPPPSSNDNDVNMQDAKVTADTPGAENGMPEAGDKPVQMDTDTKVEAPKKKVKKTNIPVAEVVYGAMATVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVVASERDEFITKLQEVEDWLYEDGEDETKGVYNAKLEELKKQGDPIEERYKEYSDRGEVIDQLIYCIKSYREAAMSNDPKFDHIDIAEKQKVLNECVEAENWLREKKQQQDLLPKFANPVLLSADIRKKAEAVDRSCKPIMTKPKPKPAKPATPETPTTPPPQEGEQQQQPEQQPQEDANAGSNDNAGDNGNQVPPVSGEPMETDKSENTGSA