AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36291


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36291.t1 MTR_2g102180 98.019 858 17 0 1 858 1 858 0.0 1742
MS.gene36291.t1 MTR_4g012050 80.465 860 157 5 1 858 1 851 0.0 1339
MS.gene36291.t1 MTR_5g092570 50.694 793 344 8 1 787 1 752 0.0 790
MS.gene36291.t1 MTR_3g051300 49.873 790 346 5 1 786 1 744 0.0 776
MS.gene36291.t1 MTR_7g099680 33.758 471 293 6 4 469 10 466 3.37e-85 285
MS.gene36291.t1 MTR_4g063710 33.333 471 295 6 4 469 10 466 1.63e-83 281
MS.gene36291.t1 MTR_7g024390 34.703 438 270 4 4 438 10 434 2.13e-83 281
MS.gene36291.t1 MTR_4g130540 34.475 438 271 4 4 438 9 433 1.33e-82 278
MS.gene36291.t1 MTR_7g024580 33.623 461 288 5 4 459 10 457 3.32e-82 277
MS.gene36291.t1 MTR_6g033955 34.821 448 267 6 4 441 10 442 2.63e-81 275
MS.gene36291.t1 MTR_4g063720 32.696 471 298 6 4 469 10 466 5.20e-81 274
MS.gene36291.t1 MTR_6g033760 36.406 434 258 7 4 433 10 429 2.39e-79 269
MS.gene36291.t1 MTR_6g033820 34.157 445 268 6 4 438 10 439 6.43e-77 264
MS.gene36291.t1 MTR_6g033850 34.793 434 263 6 4 432 10 428 6.61e-77 264
MS.gene36291.t1 MTR_3g081170 27.910 842 510 26 2 780 25 832 5.08e-76 266
MS.gene36291.t1 MTR_6g033870 33.485 439 270 6 4 433 11 436 8.41e-76 261
MS.gene36291.t1 MTR_8g032650 33.836 464 280 8 4 463 10 450 2.17e-75 258
MS.gene36291.t1 MTR_8g099945 32.759 464 289 7 2 459 37 483 4.48e-75 258
MS.gene36291.t1 MTR_7g024030 33.713 439 274 7 4 438 10 435 9.96e-75 256
MS.gene36291.t1 MTR_7g078190 34.491 432 267 5 4 431 10 429 1.69e-74 256
MS.gene36291.t1 MTR_7g025760 32.802 439 278 5 4 438 10 435 1.75e-74 256
MS.gene36291.t1 MTR_7g026030 33.257 436 272 6 4 434 10 431 2.42e-74 255
MS.gene36291.t1 MTR_2g038260 33.182 440 278 6 4 439 10 437 5.76e-74 254
MS.gene36291.t1 MTR_7g451380 34.974 386 245 5 4 385 10 393 9.78e-74 253
MS.gene36291.t1 MTR_8g099795 32.112 464 292 7 2 459 37 483 1.19e-73 254
MS.gene36291.t1 MTR_7g029415 33.483 445 276 8 4 442 17 447 3.51e-73 252
MS.gene36291.t1 MTR_7g025790 32.974 464 284 8 4 463 10 450 5.54e-73 251
MS.gene36291.t1 MTR_7g025740 33.333 453 278 8 4 452 10 442 6.96e-73 252
MS.gene36291.t1 MTR_2g040370 35.356 379 241 2 4 381 1030 1405 8.17e-73 262
MS.gene36291.t1 MTR_2g040370 33.947 380 246 3 4 381 1414 1790 4.90e-61 226
MS.gene36291.t1 MTR_2g040370 35.356 379 241 2 4 381 1030 1405 8.99e-73 261
MS.gene36291.t1 MTR_2g040370 33.947 380 246 3 4 381 1414 1790 5.53e-61 226
MS.gene36291.t1 MTR_7g025820 32.805 442 280 5 4 441 10 438 5.63e-72 248
MS.gene36291.t1 MTR_5g066800 34.140 413 256 5 4 401 10 421 6.89e-72 249
MS.gene36291.t1 MTR_7g026170 33.333 435 274 6 4 434 10 432 8.74e-72 248
MS.gene36291.t1 MTR_7g021440 36.483 381 238 4 4 381 10 389 8.77e-72 248
MS.gene36291.t1 MTR_7g026110 33.636 440 272 8 4 438 10 434 1.90e-71 247
MS.gene36291.t1 MTR_2g032550 33.182 440 277 6 4 439 11 437 3.13e-71 247
MS.gene36291.t1 MTR_7g025770 32.754 403 266 5 4 402 10 411 9.37e-71 245
MS.gene36291.t1 MTR_2g040160 35.770 383 242 2 4 385 1110 1489 1.40e-70 255
MS.gene36291.t1 MTR_2g040260 34.987 383 245 2 4 385 1039 1418 2.83e-70 254
MS.gene36291.t1 MTR_2g017730 32.045 440 277 5 4 434 9 435 2.87e-70 244
MS.gene36291.t1 MTR_7g025720 32.280 443 281 6 4 441 10 438 5.50e-70 243
MS.gene36291.t1 MTR_7g026090 32.353 442 274 6 4 438 10 433 5.65e-70 243
MS.gene36291.t1 MTR_7g026130 31.713 432 281 5 4 431 10 431 2.15e-69 244
MS.gene36291.t1 MTR_2g437440 31.729 457 289 7 4 455 10 448 6.40e-69 240
MS.gene36291.t1 MTR_4g079590 31.019 432 281 6 4 431 10 428 1.13e-68 239
MS.gene36291.t1 MTR_7g078210 32.333 433 276 5 4 432 10 429 1.36e-68 239
MS.gene36291.t1 MTR_7g025620 31.746 441 284 5 2 438 8 435 1.74e-68 239
MS.gene36291.t1 MTR_2g032580 32.176 432 276 5 4 431 10 428 1.32e-67 236
MS.gene36291.t1 MTR_7g025630 35.433 381 228 5 4 381 10 375 1.14e-66 234
MS.gene36291.t1 MTR_2g010020 33.416 404 251 5 3 401 56 446 7.04e-66 233
MS.gene36291.t1 MTR_2g010020 33.416 404 251 5 3 401 57 447 7.61e-66 233
MS.gene36291.t1 MTR_2g022050 33.506 385 252 3 4 385 10 393 5.73e-65 229
MS.gene36291.t1 MTR_7g451360 32.727 385 225 4 4 385 10 363 7.41e-65 228
MS.gene36291.t1 MTR_2g038270 30.995 442 279 8 3 431 9 437 9.69e-65 229
MS.gene36291.t1 MTR_7g011590 32.090 402 256 5 4 401 10 398 2.09e-64 228
MS.gene36291.t1 MTR_2g040350 34.021 388 248 3 3 385 1038 1422 8.56e-64 234
MS.gene36291.t1 MTR_2g040350 34.021 388 248 3 3 385 820 1204 1.43e-63 233
MS.gene36291.t1 MTR_8g103930 32.589 448 258 10 4 436 12 430 7.36e-63 223
MS.gene36291.t1 MTR_4g027145 31.183 465 284 10 4 450 10 456 2.16e-62 223
MS.gene36291.t1 MTR_4g092920 31.188 404 261 5 3 401 53 444 4.54e-62 223
MS.gene36291.t1 MTR_7g025260 33.249 397 248 6 42 434 20 403 2.63e-61 219
MS.gene36291.t1 MTR_2g032160 32.609 368 242 4 4 367 10 375 6.36e-61 214
MS.gene36291.t1 MTR_2g040220 33.770 382 240 6 4 378 1019 1394 1.04e-60 225
MS.gene36291.t1 MTR_7g026140 30.769 403 258 6 4 402 10 395 2.85e-60 216
MS.gene36291.t1 MTR_1g017130 27.816 435 259 7 4 434 10 393 1.82e-57 208
MS.gene36291.t1 MTR_6g033800 35.514 321 201 4 84 401 1 318 1.80e-56 204
MS.gene36291.t1 MTR_1g077230 37.091 275 168 3 4 275 10 282 1.32e-55 194
MS.gene36291.t1 MTR_7g035155 30.769 403 221 6 4 402 10 358 5.28e-55 200
MS.gene36291.t1 MTR_7g074460 29.638 442 276 8 4 441 10 420 3.91e-54 198
MS.gene36291.t1 MTR_2g005690 30.700 443 275 9 3 438 71 488 5.00e-54 200
MS.gene36291.t1 MTR_4g063720 28.200 461 242 8 4 459 10 386 5.07e-51 189
MS.gene36291.t1 MTR_7g007000 27.470 415 263 7 4 401 10 403 1.63e-49 185
MS.gene36291.t1 MTR_1g041565 29.730 407 228 11 4 406 6 358 2.58e-45 172
MS.gene36291.t1 MTR_6g034005 29.620 395 257 7 74 465 2 378 3.81e-44 171
MS.gene36291.t1 MTR_4g092920 30.435 322 208 4 84 401 1 310 7.25e-44 167
MS.gene36291.t1 MTR_7g026080 33.755 237 154 3 4 238 10 245 7.79e-43 157
MS.gene36291.t1 MTR_2g031670 32.589 224 150 1 15 238 45 267 7.43e-36 139
MS.gene36291.t1 MTR_4g088515 33.200 250 146 4 4 251 277 507 1.02e-34 141
MS.gene36291.t1 MTR_6g033810 28.803 309 168 3 99 404 29 288 2.60e-34 133
MS.gene36291.t1 MTR_1207s0010 38.547 179 108 2 100 278 1 177 3.94e-34 129
MS.gene36291.t1 MTR_7g026180 40.000 120 72 0 68 187 21 140 1.32e-24 106
MS.gene36291.t1 MTR_5g097190 33.143 175 104 3 4 176 159 322 3.03e-24 105
MS.gene36291.t1 MTR_6g478100 28.311 219 142 3 30 248 10 213 6.44e-22 98.2
MS.gene36291.t1 MTR_1g016250 63.636 77 21 1 617 686 1 77 1.17e-20 87.4
MS.gene36291.t1 MTR_5g006180 23.438 448 300 12 4 438 30 447 3.00e-19 92.8
MS.gene36291.t1 MTR_4g107920 24.129 402 262 13 4 383 21 401 2.66e-18 89.7
MS.gene36291.t1 MTR_6g033910 28.365 208 97 3 68 273 21 178 3.18e-18 84.0
MS.gene36291.t1 MTR_4g115780 23.355 471 295 16 4 438 141 581 5.82e-17 85.9
MS.gene36291.t1 MTR_7g026050 28.824 170 118 3 238 404 1 170 3.68e-16 81.6
MS.gene36291.t1 MTR_5g090110 21.806 454 299 13 4 438 29 445 1.46e-13 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36291.t1 AT1G79930 75.235 852 181 4 1 850 1 824 0.0 1321
MS.gene36291.t1 AT1G79930 79.257 781 157 2 1 779 1 778 0.0 1292
MS.gene36291.t1 AT1G79920 80.155 645 123 2 1 643 1 642 0.0 1080
MS.gene36291.t1 AT1G79920 80.000 645 124 2 1 643 1 642 0.0 1058
MS.gene36291.t1 AT1G79920 80.000 645 124 2 1 643 1 642 0.0 1058
MS.gene36291.t1 AT1G79920 80.000 645 124 2 1 643 1 642 0.0 1058
MS.gene36291.t1 AT1G11660 49.189 801 347 9 1 796 1 746 0.0 761
MS.gene36291.t1 AT1G11660 49.189 801 347 9 1 796 1 746 0.0 761
MS.gene36291.t1 AT1G11660 49.189 801 347 9 1 796 1 746 0.0 761
MS.gene36291.t1 AT1G11660 47.775 764 339 9 38 796 1 709 0.0 697
MS.gene36291.t1 AT1G16030 33.192 473 297 6 4 471 9 467 7.79e-84 282
MS.gene36291.t1 AT5G02500 33.406 461 289 5 4 459 10 457 1.77e-83 281
MS.gene36291.t1 AT5G02500 36.412 379 239 2 4 381 10 387 7.16e-83 276
MS.gene36291.t1 AT3G12580 34.018 438 273 4 4 438 10 434 8.15e-82 276
MS.gene36291.t1 AT3G09440 33.333 471 295 6 4 469 10 466 1.09e-81 276
MS.gene36291.t1 AT3G09440 33.333 471 295 6 4 469 10 466 1.09e-81 276
MS.gene36291.t1 AT3G09440 33.333 471 295 6 4 469 10 466 1.09e-81 276
MS.gene36291.t1 AT3G09440 33.333 471 295 6 4 469 10 466 1.09e-81 276
MS.gene36291.t1 AT1G56410 34.663 401 258 3 4 401 10 409 2.34e-78 266
MS.gene36291.t1 AT5G02490 34.913 401 257 3 4 401 10 409 4.50e-78 266
MS.gene36291.t1 AT4G16660 25.956 863 572 23 2 823 25 861 1.24e-76 267
MS.gene36291.t1 AT4G16660 25.956 863 572 23 2 823 49 885 1.98e-76 267
MS.gene36291.t1 AT1G09080 32.829 463 289 6 2 459 41 486 1.09e-75 260
MS.gene36291.t1 AT1G09080 32.829 463 289 6 2 459 51 496 1.61e-75 260
MS.gene36291.t1 AT5G42020 31.681 464 294 7 2 459 36 482 6.89e-75 258
MS.gene36291.t1 AT5G42020 31.681 464 294 7 2 459 36 482 9.94e-75 256
MS.gene36291.t1 AT5G42020 31.681 464 294 7 2 459 41 487 1.52e-74 257
MS.gene36291.t1 AT5G28540 31.681 464 294 7 2 459 36 482 3.07e-74 256
MS.gene36291.t1 AT5G09590 33.168 404 253 7 3 401 59 450 6.23e-64 228
MS.gene36291.t1 AT4G37910 32.637 383 243 4 3 380 54 426 1.14e-61 221
MS.gene36291.t1 AT4G37910 32.637 383 243 4 3 380 54 426 1.14e-61 221
MS.gene36291.t1 AT5G49910 29.038 520 335 11 3 511 80 576 3.04e-55 204
MS.gene36291.t1 AT4G24280 31.377 443 272 9 3 438 80 497 1.32e-53 199
MS.gene36291.t1 AT2G32120 24.558 452 298 12 4 441 31 453 5.67e-20 95.1
MS.gene36291.t1 AT2G32120 24.558 452 298 12 4 441 31 453 5.67e-20 95.1

Find 206 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGAGTTGTTGGTGTTTC+TGG 0.041222 2.2:+1690267 None:intergenic
CTGGAACTCTCGTACTTTAA+AGG 0.133668 2.2:+1693253 None:intergenic
TCTGAACATCGAGTGCTTAA+TGG 0.188786 2.2:-1693555 MS.gene36291:CDS
CTTATATTCCTCCTTAAATT+TGG 0.191974 2.2:+1693670 None:intergenic
AGGACGGGGTTGGCAAATTT+TGG 0.198115 2.2:+1690502 None:intergenic
GGTGACAAACAACGGTTTAT+TGG 0.201798 2.2:-1694277 MS.gene36291:CDS
TCCTCCTGAGGTTGCTGTTC+TGG 0.221365 2.2:+1690216 None:intergenic
ATTGATTCATGCACGATATC+TGG 0.221555 2.2:-1694104 MS.gene36291:CDS
TTGCATTGCCGGATTTAAAA+AGG 0.228004 2.2:-1693777 MS.gene36291:CDS
AATGTCAATGTGATCAAATT+TGG 0.239845 2.2:+1690689 None:intergenic
GGCTTGGCCGGCTTCGGTTT+TGG 0.248203 2.2:+1690297 None:intergenic
CCTGTTGCAGAGGTAGTTTA+TGG 0.277865 2.2:-1691421 MS.gene36291:CDS
TTCACAGCTACTCAAGTCTT+TGG 0.281593 2.2:-1694067 MS.gene36291:CDS
ACAGCAACTGCCTTGGCTTA+TGG 0.283051 2.2:-1693878 MS.gene36291:CDS
AAAGTTCGTTTGAATCTTCA+TGG 0.286356 2.2:-1692208 MS.gene36291:CDS
AGCATGCAAGTTTGCATTGC+CGG 0.294577 2.2:-1693788 MS.gene36291:CDS
TCTCTTTCGTGGAAATCTTC+TGG 0.295965 2.2:-1692530 MS.gene36291:CDS
GTGACAAACAACGGTTTATT+GGG 0.297139 2.2:-1694276 MS.gene36291:CDS
TTCAAATCCCTCTGCAGTTC+CGG 0.301759 2.2:+1694169 None:intergenic
GGTCCTTCAGTGACATTAAA+AGG 0.302527 2.2:+1694139 None:intergenic
TCAGCAGATTCTTTGGTAAC+TGG 0.303908 2.2:+1691987 None:intergenic
TTTCGTCATGATCGGCTTAC+AGG 0.313727 2.2:+1690320 None:intergenic
TCAGACAAGCCCTGGCATTC+TGG 0.315813 2.2:+1693636 None:intergenic
ATTGACAGAGTTCTTCAAAA+AGG 0.324222 2.2:-1693351 MS.gene36291:CDS
TGAATTTATTACCAAACTTC+AGG 0.326359 2.2:-1691142 MS.gene36291:CDS
GATACCCCTGGGGCTGAAAA+TGG 0.326543 2.2:-1691858 MS.gene36291:CDS
CATATTAACATCGTTGTCAT+TGG 0.332496 2.2:+1691902 None:intergenic
TGTCTATGACATGAGAAATA+AGG 0.332501 2.2:-1691287 MS.gene36291:intron
GCAACTATCTCTTCCAATCT+TGG 0.333522 2.2:-1693489 MS.gene36291:CDS
ATCTTCCACCTCCTGAAGTT+TGG 0.336106 2.2:+1691131 None:intergenic
CTTGGCATTGTATACACCTT+TGG 0.340971 2.2:+1691080 None:intergenic
CCAGGGCTTGTCTGAGGTTG+AGG 0.342271 2.2:-1693628 MS.gene36291:CDS
GTAGCTGGCTTGGCCGGCTT+CGG 0.350876 2.2:+1690291 None:intergenic
TTGGATGCAGCCACTATTGC+AGG 0.354110 2.2:-1693932 MS.gene36291:CDS
ACCGATTACCTTCTGTTTCT+CGG 0.363019 2.2:+1690665 None:intergenic
CTTTAAAGTACGAGAGTTCC+AGG 0.363318 2.2:-1693252 MS.gene36291:intron
CCCTTCACACGCTCCAAGAT+TGG 0.367345 2.2:+1693476 None:intergenic
TCTTTATAGCGCTCTTCAAT+TGG 0.369111 2.2:+1690792 None:intergenic
CAACGGTTTATTGGGACTGC+TGG 0.381438 2.2:-1694268 MS.gene36291:CDS
TCACCAAAACACACAATTGC+TGG 0.381576 2.2:+1694295 None:intergenic
ATGTCAATGTGATCAAATTT+GGG 0.382316 2.2:+1690690 None:intergenic
TAGGTATGGGATTTCCCTTT+GGG 0.397756 2.2:+1692456 None:intergenic
CTAGGTATGGGATTTCCCTT+TGG 0.399508 2.2:+1692455 None:intergenic
AATTTATAAGACTGATCTTC+CGG 0.400012 2.2:-1693855 MS.gene36291:CDS
ATGGTTGAGGTGGTTGGTTC+CGG 0.401837 2.2:-1693401 MS.gene36291:CDS
GTTGGTGTTTCTGGAGTAGC+TGG 0.401844 2.2:+1690276 None:intergenic
CAATACCTTGGAACTAGGTA+TGG 0.403161 2.2:+1692442 None:intergenic
TCTGATTTGTCAGTCTCCAT+TGG 0.404976 2.2:+1690126 None:intergenic
GCTGTTGTTGATTGCTGCAT+TGG 0.405028 2.2:-1693995 MS.gene36291:CDS
TTATTGTCTGATTCGCTGTC+TGG 0.407773 2.2:+1692497 None:intergenic
TCCTGAGGAGGTGGAGTTGT+TGG 0.408657 2.2:+1690258 None:intergenic
TAAATTTGGCAGCAAAATGA+TGG 0.412474 2.2:+1693684 None:intergenic
TCACAGCTACTCAAGTCTTT+GGG 0.416881 2.2:-1694066 MS.gene36291:CDS
CCATTCGTACGATAGGTCCC+TGG 0.429701 2.2:-1693735 MS.gene36291:CDS
ACTCCAGCAATTGTGTGTTT+TGG 0.432697 2.2:-1694298 MS.gene36291:CDS
GGTGGTGCAGCAGCATCAGC+AGG 0.435571 2.2:+1691933 None:intergenic
AACGGTTTATTGGGACTGCT+GGG 0.440788 2.2:-1694267 MS.gene36291:CDS
GATAGCTGGTACACGAGAAC+CGG 0.449422 2.2:+1693382 None:intergenic
GGAGCGTGTGAAGGGACCTT+TGG 0.450308 2.2:-1693468 MS.gene36291:CDS
AATCAAGTCCCACCAGTCTC+TGG 0.450550 2.2:-1690153 MS.gene36291:CDS
CAGGGCTTGTCTGAGGTTGA+GGG 0.453127 2.2:-1693627 MS.gene36291:CDS
TCCATTGGTTCGCCAGAGAC+TGG 0.454103 2.2:+1690141 None:intergenic
GTATTGACATTCTTCAGAAC+AGG 0.459419 2.2:-1692425 MS.gene36291:CDS
CAAGCTGGAAGAGCTCAAAA+AGG 0.461479 2.2:-1691061 MS.gene36291:intron
TGCTGAAGAAAATGCTAAGA+TGG 0.464324 2.2:-1691970 MS.gene36291:CDS
TCCAATCTTGGAGCGTGTGA+AGG 0.464412 2.2:-1693477 MS.gene36291:CDS
AATGTTGCCTTCGTTGATGT+TGG 0.464859 2.2:-1693818 MS.gene36291:CDS
ACCAACAACTCCACCTCCTC+AGG 0.467608 2.2:-1690259 MS.gene36291:CDS
CCATAAACTACCTCTGCAAC+AGG 0.467626 2.2:+1691421 None:intergenic
ATGTTGCCTTCGTTGATGTT+GGG 0.468175 2.2:-1693817 MS.gene36291:CDS
TTGATGTTTACCAGAATGCC+AGG 0.468308 2.2:-1693646 MS.gene36291:CDS
TCTTCAGAGGAGATCTGTAT+TGG 0.468618 2.2:-1693951 MS.gene36291:CDS
AACTTCAGGAGGTGGAAGAT+TGG 0.469887 2.2:-1691128 MS.gene36291:CDS
TCGCAGATAAAGAGATTGAT+TGG 0.470501 2.2:-1694208 MS.gene36291:CDS
AGGAGATAAGCCTGTGCAAA+TGG 0.471804 2.2:-1691823 MS.gene36291:CDS
TGCTCACCTTCCTGAGGAGG+TGG 0.475053 2.2:+1690249 None:intergenic
ACACTGCAATGCAGCACCCC+TGG 0.479004 2.2:+1693292 None:intergenic
CACGAAAGAGAAACTGAAAA+GGG 0.481256 2.2:+1692542 None:intergenic
CCACGAAAGAGAAACTGAAA+AGG 0.483023 2.2:+1692541 None:intergenic
CTGATCTTCCGGAAAATGAA+TGG 0.484443 2.2:-1693844 MS.gene36291:CDS
TGAAGATCGGTAAAGTAGAC+TGG 0.487938 2.2:+1693968 None:intergenic
CGAGACAACAGCAACTGCCT+TGG 0.492233 2.2:-1693885 MS.gene36291:CDS
ACGATAGGTCCCTGGGTGGT+AGG 0.492416 2.2:-1693727 MS.gene36291:CDS
CCCTGCATTGTCATTACTAC+CGG 0.496598 2.2:+1690185 None:intergenic
TCGATGTTCAGAGGTACCTC+TGG 0.499197 2.2:+1693566 None:intergenic
GTATCTGTATCCATTTGCAC+AGG 0.502980 2.2:+1691813 None:intergenic
TCTGGAGTAGCTGGCTTGGC+CGG 0.504054 2.2:+1690285 None:intergenic
TTGATTCATGCACGATATCT+GGG 0.504774 2.2:-1694103 MS.gene36291:CDS
AATGTGTAGAAGCTGAGAAT+TGG 0.505212 2.2:-1690558 MS.gene36291:CDS
ACCAGTCTCTGGCGAACCAA+TGG 0.505944 2.2:-1690142 MS.gene36291:CDS
GAAAATGGCATGCCTGAGGC+AGG 0.507943 2.2:-1691843 MS.gene36291:CDS
CTGAAGCAACGACAAACTCT+TGG 0.510316 2.2:+1691172 None:intergenic
TCTGCAAGTGCCTTCTCCAA+AGG 0.510923 2.2:+1693452 None:intergenic
CGATAGGTCCCTGGGTGGTA+GGG 0.511133 2.2:-1693726 MS.gene36291:CDS
ATCCACATGGTTGAGGTGGT+TGG 0.513899 2.2:-1693407 MS.gene36291:CDS
GAGAAGGCACTTGCAGAAGC+AGG 0.514343 2.2:-1693446 MS.gene36291:CDS
GACGAAACCAAAACCGAAGC+CGG 0.516011 2.2:-1690304 MS.gene36291:CDS
TGTTTCTGGAGTAGCTGGCT+TGG 0.519497 2.2:+1690281 None:intergenic
AACTCTCGTACTTTAAAGGT+TGG 0.520643 2.2:+1693257 None:intergenic
TGCTGATCCGGAACTGCAGA+GGG 0.522518 2.2:-1694176 MS.gene36291:CDS
TGTAGAGAAGGAGTTTGAAA+TGG 0.522603 2.2:-1691368 MS.gene36291:CDS
ATATCAGCTGACAAGAGGAC+GGG 0.523481 2.2:+1690487 None:intergenic
AAGGTAACTGCTGATACCCC+TGG 0.526128 2.2:-1691870 MS.gene36291:CDS
GCTATAAAGAGTACTCAGAC+AGG 0.526304 2.2:-1690779 MS.gene36291:CDS
AGGTGTATACAATGCCAAGC+TGG 0.526816 2.2:-1691076 MS.gene36291:CDS
AGATATCGTGCATGAATCAA+TGG 0.527139 2.2:+1694106 None:intergenic
ACAGGCTTATCTCCTGCCTC+AGG 0.527960 2.2:+1691831 None:intergenic
GCTGCATTGTTGCCGTTGCA+AGG 0.528572 2.2:-1694366 MS.gene36291:CDS
CCTCAACCTCAGACAAGCCC+TGG 0.529406 2.2:+1693628 None:intergenic
TGAATCAATGGATATCCATC+AGG 0.529513 2.2:+1694118 None:intergenic
ACAACCAGAACAGCAACCTC+AGG 0.530164 2.2:-1690220 MS.gene36291:CDS
TATTACCAAACTTCAGGAGG+TGG 0.534898 2.2:-1691136 MS.gene36291:CDS
TTGCCGTTGCAAGGCAGAGA+GGG 0.535504 2.2:-1694357 MS.gene36291:CDS
CAGGGACCTATCGTACGAAT+GGG 0.536830 2.2:+1693736 None:intergenic
GCCGGTAGTAATGACAATGC+AGG 0.537493 2.2:-1690186 MS.gene36291:CDS
TGAGAATATCCACATGGTTG+AGG 0.538524 2.2:-1693414 MS.gene36291:CDS
TTCTTATATCAGCTGACAAG+AGG 0.539505 2.2:+1690482 None:intergenic
ACTTGCAGAAGCAGGTCTTA+CGG 0.542448 2.2:-1693438 MS.gene36291:CDS
ATGCTAGCGAGTGTGTTGCC+AGG 0.542997 2.2:-1693310 MS.gene36291:CDS
TGCTGCTCACCTTCCTGAGG+AGG 0.545333 2.2:+1690246 None:intergenic
AATGTCAATACCTTGGAACT+AGG 0.546679 2.2:+1692437 None:intergenic
TGTTCAGAAGGCTGTAGAGA+AGG 0.546797 2.2:-1691380 MS.gene36291:CDS
ACATCGTTGTCATTGGAGCT+AGG 0.547123 2.2:+1691909 None:intergenic
TGTTAATATGCAAGATGCTA+AGG 0.547914 2.2:-1691889 MS.gene36291:CDS
TTGTCATTGGAGCTAGGAGG+TGG 0.548536 2.2:+1691915 None:intergenic
TGCTAGCGAGTGTGTTGCCA+GGG 0.549345 2.2:-1693309 MS.gene36291:CDS
CCAGGGACCTATCGTACGAA+TGG 0.550358 2.2:+1693735 None:intergenic
ACATTGTACATCAACAGAAA+AGG 0.552110 2.2:+1692400 None:intergenic
CGGGTGCAAACCTGCAATAG+TGG 0.553198 2.2:+1693922 None:intergenic
TGCTTGTGAGAAGCTGAAGA+AGG 0.553233 2.2:-1693603 MS.gene36291:CDS
CCGGTAGTAATGACAATGCA+GGG 0.554344 2.2:-1690185 MS.gene36291:CDS
TACCTCTGCAACAGGAATGT+TGG 0.554739 2.2:+1691429 None:intergenic
CGAGTGCTTAATGGATGAGA+AGG 0.556611 2.2:-1693546 MS.gene36291:CDS
AATTGCTGGAGTTTCACGCT+TGG 0.556631 2.2:+1694309 None:intergenic
GTCAAAATCCCTACCACCCA+GGG 0.558316 2.2:+1693718 None:intergenic
TACAGATCTCCTCTGAAGAT+CGG 0.558868 2.2:+1693955 None:intergenic
ATTGGTTCGCCAGAGACTGG+TGG 0.559164 2.2:+1690144 None:intergenic
CATTCGTACGATAGGTCCCT+GGG 0.559216 2.2:-1693734 MS.gene36291:CDS
CCAATCTTGGAGCGTGTGAA+GGG 0.559917 2.2:-1693476 MS.gene36291:CDS
AGGTAACTGCTGATACCCCT+GGG 0.561414 2.2:-1691869 MS.gene36291:CDS
TCTCGTGAATCAAGTGAAGC+GGG 0.567955 2.2:+1693903 None:intergenic
AATGTCACTGAAGGACCTGA+TGG 0.568196 2.2:-1694133 MS.gene36291:CDS
TCTGAAGAATGTCAATACCT+TGG 0.568276 2.2:+1692430 None:intergenic
AATGGATGAGAAGGATGTGA+GGG 0.568291 2.2:-1693537 MS.gene36291:CDS
TGGAATTGTGTCTGTTGAGT+CGG 0.568343 2.2:-1692188 MS.gene36291:CDS
AGCTGACAAGAGGACGGGGT+TGG 0.571644 2.2:+1690492 None:intergenic
GTTTGTCGTTGCTTCAGAGA+GGG 0.575619 2.2:-1691166 MS.gene36291:CDS
CGTCAAAATCCCTACCACCC+AGG 0.577960 2.2:+1693717 None:intergenic
CTAGCATTCATAGTCCGCCT+AGG 0.579676 2.2:+1693326 None:intergenic
TGCTGCTGCTCACCTTCCTG+AGG 0.582832 2.2:+1690243 None:intergenic
AATGACAATGCAGGGGACAA+TGG 0.583306 2.2:-1690177 MS.gene36291:CDS
AGAGGTAGTTTATGGTGCAA+TGG 0.587607 2.2:-1691413 MS.gene36291:CDS
CCTCAGGAGGATGCTAATGC+CGG 0.588845 2.2:-1690204 MS.gene36291:CDS
CTTATAAATTCCATAAGCCA+AGG 0.590353 2.2:+1693868 None:intergenic
TACTGTCCCATTCGTACGAT+AGG 0.595664 2.2:-1693742 MS.gene36291:CDS
AATACCTTGGAACTAGGTAT+GGG 0.596855 2.2:+1692443 None:intergenic
AAATCCCATACCTAGTTCCA+AGG 0.597545 2.2:-1692447 MS.gene36291:CDS
TATAAAGAGTACTCAGACAG+GGG 0.597749 2.2:-1690777 MS.gene36291:CDS
CTATAAAGAGTACTCAGACA+GGG 0.603983 2.2:-1690778 MS.gene36291:CDS
TTGGTTCGCCAGAGACTGGT+GGG 0.606360 2.2:+1690145 None:intergenic
ATGGATGAGAAGGATGTGAG+GGG 0.606368 2.2:-1693536 MS.gene36291:CDS
TTGCTGATCCGGAACTGCAG+AGG 0.608780 2.2:-1694177 MS.gene36291:CDS
ACGGTTTATTGGGACTGCTG+GGG 0.609490 2.2:-1694266 MS.gene36291:CDS
TATATCAGCTGACAAGAGGA+CGG 0.612018 2.2:+1690486 None:intergenic
GGCTCTGCAAGATCGAGTGA+TGG 0.612553 2.2:-1691347 MS.gene36291:CDS
CAACCAAAGATGAGTGTGGT+CGG 0.612927 2.2:-1694409 None:intergenic
GACCAACATTCCTGTTGCAG+AGG 0.615018 2.2:-1691431 MS.gene36291:CDS
TGTGAAGGGACCTTTGGAGA+AGG 0.615609 2.2:-1693462 MS.gene36291:CDS
TCTACTTTACCGATCTTCAG+AGG 0.615790 2.2:-1693964 MS.gene36291:CDS
ATTTATTACCAAACTTCAGG+AGG 0.618570 2.2:-1691139 MS.gene36291:CDS
TCTGCAAGATCGAGTGATGG+AGG 0.622778 2.2:-1691344 MS.gene36291:CDS
GGCAACTGTTGATGTTCAGA+AGG 0.624402 2.2:-1691392 MS.gene36291:CDS
ATTTCCCTTTGGGAAAACAA+TGG 0.628075 2.2:+1692466 None:intergenic
ACCAGAACAGCAACCTCAGG+AGG 0.628863 2.2:-1690217 MS.gene36291:CDS
CTTTGAAGAGGAAGAAACTG+AGG 0.629490 2.2:-1692012 MS.gene36291:CDS
GAAGATTGGCTATACGAGGA+TGG 0.629632 2.2:-1691114 MS.gene36291:CDS
GTCTCGTGAATCAAGTGAAG+CGG 0.632195 2.2:+1693902 None:intergenic
ATTAAGCACTCGATGTTCAG+AGG 0.636214 2.2:+1693557 None:intergenic
AGAATGCCAGGGCTTGTCTG+AGG 0.639873 2.2:-1693634 MS.gene36291:CDS
ACAACTCCACCTCCTCAGGA+AGG 0.644838 2.2:-1690255 MS.gene36291:CDS
GGCTGAAAATGGCATGCCTG+AGG 0.650058 2.2:-1691847 MS.gene36291:CDS
AATCCCTCTCTGCCTTGCAA+CGG 0.651598 2.2:+1694354 None:intergenic
AACCAACCACCTCAACCATG+TGG 0.653097 2.2:+1693405 None:intergenic
TATCAGCTGACAAGAGGACG+GGG 0.657591 2.2:+1690488 None:intergenic
TGACATTGCCGAGAAACAGA+AGG 0.657830 2.2:-1690673 MS.gene36291:intron
AGCATGCCCAACATCAACGA+AGG 0.660529 2.2:+1693811 None:intergenic
GTTGCCGTTGCAAGGCAGAG+AGG 0.665250 2.2:-1694358 MS.gene36291:CDS
TGATGTTTACCAGAATGCCA+GGG 0.666077 2.2:-1693645 MS.gene36291:CDS
TAATGGATGAGAAGGATGTG+AGG 0.670561 2.2:-1693538 MS.gene36291:CDS
AGTTTGTCGTTGCTTCAGAG+AGG 0.671949 2.2:-1691167 MS.gene36291:CDS
ACGAAAGAGAAACTGAAAAG+GGG 0.674521 2.2:+1692543 None:intergenic
GAATATCCACATGGTTGAGG+TGG 0.679068 2.2:-1693411 MS.gene36291:CDS
GCAAATGGATACAGATACCA+AGG 0.680089 2.2:-1691808 MS.gene36291:intron
CCGGCATTAGCATCCTCCTG+AGG 0.684481 2.2:+1690204 None:intergenic
TACGGTTGAGAATATCCACA+TGG 0.684683 2.2:-1693420 MS.gene36291:CDS
TCGTTGTCATTGGAGCTAGG+AGG 0.689793 2.2:+1691912 None:intergenic
CGGTAGTAATGACAATGCAG+GGG 0.692208 2.2:-1690184 MS.gene36291:CDS
GGTGGAAGATTGGCTATACG+AGG 0.701809 2.2:-1691118 MS.gene36291:CDS
GATGGTGAAGACGAAACCAA+AGG 0.702732 2.2:-1691096 MS.gene36291:CDS
AGATCAACCAAAGATGAGTG+TGG 0.702981 2.2:-1694413 None:intergenic
GGTCCTCAGTGCAAATCCAG+AGG 0.704785 2.2:-1693582 MS.gene36291:CDS
ACTGACAAATCAGAGAACAC+AGG 0.711435 2.2:-1690117 MS.gene36291:CDS
GCTAGCGAGTGTGTTGCCAG+GGG 0.718198 2.2:-1693308 MS.gene36291:CDS
TCGTACGATAGGTCCCTGGG+TGG 0.718316 2.2:-1693731 MS.gene36291:CDS
GTACCTCTGGATTTGCACTG+AGG 0.737553 2.2:+1693579 None:intergenic
GGTAACTGCTGATACCCCTG+GGG 0.770509 2.2:-1691868 MS.gene36291:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAGAAAAAATAATACTA+CGG + chr2.2:1691536-1691555 None:intergenic 10.0%
!!! ATATGTTTTGTATTTTTTTT+TGG - chr2.2:1691326-1691345 MS.gene36291:CDS 10.0%
!!! ATTTTGAAACAATTTTTTTT+TGG + chr2.2:1691431-1691450 None:intergenic 10.0%
!!! GTTTTCTATTTAAATTTTTT+AGG - chr2.2:1693917-1693936 MS.gene36291:CDS 10.0%
!! TCAATTTGTAAATATAACAA+GGG + chr2.2:1691794-1691813 None:intergenic 15.0%
!! TGTATATAGTATTAATTGAA+GGG + chr2.2:1691506-1691525 None:intergenic 15.0%
!!! TAATTTTCTTATTTCTATTG+TGG - chr2.2:1692832-1692851 MS.gene36291:intron 15.0%
!!! TTTTTTTATAATTGTAGCAA+GGG - chr2.2:1693689-1693708 MS.gene36291:CDS 15.0%
!!! TTTTTTTTATAATTGTAGCA+AGG - chr2.2:1693688-1693707 MS.gene36291:CDS 15.0%
!! AAATTATCCTAATCAACTAT+TGG + chr2.2:1691570-1691589 None:intergenic 20.0%
!! AATAGTTGATTAGGATAATT+TGG - chr2.2:1691569-1691588 MS.gene36291:intron 20.0%
!! CTAATTATGTTATCTACAAT+AGG - chr2.2:1694163-1694182 MS.gene36291:CDS 20.0%
!! GTCAATTTGTAAATATAACA+AGG + chr2.2:1691795-1691814 None:intergenic 20.0%
!! GTGTATATAGTATTAATTGA+AGG + chr2.2:1691507-1691526 None:intergenic 20.0%
!! TACAAATAGAAATATTGCAT+TGG + chr2.2:1691732-1691751 None:intergenic 20.0%
!!! AATAAATTGTCCATTTTTTG+CGG - chr2.2:1691851-1691870 MS.gene36291:CDS 20.0%
!!! TTTACAATATTTTTCCCTAT+TGG - chr2.2:1692200-1692219 MS.gene36291:CDS 20.0%
!!! TTTTCAGACAAACTTATATT+TGG - chr2.2:1692881-1692900 MS.gene36291:intron 20.0%
!!! TTTTTCTTGTTTCTTTCAAA+TGG - chr2.2:1693258-1693277 MS.gene36291:CDS 20.0%
!!! TTTTTTATAATTGTAGCAAG+GGG - chr2.2:1693690-1693709 MS.gene36291:CDS 20.0%
! AAACAAACCAATAGTTGATT+AGG - chr2.2:1691560-1691579 MS.gene36291:intron 25.0%
! AATGTCAATGTGATCAAATT+TGG + chr2.2:1693821-1693840 None:intergenic 25.0%
! AATTTATAAGACTGATCTTC+CGG - chr2.2:1690652-1690671 MS.gene36291:intron 25.0%
! AGAAATATTGCATTGGAAAA+TGG + chr2.2:1691725-1691744 None:intergenic 25.0%
! ATGTCAATGTGATCAAATTT+GGG + chr2.2:1693820-1693839 None:intergenic 25.0%
! CTTATATTCCTCCTTAAATT+TGG + chr2.2:1690840-1690859 None:intergenic 25.0%
! GTGATTTATAAAGTTCTTGT+TGG - chr2.2:1692950-1692969 MS.gene36291:intron 25.0%
! TAACAATTCTCTGCAAAAAA+TGG + chr2.2:1691817-1691836 None:intergenic 25.0%
! TAACACTTCTAATTCATTTC+TGG - chr2.2:1693874-1693893 MS.gene36291:CDS 25.0%
! TGAATTTATTACCAAACTTC+AGG - chr2.2:1693365-1693384 MS.gene36291:CDS 25.0%
! TGATATAAGAAAAAAAGCTG+AGG - chr2.2:1694037-1694056 MS.gene36291:CDS 25.0%
! TTGTTTACTTCATTATGAGA+AGG - chr2.2:1691928-1691947 MS.gene36291:CDS 25.0%
!! AACACTTTTCAAAATGACTA+GGG - chr2.2:1693564-1693583 MS.gene36291:CDS 25.0%
!! AGTAAGTTTTTGTATGCTTA+GGG - chr2.2:1692346-1692365 MS.gene36291:intron 25.0%
!! TTCAAAATGAATGTCGTTTA+AGG + chr2.2:1691651-1691670 None:intergenic 25.0%
!!! AAACGACACTCATTTTAAAA+CGG + chr2.2:1691405-1691424 None:intergenic 25.0%
!!! AAACGACATTCATTTTGAAA+CGG - chr2.2:1691652-1691671 MS.gene36291:intron 25.0%
!!! TGAATTAGAAGTGTTAGTAT+TGG + chr2.2:1693870-1693889 None:intergenic 25.0%
!!! TTTCTTATTTCTATTGTGGA+AGG - chr2.2:1692836-1692855 MS.gene36291:intron 25.0%
AAAGTTCGTTTGAATCTTCA+TGG - chr2.2:1692299-1692318 MS.gene36291:intron 30.0%
ACATTGTACATCAACAGAAA+AGG + chr2.2:1692110-1692129 None:intergenic 30.0%
ATGACATGAGAAATAAGGTT+AGG - chr2.2:1693225-1693244 MS.gene36291:intron 30.0%
ATTGACAGAGTTCTTCAAAA+AGG - chr2.2:1691156-1691175 MS.gene36291:CDS 30.0%
ATTTATTACCAAACTTCAGG+AGG - chr2.2:1693368-1693387 MS.gene36291:CDS 30.0%
CATATTAACATCGTTGTCAT+TGG + chr2.2:1692608-1692627 None:intergenic 30.0%
CTTATAAATTCCATAAGCCA+AGG + chr2.2:1690642-1690661 None:intergenic 30.0%
TAAATTTGGCAGCAAAATGA+TGG + chr2.2:1690826-1690845 None:intergenic 30.0%
TACAGCATAGAAAATTTACC+TGG + chr2.2:1691276-1691295 None:intergenic 30.0%
TCTTCTTAACCAATGTCATA+AGG - chr2.2:1691752-1691771 MS.gene36291:intron 30.0%
TGCAAAAACTATAACTACAG+TGG + chr2.2:1693648-1693667 None:intergenic 30.0%
TGTCTATGACATGAGAAATA+AGG - chr2.2:1693220-1693239 MS.gene36291:intron 30.0%
TGTTAATATGCAAGATGCTA+AGG - chr2.2:1692618-1692637 MS.gene36291:intron 30.0%
TTACCACAATGATTTCACAT+GGG + chr2.2:1692419-1692438 None:intergenic 30.0%
TTTACCACAATGATTTCACA+TGG + chr2.2:1692420-1692439 None:intergenic 30.0%
! ACACTTTTCAAAATGACTAG+GGG - chr2.2:1693565-1693584 MS.gene36291:CDS 30.0%
! ACCAGTATGTTCTGTATTTT+TGG - chr2.2:1691302-1691321 MS.gene36291:CDS 30.0%
! AGGTATATGTTGTAGCTTTA+TGG - chr2.2:1694068-1694087 MS.gene36291:CDS 30.0%
! ATCTGCGAGATTGAATTTTT+CGG + chr2.2:1690287-1690306 None:intergenic 30.0%
! ATTTTCTTCAGCAGATTCTT+TGG + chr2.2:1692530-1692549 None:intergenic 30.0%
! CAACACTTTTCAAAATGACT+AGG - chr2.2:1693563-1693582 MS.gene36291:CDS 30.0%
! CAGTAAGTTTTTGTATGCTT+AGG - chr2.2:1692345-1692364 MS.gene36291:intron 30.0%
! TCATTTTGCTGCCAAATTTA+AGG - chr2.2:1690826-1690845 MS.gene36291:intron 30.0%
!! AAAGTGTTGATAGCTATCAA+AGG + chr2.2:1693552-1693571 None:intergenic 30.0%
!! TGGTAAAAAATTTGCTGATC+CGG - chr2.2:1690319-1690338 MS.gene36291:CDS 30.0%
!! TTTTGTTAAGCTCTTTGAAG+AGG - chr2.2:1692483-1692502 MS.gene36291:CDS 30.0%
!!! GTCAATATTTTGTTGATAGC+TGG + chr2.2:1691142-1691161 None:intergenic 30.0%
!!! GTCTTCTTCACTTTTTTCTT+TGG + chr2.2:1693059-1693078 None:intergenic 30.0%
AATACCTTGGAACTAGGTAT+GGG + chr2.2:1692067-1692086 None:intergenic 35.0%
AATGTCAATACCTTGGAACT+AGG + chr2.2:1692073-1692092 None:intergenic 35.0%
AATGTGTAGAAGCTGAGAAT+TGG - chr2.2:1693949-1693968 MS.gene36291:CDS 35.0%
ACGAAAGAGAAACTGAAAAG+GGG + chr2.2:1691967-1691986 None:intergenic 35.0%
AGACAAGAAAAATGCAGTTG+AGG - chr2.2:1693193-1693212 MS.gene36291:intron 35.0%
AGATATCGTGCATGAATCAA+TGG + chr2.2:1690404-1690423 None:intergenic 35.0%
AGCTCAGAAAAATCTGAATG+CGG - chr2.2:1690490-1690509 MS.gene36291:CDS 35.0%
AGTTCTTCAAAAAGGAACCT+AGG - chr2.2:1691164-1691183 MS.gene36291:CDS 35.0%
ATGGGCGTAATTAGAAAAGA+AGG + chr2.2:1692401-1692420 None:intergenic 35.0%
CAAACTAAAAACGGTGACAA+GGG - chr2.2:1692263-1692282 MS.gene36291:intron 35.0%
CAATTCAATAACAAACGCTC+TGG + chr2.2:1692445-1692464 None:intergenic 35.0%
CACGAAAGAGAAACTGAAAA+GGG + chr2.2:1691968-1691987 None:intergenic 35.0%
CTGGTATAAAAAAGTCTCGA+TGG - chr2.2:1693505-1693524 MS.gene36291:CDS 35.0%
GCCAAAAATACAGAACATAC+TGG + chr2.2:1691306-1691325 None:intergenic 35.0%
GTATAAAAAAGTCTCGATGG+TGG - chr2.2:1693508-1693527 MS.gene36291:CDS 35.0%
GTGACAAACAACGGTTTATT+GGG - chr2.2:1690231-1690250 MS.gene36291:CDS 35.0%
GTGTAACAAGCAATATGTGA+AGG - chr2.2:1693621-1693640 MS.gene36291:CDS 35.0%
TATTTGAGCACACATTGAAG+TGG + chr2.2:1692773-1692792 None:intergenic 35.0%
TCGCAGATAAAGAGATTGAT+TGG - chr2.2:1690299-1690318 MS.gene36291:CDS 35.0%
TCTGAAGAATGTCAATACCT+TGG + chr2.2:1692080-1692099 None:intergenic 35.0%
TCTTTACTCTTTAGCTGAAC+TGG - chr2.2:1693486-1693505 MS.gene36291:CDS 35.0%
TCTTTATAGCGCTCTTCAAT+TGG + chr2.2:1693718-1693737 None:intergenic 35.0%
TGAATCAATGGATATCCATC+AGG + chr2.2:1690392-1690411 None:intergenic 35.0%
TGCATTGCCGGATTTAAAAA+GGG - chr2.2:1690731-1690750 MS.gene36291:CDS 35.0%
TGCTGAAGAAAATGCTAAGA+TGG - chr2.2:1692537-1692556 MS.gene36291:CDS 35.0%
TGTAGAGAAGGAGTTTGAAA+TGG - chr2.2:1693139-1693158 MS.gene36291:intron 35.0%
TTATGCATCAATAAGCTCTC+TGG - chr2.2:1692976-1692995 MS.gene36291:intron 35.0%
TTCTTATATCAGCTGACAAG+AGG + chr2.2:1694028-1694047 None:intergenic 35.0%
TTGATTCATGCACGATATCT+GGG - chr2.2:1690404-1690423 MS.gene36291:intron 35.0%
TTGCATTGCCGGATTTAAAA+AGG - chr2.2:1690730-1690749 MS.gene36291:CDS 35.0%
! AACTCTCGTACTTTAAAGGT+TGG + chr2.2:1691253-1691272 None:intergenic 35.0%
! AAGTACCATTGTTTTCCCAA+AGG - chr2.2:1692036-1692055 MS.gene36291:intron 35.0%
! ACATTCAGCCATTCATTTTC+CGG + chr2.2:1690674-1690693 None:intergenic 35.0%
! AGTACCATTGTTTTCCCAAA+GGG - chr2.2:1692037-1692056 MS.gene36291:intron 35.0%
! ATTGATTCATGCACGATATC+TGG - chr2.2:1690403-1690422 MS.gene36291:intron 35.0%
! ATTTCCCTTTGGGAAAACAA+TGG + chr2.2:1692044-1692063 None:intergenic 35.0%
! GCACACAAAAATGTTTTCCT+TGG + chr2.2:1692731-1692750 None:intergenic 35.0%
! GTATTGACATTCTTCAGAAC+AGG - chr2.2:1692082-1692101 MS.gene36291:intron 35.0%
! TTGCCTTTTAATGTCACTGA+AGG - chr2.2:1690365-1690384 MS.gene36291:intron 35.0%
! TTTTGCTGCCAAATTTAAGG+AGG - chr2.2:1690829-1690848 MS.gene36291:intron 35.0%
!! AAAGAGTGTCCTTATGACAT+TGG + chr2.2:1691764-1691783 None:intergenic 35.0%
!! CTATAAAGAGTACTCAGACA+GGG - chr2.2:1693729-1693748 MS.gene36291:CDS 35.0%
!! TATAAAGAGTACTCAGACAG+GGG - chr2.2:1693730-1693749 MS.gene36291:CDS 35.0%
!!! CACCGTTTTTAGTTTGGAAA+GGG + chr2.2:1692259-1692278 None:intergenic 35.0%
!!! GACACTCATTTTAAAACGGA+GGG + chr2.2:1691401-1691420 None:intergenic 35.0%
!!! GACATTCATTTTGAAACGGA+GGG - chr2.2:1691656-1691675 MS.gene36291:intron 35.0%
!!! GTATATGTGCTGATTTTCGT+AGG + chr2.2:1692151-1692170 None:intergenic 35.0%
!!! TCACCGTTTTTAGTTTGGAA+AGG + chr2.2:1692260-1692279 None:intergenic 35.0%
!!! TGTGTTTTGGTGACAAACAA+CGG - chr2.2:1690222-1690241 MS.gene36291:CDS 35.0%
AAATCCCATACCTAGTTCCA+AGG - chr2.2:1692060-1692079 MS.gene36291:intron 40.0%
AATGGATGAGAAGGATGTGA+GGG - chr2.2:1690970-1690989 MS.gene36291:intron 40.0%
AATGTTGCCTTCGTTGATGT+TGG - chr2.2:1690689-1690708 MS.gene36291:CDS 40.0%
ACTCTTGCATTTGTGCAGAT+TGG - chr2.2:1692233-1692252 MS.gene36291:CDS 40.0%
ACTGACAAATCAGAGAACAC+AGG - chr2.2:1694390-1694409 MS.gene36291:CDS 40.0%
AGAGGTAGTTTATGGTGCAA+TGG - chr2.2:1693094-1693113 MS.gene36291:intron 40.0%
AGAGTCAAAAGACTGCCAAT+AGG + chr2.2:1692218-1692237 None:intergenic 40.0%
AGATACCAAGGTACATTCCA+AGG - chr2.2:1692711-1692730 MS.gene36291:intron 40.0%
ATGCAACTCTCCGCAAAAAA+TGG + chr2.2:1691864-1691883 None:intergenic 40.0%
ATGTTGCCTTCGTTGATGTT+GGG - chr2.2:1690690-1690709 MS.gene36291:CDS 40.0%
ATTAAGCACTCGATGTTCAG+AGG + chr2.2:1690953-1690972 None:intergenic 40.0%
CAATACCTTGGAACTAGGTA+TGG + chr2.2:1692068-1692087 None:intergenic 40.0%
CCAAACTAAAAACGGTGACA+AGG - chr2.2:1692262-1692281 MS.gene36291:intron 40.0%
CCACGAAAGAGAAACTGAAA+AGG + chr2.2:1691969-1691988 None:intergenic 40.0%
CTGATCTTCCGGAAAATGAA+TGG - chr2.2:1690663-1690682 MS.gene36291:intron 40.0%
CTGGAACTCTCGTACTTTAA+AGG + chr2.2:1691257-1691276 None:intergenic 40.0%
CTTGGCATTGTATACACCTT+TGG + chr2.2:1693430-1693449 None:intergenic 40.0%
GAGTCAAAAGACTGCCAATA+GGG + chr2.2:1692217-1692236 None:intergenic 40.0%
GCAAATGGATACAGATACCA+AGG - chr2.2:1692699-1692718 MS.gene36291:intron 40.0%
GCAACTATCTCTTCCAATCT+TGG - chr2.2:1691018-1691037 MS.gene36291:intron 40.0%
GCATTGCCGGATTTAAAAAG+GGG - chr2.2:1690732-1690751 MS.gene36291:CDS 40.0%
GGCCCTTTCCAAACTAAAAA+CGG - chr2.2:1692254-1692273 MS.gene36291:CDS 40.0%
GGCGTAATTAGAAAAGAAGG+AGG + chr2.2:1692398-1692417 None:intergenic 40.0%
GGTCCTTCAGTGACATTAAA+AGG + chr2.2:1690371-1690390 None:intergenic 40.0%
GGTGACAAACAACGGTTTAT+TGG - chr2.2:1690230-1690249 MS.gene36291:CDS 40.0%
GTATCTGTATCCATTTGCAC+AGG + chr2.2:1692697-1692716 None:intergenic 40.0%
TAAAAACGGTGACAAGGGAA+AGG - chr2.2:1692268-1692287 MS.gene36291:intron 40.0%
TACGGTTGAGAATATCCACA+TGG - chr2.2:1691087-1691106 MS.gene36291:CDS 40.0%
TAGGTATGGGATTTCCCTTT+GGG + chr2.2:1692054-1692073 None:intergenic 40.0%
TATATCAGCTGACAAGAGGA+CGG + chr2.2:1694024-1694043 None:intergenic 40.0%
TATTACCAAACTTCAGGAGG+TGG - chr2.2:1693371-1693390 MS.gene36291:CDS 40.0%
TCACAGCTACTCAAGTCTTT+GGG - chr2.2:1690441-1690460 MS.gene36291:intron 40.0%
TCACCAAAACACACAATTGC+TGG + chr2.2:1690215-1690234 None:intergenic 40.0%
TCTACTTTACCGATCTTCAG+AGG - chr2.2:1690543-1690562 MS.gene36291:CDS 40.0%
TCTCTTTCGTGGAAATCTTC+TGG - chr2.2:1691977-1691996 MS.gene36291:CDS 40.0%
TCTGAACATCGAGTGCTTAA+TGG - chr2.2:1690952-1690971 MS.gene36291:intron 40.0%
TCTTCAAAAAGGAACCTAGG+CGG - chr2.2:1691167-1691186 MS.gene36291:CDS 40.0%
TCTTCAGAGGAGATCTGTAT+TGG - chr2.2:1690556-1690575 MS.gene36291:CDS 40.0%
TGAAGATCGGTAAAGTAGAC+TGG + chr2.2:1690542-1690561 None:intergenic 40.0%
TGAGAATATCCACATGGTTG+AGG - chr2.2:1691093-1691112 MS.gene36291:CDS 40.0%
TGATGTTTACCAGAATGCCA+GGG - chr2.2:1690862-1690881 MS.gene36291:intron 40.0%
TGGAATTGTGTCTGTTGAGT+CGG - chr2.2:1692319-1692338 MS.gene36291:intron 40.0%
TTCACAGCTACTCAAGTCTT+TGG - chr2.2:1690440-1690459 MS.gene36291:intron 40.0%
TTGATGTTTACCAGAATGCC+AGG - chr2.2:1690861-1690880 MS.gene36291:intron 40.0%
! ACCGATTACCTTCTGTTTCT+CGG + chr2.2:1693845-1693864 None:intergenic 40.0%
! ACTCCAGCAATTGTGTGTTT+TGG - chr2.2:1690209-1690228 MS.gene36291:CDS 40.0%
! CCTTTTCAGTTTCTCTTTCG+TGG - chr2.2:1691966-1691985 MS.gene36291:CDS 40.0%
! CTCAAAAAGGTGAGGCATTT+CGG - chr2.2:1693459-1693478 MS.gene36291:CDS 40.0%
! CTTTGAAGAGGAAGAAACTG+AGG - chr2.2:1692495-1692514 MS.gene36291:CDS 40.0%
! GTTTTCCTTGGAATGTACCT+TGG + chr2.2:1692719-1692738 None:intergenic 40.0%
! TAATGGATGAGAAGGATGTG+AGG - chr2.2:1690969-1690988 MS.gene36291:intron 40.0%
! TACAGATCTCCTCTGAAGAT+CGG + chr2.2:1690555-1690574 None:intergenic 40.0%
! TCAACGAAAGTATGTACGCA+TGG + chr2.2:1693593-1693612 None:intergenic 40.0%
! TCAGCAGATTCTTTGGTAAC+TGG + chr2.2:1692523-1692542 None:intergenic 40.0%
! TCTGATTTGTCAGTCTCCAT+TGG + chr2.2:1694384-1694403 None:intergenic 40.0%
! TTATTGTCTGATTCGCTGTC+TGG + chr2.2:1692013-1692032 None:intergenic 40.0%
!! CTCTCTGGAATTGTCTATAG+CGG - chr2.2:1692991-1693010 MS.gene36291:intron 40.0%
!! CTTTAAAGTACGAGAGTTCC+AGG - chr2.2:1691255-1691274 MS.gene36291:intron 40.0%
!! GCTATAAAGAGTACTCAGAC+AGG - chr2.2:1693728-1693747 MS.gene36291:CDS 40.0%
!! TCTCTGGAATTGTCTATAGC+GGG - chr2.2:1692992-1693011 MS.gene36291:intron 40.0%
!!! AGTGTGGTCGGTTTTGATTT+CGG - chr2.2:1690110-1690129 MS.gene36291:CDS 40.0%
!!! CCTTGTCACCGTTTTTAGTT+TGG + chr2.2:1692265-1692284 None:intergenic 40.0%
!!! CGACACTCATTTTAAAACGG+AGG + chr2.2:1691402-1691421 None:intergenic 40.0%
!!! CGACATTCATTTTGAAACGG+AGG - chr2.2:1691655-1691674 MS.gene36291:intron 40.0%
!!! GGTTTTGGTTTCGTCATGAT+CGG + chr2.2:1694198-1694217 None:intergenic 40.0%
AAAAAGCTGAGGCTGTCGAT+AGG - chr2.2:1694048-1694067 MS.gene36291:CDS 45.0%
AACGGTTTATTGGGACTGCT+GGG - chr2.2:1690240-1690259 MS.gene36291:CDS 45.0%
AACTTCAGGAGGTGGAAGAT+TGG - chr2.2:1693379-1693398 MS.gene36291:CDS 45.0%
AATGACAATGCAGGGGACAA+TGG - chr2.2:1694330-1694349 MS.gene36291:CDS 45.0%
AATGTCACTGAAGGACCTGA+TGG - chr2.2:1690374-1690393 MS.gene36291:intron 45.0%
AATTGCTGGAGTTTCACGCT+TGG + chr2.2:1690201-1690220 None:intergenic 45.0%
ACATCGTTGTCATTGGAGCT+AGG + chr2.2:1692601-1692620 None:intergenic 45.0%
ACGCCCATGTGAAATCATTG+TGG - chr2.2:1692413-1692432 MS.gene36291:CDS 45.0%
ACTTGCAGAAGCAGGTCTTA+CGG - chr2.2:1691069-1691088 MS.gene36291:CDS 45.0%
AGCATGCAAGTTTGCATTGC+CGG - chr2.2:1690719-1690738 MS.gene36291:CDS 45.0%
AGGAGATAAGCCTGTGCAAA+TGG - chr2.2:1692684-1692703 MS.gene36291:intron 45.0%
AGGTGTATACAATGCCAAGC+TGG - chr2.2:1693431-1693450 MS.gene36291:CDS 45.0%
AGTTTGTCGTTGCTTCAGAG+AGG - chr2.2:1693340-1693359 MS.gene36291:CDS 45.0%
ATATCAGCTGACAAGAGGAC+GGG + chr2.2:1694023-1694042 None:intergenic 45.0%
ATCTTCCACCTCCTGAAGTT+TGG + chr2.2:1693379-1693398 None:intergenic 45.0%
ATGGATGAGAAGGATGTGAG+GGG - chr2.2:1690971-1690990 MS.gene36291:intron 45.0%
CAAGCTGGAAGAGCTCAAAA+AGG - chr2.2:1693446-1693465 MS.gene36291:CDS 45.0%
CCATAAACTACCTCTGCAAC+AGG + chr2.2:1693089-1693108 None:intergenic 45.0%
CCCTGCATTGTCATTACTAC+CGG + chr2.2:1694325-1694344 None:intergenic 45.0%
CCGGTAGTAATGACAATGCA+GGG - chr2.2:1694322-1694341 MS.gene36291:CDS 45.0%
CCTGTTGCAGAGGTAGTTTA+TGG - chr2.2:1693086-1693105 MS.gene36291:intron 45.0%
CGGTAGTAATGACAATGCAG+GGG - chr2.2:1694323-1694342 MS.gene36291:CDS 45.0%
CTAGGTATGGGATTTCCCTT+TGG + chr2.2:1692055-1692074 None:intergenic 45.0%
CTGAAGCAACGACAAACTCT+TGG + chr2.2:1693338-1693357 None:intergenic 45.0%
GAATATCCACATGGTTGAGG+TGG - chr2.2:1691096-1691115 MS.gene36291:CDS 45.0%
GATGGTGAAGACGAAACCAA+AGG - chr2.2:1693411-1693430 MS.gene36291:CDS 45.0%
GCCGAGAAACAGAAGGTAAT+CGG - chr2.2:1693841-1693860 MS.gene36291:CDS 45.0%
GCTGTGTTTGTAACAGGTTG+AGG - chr2.2:1693031-1693050 MS.gene36291:intron 45.0%
GGCAACTGTTGATGTTCAGA+AGG - chr2.2:1693115-1693134 MS.gene36291:intron 45.0%
GTCTCGTGAATCAAGTGAAG+CGG + chr2.2:1690608-1690627 None:intergenic 45.0%
GTTTGTCGTTGCTTCAGAGA+GGG - chr2.2:1693341-1693360 MS.gene36291:CDS 45.0%
TACCTCTGCAACAGGAATGT+TGG + chr2.2:1693081-1693100 None:intergenic 45.0%
TACTGTCCCATTCGTACGAT+AGG - chr2.2:1690765-1690784 MS.gene36291:CDS 45.0%
TCTCGTGAATCAAGTGAAGC+GGG + chr2.2:1690607-1690626 None:intergenic 45.0%
TGACATTGCCGAGAAACAGA+AGG - chr2.2:1693834-1693853 MS.gene36291:CDS 45.0%
TGCTTGTGAGAAGCTGAAGA+AGG - chr2.2:1690904-1690923 MS.gene36291:intron 45.0%
TGGAAGAGCTCAAAAAGGTG+AGG - chr2.2:1693451-1693470 MS.gene36291:CDS 45.0%
TGTTCAGAAGGCTGTAGAGA+AGG - chr2.2:1693127-1693146 MS.gene36291:intron 45.0%
TTCAAATCCCTCTGCAGTTC+CGG + chr2.2:1690341-1690360 None:intergenic 45.0%
! AAAAGGTGAGGCATTTCGGA+TGG - chr2.2:1693463-1693482 MS.gene36291:CDS 45.0%
! CAGCTGCCCCTTTTTAAATC+CGG + chr2.2:1690741-1690760 None:intergenic 45.0%
! CGAGTGCTTAATGGATGAGA+AGG - chr2.2:1690961-1690980 MS.gene36291:intron 45.0%
! GAAGATTGGCTATACGAGGA+TGG - chr2.2:1693393-1693412 MS.gene36291:CDS 45.0%
! GCTGTTGTTGATTGCTGCAT+TGG - chr2.2:1690512-1690531 MS.gene36291:CDS 45.0%
! TGACTGGCTGTGTTTGTAAC+AGG - chr2.2:1693025-1693044 MS.gene36291:intron 45.0%
! TTTCGTCATGATCGGCTTAC+AGG + chr2.2:1694190-1694209 None:intergenic 45.0%
!! AGCGGGGTTTGTTATTTGAC+TGG - chr2.2:1693009-1693028 MS.gene36291:intron 45.0%
!! CTCTGGAATTGTCTATAGCG+GGG - chr2.2:1692993-1693012 MS.gene36291:intron 45.0%
!! CTTTTTGAGCTCTTCCAGCT+TGG + chr2.2:1693448-1693467 None:intergenic 45.0%
AACCAACCACCTCAACCATG+TGG + chr2.2:1691105-1691124 None:intergenic 50.0%
AAGGTAACTGCTGATACCCC+TGG - chr2.2:1692637-1692656 MS.gene36291:intron 50.0%
AATCAAGTCCCACCAGTCTC+TGG - chr2.2:1694354-1694373 MS.gene36291:CDS 50.0%
AATCCCTCTCTGCCTTGCAA+CGG + chr2.2:1690156-1690175 None:intergenic 50.0%
ACAACCAGAACAGCAACCTC+AGG - chr2.2:1694287-1694306 MS.gene36291:CDS 50.0%
ACAGCAACTGCCTTGGCTTA+TGG - chr2.2:1690629-1690648 MS.gene36291:intron 50.0%
ACGGTTTATTGGGACTGCTG+GGG - chr2.2:1690241-1690260 MS.gene36291:CDS 50.0%
AGCATGCCCAACATCAACGA+AGG + chr2.2:1690699-1690718 None:intergenic 50.0%
AGGTAACTGCTGATACCCCT+GGG - chr2.2:1692638-1692657 MS.gene36291:intron 50.0%
ATCCACATGGTTGAGGTGGT+TGG - chr2.2:1691100-1691119 MS.gene36291:CDS 50.0%
CAACGGTTTATTGGGACTGC+TGG - chr2.2:1690239-1690258 MS.gene36291:CDS 50.0%
CAGGGACCTATCGTACGAAT+GGG + chr2.2:1690774-1690793 None:intergenic 50.0%
CATTCGTACGATAGGTCCCT+GGG - chr2.2:1690773-1690792 MS.gene36291:CDS 50.0%
CCAATCTTGGAGCGTGTGAA+GGG - chr2.2:1691031-1691050 MS.gene36291:intron 50.0%
CTAGCATTCATAGTCCGCCT+AGG + chr2.2:1691184-1691203 None:intergenic 50.0%
GACCAACATTCCTGTTGCAG+AGG - chr2.2:1693076-1693095 MS.gene36291:intron 50.0%
GACGAAACCAAAACCGAAGC+CGG - chr2.2:1694203-1694222 MS.gene36291:CDS 50.0%
GATAGCTGGTACACGAGAAC+CGG + chr2.2:1691128-1691147 None:intergenic 50.0%
GCCGGTAGTAATGACAATGC+AGG - chr2.2:1694321-1694340 MS.gene36291:CDS 50.0%
GTACCTCTGGATTTGCACTG+AGG + chr2.2:1690931-1690950 None:intergenic 50.0%
GTCAAAATCCCTACCACCCA+GGG + chr2.2:1690792-1690811 None:intergenic 50.0%
TATCAGCTGACAAGAGGACG+GGG + chr2.2:1694022-1694041 None:intergenic 50.0%
TCCAATCTTGGAGCGTGTGA+AGG - chr2.2:1691030-1691049 MS.gene36291:intron 50.0%
TCGTTGTCATTGGAGCTAGG+AGG + chr2.2:1692598-1692617 None:intergenic 50.0%
TCTGCAAGATCGAGTGATGG+AGG - chr2.2:1693163-1693182 MS.gene36291:intron 50.0%
TCTGCAAGTGCCTTCTCCAA+AGG + chr2.2:1691058-1691077 None:intergenic 50.0%
TTGGATGCAGCCACTATTGC+AGG - chr2.2:1690575-1690594 MS.gene36291:intron 50.0%
TTGTCATTGGAGCTAGGAGG+TGG + chr2.2:1692595-1692614 None:intergenic 50.0%
! ATGGTTGAGGTGGTTGGTTC+CGG - chr2.2:1691106-1691125 MS.gene36291:CDS 50.0%
! GGTGGAAGATTGGCTATACG+AGG - chr2.2:1693389-1693408 MS.gene36291:CDS 50.0%
! GGTGGAGTTGTTGGTGTTTC+TGG + chr2.2:1694243-1694262 None:intergenic 50.0%
! GTGGAAGGAGAGAGCTTGTT+TGG - chr2.2:1692851-1692870 MS.gene36291:intron 50.0%
! TGTGAAGGGACCTTTGGAGA+AGG - chr2.2:1691045-1691064 MS.gene36291:intron 50.0%
!! AGGACGGGGTTGGCAAATTT+TGG + chr2.2:1694008-1694027 None:intergenic 50.0%
!! GTTGGTGTTTCTGGAGTAGC+TGG + chr2.2:1694234-1694253 None:intergenic 50.0%
!! TCGATGTTCAGAGGTACCTC+TGG + chr2.2:1690944-1690963 None:intergenic 50.0%
!! TGTTTCTGGAGTAGCTGGCT+TGG + chr2.2:1694229-1694248 None:intergenic 50.0%
ACAACTCCACCTCCTCAGGA+AGG - chr2.2:1694252-1694271 MS.gene36291:CDS 55.0%
ACAGGCTTATCTCCTGCCTC+AGG + chr2.2:1692679-1692698 None:intergenic 55.0%
ACCAACAACTCCACCTCCTC+AGG - chr2.2:1694248-1694267 MS.gene36291:CDS 55.0%
ACCAGAACAGCAACCTCAGG+AGG - chr2.2:1694290-1694309 MS.gene36291:CDS 55.0%
ACCAGTCTCTGGCGAACCAA+TGG - chr2.2:1694365-1694384 MS.gene36291:CDS 55.0%
AGAATGCCAGGGCTTGTCTG+AGG - chr2.2:1690873-1690892 MS.gene36291:intron 55.0%
ATGCTAGCGAGTGTGTTGCC+AGG - chr2.2:1691197-1691216 MS.gene36291:intron 55.0%
CCAGGGACCTATCGTACGAA+TGG + chr2.2:1690775-1690794 None:intergenic 55.0%
CCATTCGTACGATAGGTCCC+TGG - chr2.2:1690772-1690791 MS.gene36291:CDS 55.0%
CCCTTCACACGCTCCAAGAT+TGG + chr2.2:1691034-1691053 None:intergenic 55.0%
CCTCAGGAGGATGCTAATGC+CGG - chr2.2:1694303-1694322 MS.gene36291:CDS 55.0%
CGAGACAACAGCAACTGCCT+TGG - chr2.2:1690622-1690641 MS.gene36291:intron 55.0%
CGGGTGCAAACCTGCAATAG+TGG + chr2.2:1690588-1690607 None:intergenic 55.0%
CGTCAAAATCCCTACCACCC+AGG + chr2.2:1690793-1690812 None:intergenic 55.0%
GAAAATGGCATGCCTGAGGC+AGG - chr2.2:1692664-1692683 MS.gene36291:intron 55.0%
GATACCCCTGGGGCTGAAAA+TGG - chr2.2:1692649-1692668 MS.gene36291:intron 55.0%
GCTGCATTGTTGCCGTTGCA+AGG - chr2.2:1690141-1690160 MS.gene36291:CDS 55.0%
GGCTCTGCAAGATCGAGTGA+TGG - chr2.2:1693160-1693179 MS.gene36291:intron 55.0%
GGCTGAAAATGGCATGCCTG+AGG - chr2.2:1692660-1692679 MS.gene36291:intron 55.0%
GGTAACTGCTGATACCCCTG+GGG - chr2.2:1692639-1692658 MS.gene36291:intron 55.0%
GGTCCTCAGTGCAAATCCAG+AGG - chr2.2:1690925-1690944 MS.gene36291:intron 55.0%
TCAGACAAGCCCTGGCATTC+TGG + chr2.2:1690874-1690893 None:intergenic 55.0%
TCCTGAGGAGGTGGAGTTGT+TGG + chr2.2:1694252-1694271 None:intergenic 55.0%
TGCTAGCGAGTGTGTTGCCA+GGG - chr2.2:1691198-1691217 MS.gene36291:intron 55.0%
TGCTGATCCGGAACTGCAGA+GGG - chr2.2:1690331-1690350 MS.gene36291:intron 55.0%
TTGCCGTTGCAAGGCAGAGA+GGG - chr2.2:1690150-1690169 MS.gene36291:CDS 55.0%
TTGCTGATCCGGAACTGCAG+AGG - chr2.2:1690330-1690349 MS.gene36291:intron 55.0%
! CAGGGCTTGTCTGAGGTTGA+GGG - chr2.2:1690880-1690899 MS.gene36291:intron 55.0%
! TCCTCCTGAGGTTGCTGTTC+TGG + chr2.2:1694294-1694313 None:intergenic 55.0%
! TTGGTTCGCCAGAGACTGGT+GGG + chr2.2:1694365-1694384 None:intergenic 55.0%
!! ATTGGTTCGCCAGAGACTGG+TGG + chr2.2:1694366-1694385 None:intergenic 55.0%
!! GAGAAGGCACTTGCAGAAGC+AGG - chr2.2:1691061-1691080 MS.gene36291:intron 55.0%
!! GGGTGGTAGGGATTTTGACG+AGG - chr2.2:1690793-1690812 MS.gene36291:CDS 55.0%
!! TCCATTGGTTCGCCAGAGAC+TGG + chr2.2:1694369-1694388 None:intergenic 55.0%
!!! CATGCCATTTTCAGCCCCAG+GGG + chr2.2:1692656-1692675 None:intergenic 55.0%
!!! GCATGCCATTTTCAGCCCCA+GGG + chr2.2:1692657-1692676 None:intergenic 55.0%
ACACTGCAATGCAGCACCCC+TGG + chr2.2:1691218-1691237 None:intergenic 60.0%
ACGATAGGTCCCTGGGTGGT+AGG - chr2.2:1690780-1690799 MS.gene36291:CDS 60.0%
AGCTGACAAGAGGACGGGGT+TGG + chr2.2:1694018-1694037 None:intergenic 60.0%
CCGGCATTAGCATCCTCCTG+AGG + chr2.2:1694306-1694325 None:intergenic 60.0%
CCTCAACCTCAGACAAGCCC+TGG + chr2.2:1690882-1690901 None:intergenic 60.0%
CGATAGGTCCCTGGGTGGTA+GGG - chr2.2:1690781-1690800 MS.gene36291:CDS 60.0%
GCTAGCGAGTGTGTTGCCAG+GGG - chr2.2:1691199-1691218 MS.gene36291:intron 60.0%
GGAGCGTGTGAAGGGACCTT+TGG - chr2.2:1691039-1691058 MS.gene36291:intron 60.0%
GTTGCCGTTGCAAGGCAGAG+AGG - chr2.2:1690149-1690168 MS.gene36291:CDS 60.0%
TCGTACGATAGGTCCCTGGG+TGG - chr2.2:1690776-1690795 MS.gene36291:CDS 60.0%
TGCTCACCTTCCTGAGGAGG+TGG + chr2.2:1694261-1694280 None:intergenic 60.0%
TGCTGCTCACCTTCCTGAGG+AGG + chr2.2:1694264-1694283 None:intergenic 60.0%
TGCTGCTGCTCACCTTCCTG+AGG + chr2.2:1694267-1694286 None:intergenic 60.0%
! CCAGGGCTTGTCTGAGGTTG+AGG - chr2.2:1690879-1690898 MS.gene36291:intron 60.0%
!! TCTGGAGTAGCTGGCTTGGC+CGG + chr2.2:1694225-1694244 None:intergenic 60.0%
!!! GGCATGCCATTTTCAGCCCC+AGG + chr2.2:1692658-1692677 None:intergenic 60.0%
GGTGGTGCAGCAGCATCAGC+AGG + chr2.2:1692577-1692596 None:intergenic 65.0%
!! GGCTTGGCCGGCTTCGGTTT+TGG + chr2.2:1694213-1694232 None:intergenic 65.0%
!! GTAGCTGGCTTGGCCGGCTT+CGG + chr2.2:1694219-1694238 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 1690107 1694422 1690107 ID=MS.gene36291
chr2.2 mRNA 1690107 1694422 1690107 ID=MS.gene36291.t1;Parent=MS.gene36291
chr2.2 exon 1693253 1694422 1693253 ID=MS.gene36291.t1.exon1;Parent=MS.gene36291.t1
chr2.2 CDS 1693253 1694422 1693253 ID=cds.MS.gene36291.t1;Parent=MS.gene36291.t1
chr2.2 exon 1692358 1692579 1692358 ID=MS.gene36291.t1.exon2;Parent=MS.gene36291.t1
chr2.2 CDS 1692358 1692579 1692358 ID=cds.MS.gene36291.t1;Parent=MS.gene36291.t1
chr2.2 exon 1692183 1692278 1692183 ID=MS.gene36291.t1.exon3;Parent=MS.gene36291.t1
chr2.2 CDS 1692183 1692278 1692183 ID=cds.MS.gene36291.t1;Parent=MS.gene36291.t1
chr2.2 exon 1691809 1692036 1691809 ID=MS.gene36291.t1.exon4;Parent=MS.gene36291.t1
chr2.2 CDS 1691809 1692036 1691809 ID=cds.MS.gene36291.t1;Parent=MS.gene36291.t1
chr2.2 exon 1691288 1691482 1691288 ID=MS.gene36291.t1.exon5;Parent=MS.gene36291.t1
chr2.2 CDS 1691288 1691482 1691288 ID=cds.MS.gene36291.t1;Parent=MS.gene36291.t1
chr2.2 exon 1691062 1691208 1691062 ID=MS.gene36291.t1.exon6;Parent=MS.gene36291.t1
chr2.2 CDS 1691062 1691208 1691062 ID=cds.MS.gene36291.t1;Parent=MS.gene36291.t1
chr2.2 exon 1690674 1690823 1690674 ID=MS.gene36291.t1.exon7;Parent=MS.gene36291.t1
chr2.2 CDS 1690674 1690823 1690674 ID=cds.MS.gene36291.t1;Parent=MS.gene36291.t1
chr2.2 exon 1690460 1690590 1690460 ID=MS.gene36291.t1.exon8;Parent=MS.gene36291.t1
chr2.2 CDS 1690460 1690590 1690460 ID=cds.MS.gene36291.t1;Parent=MS.gene36291.t1
chr2.2 exon 1690107 1690344 1690107 ID=MS.gene36291.t1.exon9;Parent=MS.gene36291.t1
chr2.2 CDS 1690107 1690344 1690107 ID=cds.MS.gene36291.t1;Parent=MS.gene36291.t1
Gene Sequence

>MS.gene36291

ATGAGTGTGGTCGGTTTTGATTTCGGTAATGAGAGCTGCATTGTTGCCGTTGCAAGGCAGAGAGGGATTGATGTTGTGCTCAACGATGAGTCCAAGCGTGAAACTCCAGCAATTGTGTGTTTTGGTGACAAACAACGGTTTATTGGGACTGCTGGGGCTGCTTCAACTATGATGAATCCGAAAAATTCAATCTCGCAGATAAAGAGATTGATTGGTAAAAAATTTGCTGATCCGGAACTGCAGAGGGATTTGAAGTCATTGCCTTTTAATGTCACTGAAGGACCTGATGGATATCCATTGATTCATGCACGATATCTGGGCGAATCTAGAGAATTCACAGCTACTCAAGTCTTTGGGATGATGTTGTCGAATCTTAAAGAAATAGCTCAGAAAAATCTGAATGCGGCTGTTGTTGATTGCTGCATTGGAATTCCAGTCTACTTTACCGATCTTCAGAGGAGATCTGTATTGGATGCAGCCACTATTGCAGGTTTGCACCCGCTTCACTTGATTCACGAGACAACAGCAACTGCCTTGGCTTATGGAATTTATAAGACTGATCTTCCGGAAAATGAATGGCTGAATGTTGCCTTCGTTGATGTTGGGCATGCTAGCATGCAAGTTTGCATTGCCGGATTTAAAAAGGGGCAGCTGCAAGTACTGTCCCATTCGTACGATAGGTCCCTGGGTGGTAGGGATTTTGACGAGGCTCTTTTCCATCATTTTGCTGCCAAATTTAAGGAGGAATATAAGATTGATGTTTACCAGAATGCCAGGGCTTGTCTGAGGTTGAGGGCTGCTTGTGAGAAGCTGAAGAAGGTCCTCAGTGCAAATCCAGAGGTACCTCTGAACATCGAGTGCTTAATGGATGAGAAGGATGTGAGGGGATTCATCAAGCGTGATGATTTTGAGCAACTATCTCTTCCAATCTTGGAGCGTGTGAAGGGACCTTTGGAGAAGGCACTTGCAGAAGCAGGTCTTACGGTTGAGAATATCCACATGGTTGAGGTGGTTGGTTCCGGTTCTCGTGTACCAGCTATCAACAAAATATTGACAGAGTTCTTCAAAAAGGAACCTAGGCGGACTATGAATGCTAGCGAGTGTGTTGCCAGGGGTGCTGCATTGCAGTGTGCAATTCTCAGTCCAACCTTTAAAGTACGAGAGTTCCAGGTAAATTTTCTATGCTGTACTCTCAACCAGTATGTTCTGTATTTTTGGCATATGTTTTGTATTTTTTTTTGGCATATGTTAGAGAAATCAAAAGTAGTAGATTTACATGAAAATCAATACTCCCTCCGTTTTAAAATGAGTGTCGTTTTAGCCAAAAAAAAATTGTTTCAAAATGAATGTCGCTTTCAATTTTCAATGCAATAATAACTTTTTCTTTTCAATTGTACCCTTCAATTAATACTATATACACATAATTCCGTAGTATTATTTTTTCTTTAATGAAAAACAAACCAATAGTTGATTAGGATAATTTGGTAAAATAACATATCTCTTTCTTTTAATTAATGCATTTCTTAATATGTGTGTAAAAACCTTAAACGACATTCATTTTGAAACGGAGGGAGTAATATTTTGACTTTCAAAAAGTCAAATTCATCTCTTTTCACCATTTTCCAATGCAATATTTCTATTTGTATCTTCTTAACCAATGTCATAAGGACACTCTTTAGCATTTCCCTTGTTATATTTACAAATTGACCATTTTTTGCAGAGAATTGTTATGCATTCTATTATAAATAAATTGTCCATTTTTTGCGGAGAGTTGCATGCGTTCTAATGAGTATAATGTATTGCTTAATGTACTAACAACATTTGTTTACTTCATTATGAGAAGGTCAACGAAAGCTTCCCCTTTTCAGTTTCTCTTTCGTGGAAATCTTCTGGTTCAGATGCACCAGACAGCGAATCAGACAATAAGCAAAGTACCATTGTTTTCCCAAAGGGAAATCCCATACCTAGTTCCAAGGTATTGACATTCTTCAGAACAGGAACCTTTTCTGTTGATGTACAATGTCATGATCTCAGTGAAACGCCTACGAAAATCAGCACATATACTGTAAGTCAGTTTTCATGTTCTTGTACGTTTTACAATATTTTTCCCTATTGGCAGTCTTTTGACTCTTGCATTTGTGCAGATTGGCCCTTTCCAAACTAAAAACGGTGACAAGGGAAAGGTTAAAGCAAAAGTTCGTTTGAATCTTCATGGAATTGTGTCTGTTGAGTCGGCAACAGTAAGTTTTTGTATGCTTAGGGACTGTTATGTTTTTTTTTTTTTTATTCCTCCTTCTTTTCTAATTACGCCCATGTGAAATCATTGTGGTAAACTCCAGAGCGTTTGTTATTGAATTGTTCTTTTTTTTTTTTTTTTTTTGTTAAGCTCTTTGAAGAGGAAGAAACTGAGGTTCCAGTTACCAAAGAATCTGCTGAAGAAAATGCTAAGATGGAAACTGACGAAGCTCCTGCTGATGCTGCTGCACCACCTCCTAGCTCCAATGACAACGATGTTAATATGCAAGATGCTAAGGTAACTGCTGATACCCCTGGGGCTGAAAATGGCATGCCTGAGGCAGGAGATAAGCCTGTGCAAATGGATACAGATACCAAGGTACATTCCAAGGAAAACATTTTTGTGTGCTCAAATAATTTGTTTTCATCCACTTCAATGTGTGCTCAAATAGTTTGTTTTTGACTTGTGTTGTTGCTTTCTTGTATGATTTAATTTTCTTATTTCTATTGTGGAAGGAGAGAGCTTGTTTGGTTTCAAGTTTTCAGACAAACTTATATTTGGTTTTTTTCTTGTTAATTTTATAATAACGCGTAGTTTGCAGATGTTTGTGATTTATAAAGTTCTTGTTGGATATTATGCATCAATAAGCTCTCTGGAATTGTCTATAGCGGGGTTTGTTATTTGACTGGCTGTGTTTGTAACAGGTTGAGGCTCCAAAGAAAAAAGTGAAGAAGACCAACATTCCTGTTGCAGAGGTAGTTTATGGTGCAATGGCAACTGTTGATGTTCAGAAGGCTGTAGAGAAGGAGTTTGAAATGGCTCTGCAAGATCGAGTGATGGAGGAAACAAAAGACAAGAAAAATGCAGTTGAGGCTTATGTCTATGACATGAGAAATAAGGTTAGGATTGTATTGTTTTTTCTTGTTTCTTTCAAATGGTAGTATTTGATTATTAATTGATTTCTTGTTATCAATACAGCTTAATGACAAATACCAAGAGTTTGTCGTTGCTTCAGAGAGGGATGAATTTATTACCAAACTTCAGGAGGTGGAAGATTGGCTATACGAGGATGGTGAAGACGAAACCAAAGGTGTATACAATGCCAAGCTGGAAGAGCTCAAAAAGGTGAGGCATTTCGGATGGTCTTTACTCTTTAGCTGAACTGGTATAAAAAAGTCTCGATGGTGGTTGTATGTTGTAGAGATTCCTTTGATAGCTATCAACACTTTTCAAAATGACTAGGGGCACCATGCGTACATACTTTCGTTGACTACTTTTGTGTAACAAGCAATATGTGAAGGTCCACTGTAGTTATAGTTTTTGCACTCTTAATGAACTTTTTTTTTTTTTTTTATAATTGTAGCAAGGGGATCCAATTGAAGAGCGCTATAAAGAGTACTCAGACAGGGGTGAAGTAATTGATCAACTGATCTATTGTATAAAAAGTTATAGAGAAGCTGCAATGTCTAATGATCCCAAATTTGATCACATTGACATTGCCGAGAAACAGAAGGTAATCGGTATCCAATACTAACACTTCTAATTCATTTCTGGTTGACTTGTAATCTGAAAGTGTTTTCTATTTAAATTTTTTAGGTCTTGAATGAATGTGTAGAAGCTGAGAATTGGCTCAGAGAGAAGAAGCAACAACAAGACTTGCTTCCAAAATTTGCCAACCCCGTCCTCTTGTCAGCTGATATAAGAAAAAAAGCTGAGGCTGTCGATAGGTATATGTTGTAGCTTTATGGATCGAGACTATTATGGTTCTGGCAAAATAGATTCATGTACTAGTTTATTAATCTTTTTTGTATCTAATAATTCTAATTATGTTATCTACAATAGGTCCTGTAAGCCGATCATGACGAAACCAAAACCGAAGCCGGCCAAGCCAGCTACTCCAGAAACACCAACAACTCCACCTCCTCAGGAAGGTGAGCAGCAGCAACAACCAGAACAGCAACCTCAGGAGGATGCTAATGCCGGTAGTAATGACAATGCAGGGGACAATGGTAATCAAGTCCCACCAGTCTCTGGCGAACCAATGGAGACTGACAAATCAGAGAACACAGGCTCAGCCTAA

Protein sequence

>MS.gene36291.t1

MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGKKFADPELQRDLKSLPFNVTEGPDGYPLIHARYLGESREFTATQVFGMMLSNLKEIAQKNLNAAVVDCCIGIPVYFTDLQRRSVLDAATIAGLHPLHLIHETTATALAYGIYKTDLPENEWLNVAFVDVGHASMQVCIAGFKKGQLQVLSHSYDRSLGGRDFDEALFHHFAAKFKEEYKIDVYQNARACLRLRAACEKLKKVLSANPEVPLNIECLMDEKDVRGFIKRDDFEQLSLPILERVKGPLEKALAEAGLTVENIHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGAALQCAILSPTFKVREFQVNESFPFSVSLSWKSSGSDAPDSESDNKQSTIVFPKGNPIPSSKVLTFFRTGTFSVDVQCHDLSETPTKISTYTIGPFQTKNGDKGKVKAKVRLNLHGIVSVESATLFEEEETEVPVTKESAEENAKMETDEAPADAAAPPPSSNDNDVNMQDAKVTADTPGAENGMPEAGDKPVQMDTDTKVEAPKKKVKKTNIPVAEVVYGAMATVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVVASERDEFITKLQEVEDWLYEDGEDETKGVYNAKLEELKKQGDPIEERYKEYSDRGEVIDQLIYCIKSYREAAMSNDPKFDHIDIAEKQKVLNECVEAENWLREKKQQQDLLPKFANPVLLSADIRKKAEAVDRSCKPIMTKPKPKPAKPATPETPTTPPPQEGEQQQQPEQQPQEDANAGSNDNAGDNGNQVPPVSGEPMETDKSENTGSA