Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83045.t1 | RHN78070.1 | 88 | 1032 | 74 | 2 | 2 | 984 | 98 | 1128 | 0.00E+00 | 1818.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83045.t1 | Q9LQV2 | 60.3 | 1035 | 346 | 9 | 2 | 983 | 81 | 1103 | 0.0e+00 | 1214.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83045.t1 | A0A072VR80 | 88.0 | 1032 | 74 | 2 | 2 | 984 | 84 | 1114 | 0.0e+00 | 1818.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055357 | MS.gene83045 | 0.8171 | 3.93E-52 | -1.69E-46 |
| MS.gene055358 | MS.gene83045 | 0.829307 | 5.54E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83045.t1 | MTR_1g032630 | 87.984 | 1032 | 74 | 2 | 2 | 984 | 84 | 1114 | 0.0 | 1863 |
| MS.gene83045.t1 | MTR_1g032720 | 81.880 | 1032 | 138 | 1 | 2 | 984 | 695 | 1726 | 0.0 | 1729 |
| MS.gene83045.t1 | MTR_1g032720 | 61.078 | 668 | 178 | 8 | 2 | 611 | 86 | 729 | 0.0 | 777 |
| MS.gene83045.t1 | MTR_1g032610 | 80.290 | 1035 | 149 | 3 | 2 | 984 | 86 | 1117 | 0.0 | 1683 |
| MS.gene83045.t1 | MTR_1g032610 | 80.290 | 1035 | 149 | 3 | 2 | 984 | 23 | 1054 | 0.0 | 1680 |
| MS.gene83045.t1 | MTR_1g032630 | 86.704 | 707 | 44 | 2 | 2 | 659 | 84 | 789 | 0.0 | 1250 |
| MS.gene83045.t1 | MTR_1g032590 | 55.112 | 1027 | 395 | 9 | 6 | 970 | 85 | 1107 | 0.0 | 1134 |
| MS.gene83045.t1 | MTR_1g032710 | 91.877 | 554 | 45 | 0 | 431 | 984 | 1 | 554 | 0.0 | 1035 |
| MS.gene83045.t1 | MTR_4g106660 | 40.609 | 953 | 505 | 16 | 48 | 961 | 185 | 1115 | 0.0 | 698 |
| MS.gene83045.t1 | MTR_4g106660 | 48.544 | 103 | 53 | 0 | 701 | 803 | 1110 | 1212 | 6.56e-21 | 99.8 |
| MS.gene83045.t1 | MTR_4g106660 | 40.543 | 957 | 508 | 16 | 48 | 965 | 185 | 1119 | 0.0 | 697 |
| MS.gene83045.t1 | MTR_3g107390 | 39.375 | 960 | 503 | 21 | 76 | 975 | 251 | 1191 | 0.0 | 623 |
| MS.gene83045.t1 | MTR_6g088660 | 22.406 | 665 | 368 | 28 | 362 | 932 | 317 | 927 | 7.18e-13 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83045.t1 | AT1G14790 | 60.232 | 1036 | 347 | 9 | 1 | 983 | 80 | 1103 | 0.0 | 1237 |
| MS.gene83045.t1 | AT4G11130 | 39.482 | 1003 | 533 | 21 | 17 | 978 | 159 | 1128 | 0.0 | 699 |
| MS.gene83045.t1 | AT3G49500 | 38.519 | 945 | 507 | 24 | 79 | 967 | 250 | 1176 | 1.06e-177 | 549 |
| MS.gene83045.t1 | AT3G49500 | 38.519 | 945 | 507 | 24 | 79 | 967 | 250 | 1176 | 1.06e-177 | 549 |
| MS.gene83045.t1 | AT3G49500 | 38.519 | 945 | 507 | 24 | 79 | 967 | 250 | 1176 | 1.06e-177 | 549 |
| MS.gene83045.t1 | AT3G49500 | 38.519 | 945 | 507 | 24 | 79 | 967 | 250 | 1176 | 1.06e-177 | 549 |
| MS.gene83045.t1 | AT3G49500 | 38.519 | 945 | 507 | 24 | 79 | 967 | 250 | 1176 | 1.06e-177 | 549 |
| MS.gene83045.t1 | AT2G19930 | 24.681 | 705 | 399 | 30 | 205 | 815 | 174 | 840 | 5.63e-24 | 109 |
| MS.gene83045.t1 | AT2G19930 | 24.681 | 705 | 399 | 30 | 205 | 815 | 180 | 846 | 6.12e-24 | 109 |
| MS.gene83045.t1 | AT2G19930 | 24.294 | 708 | 404 | 28 | 205 | 815 | 174 | 846 | 2.88e-23 | 107 |
| MS.gene83045.t1 | AT2G19910 | 27.802 | 464 | 255 | 18 | 406 | 809 | 401 | 844 | 3.21e-22 | 103 |
| MS.gene83045.t1 | AT2G19910 | 27.484 | 473 | 254 | 19 | 406 | 809 | 401 | 853 | 1.37e-20 | 98.6 |
| MS.gene83045.t1 | AT2G19920 | 25.295 | 593 | 324 | 27 | 304 | 803 | 281 | 847 | 9.55e-19 | 92.4 |
| MS.gene83045.t1 | AT2G19920 | 25.295 | 593 | 324 | 27 | 304 | 803 | 267 | 833 | 1.10e-18 | 92.4 |
| MS.gene83045.t1 | AT2G19920 | 25.295 | 593 | 324 | 27 | 304 | 803 | 268 | 834 | 1.30e-18 | 92.0 |
| MS.gene83045.t1 | AT2G19920 | 25.295 | 593 | 324 | 27 | 304 | 803 | 267 | 833 | 1.31e-18 | 92.0 |
Find 216 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAAAGATTCTCTGTATTT+TGG | 0.106537 | 1.4:+17193362 | MS.gene83045:CDS |
| TATTACATTCTTTGATTTAT+AGG | 0.118908 | 1.4:-17197575 | None:intergenic |
| CAATGATGCTGCAGACATTT+AGG | 0.140329 | 1.4:+17196082 | MS.gene83045:CDS |
| GTTCAGCACGGCTGTCTTTC+AGG | 0.142842 | 1.4:+17194896 | MS.gene83045:CDS |
| GACGATGTTAAACTGTATTT+TGG | 0.159141 | 1.4:+17193325 | MS.gene83045:CDS |
| CTCTTCTGTTTGTAGTTAAT+TGG | 0.176066 | 1.4:+17194530 | MS.gene83045:intron |
| CCCATCATTGCTCTTCCTTT+TGG | 0.190630 | 1.4:-17196150 | None:intergenic |
| TATGGAATTCGAGGGCTTTA+TGG | 0.210906 | 1.4:+17197693 | MS.gene83045:CDS |
| CATGAAGTCTGGATATTCTT+TGG | 0.237086 | 1.4:-17197533 | None:intergenic |
| TAACATAAAATTGGATGTTT+TGG | 0.238256 | 1.4:+17195816 | MS.gene83045:CDS |
| GCACGGATCCATTGCTTATC+AGG | 0.257148 | 1.4:-17194635 | None:intergenic |
| CTATTTAAAAGTTATGAAAA+TGG | 0.261211 | 1.4:+17193258 | None:intergenic |
| GAAACTAGAACCTTAGAATA+TGG | 0.263426 | 1.4:+17196183 | MS.gene83045:CDS |
| TCCATTGGTTCAATTGTTCT+AGG | 0.267079 | 1.4:-17196848 | None:intergenic |
| GCTAGACTTGGACAGTCTTT+TGG | 0.267504 | 1.4:+17195520 | MS.gene83045:CDS |
| AATGATGCTGCAGACATTTA+GGG | 0.287232 | 1.4:+17196083 | MS.gene83045:CDS |
| ATCTCCCATCCATTCCCTTA+TGG | 0.297497 | 1.4:-17195464 | None:intergenic |
| AACTAAGGCACATGAGGTTT+TGG | 0.300915 | 1.4:+17195975 | MS.gene83045:CDS |
| ACTTACCATCATAGTTACTA+TGG | 0.312137 | 1.4:+17197991 | MS.gene83045:CDS |
| TATAAATCAAAGAATGTAAT+AGG | 0.313545 | 1.4:+17197577 | MS.gene83045:CDS |
| GAAAGAAATGGCTCAACATT+AGG | 0.318451 | 1.4:-17196060 | None:intergenic |
| TTCACTCCTTGCAGTTGTAT+TGG | 0.326260 | 1.4:+17194665 | MS.gene83045:CDS |
| TGATTCAGATAACATAAAAT+TGG | 0.328974 | 1.4:+17195807 | MS.gene83045:CDS |
| TTAGATACACTTGTTGATAT+AGG | 0.332995 | 1.4:-17194581 | None:intergenic |
| CGATCTTTCAGCCATCTTGC+AGG | 0.333220 | 1.4:-17195031 | None:intergenic |
| GCTCGAATGCATCCTCATTC+TGG | 0.335394 | 1.4:-17198103 | None:intergenic |
| GGGACATCTACTTTGTTTGT+TGG | 0.336396 | 1.4:+17196807 | MS.gene83045:CDS |
| TAGAAGAATGCCGTTGGCTT+TGG | 0.337561 | 1.4:-17193295 | None:intergenic |
| TGCCATCCGCGTTTCAGATT+CGG | 0.342405 | 1.4:+17195704 | MS.gene83045:CDS |
| TCACTCCTTGCAGTTGTATT+GGG | 0.345151 | 1.4:+17194666 | MS.gene83045:CDS |
| TTGTTCAATATTCTAGCAAT+AGG | 0.353250 | 1.4:+17196214 | MS.gene83045:CDS |
| CAGTCATTCTCATGTAGTTA+AGG | 0.361964 | 1.4:+17196242 | MS.gene83045:CDS |
| TCGATCACCGACTATATCTT+TGG | 0.366042 | 1.4:+17195087 | MS.gene83045:CDS |
| GGTGGTACCGGTATAGATTC+TGG | 0.366224 | 1.4:+17197925 | MS.gene83045:CDS |
| CAATATCTATGCCATTTCTA+AGG | 0.372511 | 1.4:-17195342 | None:intergenic |
| ACATCCGGATTGCAAGAAAA+AGG | 0.372730 | 1.4:-17194803 | None:intergenic |
| CGACTATATCTTTGGATAAC+GGG | 0.374346 | 1.4:+17195095 | MS.gene83045:CDS |
| CTTAGAAATGGCATAGATAT+TGG | 0.374817 | 1.4:+17195343 | MS.gene83045:CDS |
| TTCTGCCCAACCTATTGTAT+TGG | 0.375119 | 1.4:+17196877 | MS.gene83045:CDS |
| ACTGTCATTGAGTATATAAT+TGG | 0.384132 | 1.4:-17197356 | None:intergenic |
| TCTTCACGTATTTCTAAGAA+TGG | 0.393521 | 1.4:+17195286 | MS.gene83045:CDS |
| GGACATCTACTTTGTTTGTT+GGG | 0.393937 | 1.4:+17196808 | MS.gene83045:CDS |
| TCACTTCCGGAACACTCGTT+TGG | 0.395235 | 1.4:-17196776 | None:intergenic |
| ATTCTTTCCATCCTTAGAAA+TGG | 0.402135 | 1.4:+17195331 | MS.gene83045:CDS |
| GGAAAACTTGGTTCATTATG+AGG | 0.403069 | 1.4:+17194745 | MS.gene83045:CDS |
| ATGTTTGCTCGTACAACAAC+TGG | 0.409301 | 1.4:+17195427 | MS.gene83045:CDS |
| AGAAATACGTGAAGATAAAT+CGG | 0.410629 | 1.4:-17195278 | None:intergenic |
| TCCGAATTTCAGGGAAAACT+TGG | 0.416323 | 1.4:+17194733 | MS.gene83045:CDS |
| ATTTAGGGCATCAAAGTTGT+TGG | 0.421669 | 1.4:+17196098 | MS.gene83045:CDS |
| AAACTAGAACCTTAGAATAT+GGG | 0.421804 | 1.4:+17196184 | MS.gene83045:CDS |
| AAAAGTTATCGATATGTTGA+TGG | 0.424991 | 1.4:-17195210 | None:intergenic |
| TATGTCTTCTCTGATGGAAT+CGG | 0.427238 | 1.4:+17195625 | MS.gene83045:CDS |
| TCCATCAGAGAAGACATATT+CGG | 0.427902 | 1.4:-17195620 | None:intergenic |
| CAGAGATTAATGTCTCAAAT+CGG | 0.428075 | 1.4:+17195173 | MS.gene83045:CDS |
| ACTTTAAACAAGATGTGAAA+TGG | 0.429644 | 1.4:-17194863 | None:intergenic |
| AGTTGATCCACTCAAAATAA+AGG | 0.429901 | 1.4:+17194949 | MS.gene83045:CDS |
| CATCCATTCCCTTATGGAAT+CGG | 0.429954 | 1.4:-17195458 | None:intergenic |
| CTTGTTTAAAGTTAATTCCT+TGG | 0.431052 | 1.4:+17194874 | MS.gene83045:CDS |
| ACCATGGAAAGCTTAGAAAA+TGG | 0.431302 | 1.4:-17198041 | None:intergenic |
| ACATCATGATCCAATACAAT+AGG | 0.434504 | 1.4:-17196887 | None:intergenic |
| GACTTACCGCCGATTCCATA+AGG | 0.435845 | 1.4:+17195449 | MS.gene83045:CDS |
| CAAAATCGTTCAACAAAAGA+AGG | 0.436533 | 1.4:+17197836 | MS.gene83045:CDS |
| TGCAGCATCATTGAAAGAAA+TGG | 0.437283 | 1.4:-17196072 | None:intergenic |
| TCCAAAAGGAAGAGCAATGA+TGG | 0.437443 | 1.4:+17196149 | MS.gene83045:CDS |
| CCGACTATATCTTTGGATAA+CGG | 0.440826 | 1.4:+17195094 | MS.gene83045:CDS |
| CCATGTTTAACCTTCGCGTC+AGG | 0.441759 | 1.4:-17195592 | None:intergenic |
| CAAAGAATATCCAGACTTCA+TGG | 0.444746 | 1.4:+17197534 | MS.gene83045:CDS |
| GTCCCCGTCTAGATCACTTC+CGG | 0.446184 | 1.4:-17196789 | None:intergenic |
| GGCTCAGACATTGCTTTAGC+AGG | 0.447457 | 1.4:-17197424 | None:intergenic |
| GGAGTCATATGATTCGGATA+TGG | 0.447757 | 1.4:+17197675 | MS.gene83045:CDS |
| ACAAATTATGACTACAAGTT+GGG | 0.449489 | 1.4:+17197745 | MS.gene83045:CDS |
| TGTACAATGAAGGTATGAAA+AGG | 0.454846 | 1.4:+17198016 | MS.gene83045:CDS |
| ACTAGGATATTTATTCCAAA+AGG | 0.454891 | 1.4:+17196135 | MS.gene83045:CDS |
| AGTCATTCTCATGTAGTTAA+GGG | 0.456086 | 1.4:+17196243 | MS.gene83045:CDS |
| GGGTATAACTGCTGGGATAC+CGG | 0.456638 | 1.4:-17197497 | None:intergenic |
| GCTAAATATGCTGCTAGACT+TGG | 0.459175 | 1.4:+17195508 | MS.gene83045:CDS |
| AACAAATTATGACTACAAGT+TGG | 0.460381 | 1.4:+17197744 | MS.gene83045:CDS |
| TCCACCATGTGGTGCAAAGC+TGG | 0.460475 | 1.4:-17196336 | None:intergenic |
| GGATGAAGATGCGATTACTA+TGG | 0.463160 | 1.4:+17197858 | MS.gene83045:CDS |
| GGCTAAGGAGTCATATGATT+CGG | 0.463518 | 1.4:+17197669 | MS.gene83045:CDS |
| AACATCGCCCGGGTGCAAGC+AGG | 0.469267 | 1.4:-17196289 | None:intergenic |
| TACTATGGTTTGTACAATGA+AGG | 0.470404 | 1.4:+17198006 | MS.gene83045:CDS |
| CTTCACGTATTTCTAAGAAT+GGG | 0.472233 | 1.4:+17195287 | MS.gene83045:CDS |
| GCAACCATGGGAACAACATC+CGG | 0.476437 | 1.4:-17194818 | None:intergenic |
| CCGGAACACTCGTTTGGATG+TGG | 0.476825 | 1.4:-17196770 | None:intergenic |
| TTCAAAACACGAACATCGCC+CGG | 0.477028 | 1.4:-17196300 | None:intergenic |
| AAATATCTCTTGAACTTGCC+AGG | 0.478082 | 1.4:+17195650 | MS.gene83045:CDS |
| AGAAAAGTTGTACTATTCAA+AGG | 0.481118 | 1.4:+17194994 | MS.gene83045:CDS |
| GGAAATCTGATGGACTACTA+TGG | 0.482352 | 1.4:+17197766 | MS.gene83045:CDS |
| ATCTATGCCATTTCTAAGGA+TGG | 0.483375 | 1.4:-17195338 | None:intergenic |
| CGATTCCATAAGGGAATGGA+TGG | 0.486112 | 1.4:+17195459 | MS.gene83045:CDS |
| TTCGGAAAATCTCTGTTACT+AGG | 0.486188 | 1.4:-17194716 | None:intergenic |
| ACGGGTTGGTATATGTTCGC+AGG | 0.489662 | 1.4:+17195113 | MS.gene83045:CDS |
| TTCATTTGTTGACGAGGAGT+TGG | 0.490048 | 1.4:+17195240 | MS.gene83045:CDS |
| CCACATCCAAACGAGTGTTC+CGG | 0.490224 | 1.4:+17196770 | MS.gene83045:CDS |
| ATGTCTTCTCTGATGGAATC+GGG | 0.491936 | 1.4:+17195626 | MS.gene83045:CDS |
| TTTAATGGTGCAGGAGGTGG+AGG | 0.492095 | 1.4:+17197324 | MS.gene83045:intron |
| ATGATCCAATACAATAGGTT+GGG | 0.494319 | 1.4:-17196882 | None:intergenic |
| ACTGAATCAGAAATCCTTAG+TGG | 0.496693 | 1.4:+17197796 | MS.gene83045:CDS |
| ACCGAATATGTCTTCTCTGA+TGG | 0.497328 | 1.4:+17195619 | MS.gene83045:CDS |
| GTGGTACCGGTATAGATTCT+GGG | 0.497755 | 1.4:+17197926 | MS.gene83045:CDS |
| TATATACTCAATGACAGTCT+TGG | 0.498477 | 1.4:+17197361 | MS.gene83045:CDS |
| CCCATGGTTGCTCCTCCTCA+AGG | 0.503965 | 1.4:+17194830 | MS.gene83045:CDS |
| TTCTCATGTAGTTAAGGGTA+TGG | 0.504964 | 1.4:+17196248 | MS.gene83045:CDS |
| TTTACTTGTTCAAATCAAGA+AGG | 0.509728 | 1.4:+17198074 | MS.gene83045:CDS |
| CGATTTGAGACATTAATCTC+TGG | 0.510436 | 1.4:-17195172 | None:intergenic |
| TGGTTCATTGACGGTGGTAC+CGG | 0.511504 | 1.4:+17197913 | MS.gene83045:CDS |
| CACGGATCCATTGCTTATCA+GGG | 0.512422 | 1.4:-17194634 | None:intergenic |
| CTGAAACTCTAAGCGTCAGC+AGG | 0.513753 | 1.4:+17195551 | MS.gene83045:CDS |
| TGTGAGGTCCCTACGGAAAG+AGG | 0.515157 | 1.4:+17197882 | MS.gene83045:CDS |
| AGAGATTAATGTCTCAAATC+GGG | 0.515941 | 1.4:+17195174 | MS.gene83045:CDS |
| TGGAAGAAAGTTTCAGTCGC+AGG | 0.517680 | 1.4:+17198127 | MS.gene83045:CDS |
| GTACAATGAAGGTATGAAAA+GGG | 0.521264 | 1.4:+17198017 | MS.gene83045:CDS |
| GTTCCGGAAGTGATCTAGAC+GGG | 0.525385 | 1.4:+17196786 | MS.gene83045:CDS |
| TACATCCTTCACACTTGAAG+TGG | 0.526578 | 1.4:+17197648 | MS.gene83045:CDS |
| CATGATCCAATACAATAGGT+TGG | 0.527023 | 1.4:-17196883 | None:intergenic |
| TGATTCGGATATGGAATTCG+AGG | 0.528929 | 1.4:+17197684 | MS.gene83045:CDS |
| CGTTTCAGATTCGGTATGGC+GGG | 0.529342 | 1.4:+17195713 | MS.gene83045:CDS |
| CTTCACACTTGAAGTGGCTA+AGG | 0.531272 | 1.4:+17197654 | MS.gene83045:CDS |
| GCGAGGAGTTGGTTCATTGA+CGG | 0.532679 | 1.4:+17197904 | MS.gene83045:CDS |
| GGATCATGATGTTGAGATTG+AGG | 0.532865 | 1.4:+17196898 | MS.gene83045:CDS |
| AGCTTTGCAAGTTCAATACA+TGG | 0.533550 | 1.4:-17197445 | None:intergenic |
| TACGGAAAGAGGCGAGGAGT+TGG | 0.535667 | 1.4:+17197893 | MS.gene83045:CDS |
| ACTTACCGCCGATTCCATAA+GGG | 0.536172 | 1.4:+17195450 | MS.gene83045:CDS |
| CGATATGTTGATGGAAATGA+CGG | 0.541344 | 1.4:-17195201 | None:intergenic |
| CTACAAGTTGGGAAATCTGA+TGG | 0.542458 | 1.4:+17197756 | MS.gene83045:CDS |
| CAATCCGGATGTTGTTCCCA+TGG | 0.542528 | 1.4:+17194814 | MS.gene83045:CDS |
| TGCAAAGACTGTGTGTGCAT+TGG | 0.543894 | 1.4:-17197392 | None:intergenic |
| ACCTAGAACAATTGAACCAA+TGG | 0.544402 | 1.4:+17196847 | MS.gene83045:CDS |
| TGGGCAGAATCATACTCCAT+TGG | 0.545458 | 1.4:-17196863 | None:intergenic |
| ATTCGGTATGGCGGGTACAA+AGG | 0.545736 | 1.4:+17195721 | MS.gene83045:CDS |
| TATATCTTTGGATAACGGGT+TGG | 0.546193 | 1.4:+17195099 | MS.gene83045:CDS |
| TCCGCGTTTCAGATTCGGTA+TGG | 0.546663 | 1.4:+17195709 | MS.gene83045:CDS |
| ACATCGCCCGGGTGCAAGCA+GGG | 0.548794 | 1.4:-17196288 | None:intergenic |
| CTATGGCTGTGAGGTCCCTA+CGG | 0.551403 | 1.4:+17197875 | MS.gene83045:CDS |
| AGAAGGAGAAAGCCAGAATG+AGG | 0.551650 | 1.4:+17198091 | MS.gene83045:CDS |
| TATACTAACAGATTCAACTA+AGG | 0.553086 | 1.4:+17195960 | MS.gene83045:CDS |
| CCACAAAAGTATACTTTGCA+TGG | 0.555207 | 1.4:-17195148 | None:intergenic |
| CCGCCGATTCCATAAGGGAA+TGG | 0.555415 | 1.4:+17195455 | MS.gene83045:CDS |
| TATTCTTTGGCGAAAAGATG+AGG | 0.556058 | 1.4:-17197520 | None:intergenic |
| GTGCAAAGCTGGCACATCCA+CGG | 0.557638 | 1.4:-17196325 | None:intergenic |
| TACATTCTTTGATTTATAGG+TGG | 0.561468 | 1.4:-17197572 | None:intergenic |
| TGGAATTGCGACAAAAGACT+AGG | 0.562821 | 1.4:+17196118 | MS.gene83045:CDS |
| CTTATCCACTCTTGATGTCA+AGG | 0.563615 | 1.4:+17195888 | MS.gene83045:CDS |
| TCCTTGAGGAGGAGCAACCA+TGG | 0.565876 | 1.4:-17194831 | None:intergenic |
| ATTGGTTCAATTGTTCTAGG+TGG | 0.568502 | 1.4:-17196845 | None:intergenic |
| ATTCTTTGGCGAAAAGATGA+GGG | 0.569082 | 1.4:-17197519 | None:intergenic |
| CAAGGTATTTCAACTGAGGG+TGG | 0.570622 | 1.4:+17197619 | MS.gene83045:CDS |
| CGGGTTGGTATATGTTCGCA+GGG | 0.575499 | 1.4:+17195114 | MS.gene83045:CDS |
| GACAACATCACAGACGAGGT+TGG | 0.580619 | 1.4:-17195760 | None:intergenic |
| ACAAACCATAGTAACTATGA+TGG | 0.581319 | 1.4:-17197996 | None:intergenic |
| ATTCAAGGTATTTCAACTGA+GGG | 0.581387 | 1.4:+17197616 | MS.gene83045:CDS |
| AACTAGAACCTTAGAATATG+GGG | 0.582040 | 1.4:+17196185 | MS.gene83045:CDS |
| AATGAGGATGCATTCGAGCA+TGG | 0.583156 | 1.4:+17198107 | MS.gene83045:CDS |
| GAGATTCCCCTGATAAGCAA+TGG | 0.583787 | 1.4:+17194627 | MS.gene83045:CDS |
| TCAAAACACGAACATCGCCC+GGG | 0.584003 | 1.4:-17196299 | None:intergenic |
| TCTGTTATGAACCTGCAAGA+TGG | 0.584270 | 1.4:+17195020 | MS.gene83045:CDS |
| GATTCGGATATGGAATTCGA+GGG | 0.584692 | 1.4:+17197685 | MS.gene83045:CDS |
| CTGAATCAGAAATCCTTAGT+GGG | 0.584760 | 1.4:+17197797 | MS.gene83045:CDS |
| CCGTTATCCAAAGATATAGT+CGG | 0.588330 | 1.4:-17195094 | None:intergenic |
| AGTTGCGTGAAAACTCGCTA+TGG | 0.589305 | 1.4:+17195404 | MS.gene83045:CDS |
| AAAATCGTTCAACAAAAGAA+GGG | 0.590185 | 1.4:+17197837 | MS.gene83045:CDS |
| GGTTCATTATGAGGAAATCG+AGG | 0.591279 | 1.4:+17194754 | MS.gene83045:CDS |
| GGTATTTGAATTCCTTGAGG+AGG | 0.592430 | 1.4:-17194842 | None:intergenic |
| AAAGATATAGTCGGTGATCG+AGG | 0.593822 | 1.4:-17195085 | None:intergenic |
| CTTAGCCACTTCAAGTGTGA+AGG | 0.595199 | 1.4:-17197653 | None:intergenic |
| TGAAGTCACTAATATTCTCA+AGG | 0.596401 | 1.4:+17196014 | MS.gene83045:CDS |
| GTTAATTCCTTGGTTCAGCA+CGG | 0.599114 | 1.4:+17194884 | MS.gene83045:CDS |
| ACGTGTTTCATTTGTTGACG+AGG | 0.601367 | 1.4:+17195234 | MS.gene83045:CDS |
| ACTCCTCGCCTCTTTCCGTA+GGG | 0.602459 | 1.4:-17197890 | None:intergenic |
| CATATGCAAAAGCTTCAGCT+TGG | 0.602669 | 1.4:+17197959 | MS.gene83045:CDS |
| ATCACTCCCAGAATCTATAC+CGG | 0.603218 | 1.4:-17197932 | None:intergenic |
| TACCGAATCTGAAACGCGGA+TGG | 0.603579 | 1.4:-17195706 | None:intergenic |
| AACTCCTCGCCTCTTTCCGT+AGG | 0.604252 | 1.4:-17197891 | None:intergenic |
| CCAAAAGGAAGAGCAATGAT+GGG | 0.604423 | 1.4:+17196150 | MS.gene83045:CDS |
| GTTCATTATGAGGAAATCGA+GGG | 0.604956 | 1.4:+17194755 | MS.gene83045:CDS |
| AGAAATGGCATAGATATTGG+TGG | 0.607871 | 1.4:+17195346 | MS.gene83045:CDS |
| AGATTCAACTAAGGCACATG+AGG | 0.610998 | 1.4:+17195969 | MS.gene83045:CDS |
| AAGACAGCCGTGCTGAACCA+AGG | 0.611534 | 1.4:-17194891 | None:intergenic |
| CCTTGAGGAGGAGCAACCAT+GGG | 0.613313 | 1.4:-17194830 | None:intergenic |
| TGTGCCAGCTTTGCACCACA+TGG | 0.616325 | 1.4:+17196332 | MS.gene83045:CDS |
| TCTTGAACTTGCCAGGAGAG+TGG | 0.617568 | 1.4:+17195657 | MS.gene83045:CDS |
| AATGGTATTTGAATTCCTTG+AGG | 0.617830 | 1.4:-17194845 | None:intergenic |
| AATTCAAGGTATTTCAACTG+AGG | 0.618205 | 1.4:+17197615 | MS.gene83045:CDS |
| TGGCGGGTACAAAGGAGTTG+TGG | 0.620817 | 1.4:+17195729 | MS.gene83045:CDS |
| GCGTTTCAGATTCGGTATGG+CGG | 0.624067 | 1.4:+17195712 | MS.gene83045:CDS |
| CCATTCCCTTATGGAATCGG+CGG | 0.625630 | 1.4:-17195455 | None:intergenic |
| AGGAATCTTTAGACATATAG+CGG | 0.630016 | 1.4:-17194696 | None:intergenic |
| ACTGTCCTTGACATCAAGAG+TGG | 0.630808 | 1.4:-17195893 | None:intergenic |
| AATCTGTAGAAGAATGCCGT+TGG | 0.636903 | 1.4:-17193301 | None:intergenic |
| AATTGTCGATTGAGATAACA+AGG | 0.636922 | 1.4:-17195856 | None:intergenic |
| AGTAAATCGTAAACACACCA+TGG | 0.638736 | 1.4:-17198057 | None:intergenic |
| CCTGACGCGAAGGTTAAACA+TGG | 0.640840 | 1.4:+17195592 | MS.gene83045:CDS |
| AGATATTGATCCAAAGCCAA+CGG | 0.640968 | 1.4:+17193285 | MS.gene83045:CDS |
| TCTCTGTAATAGTTCTTCAG+AGG | 0.641395 | 1.4:-17194608 | None:intergenic |
| TTCTTTGGCGAAAAGATGAG+GGG | 0.641437 | 1.4:-17197518 | None:intergenic |
| AATCGAGGGTCAATACACAT+TGG | 0.643950 | 1.4:+17194769 | MS.gene83045:CDS |
| GGTCAATACACATTGGAGAG+AGG | 0.645380 | 1.4:+17194776 | MS.gene83045:CDS |
| GACTGCCCAATACAACTGCA+AGG | 0.646493 | 1.4:-17194671 | None:intergenic |
| AAGGAGTGAAATCTATCGCA+CGG | 0.647159 | 1.4:-17194652 | None:intergenic |
| GATATAGTCGGTGATCGAGG+CGG | 0.647948 | 1.4:-17195082 | None:intergenic |
| AGGAGTTGGTTCATTGACGG+TGG | 0.653077 | 1.4:+17197907 | MS.gene83045:CDS |
| TGTTCCGGAAGTGATCTAGA+CGG | 0.654419 | 1.4:+17196785 | MS.gene83045:CDS |
| CTCAAGGAGATGCTTATCTG+TGG | 0.655771 | 1.4:+17196030 | MS.gene83045:CDS |
| ACGGATCCATTGCTTATCAG+GGG | 0.669281 | 1.4:-17194633 | None:intergenic |
| GGTCCCTACGGAAAGAGGCG+AGG | 0.677635 | 1.4:+17197887 | MS.gene83045:CDS |
| CAGTGACAACATCACAGACG+AGG | 0.679765 | 1.4:-17195764 | None:intergenic |
| GATTCCATAAGGGAATGGAT+GGG | 0.681968 | 1.4:+17195460 | MS.gene83045:CDS |
| TCTTTGGCGAAAAGATGAGG+GGG | 0.692139 | 1.4:-17197517 | None:intergenic |
| GCCAGCTTTGCACCACATGG+TGG | 0.693121 | 1.4:+17196335 | MS.gene83045:CDS |
| AAACAACACAATCCACCATG+TGG | 0.709334 | 1.4:-17196347 | None:intergenic |
| TTCCGGAAGTGATCTAGACG+GGG | 0.717127 | 1.4:+17196787 | MS.gene83045:CDS |
| ATGCGATTACTATGGCTGTG+AGG | 0.732696 | 1.4:+17197866 | MS.gene83045:CDS |
| CGTCTGTGATGTTGTCACTG+AGG | 0.737838 | 1.4:+17195767 | MS.gene83045:CDS |
| GCCATACCGAATCTGAAACG+CGG | 0.743631 | 1.4:-17195710 | None:intergenic |
| GAGGCGGATTATTTGCACTG+AGG | 0.750554 | 1.4:-17195066 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAATAAGATTTATCATA+TGG | - | chr1.4:17194509-17194528 | None:intergenic | 15.0% |
| !! | ACAAATAAGATTTATCATAT+GGG | - | chr1.4:17194508-17194527 | None:intergenic | 15.0% |
| !! | ATAAAAAAAATGACAAAAGA+GGG | - | chr1.4:17196707-17196726 | None:intergenic | 15.0% |
| !! | TATAAAAAAAATGACAAAAG+AGG | - | chr1.4:17196708-17196727 | None:intergenic | 15.0% |
| !! | TATAAATCAAAGAATGTAAT+AGG | + | chr1.4:17197577-17197596 | MS.gene83045:CDS | 15.0% |
| !!! | ATGTTTATTTTTAGAAAGTA+AGG | - | chr1.4:17194354-17194373 | None:intergenic | 15.0% |
| !!! | TATCATCTAGAATATTATTT+TGG | + | chr1.4:17196639-17196658 | MS.gene83045:intron | 15.0% |
| !!! | TATTACATTCTTTGATTTAT+AGG | - | chr1.4:17197578-17197597 | None:intergenic | 15.0% |
| !!! | TTTTTCTTGTATTTTTTGTA+TGG | + | chr1.4:17196953-17196972 | MS.gene83045:intron | 15.0% |
| !! | TGATTCAGATAACATAAAAT+TGG | + | chr1.4:17195807-17195826 | MS.gene83045:CDS | 20.0% |
| !!! | AACAATGTTGGTTTTTTTTT+GGG | + | chr1.4:17193686-17193705 | MS.gene83045:intron | 20.0% |
| !!! | AGTTTTATCTTTGTGAAATA+GGG | + | chr1.4:17193650-17193669 | MS.gene83045:intron | 20.0% |
| !!! | ATATTATTTTGGCAAAAGAA+TGG | + | chr1.4:17196650-17196669 | MS.gene83045:intron | 20.0% |
| !!! | ATGTAATAGGAAAACTTTTT+AGG | + | chr1.4:17197590-17197609 | MS.gene83045:CDS | 20.0% |
| !!! | ATTTAGCCACATTTTTTATA+CGG | - | chr1.4:17195495-17195514 | None:intergenic | 20.0% |
| !!! | TAACATAAAATTGGATGTTT+TGG | + | chr1.4:17195816-17195835 | MS.gene83045:CDS | 20.0% |
| !!! | TAGTTTTATCTTTGTGAAAT+AGG | + | chr1.4:17193649-17193668 | MS.gene83045:intron | 20.0% |
| !!! | TGATTTTTTATGAACAATGT+TGG | + | chr1.4:17193674-17193693 | MS.gene83045:intron | 20.0% |
| !!! | TGTAATAGGAAAACTTTTTA+GGG | + | chr1.4:17197591-17197610 | MS.gene83045:CDS | 20.0% |
| ! | AAAAGTTATCGATATGTTGA+TGG | - | chr1.4:17195213-17195232 | None:intergenic | 25.0% |
| ! | AAAATCGTTCAACAAAAGAA+GGG | + | chr1.4:17197837-17197856 | MS.gene83045:CDS | 25.0% |
| ! | AAACTAGAACCTTAGAATAT+GGG | + | chr1.4:17196184-17196203 | MS.gene83045:CDS | 25.0% |
| ! | AAAGTTGAAGAGATCAAAAT+TGG | - | chr1.4:17194419-17194438 | None:intergenic | 25.0% |
| ! | AACAAATTATGACTACAAGT+TGG | + | chr1.4:17197744-17197763 | MS.gene83045:CDS | 25.0% |
| ! | AATAAGCTAAAAACAGCTTA+TGG | - | chr1.4:17197136-17197155 | None:intergenic | 25.0% |
| ! | AATACAAGAAAAAATGCCTA+TGG | - | chr1.4:17196946-17196965 | None:intergenic | 25.0% |
| ! | ACAAATTATGACTACAAGTT+GGG | + | chr1.4:17197745-17197764 | MS.gene83045:CDS | 25.0% |
| ! | ACTAGGATATTTATTCCAAA+AGG | + | chr1.4:17196135-17196154 | MS.gene83045:CDS | 25.0% |
| ! | ACTGTCATTGAGTATATAAT+TGG | - | chr1.4:17197359-17197378 | None:intergenic | 25.0% |
| ! | ACTTTAAACAAGATGTGAAA+TGG | - | chr1.4:17194866-17194885 | None:intergenic | 25.0% |
| ! | AGAAAAGTTGTACTATTCAA+AGG | + | chr1.4:17194994-17195013 | MS.gene83045:CDS | 25.0% |
| ! | AGAAATACGTGAAGATAAAT+CGG | - | chr1.4:17195281-17195300 | None:intergenic | 25.0% |
| ! | ATAACTTGATTTCTAATACC+AGG | + | chr1.4:17196747-17196766 | MS.gene83045:intron | 25.0% |
| ! | CAAATGGAACAAATTACAAA+TGG | + | chr1.4:17194076-17194095 | MS.gene83045:intron | 25.0% |
| ! | GGTATTAGAAATCAAGTTAT+CGG | - | chr1.4:17196747-17196766 | None:intergenic | 25.0% |
| ! | TAAAACTGTAAGTGTTTGAA+TGG | - | chr1.4:17196555-17196574 | None:intergenic | 25.0% |
| ! | TATACTAACAGATTCAACTA+AGG | + | chr1.4:17195960-17195979 | MS.gene83045:CDS | 25.0% |
| ! | TTAAGTATTCAAGGATATGT+TGG | + | chr1.4:17197293-17197312 | MS.gene83045:intron | 25.0% |
| ! | TTGTTCAATATTCTAGCAAT+AGG | + | chr1.4:17196214-17196233 | MS.gene83045:CDS | 25.0% |
| ! | TTTACTTGTTCAAATCAAGA+AGG | + | chr1.4:17198074-17198093 | MS.gene83045:CDS | 25.0% |
| !! | ATTGATTTATGAGACATCTA+TGG | + | chr1.4:17193786-17193805 | MS.gene83045:intron | 25.0% |
| !! | CTTGTTTAAAGTTAATTCCT+TGG | + | chr1.4:17194874-17194893 | MS.gene83045:CDS | 25.0% |
| !! | TACATTCTTTGATTTATAGG+TGG | - | chr1.4:17197575-17197594 | None:intergenic | 25.0% |
| !! | TGTCATGATATATCTGATTT+TGG | + | chr1.4:17193614-17193633 | MS.gene83045:intron | 25.0% |
| !! | TTAGATACACTTGTTGATAT+AGG | - | chr1.4:17194584-17194603 | None:intergenic | 25.0% |
| !! | TTTTAGCCGTATAAAAAATG+TGG | + | chr1.4:17195486-17195505 | MS.gene83045:CDS | 25.0% |
| !! | TTTTCATAATATTCCCACTA+AGG | - | chr1.4:17197813-17197832 | None:intergenic | 25.0% |
| !! | TTTTTGCTCCATATGAATTA+TGG | + | chr1.4:17193553-17193572 | MS.gene83045:intron | 25.0% |
| !!! | AAACTTTTTAGGGAAATTCA+AGG | + | chr1.4:17197601-17197620 | MS.gene83045:CDS | 25.0% |
| !!! | GAACAATGTTGGTTTTTTTT+TGG | + | chr1.4:17193685-17193704 | MS.gene83045:intron | 25.0% |
| AAAAACTTCCCCATATTCTA+AGG | - | chr1.4:17196196-17196215 | None:intergenic | 30.0% | |
| AAACTTTATTACCACTGCAT+AGG | + | chr1.4:17194160-17194179 | MS.gene83045:intron | 30.0% | |
| AACATCCACCATAATTCATA+TGG | - | chr1.4:17193564-17193583 | None:intergenic | 30.0% | |
| AACTAGAACCTTAGAATATG+GGG | + | chr1.4:17196185-17196204 | MS.gene83045:CDS | 30.0% | |
| AATGGTATTTGAATTCCTTG+AGG | - | chr1.4:17194848-17194867 | None:intergenic | 30.0% | |
| ACAAACCATAGTAACTATGA+TGG | - | chr1.4:17197999-17198018 | None:intergenic | 30.0% | |
| ACATCATGATCCAATACAAT+AGG | - | chr1.4:17196890-17196909 | None:intergenic | 30.0% | |
| ACTTACCATCATAGTTACTA+TGG | + | chr1.4:17197991-17198010 | MS.gene83045:CDS | 30.0% | |
| AGACAATTTAGAAGAGCTTA+TGG | + | chr1.4:17197092-17197111 | MS.gene83045:intron | 30.0% | |
| AGAGATTAATGTCTCAAATC+GGG | + | chr1.4:17195174-17195193 | MS.gene83045:CDS | 30.0% | |
| AGCGCTTAATTAAGTATTCA+AGG | + | chr1.4:17197284-17197303 | MS.gene83045:intron | 30.0% | |
| AGGAATCTTTAGACATATAG+CGG | - | chr1.4:17194699-17194718 | None:intergenic | 30.0% | |
| AGTAATGTCCAATGAGAAAA+TGG | - | chr1.4:17196604-17196623 | None:intergenic | 30.0% | |
| AGTCATTCTCATGTAGTTAA+GGG | + | chr1.4:17196243-17196262 | MS.gene83045:CDS | 30.0% | |
| AGTTGATCCACTCAAAATAA+AGG | + | chr1.4:17194949-17194968 | MS.gene83045:CDS | 30.0% | |
| ATGATCCAATACAATAGGTT+GGG | - | chr1.4:17196885-17196904 | None:intergenic | 30.0% | |
| ATGGCTATAGTAAGATTTGA+AGG | + | chr1.4:17193805-17193824 | MS.gene83045:intron | 30.0% | |
| ATTCTTTCCATCCTTAGAAA+TGG | + | chr1.4:17195331-17195350 | MS.gene83045:CDS | 30.0% | |
| CAAAATCGTTCAACAAAAGA+AGG | + | chr1.4:17197836-17197855 | MS.gene83045:CDS | 30.0% | |
| CAGAGATTAATGTCTCAAAT+CGG | + | chr1.4:17195173-17195192 | MS.gene83045:CDS | 30.0% | |
| CTCTTCTGTTTGTAGTTAAT+TGG | + | chr1.4:17194530-17194549 | MS.gene83045:intron | 30.0% | |
| CTTAGAAATGGCATAGATAT+TGG | + | chr1.4:17195343-17195362 | MS.gene83045:CDS | 30.0% | |
| GAAACTAGAACCTTAGAATA+TGG | + | chr1.4:17196183-17196202 | MS.gene83045:CDS | 30.0% | |
| GGAACAAATTACAAATGGAT+AGG | + | chr1.4:17194081-17194100 | MS.gene83045:intron | 30.0% | |
| TATATACTCAATGACAGTCT+TGG | + | chr1.4:17197361-17197380 | MS.gene83045:CDS | 30.0% | |
| TATGCAGTGGTAATAAAGTT+TGG | - | chr1.4:17194161-17194180 | None:intergenic | 30.0% | |
| TGAAGTCACTAATATTCTCA+AGG | + | chr1.4:17196014-17196033 | MS.gene83045:CDS | 30.0% | |
| ! | AAGAATGGACATTTTGTCAT+TGG | + | chr1.4:17196665-17196684 | MS.gene83045:intron | 30.0% |
| ! | AATTCAAGGTATTTCAACTG+AGG | + | chr1.4:17197615-17197634 | MS.gene83045:CDS | 30.0% |
| ! | AATTGTCGATTGAGATAACA+AGG | - | chr1.4:17195859-17195878 | None:intergenic | 30.0% |
| ! | AGGAAAGATTCTCTGTATTT+TGG | + | chr1.4:17193362-17193381 | MS.gene83045:CDS | 30.0% |
| ! | AGTCAATTCCATTTTCTCAT+TGG | + | chr1.4:17196593-17196612 | MS.gene83045:intron | 30.0% |
| ! | ATTCAAGGTATTTCAACTGA+GGG | + | chr1.4:17197616-17197635 | MS.gene83045:CDS | 30.0% |
| ! | CAATATCTATGCCATTTCTA+AGG | - | chr1.4:17195345-17195364 | None:intergenic | 30.0% |
| ! | CTTCACGTATTTCTAAGAAT+GGG | + | chr1.4:17195287-17195306 | MS.gene83045:CDS | 30.0% |
| ! | GAAAGATTCTCTGTATTTTG+GGG | + | chr1.4:17193364-17193383 | MS.gene83045:CDS | 30.0% |
| ! | GACGATGTTAAACTGTATTT+TGG | + | chr1.4:17193325-17193344 | MS.gene83045:CDS | 30.0% |
| ! | GGAAAGATTCTCTGTATTTT+GGG | + | chr1.4:17193363-17193382 | MS.gene83045:CDS | 30.0% |
| ! | GTACAATGAAGGTATGAAAA+GGG | + | chr1.4:17198017-17198036 | MS.gene83045:CDS | 30.0% |
| ! | TACTATGGTTTGTACAATGA+AGG | + | chr1.4:17198006-17198025 | MS.gene83045:CDS | 30.0% |
| ! | TCTTCACGTATTTCTAAGAA+TGG | + | chr1.4:17195286-17195305 | MS.gene83045:CDS | 30.0% |
| ! | TGTACAATGAAGGTATGAAA+AGG | + | chr1.4:17198016-17198035 | MS.gene83045:CDS | 30.0% |
| ! | TTGTTCCATTTGTTGCAATT+TGG | - | chr1.4:17194068-17194087 | None:intergenic | 30.0% |
| ! | TTTTGTAAGGATGAGTTAAG+CGG | - | chr1.4:17194115-17194134 | None:intergenic | 30.0% |
| !! | ATGTTGGTAACATGGTTTAA+TGG | + | chr1.4:17197309-17197328 | MS.gene83045:intron | 30.0% |
| !!! | AACTCAACCTTTATTTTGAG+TGG | - | chr1.4:17194959-17194978 | None:intergenic | 30.0% |
| !!! | GTTTTTTTTTGGGTGTAAAC+CGG | + | chr1.4:17193696-17193715 | MS.gene83045:intron | 30.0% |
| !!! | TGTGTTGTTTTTCCTCAAAA+AGG | + | chr1.4:17196360-17196379 | MS.gene83045:CDS | 30.0% |
| !!! | TTTTTTTTTGGGTGTAAACC+GGG | + | chr1.4:17193697-17193716 | MS.gene83045:intron | 30.0% |
| AAAAATTATTCCTGACGCGA+AGG | + | chr1.4:17195582-17195601 | MS.gene83045:CDS | 35.0% | |
| AAATATCTCTTGAACTTGCC+AGG | + | chr1.4:17195650-17195669 | MS.gene83045:CDS | 35.0% | |
| AACTGTAAGTGTTTGAATGG+AGG | - | chr1.4:17196552-17196571 | None:intergenic | 35.0% | |
| AATGATGCTGCAGACATTTA+GGG | + | chr1.4:17196083-17196102 | MS.gene83045:CDS | 35.0% | |
| ACATTAAGCTCAAAAACACG+AGG | - | chr1.4:17194560-17194579 | None:intergenic | 35.0% | |
| ACCATGGAAAGCTTAGAAAA+TGG | - | chr1.4:17198044-17198063 | None:intergenic | 35.0% | |
| ACCTAGAACAATTGAACCAA+TGG | + | chr1.4:17196847-17196866 | MS.gene83045:CDS | 35.0% | |
| ACTGAATCAGAAATCCTTAG+TGG | + | chr1.4:17197796-17197815 | MS.gene83045:CDS | 35.0% | |
| AGAAATGGCATAGATATTGG+TGG | + | chr1.4:17195346-17195365 | MS.gene83045:CDS | 35.0% | |
| AGATATTGATCCAAAGCCAA+CGG | + | chr1.4:17193285-17193304 | MS.gene83045:CDS | 35.0% | |
| AGCTTTGCAAGTTCAATACA+TGG | - | chr1.4:17197448-17197467 | None:intergenic | 35.0% | |
| AGTAAATCGTAAACACACCA+TGG | - | chr1.4:17198060-17198079 | None:intergenic | 35.0% | |
| ATTCTGTTGATCATGCACAA+TGG | - | chr1.4:17196417-17196436 | None:intergenic | 35.0% | |
| ATTCTTTGGCGAAAAGATGA+GGG | - | chr1.4:17197522-17197541 | None:intergenic | 35.0% | |
| CAAAGAATATCCAGACTTCA+TGG | + | chr1.4:17197534-17197553 | MS.gene83045:CDS | 35.0% | |
| CAGTCATTCTCATGTAGTTA+AGG | + | chr1.4:17196242-17196261 | MS.gene83045:CDS | 35.0% | |
| CATGAAGTCTGGATATTCTT+TGG | - | chr1.4:17197536-17197555 | None:intergenic | 35.0% | |
| CATGATCCAATACAATAGGT+TGG | - | chr1.4:17196886-17196905 | None:intergenic | 35.0% | |
| CCGACTATATCTTTGGATAA+CGG | + | chr1.4:17195094-17195113 | MS.gene83045:CDS | 35.0% | |
| CCGTTATCCAAAGATATAGT+CGG | - | chr1.4:17195097-17195116 | None:intergenic | 35.0% | |
| CGACTATATCTTTGGATAAC+GGG | + | chr1.4:17195095-17195114 | MS.gene83045:CDS | 35.0% | |
| CTGAATCAGAAATCCTTAGT+GGG | + | chr1.4:17197797-17197816 | MS.gene83045:CDS | 35.0% | |
| CTTGCTCAACATGAAATCAA+AGG | - | chr1.4:17193856-17193875 | None:intergenic | 35.0% | |
| GAAAGAAATGGCTCAACATT+AGG | - | chr1.4:17196063-17196082 | None:intergenic | 35.0% | |
| GAAAGTAGAATTTCCAACAG+CGG | + | chr1.4:17194297-17194316 | MS.gene83045:intron | 35.0% | |
| GAAATAAAAATTGCCGCTGT+TGG | - | chr1.4:17194313-17194332 | None:intergenic | 35.0% | |
| GGAAAACTTGGTTCATTATG+AGG | + | chr1.4:17194745-17194764 | MS.gene83045:CDS | 35.0% | |
| GTTCATTATGAGGAAATCGA+GGG | + | chr1.4:17194755-17194774 | MS.gene83045:CDS | 35.0% | |
| GTTTGAACTTCTTATCGTCA+TGG | - | chr1.4:17193450-17193469 | None:intergenic | 35.0% | |
| TATGTCTTCTCTGATGGAAT+CGG | + | chr1.4:17195625-17195644 | MS.gene83045:CDS | 35.0% | |
| TATTCTTTGGCGAAAAGATG+AGG | - | chr1.4:17197523-17197542 | None:intergenic | 35.0% | |
| TCCAACACCTTTATTGTGTT+GGG | - | chr1.4:17194228-17194247 | None:intergenic | 35.0% | |
| TCCATCAGAGAAGACATATT+CGG | - | chr1.4:17195623-17195642 | None:intergenic | 35.0% | |
| TCTCTCCAAATTGCAACAAA+TGG | + | chr1.4:17194060-17194079 | MS.gene83045:intron | 35.0% | |
| TCTCTGTAATAGTTCTTCAG+AGG | - | chr1.4:17194611-17194630 | None:intergenic | 35.0% | |
| TGCAGCATCATTGAAAGAAA+TGG | - | chr1.4:17196075-17196094 | None:intergenic | 35.0% | |
| TGGAAATTCTACTTTCCTTG+TGG | - | chr1.4:17194293-17194312 | None:intergenic | 35.0% | |
| TTCGGAAAATCTCTGTTACT+AGG | - | chr1.4:17194719-17194738 | None:intergenic | 35.0% | |
| TTCTCATGTAGTTAAGGGTA+TGG | + | chr1.4:17196248-17196267 | MS.gene83045:CDS | 35.0% | |
| TTGCTCCATATGAATTATGG+TGG | + | chr1.4:17193556-17193575 | MS.gene83045:intron | 35.0% | |
| TTTGTAAGGATGAGTTAAGC+GGG | - | chr1.4:17194114-17194133 | None:intergenic | 35.0% | |
| ! | ACAGAGATTTTCCGAATTTC+AGG | + | chr1.4:17194723-17194742 | MS.gene83045:CDS | 35.0% |
| ! | ACCAAGTTTTCCCTGAAATT+CGG | - | chr1.4:17194737-17194756 | None:intergenic | 35.0% |
| ! | ACCATTTTCTAAGCTTTCCA+TGG | + | chr1.4:17198040-17198059 | MS.gene83045:CDS | 35.0% |
| ! | ATCACCTTTTTCTTGCAATC+CGG | + | chr1.4:17194799-17194818 | MS.gene83045:CDS | 35.0% |
| ! | ATCTATGCCATTTCTAAGGA+TGG | - | chr1.4:17195341-17195360 | None:intergenic | 35.0% |
| ! | ATGGATGCTAGTGTAGATTT+TGG | + | chr1.4:17193391-17193410 | MS.gene83045:intron | 35.0% |
| ! | ATTGGTTCAATTGTTCTAGG+TGG | - | chr1.4:17196848-17196867 | None:intergenic | 35.0% |
| ! | ATTTAGGGCATCAAAGTTGT+TGG | + | chr1.4:17196098-17196117 | MS.gene83045:CDS | 35.0% |
| ! | CAGAGATTTTCCGAATTTCA+GGG | + | chr1.4:17194724-17194743 | MS.gene83045:CDS | 35.0% |
| ! | CCACAAAAGTATACTTTGCA+TGG | - | chr1.4:17195151-17195170 | None:intergenic | 35.0% |
| ! | CCATGCAAAGTATACTTTTG+TGG | + | chr1.4:17195148-17195167 | MS.gene83045:CDS | 35.0% |
| ! | CGATATGTTGATGGAAATGA+CGG | - | chr1.4:17195204-17195223 | None:intergenic | 35.0% |
| ! | CGATTTGAGACATTAATCTC+TGG | - | chr1.4:17195175-17195194 | None:intergenic | 35.0% |
| ! | CTCAAGATAGCTATTTCACA+AGG | - | chr1.4:17193763-17193782 | None:intergenic | 35.0% |
| ! | GGACATCTACTTTGTTTGTT+GGG | + | chr1.4:17196808-17196827 | MS.gene83045:CDS | 35.0% |
| ! | TAAAGTATTCACAACTTGCC+AGG | + | chr1.4:17197041-17197060 | MS.gene83045:intron | 35.0% |
| ! | TGGATGCTAGTGTAGATTTT+GGG | + | chr1.4:17193392-17193411 | MS.gene83045:intron | 35.0% |
| ! | TTTTTCCTCAAAAAGGTCAC+AGG | + | chr1.4:17196367-17196386 | MS.gene83045:CDS | 35.0% |
| !! | GCAGTTGATTTTCCAAAAAC+CGG | + | chr1.4:17197478-17197497 | MS.gene83045:CDS | 35.0% |
| !! | TATATCTTTGGATAACGGGT+TGG | + | chr1.4:17195099-17195118 | MS.gene83045:CDS | 35.0% |
| !! | TCAAGGATATGTTGGTAACA+TGG | + | chr1.4:17197301-17197320 | MS.gene83045:intron | 35.0% |
| !! | TCCATTGGTTCAATTGTTCT+AGG | - | chr1.4:17196851-17196870 | None:intergenic | 35.0% |
| !!! | GATTTATAGGTGGTTTTGTC+AGG | - | chr1.4:17197565-17197584 | None:intergenic | 35.0% |
| AAACAACACAATCCACCATG+TGG | - | chr1.4:17196350-17196369 | None:intergenic | 40.0% | |
| AAAGATATAGTCGGTGATCG+AGG | - | chr1.4:17195088-17195107 | None:intergenic | 40.0% | |
| AAGGAGTGAAATCTATCGCA+CGG | - | chr1.4:17194655-17194674 | None:intergenic | 40.0% | |
| AATCGAGGGTCAATACACAT+TGG | + | chr1.4:17194769-17194788 | MS.gene83045:CDS | 40.0% | |
| AATCTGTAGAAGAATGCCGT+TGG | - | chr1.4:17193304-17193323 | None:intergenic | 40.0% | |
| ACAGTTATCACTGTACAAGC+TGG | - | chr1.4:17194138-17194157 | None:intergenic | 40.0% | |
| ACATCCGGATTGCAAGAAAA+AGG | - | chr1.4:17194806-17194825 | None:intergenic | 40.0% | |
| ACCGAATATGTCTTCTCTGA+TGG | + | chr1.4:17195619-17195638 | MS.gene83045:CDS | 40.0% | |
| AGATTCAACTAAGGCACATG+AGG | + | chr1.4:17195969-17195988 | MS.gene83045:CDS | 40.0% | |
| AGGAGAGTGGCTAAAAAATG+TGG | + | chr1.4:17195670-17195689 | MS.gene83045:CDS | 40.0% | |
| ATCACTCCCAGAATCTATAC+CGG | - | chr1.4:17197935-17197954 | None:intergenic | 40.0% | |
| ATGTCTTCTCTGATGGAATC+GGG | + | chr1.4:17195626-17195645 | MS.gene83045:CDS | 40.0% | |
| ATGTTTGCTCGTACAACAAC+TGG | + | chr1.4:17195427-17195446 | MS.gene83045:CDS | 40.0% | |
| CAATGATGCTGCAGACATTT+AGG | + | chr1.4:17196082-17196101 | MS.gene83045:CDS | 40.0% | |
| CATATGCAAAAGCTTCAGCT+TGG | + | chr1.4:17197959-17197978 | MS.gene83045:CDS | 40.0% | |
| CATCCATTCCCTTATGGAAT+CGG | - | chr1.4:17195461-17195480 | None:intergenic | 40.0% | |
| CCAAAAGGAAGAGCAATGAT+GGG | + | chr1.4:17196150-17196169 | MS.gene83045:CDS | 40.0% | |
| CCTATGGATGTAAAGCTCAA+AGG | - | chr1.4:17196930-17196949 | None:intergenic | 40.0% | |
| CCTTTGAGCTTTACATCCAT+AGG | + | chr1.4:17196927-17196946 | MS.gene83045:intron | 40.0% | |
| CTCCAACACCTTTATTGTGT+TGG | - | chr1.4:17194229-17194248 | None:intergenic | 40.0% | |
| CTTATCCACTCTTGATGTCA+AGG | + | chr1.4:17195888-17195907 | MS.gene83045:CDS | 40.0% | |
| CTTCATGCCCAACACAATAA+AGG | + | chr1.4:17194218-17194237 | MS.gene83045:intron | 40.0% | |
| CTTTATTGTGTTGGGCATGA+AGG | - | chr1.4:17194220-17194239 | None:intergenic | 40.0% | |
| GAACACATTCCTTCGCAATT+TGG | - | chr1.4:17193943-17193962 | None:intergenic | 40.0% | |
| GATTCCATAAGGGAATGGAT+GGG | + | chr1.4:17195460-17195479 | MS.gene83045:CDS | 40.0% | |
| GATTCGGATATGGAATTCGA+GGG | + | chr1.4:17197685-17197704 | MS.gene83045:CDS | 40.0% | |
| GCTAAATATGCTGCTAGACT+TGG | + | chr1.4:17195508-17195527 | MS.gene83045:CDS | 40.0% | |
| GGATCATGATGTTGAGATTG+AGG | + | chr1.4:17196898-17196917 | MS.gene83045:CDS | 40.0% | |
| GGATGAAGATGCGATTACTA+TGG | + | chr1.4:17197858-17197877 | MS.gene83045:CDS | 40.0% | |
| GGCTAAGGAGTCATATGATT+CGG | + | chr1.4:17197669-17197688 | MS.gene83045:CDS | 40.0% | |
| GGTATTTGAATTCCTTGAGG+AGG | - | chr1.4:17194845-17194864 | None:intergenic | 40.0% | |
| GGTTCATTATGAGGAAATCG+AGG | + | chr1.4:17194754-17194773 | MS.gene83045:CDS | 40.0% | |
| GTAACATGGTTTAATGGTGC+AGG | + | chr1.4:17197315-17197334 | MS.gene83045:intron | 40.0% | |
| GTTAATTCCTTGGTTCAGCA+CGG | + | chr1.4:17194884-17194903 | MS.gene83045:CDS | 40.0% | |
| TACATCCTTCACACTTGAAG+TGG | + | chr1.4:17197648-17197667 | MS.gene83045:CDS | 40.0% | |
| TATCTCTCTCCAAATTGCGA+AGG | + | chr1.4:17193931-17193950 | MS.gene83045:intron | 40.0% | |
| TATGGAATTCGAGGGCTTTA+TGG | + | chr1.4:17197693-17197712 | MS.gene83045:CDS | 40.0% | |
| TCACTCCTTGCAGTTGTATT+GGG | + | chr1.4:17194666-17194685 | MS.gene83045:CDS | 40.0% | |
| TCCAAAAGGAAGAGCAATGA+TGG | + | chr1.4:17196149-17196168 | MS.gene83045:CDS | 40.0% | |
| TCCGAATTTCAGGGAAAACT+TGG | + | chr1.4:17194733-17194752 | MS.gene83045:CDS | 40.0% | |
| TCTGTTATGAACCTGCAAGA+TGG | + | chr1.4:17195020-17195039 | MS.gene83045:CDS | 40.0% | |
| TGGAATTGCGACAAAAGACT+AGG | + | chr1.4:17196118-17196137 | MS.gene83045:CDS | 40.0% | |
| TTCACTCCTTGCAGTTGTAT+TGG | + | chr1.4:17194665-17194684 | MS.gene83045:CDS | 40.0% | |
| TTCTGCCCAACCTATTGTAT+TGG | + | chr1.4:17196877-17196896 | MS.gene83045:CDS | 40.0% | |
| TTCTTTGGCGAAAAGATGAG+GGG | - | chr1.4:17197521-17197540 | None:intergenic | 40.0% | |
| TTGGGATTGGATTGAGAAAG+TGG | + | chr1.4:17193410-17193429 | MS.gene83045:intron | 40.0% | |
| ! | AACTAAGGCACATGAGGTTT+TGG | + | chr1.4:17195975-17195994 | MS.gene83045:CDS | 40.0% |
| ! | ACGTGTTTCATTTGTTGACG+AGG | + | chr1.4:17195234-17195253 | MS.gene83045:CDS | 40.0% |
| ! | ATCTACCTGTGACCTTTTTG+AGG | - | chr1.4:17196375-17196394 | None:intergenic | 40.0% |
| ! | CTACAAGTTGGGAAATCTGA+TGG | + | chr1.4:17197756-17197775 | MS.gene83045:CDS | 40.0% |
| ! | GGAGTCATATGATTCGGATA+TGG | + | chr1.4:17197675-17197694 | MS.gene83045:CDS | 40.0% |
| ! | GGGACATCTACTTTGTTTGT+TGG | + | chr1.4:17196807-17196826 | MS.gene83045:CDS | 40.0% |
| ! | TCGATCACCGACTATATCTT+TGG | + | chr1.4:17195087-17195106 | MS.gene83045:CDS | 40.0% |
| ! | TGATTCGGATATGGAATTCG+AGG | + | chr1.4:17197684-17197703 | MS.gene83045:CDS | 40.0% |
| ! | TTCATTTGTTGACGAGGAGT+TGG | + | chr1.4:17195240-17195259 | MS.gene83045:CDS | 40.0% |
| !! | CAACACAATAAAGGTGTTGG+AGG | + | chr1.4:17194227-17194246 | MS.gene83045:intron | 40.0% |
| !! | CTCTGTATTTTGGGGAAAGA+TGG | + | chr1.4:17193372-17193391 | MS.gene83045:CDS | 40.0% |
| !! | GGAAATCTGATGGACTACTA+TGG | + | chr1.4:17197766-17197785 | MS.gene83045:CDS | 40.0% |
| !! | GTTTTGGACTTGATGTGTTC+TGG | + | chr1.4:17195991-17196010 | MS.gene83045:CDS | 40.0% |
| !! | TTTTGGCTGTCAGATCTCAA+AGG | + | chr1.4:17193342-17193361 | MS.gene83045:CDS | 40.0% |
| !!! | ACATTTTTTAGCCACTCTCC+TGG | - | chr1.4:17195671-17195690 | None:intergenic | 40.0% |
| !!! | CTGTACAAGCTGGTTTTGTA+AGG | - | chr1.4:17194128-17194147 | None:intergenic | 40.0% |
| !!! | GCTAGTGTAGATTTTGGGAT+TGG | + | chr1.4:17193397-17193416 | MS.gene83045:intron | 40.0% |
| AATGAGGATGCATTCGAGCA+TGG | + | chr1.4:17198107-17198126 | MS.gene83045:CDS | 45.0% | |
| ACATGGTTTAATGGTGCAGG+AGG | + | chr1.4:17197318-17197337 | MS.gene83045:intron | 45.0% | |
| ACGGATCCATTGCTTATCAG+GGG | - | chr1.4:17194636-17194655 | None:intergenic | 45.0% | |
| ACTGTCCTTGACATCAAGAG+TGG | - | chr1.4:17195896-17195915 | None:intergenic | 45.0% | |
| AGAAGGAGAAAGCCAGAATG+AGG | + | chr1.4:17198091-17198110 | MS.gene83045:CDS | 45.0% | |
| AGTTGCGTGAAAACTCGCTA+TGG | + | chr1.4:17195404-17195423 | MS.gene83045:CDS | 45.0% | |
| ATCTCCCATCCATTCCCTTA+TGG | - | chr1.4:17195467-17195486 | None:intergenic | 45.0% | |
| ATGCGATTACTATGGCTGTG+AGG | + | chr1.4:17197866-17197885 | MS.gene83045:CDS | 45.0% | |
| CACGGATCCATTGCTTATCA+GGG | - | chr1.4:17194637-17194656 | None:intergenic | 45.0% | |
| CGATTCCATAAGGGAATGGA+TGG | + | chr1.4:17195459-17195478 | MS.gene83045:CDS | 45.0% | |
| CTCAAGGAGATGCTTATCTG+TGG | + | chr1.4:17196030-17196049 | MS.gene83045:CDS | 45.0% | |
| CTTAGCCACTTCAAGTGTGA+AGG | - | chr1.4:17197656-17197675 | None:intergenic | 45.0% | |
| CTTCACACTTGAAGTGGCTA+AGG | + | chr1.4:17197654-17197673 | MS.gene83045:CDS | 45.0% | |
| GAGATTCCCCTGATAAGCAA+TGG | + | chr1.4:17194627-17194646 | MS.gene83045:CDS | 45.0% | |
| GGTCAATACACATTGGAGAG+AGG | + | chr1.4:17194776-17194795 | MS.gene83045:CDS | 45.0% | |
| TATGCCTTATGAAGCTCTCC+TGG | - | chr1.4:17197062-17197081 | None:intergenic | 45.0% | |
| TCTTTGGCGAAAAGATGAGG+GGG | - | chr1.4:17197520-17197539 | None:intergenic | 45.0% | |
| TGCAAAGACTGTGTGTGCAT+TGG | - | chr1.4:17197395-17197414 | None:intergenic | 45.0% | |
| TGGAAGAAAGTTTCAGTCGC+AGG | + | chr1.4:17198127-17198146 | MS.gene83045:CDS | 45.0% | |
| TGGGCAGAATCATACTCCAT+TGG | - | chr1.4:17196866-17196885 | None:intergenic | 45.0% | |
| TGTTCCGGAAGTGATCTAGA+CGG | + | chr1.4:17196785-17196804 | MS.gene83045:CDS | 45.0% | |
| TTCAAAACACGAACATCGCC+CGG | - | chr1.4:17196303-17196322 | None:intergenic | 45.0% | |
| ! | AGCTATTTCACAAGGCTCGA+TGG | - | chr1.4:17193755-17193774 | None:intergenic | 45.0% |
| ! | CAAGGTATTTCAACTGAGGG+TGG | + | chr1.4:17197619-17197638 | MS.gene83045:CDS | 45.0% |
| ! | CCCATCATTGCTCTTCCTTT+TGG | - | chr1.4:17196153-17196172 | None:intergenic | 45.0% |
| ! | GCCCAACACAATAAAGGTGT+TGG | + | chr1.4:17194224-17194243 | MS.gene83045:intron | 45.0% |
| ! | GCTAGACTTGGACAGTCTTT+TGG | + | chr1.4:17195520-17195539 | MS.gene83045:CDS | 45.0% |
| ! | TCAGGCTTTTCCATGAAGTC+TGG | - | chr1.4:17197547-17197566 | None:intergenic | 45.0% |
| !! | ACTTACCGCCGATTCCATAA+GGG | + | chr1.4:17195450-17195469 | MS.gene83045:CDS | 45.0% |
| !! | GTGGTACCGGTATAGATTCT+GGG | + | chr1.4:17197926-17197945 | MS.gene83045:CDS | 45.0% |
| !! | TAGAAGAATGCCGTTGGCTT+TGG | - | chr1.4:17193298-17193317 | None:intergenic | 45.0% |
| !!! | TGTTCGTGTTTTGAAAGCCG+TGG | + | chr1.4:17196308-17196327 | MS.gene83045:CDS | 45.0% |
| !!! | AACAAAATTTAAAATAAAAA+AGG | - | chr1.4:17193487-17193506 | None:intergenic | 5.0% |
| AAAAATCCCTGCTTGCACCC+GGG | + | chr1.4:17196282-17196301 | MS.gene83045:CDS | 50.0% | |
| AACCCAAATGCTGTGGCTAG+AGG | + | chr1.4:17194263-17194282 | MS.gene83045:intron | 50.0% | |
| ACCTAAGAGCTGCACTCTTG+TGG | - | chr1.4:17193901-17193920 | None:intergenic | 50.0% | |
| ACTGCATAGGCCATATCTCC+AGG | + | chr1.4:17194173-17194192 | MS.gene83045:intron | 50.0% | |
| CAATCCGGATGTTGTTCCCA+TGG | + | chr1.4:17194814-17194833 | MS.gene83045:CDS | 50.0% | |
| CAGTGACAACATCACAGACG+AGG | - | chr1.4:17195767-17195786 | None:intergenic | 50.0% | |
| CCACATCCAAACGAGTGTTC+CGG | + | chr1.4:17196770-17196789 | MS.gene83045:CDS | 50.0% | |
| CCATGTTTAACCTTCGCGTC+AGG | - | chr1.4:17195595-17195614 | None:intergenic | 50.0% | |
| CCATTCCCTTATGGAATCGG+CGG | - | chr1.4:17195458-17195477 | None:intergenic | 50.0% | |
| CCTGACGCGAAGGTTAAACA+TGG | + | chr1.4:17195592-17195611 | MS.gene83045:CDS | 50.0% | |
| CGATCTTTCAGCCATCTTGC+AGG | - | chr1.4:17195034-17195053 | None:intergenic | 50.0% | |
| CGTCTGTGATGTTGTCACTG+AGG | + | chr1.4:17195767-17195786 | MS.gene83045:CDS | 50.0% | |
| CTGAAACTCTAAGCGTCAGC+AGG | + | chr1.4:17195551-17195570 | MS.gene83045:CDS | 50.0% | |
| CTTGCCAGGAGAGCTTCATA+AGG | + | chr1.4:17197055-17197074 | MS.gene83045:intron | 50.0% | |
| GAAAAATCCCTGCTTGCACC+CGG | + | chr1.4:17196281-17196300 | MS.gene83045:CDS | 50.0% | |
| GACAACATCACAGACGAGGT+TGG | - | chr1.4:17195763-17195782 | None:intergenic | 50.0% | |
| GACTGCCCAATACAACTGCA+AGG | - | chr1.4:17194674-17194693 | None:intergenic | 50.0% | |
| GATATAGTCGGTGATCGAGG+CGG | - | chr1.4:17195085-17195104 | None:intergenic | 50.0% | |
| GCAACCATGGGAACAACATC+CGG | - | chr1.4:17194821-17194840 | None:intergenic | 50.0% | |
| GCACGGATCCATTGCTTATC+AGG | - | chr1.4:17194638-17194657 | None:intergenic | 50.0% | |
| GCCATATCTCCAGGCAATGT+GGG | + | chr1.4:17194182-17194201 | MS.gene83045:intron | 50.0% | |
| GCTCGAATGCATCCTCATTC+TGG | - | chr1.4:17198106-17198125 | None:intergenic | 50.0% | |
| GGATTTAGTCCCACATTGCC+TGG | - | chr1.4:17194194-17194213 | None:intergenic | 50.0% | |
| GGCTCAGACATTGCTTTAGC+AGG | - | chr1.4:17197427-17197446 | None:intergenic | 50.0% | |
| GGGTATAACTGCTGGGATAC+CGG | - | chr1.4:17197500-17197519 | None:intergenic | 50.0% | |
| GTTCCGGAAGTGATCTAGAC+GGG | + | chr1.4:17196786-17196805 | MS.gene83045:CDS | 50.0% | |
| TCAAAACACGAACATCGCCC+GGG | - | chr1.4:17196302-17196321 | None:intergenic | 50.0% | |
| TCACTTCCGGAACACTCGTT+TGG | - | chr1.4:17196779-17196798 | None:intergenic | 50.0% | |
| TCCCACATTGCCTGGAGATA+TGG | - | chr1.4:17194186-17194205 | None:intergenic | 50.0% | |
| TCTAGCCACAGCATTTGGGT+TGG | - | chr1.4:17194264-17194283 | None:intergenic | 50.0% | |
| TCTTGAACTTGCCAGGAGAG+TGG | + | chr1.4:17195657-17195676 | MS.gene83045:CDS | 50.0% | |
| TGAAGCCAACCCAAATGCTG+TGG | + | chr1.4:17194256-17194275 | MS.gene83045:intron | 50.0% | |
| TGCCATCCGCGTTTCAGATT+CGG | + | chr1.4:17195704-17195723 | MS.gene83045:CDS | 50.0% | |
| TGGAGATATGGCCTATGCAG+TGG | - | chr1.4:17194174-17194193 | None:intergenic | 50.0% | |
| TGGTTCATTGACGGTGGTAC+CGG | + | chr1.4:17197913-17197932 | MS.gene83045:CDS | 50.0% | |
| TGGTTTAATGGTGCAGGAGG+TGG | + | chr1.4:17197321-17197340 | MS.gene83045:intron | 50.0% | |
| TTCCGGAAGTGATCTAGACG+GGG | + | chr1.4:17196787-17196806 | MS.gene83045:CDS | 50.0% | |
| TTGTGTTGGGCATGAAGGAG+TGG | - | chr1.4:17194215-17194234 | None:intergenic | 50.0% | |
| TTTAATGGTGCAGGAGGTGG+AGG | + | chr1.4:17197324-17197343 | MS.gene83045:intron | 50.0% | |
| ! | AGATGAGGGGGTATAACTGC+TGG | - | chr1.4:17197508-17197527 | None:intergenic | 50.0% |
| ! | AGGAGTTGGTTCATTGACGG+TGG | + | chr1.4:17197907-17197926 | MS.gene83045:CDS | 50.0% |
| ! | CGTTTCAGATTCGGTATGGC+GGG | + | chr1.4:17195713-17195732 | MS.gene83045:CDS | 50.0% |
| ! | GATGAGGGGGTATAACTGCT+GGG | - | chr1.4:17197507-17197526 | None:intergenic | 50.0% |
| ! | GCCATACCGAATCTGAAACG+CGG | - | chr1.4:17195713-17195732 | None:intergenic | 50.0% |
| ! | GCGAGGAGTTGGTTCATTGA+CGG | + | chr1.4:17197904-17197923 | MS.gene83045:CDS | 50.0% |
| ! | GCGTTTCAGATTCGGTATGG+CGG | + | chr1.4:17195712-17195731 | MS.gene83045:CDS | 50.0% |
| ! | TACCGAATCTGAAACGCGGA+TGG | - | chr1.4:17195709-17195728 | None:intergenic | 50.0% |
| ! | TCCACAAGAGTGCAGCTCTT+AGG | + | chr1.4:17193897-17193916 | MS.gene83045:intron | 50.0% |
| ! | TCCGCGTTTCAGATTCGGTA+TGG | + | chr1.4:17195709-17195728 | MS.gene83045:CDS | 50.0% |
| !! | ACGGGTTGGTATATGTTCGC+AGG | + | chr1.4:17195113-17195132 | MS.gene83045:CDS | 50.0% |
| !! | ATTCGGTATGGCGGGTACAA+AGG | + | chr1.4:17195721-17195740 | MS.gene83045:CDS | 50.0% |
| !! | CGGGTTGGTATATGTTCGCA+GGG | + | chr1.4:17195114-17195133 | MS.gene83045:CDS | 50.0% |
| !! | GACTTACCGCCGATTCCATA+AGG | + | chr1.4:17195449-17195468 | MS.gene83045:CDS | 50.0% |
| !! | GAGGCGGATTATTTGCACTG+AGG | - | chr1.4:17195069-17195088 | None:intergenic | 50.0% |
| !! | GGTGGTACCGGTATAGATTC+TGG | + | chr1.4:17197925-17197944 | MS.gene83045:CDS | 50.0% |
| !!! | ACTGCTGGGATACCGGTTTT+TGG | - | chr1.4:17197493-17197512 | None:intergenic | 50.0% |
| AACTCCTCGCCTCTTTCCGT+AGG | - | chr1.4:17197894-17197913 | None:intergenic | 55.0% | |
| AAGACAGCCGTGCTGAACCA+AGG | - | chr1.4:17194894-17194913 | None:intergenic | 55.0% | |
| ACACTCGTTTGGATGTGGCC+TGG | - | chr1.4:17196768-17196787 | None:intergenic | 55.0% | |
| ACTCCTCGCCTCTTTCCGTA+GGG | - | chr1.4:17197893-17197912 | None:intergenic | 55.0% | |
| CCAAATGCTGTGGCTAGAGG+CGG | + | chr1.4:17194266-17194285 | MS.gene83045:intron | 55.0% | |
| CCGGAACACTCGTTTGGATG+TGG | - | chr1.4:17196773-17196792 | None:intergenic | 55.0% | |
| CCTTGAGGAGGAGCAACCAT+GGG | - | chr1.4:17194833-17194852 | None:intergenic | 55.0% | |
| CGCCTCTAGCCACAGCATTT+GGG | - | chr1.4:17194268-17194287 | None:intergenic | 55.0% | |
| CTATGGCTGTGAGGTCCCTA+CGG | + | chr1.4:17197875-17197894 | MS.gene83045:CDS | 55.0% | |
| GGCCATATCTCCAGGCAATG+TGG | + | chr1.4:17194181-17194200 | MS.gene83045:intron | 55.0% | |
| GTCCCCGTCTAGATCACTTC+CGG | - | chr1.4:17196792-17196811 | None:intergenic | 55.0% | |
| GTGCAAAGCTGGCACATCCA+CGG | - | chr1.4:17196328-17196347 | None:intergenic | 55.0% | |
| GTTCAGCACGGCTGTCTTTC+AGG | + | chr1.4:17194896-17194915 | MS.gene83045:CDS | 55.0% | |
| TACGGAAAGAGGCGAGGAGT+TGG | + | chr1.4:17197893-17197912 | MS.gene83045:CDS | 55.0% | |
| TCCACCATGTGGTGCAAAGC+TGG | - | chr1.4:17196339-17196358 | None:intergenic | 55.0% | |
| TCCTTGAGGAGGAGCAACCA+TGG | - | chr1.4:17194834-17194853 | None:intergenic | 55.0% | |
| TGTGAGGTCCCTACGGAAAG+AGG | + | chr1.4:17197882-17197901 | MS.gene83045:CDS | 55.0% | |
| TGTGCCAGCTTTGCACCACA+TGG | + | chr1.4:17196332-17196351 | MS.gene83045:CDS | 55.0% | |
| ! | TGGCGGGTACAAAGGAGTTG+TGG | + | chr1.4:17195729-17195748 | MS.gene83045:CDS | 55.0% |
| !! | CCGCCGATTCCATAAGGGAA+TGG | + | chr1.4:17195455-17195474 | MS.gene83045:CDS | 55.0% |
| ATCCTCCACGTGCACGGTTG+CGG | + | chr1.4:17193721-17193740 | MS.gene83045:intron | 60.0% | |
| CCCATGGTTGCTCCTCCTCA+AGG | + | chr1.4:17194830-17194849 | MS.gene83045:CDS | 60.0% | |
| CCGCCTCTAGCCACAGCATT+TGG | - | chr1.4:17194269-17194288 | None:intergenic | 60.0% | |
| GCCAGCTTTGCACCACATGG+TGG | + | chr1.4:17196335-17196354 | MS.gene83045:CDS | 60.0% | |
| AACATCGCCCGGGTGCAAGC+AGG | - | chr1.4:17196292-17196311 | None:intergenic | 65.0% | |
| ACATCGCCCGGGTGCAAGCA+GGG | - | chr1.4:17196291-17196310 | None:intergenic | 65.0% | |
| AGTCTCCGCAACCGTGCACG+TGG | - | chr1.4:17193729-17193748 | None:intergenic | 65.0% | |
| CCGGGTATCCTCCACGTGCA+CGG | + | chr1.4:17193715-17193734 | MS.gene83045:intron | 65.0% | |
| CCGTGCACGTGGAGGATACC+CGG | - | chr1.4:17193718-17193737 | None:intergenic | 65.0% | |
| GGTCCCTACGGAAAGAGGCG+AGG | + | chr1.4:17197887-17197906 | MS.gene83045:CDS | 65.0% | |
| GTGGCTAGAGGCGGACCACA+AGG | + | chr1.4:17194275-17194294 | MS.gene83045:intron | 65.0% | |
| CTCCGCAACCGTGCACGTGG+AGG | - | chr1.4:17193726-17193745 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 17193271 | 17198164 | 17193271 | ID=MS.gene83045 |
| chr1.4 | mRNA | 17193271 | 17198164 | 17193271 | ID=MS.gene83045.t1;Parent=MS.gene83045 |
| chr1.4 | exon | 17193271 | 17193402 | 17193271 | ID=MS.gene83045.t1.exon1;Parent=MS.gene83045.t1 |
| chr1.4 | CDS | 17193271 | 17193402 | 17193271 | ID=cds.MS.gene83045.t1;Parent=MS.gene83045.t1 |
| chr1.4 | exon | 17194545 | 17196388 | 17194545 | ID=MS.gene83045.t1.exon2;Parent=MS.gene83045.t1 |
| chr1.4 | CDS | 17194545 | 17196388 | 17194545 | ID=cds.MS.gene83045.t1;Parent=MS.gene83045.t1 |
| chr1.4 | exon | 17196769 | 17196919 | 17196769 | ID=MS.gene83045.t1.exon3;Parent=MS.gene83045.t1 |
| chr1.4 | CDS | 17196769 | 17196919 | 17196769 | ID=cds.MS.gene83045.t1;Parent=MS.gene83045.t1 |
| chr1.4 | exon | 17197337 | 17198164 | 17197337 | ID=MS.gene83045.t1.exon4;Parent=MS.gene83045.t1 |
| chr1.4 | CDS | 17197337 | 17198164 | 17197337 | ID=cds.MS.gene83045.t1;Parent=MS.gene83045.t1 |
| Gene Sequence |
| Protein sequence |
