AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene83087

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene83087.t1 MTR_1g031900 98.060 464 9 0 1 464 35 498 0.0 929
MS.gene83087.t1 MTR_1g031900 99.031 413 4 0 1 413 35 447 0.0 840
MS.gene83087.t1 MTR_5g078200 74.178 426 110 0 1 426 34 459 0.0 688
MS.gene83087.t1 MTR_5g078200 74.178 426 110 0 1 426 1 426 0.0 687
MS.gene83087.t1 MTR_3g065460 66.595 464 148 2 1 464 35 491 0.0 642
MS.gene83087.t1 MTR_4g132280 56.652 466 191 3 1 462 56 514 0.0 541
MS.gene83087.t1 MTR_8g085720 53.596 431 199 1 1 430 37 467 8.74e-171 489
MS.gene83087.t1 MTR_3g083580 52.048 415 196 2 1 414 37 449 5.01e-162 467
MS.gene83087.t1 MTR_5g085580 42.299 435 225 3 1 412 36 467 6.31e-119 356
MS.gene83087.t1 MTR_6g088885 41.244 434 243 3 1 425 38 468 8.49e-115 347
MS.gene83087.t1 MTR_1g056640 39.462 446 233 3 1 412 49 491 3.96e-113 342
MS.gene83087.t1 MTR_8g102340 41.667 420 228 3 48 461 52 460 1.38e-107 327
MS.gene83087.t1 MTR_8g012400 37.264 424 250 8 1 412 40 459 2.54e-91 285
MS.gene83087.t1 MTR_4g069940 36.941 425 251 4 1 412 40 460 8.45e-90 281
MS.gene83087.t1 MTR_7g053500 33.803 426 265 6 1 412 37 459 3.95e-87 274
MS.gene83087.t1 MTR_4g088155 35.198 429 257 7 1 412 34 458 1.32e-86 273
MS.gene83087.t1 MTR_3g116510 35.308 422 260 4 1 413 39 456 1.72e-84 267
MS.gene83087.t1 MTR_3g080410 42.089 316 179 2 1 315 37 349 7.83e-84 262
MS.gene83087.t1 MTR_1g022160 34.607 445 256 5 1 413 35 476 2.14e-83 265
MS.gene83087.t1 MTR_7g026340 37.972 424 237 10 1 409 34 446 8.68e-82 260
MS.gene83087.t1 MTR_1g022160 34.537 443 255 5 1 411 35 474 1.64e-81 260
MS.gene83087.t1 MTR_4g083500 36.000 450 252 11 1 422 55 496 2.51e-80 258
MS.gene83087.t1 MTR_8g012400 36.939 379 224 7 46 412 4 379 4.52e-79 251
MS.gene83087.t1 MTR_1g022160 34.174 436 252 5 1 404 35 467 9.49e-79 253
MS.gene83087.t1 MTR_7g053500 34.375 384 235 6 43 412 2 382 1.94e-76 244
MS.gene83087.t1 MTR_4g114850 40.764 314 182 2 1 313 37 347 2.15e-72 233
MS.gene83087.t1 MTR_4g114850 40.764 314 182 2 1 313 37 347 2.33e-72 233
MS.gene83087.t1 MTR_4g114850 40.764 314 182 2 1 313 37 347 7.38e-72 232
MS.gene83087.t1 MTR_4g010200 39.172 314 187 2 1 313 44 354 1.71e-71 231
MS.gene83087.t1 MTR_4g052970 36.943 314 193 3 1 313 40 349 5.46e-71 230
MS.gene83087.t1 MTR_1g007810 41.987 312 166 8 1 307 27 328 3.99e-70 227
MS.gene83087.t1 MTR_1g077990 40.256 313 175 5 1 309 42 346 2.25e-69 226
MS.gene83087.t1 MTR_4g084480 36.023 347 216 4 1 345 43 385 3.39e-67 221
MS.gene83087.t1 MTR_4g084480 38.019 313 189 3 1 312 36 344 7.18e-67 219
MS.gene83087.t1 MTR_4g084480 38.019 313 189 3 1 312 43 351 9.34e-67 219
MS.gene83087.t1 MTR_3g116510 36.111 324 195 3 98 413 3 322 5.26e-64 210
MS.gene83087.t1 MTR_1g010120 34.588 425 245 15 4 411 40 448 5.91e-63 211
MS.gene83087.t1 MTR_4g076255 38.710 310 172 7 1 309 36 328 4.39e-62 205
MS.gene83087.t1 MTR_4g076490 36.422 313 184 5 1 313 108 405 1.08e-61 207
MS.gene83087.t1 MTR_2g086530 35.897 312 193 4 1 311 19 324 1.43e-61 205
MS.gene83087.t1 MTR_2g019345 36.709 316 186 5 1 311 35 341 2.84e-61 205
MS.gene83087.t1 MTR_1g053320 33.485 439 254 16 4 419 44 467 2.84e-61 207
MS.gene83087.t1 MTR_1g022160 36.422 313 196 2 1 312 35 345 3.36e-61 205
MS.gene83087.t1 MTR_2g086530 35.897 312 193 4 1 311 40 345 3.77e-61 204
MS.gene83087.t1 MTR_4g076440 37.540 309 177 6 1 309 34 326 8.03e-61 202
MS.gene83087.t1 MTR_4g076430 37.864 309 176 6 1 309 34 326 8.84e-61 201
MS.gene83087.t1 MTR_3g108600 34.483 435 242 16 3 424 44 448 2.33e-59 202
MS.gene83087.t1 MTR_4g076470 37.793 299 170 6 1 299 34 316 2.60e-59 197
MS.gene83087.t1 MTR_8g092070 30.575 435 276 15 4 424 48 470 4.07e-59 204
MS.gene83087.t1 MTR_3g031770 34.579 428 239 15 4 412 41 446 2.03e-58 200
MS.gene83087.t1 MTR_7g085390 32.547 424 257 16 4 411 40 450 3.63e-57 196
MS.gene83087.t1 MTR_2g027560 33.017 421 257 14 4 411 42 450 7.98e-57 196
MS.gene83087.t1 MTR_4g112025 30.824 425 266 15 4 412 45 457 1.57e-56 196
MS.gene83087.t1 MTR_7g081350 35.484 310 187 7 1 309 38 335 2.53e-56 190
MS.gene83087.t1 MTR_4g076500 35.390 308 186 4 4 309 91 387 5.87e-56 191
MS.gene83087.t1 MTR_2g034480 37.143 315 185 7 1 313 38 341 3.27e-55 188
MS.gene83087.t1 MTR_4g124440 32.311 424 262 14 2 411 39 451 7.29e-55 191
MS.gene83087.t1 MTR_2g034470 36.508 315 187 7 1 313 6 309 9.95e-55 186
MS.gene83087.t1 MTR_2g034470 36.508 315 187 7 1 313 41 344 1.88e-54 186
MS.gene83087.t1 MTR_4g076570 33.445 299 190 3 1 299 33 322 2.14e-53 183
MS.gene83087.t1 MTR_6g032820 32.134 417 241 16 3 395 39 437 6.87e-53 184
MS.gene83087.t1 MTR_2g034440 36.842 304 179 7 1 302 33 325 2.10e-52 180
MS.gene83087.t1 MTR_3g095050 30.588 425 263 18 4 412 48 456 2.83e-51 181
MS.gene83087.t1 MTR_1g052430 33.110 299 191 4 1 299 43 332 3.97e-49 173
MS.gene83087.t1 MTR_7g081370 31.935 310 185 8 1 309 39 323 1.68e-43 156
MS.gene83087.t1 MTR_5g081720 33.667 300 183 9 14 307 59 348 5.45e-40 148
MS.gene83087.t1 MTR_4g134280 31.503 346 213 13 78 411 3 336 8.66e-39 144
MS.gene83087.t1 MTR_8g085390 48.454 97 45 2 326 418 29 124 8.26e-25 101
MS.gene83087.t1 MTR_8g089400 45.631 103 51 2 316 416 29 128 7.45e-24 97.8
MS.gene83087.t1 MTR_8g089400 45.631 103 51 2 316 416 49 148 1.69e-23 97.4
MS.gene83087.t1 MTR_4g079530 44.248 113 58 2 325 432 35 147 5.60e-22 93.2
MS.gene83087.t1 MTR_4g079530 47.727 88 46 0 325 412 35 122 8.51e-22 91.3
MS.gene83087.t1 MTR_5g097420 45.882 85 46 0 325 409 28 112 2.80e-21 89.4
MS.gene83087.t1 MTR_4g083070 46.154 91 47 2 327 416 21 110 3.43e-20 88.6
MS.gene83087.t1 MTR_7g111600 48.837 86 43 1 327 412 160 244 2.18e-19 87.8
MS.gene83087.t1 MTR_7g111600 48.837 86 43 1 327 412 160 244 3.36e-19 88.6
MS.gene83087.t1 MTR_7g111600 48.837 86 43 1 327 412 160 244 4.03e-19 88.2
MS.gene83087.t1 MTR_8g085440 39.326 89 53 1 324 412 29 116 9.16e-19 82.4
MS.gene83087.t1 MTR_3g048280 40.741 108 63 1 304 411 89 195 2.14e-18 84.0
MS.gene83087.t1 MTR_4g133735 44.706 85 47 0 327 411 28 112 3.84e-18 80.5
MS.gene83087.t1 MTR_2g049670 50.588 85 40 2 327 411 158 240 6.10e-18 85.1
MS.gene83087.t1 MTR_5g091650 43.011 93 52 1 322 414 103 194 6.26e-18 82.4
MS.gene83087.t1 MTR_5g091650 43.011 93 52 1 322 414 103 194 8.42e-18 83.6
MS.gene83087.t1 MTR_4g133730 41.176 85 50 0 327 411 28 112 5.04e-17 77.4
MS.gene83087.t1 MTR_4g109490 45.882 85 44 2 327 411 24 106 9.46e-17 79.3
MS.gene83087.t1 MTR_1g084820 48.193 83 41 2 325 407 418 498 9.55e-17 83.2
MS.gene83087.t1 MTR_1g084820 48.193 83 41 2 325 407 418 498 1.10e-16 83.2
MS.gene83087.t1 MTR_2g072500 41.379 87 49 1 325 411 6 90 1.82e-16 75.1
MS.gene83087.t1 MTR_5g015720 44.318 88 48 1 325 411 327 414 2.56e-16 81.3
MS.gene83087.t1 MTR_1g116870 42.353 85 48 1 327 411 276 359 3.34e-16 80.5
MS.gene83087.t1 MTR_8g085400 44.444 81 41 2 325 405 31 107 6.64e-16 74.3
MS.gene83087.t1 MTR_8g085420 37.349 83 51 1 325 407 30 111 1.37e-15 73.9
MS.gene83087.t1 MTR_5g044530 38.889 90 52 2 327 414 22 110 3.87e-15 75.5
MS.gene83087.t1 MTR_8g088120 50.000 76 37 1 339 414 60 134 6.29e-15 74.3
MS.gene83087.t1 MTR_3g082080 44.304 79 43 1 327 405 157 234 1.46e-14 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene83087.t1 AT2G01630 75.730 445 107 1 1 444 34 478 0.0 703
MS.gene83087.t1 AT2G01630 78.025 405 89 0 1 405 34 438 0.0 669
MS.gene83087.t1 AT1G66250 68.696 460 135 5 1 454 43 499 0.0 654
MS.gene83087.t1 AT2G01630 78.151 357 78 0 1 357 34 390 0.0 585
MS.gene83087.t1 AT1G11820 61.305 429 163 1 3 428 57 485 0.0 570
MS.gene83087.t1 AT1G11820 61.787 403 154 0 3 405 57 459 0.0 542
MS.gene83087.t1 AT3G13560 52.778 432 201 2 1 430 37 467 1.41e-158 459
MS.gene83087.t1 AT3G13560 52.778 432 201 2 1 430 37 467 1.41e-158 459
MS.gene83087.t1 AT3G13560 52.778 432 201 2 1 430 37 467 1.41e-158 459
MS.gene83087.t1 AT3G13560 52.778 432 201 2 1 430 37 467 1.41e-158 459
MS.gene83087.t1 AT3G13560 52.778 432 201 2 1 430 37 467 1.41e-158 459
MS.gene83087.t1 AT1G11820 62.420 314 118 0 3 316 57 370 2.69e-144 418
MS.gene83087.t1 AT2G05790 43.021 437 221 3 1 412 36 469 2.62e-120 360
MS.gene83087.t1 AT4G26830 41.568 421 233 4 1 412 40 456 4.03e-115 346
MS.gene83087.t1 AT5G56590 38.947 475 266 8 1 464 37 498 4.05e-115 348
MS.gene83087.t1 AT4G26830 41.568 421 233 4 1 412 36 452 4.05e-115 346
MS.gene83087.t1 AT5G55180 40.662 423 237 3 1 412 38 457 8.06e-114 343
MS.gene83087.t1 AT4G29360 38.833 497 265 6 1 463 38 529 4.79e-113 343
MS.gene83087.t1 AT4G29360 38.833 497 265 6 1 463 48 539 6.29e-113 343
MS.gene83087.t1 AT5G55180 40.528 417 234 3 1 406 38 451 1.05e-109 332
MS.gene83087.t1 AT2G16230 38.152 422 250 4 1 415 36 453 2.07e-98 305
MS.gene83087.t1 AT4G34480 39.904 416 242 4 1 412 37 448 1.01e-96 300
MS.gene83087.t1 AT5G24318 38.389 422 238 9 1 409 41 453 1.10e-94 293
MS.gene83087.t1 AT5G24318 38.278 418 236 9 1 405 41 449 4.12e-92 287
MS.gene83087.t1 AT3G07320 36.235 425 254 8 1 412 36 456 4.13e-88 277
MS.gene83087.t1 AT3G23770 35.897 429 254 6 1 412 48 472 1.29e-83 266
MS.gene83087.t1 AT3G55430 35.934 423 247 12 1 411 39 449 5.06e-81 258
MS.gene83087.t1 AT4G14080 33.568 426 265 7 1 412 53 474 1.76e-80 258
MS.gene83087.t1 AT4G34480 41.298 339 191 4 78 412 3 337 2.44e-77 247
MS.gene83087.t1 AT5G24318 39.077 325 177 6 99 411 1 316 6.15e-74 235
MS.gene83087.t1 AT2G26600 38.710 310 186 2 1 309 45 351 1.41e-71 231
MS.gene83087.t1 AT1G32860 39.617 313 180 5 1 309 40 347 3.09e-70 229
MS.gene83087.t1 AT5G24318 39.039 333 191 7 1 330 41 364 7.59e-69 224
MS.gene83087.t1 AT3G15800 38.413 315 189 3 1 313 54 365 1.55e-68 224
MS.gene83087.t1 AT5G58090 34.515 423 251 14 4 412 36 446 3.27e-67 223
MS.gene83087.t1 AT2G27500 35.032 314 200 2 1 313 40 350 4.82e-67 219
MS.gene83087.t1 AT2G39640 34.541 414 253 12 4 412 43 443 8.69e-67 224
MS.gene83087.t1 AT2G39640 40.909 88 51 1 327 414 460 546 3.37e-16 81.6
MS.gene83087.t1 AT2G27500 35.032 314 200 2 1 313 40 350 1.29e-66 219
MS.gene83087.t1 AT4G18340 37.695 321 195 3 1 320 45 361 1.16e-65 216
MS.gene83087.t1 AT5G42100 38.730 315 185 5 1 311 38 348 2.16e-65 216
MS.gene83087.t1 AT5G42100 38.730 315 185 5 1 311 38 348 2.25e-65 216
MS.gene83087.t1 AT4G18340 37.695 321 195 3 1 320 45 361 4.79e-65 215
MS.gene83087.t1 AT4G16260 38.535 314 182 6 1 314 6 308 5.75e-65 212
MS.gene83087.t1 AT4G16260 38.535 314 182 6 1 314 35 337 1.16e-64 212
MS.gene83087.t1 AT1G30080 40.000 300 175 3 1 299 47 342 5.84e-64 212
MS.gene83087.t1 AT4G34480 39.103 312 186 2 1 311 37 345 5.88e-64 211
MS.gene83087.t1 AT1G30080 40.000 300 175 3 1 299 47 342 1.10e-63 212
MS.gene83087.t1 AT3G57270 38.782 312 180 5 1 311 38 339 1.41e-63 209
MS.gene83087.t1 AT4G31140 33.962 424 248 15 4 411 41 448 5.03e-62 209
MS.gene83087.t1 AT3G61810 37.658 316 184 6 1 312 66 372 1.24e-61 205
MS.gene83087.t1 AT5G42720 36.943 314 193 3 1 312 37 347 4.83e-61 206
MS.gene83087.t1 AT2G19440 33.882 425 251 17 4 412 35 445 2.57e-60 205
MS.gene83087.t1 AT2G19440 33.882 425 251 17 4 412 35 445 2.57e-60 205
MS.gene83087.t1 AT5G20870 34.571 431 246 16 4 412 44 460 4.90e-60 204
MS.gene83087.t1 AT3G24330 32.941 425 257 16 4 412 53 465 2.96e-58 200
MS.gene83087.t1 AT3G04010 32.394 426 257 16 4 412 47 458 7.30e-58 199
MS.gene83087.t1 AT2G26600 39.922 258 150 3 54 309 3 257 7.84e-58 193
MS.gene83087.t1 AT5G18220 31.850 427 259 14 4 412 44 456 1.07e-57 198
MS.gene83087.t1 AT2G27500 35.273 275 174 2 40 313 1 272 2.94e-56 189
MS.gene83087.t1 AT1G64760 32.867 429 250 18 4 412 39 449 1.29e-55 192
MS.gene83087.t1 AT1G64760 32.867 429 250 18 4 412 39 449 1.29e-55 192
MS.gene83087.t1 AT3G57260 36.013 311 184 6 1 311 43 338 1.72e-55 188
MS.gene83087.t1 AT3G57260 36.013 311 184 6 1 311 59 354 2.77e-55 188
MS.gene83087.t1 AT5G64790 30.588 425 267 15 3 412 41 452 4.28e-54 188
MS.gene83087.t1 AT4G17180 33.875 431 233 19 4 411 39 440 1.65e-53 186
MS.gene83087.t1 AT5G58480 33.492 421 251 14 4 411 40 444 2.64e-51 181
MS.gene83087.t1 AT3G55780 33.962 318 201 7 3 317 48 359 2.33e-50 176
MS.gene83087.t1 AT3G57240 35.505 307 182 8 5 311 50 340 5.12e-50 174
MS.gene83087.t1 AT1G77780 32.686 309 197 6 1 309 35 332 8.34e-49 171
MS.gene83087.t1 AT3G46570 35.913 323 193 10 1 318 38 351 2.76e-47 167
MS.gene83087.t1 AT5G20390 32.907 313 193 8 1 309 44 343 6.60e-46 163
MS.gene83087.t1 AT5G20340 33.121 314 191 9 1 309 54 353 4.14e-45 161
MS.gene83087.t1 AT5G20330 32.907 313 193 8 1 309 45 344 1.30e-44 159
MS.gene83087.t1 AT1G33220 31.488 289 185 5 1 287 45 322 6.97e-43 154
MS.gene83087.t1 AT5G20560 31.271 291 184 6 1 287 45 323 2.56e-38 142
MS.gene83087.t1 AT1G77790 28.939 311 209 7 1 309 41 341 1.03e-36 138
MS.gene83087.t1 AT3G58100 40.816 98 58 0 325 422 39 136 2.20e-23 97.4
MS.gene83087.t1 AT4G05430 48.315 89 46 0 326 414 47 135 2.20e-23 97.1
MS.gene83087.t1 AT4G05430 46.316 95 51 0 326 420 22 116 2.30e-23 95.9
MS.gene83087.t1 AT3G58100 40.816 98 58 0 325 422 115 212 7.03e-23 97.8
MS.gene83087.t1 AT5G35740 44.086 93 51 1 320 411 23 115 1.14e-22 93.2
MS.gene83087.t1 AT4G13600 43.269 104 53 2 327 425 61 163 1.94e-22 96.3
MS.gene83087.t1 AT5G67460 25.594 379 237 12 35 411 42 377 2.44e-22 99.0
MS.gene83087.t1 AT2G30933 48.315 89 45 1 324 412 79 166 3.35e-21 92.4
MS.gene83087.t1 AT1G66870 42.529 87 50 0 325 411 51 137 3.40e-21 89.7
MS.gene83087.t1 AT1G66870 42.529 87 50 0 325 411 24 110 4.64e-21 88.6
MS.gene83087.t1 AT5G67460 25.131 382 223 12 35 405 42 371 1.25e-20 94.0
MS.gene83087.t1 AT4G05430 50.000 80 40 0 326 405 47 126 1.49e-20 87.8
MS.gene83087.t1 AT1G29380 48.889 90 45 1 327 416 148 236 1.88e-20 91.3
MS.gene83087.t1 AT2G04910 47.059 85 45 0 327 411 15 99 2.05e-20 86.7
MS.gene83087.t1 AT1G66852 42.529 87 49 1 325 411 24 109 4.56e-20 85.9
MS.gene83087.t1 AT1G29380 49.412 85 42 1 327 411 148 231 4.69e-20 91.3
MS.gene83087.t1 AT5G61130 45.977 87 46 1 326 412 20 105 6.85e-20 88.2
MS.gene83087.t1 AT1G09460 51.685 89 40 2 323 411 133 218 8.14e-20 90.5
MS.gene83087.t1 AT1G18650 41.304 92 53 1 323 414 17 107 1.00e-19 87.0
MS.gene83087.t1 AT1G18650 42.697 89 50 1 326 414 20 107 1.03e-19 85.5
MS.gene83087.t1 AT5G63240 42.529 87 48 1 327 411 40 126 2.07e-18 81.6
MS.gene83087.t1 AT2G30933 46.341 82 43 1 324 405 79 159 4.70e-18 81.6
MS.gene83087.t1 AT2G30933 46.341 82 43 1 324 405 79 159 4.70e-18 81.6
MS.gene83087.t1 AT2G04910 45.570 79 43 0 327 405 15 93 1.25e-17 79.3
MS.gene83087.t1 AT1G29380 47.561 82 42 1 327 408 148 228 1.40e-17 82.0
MS.gene83087.t1 AT1G29380 47.561 82 42 1 327 408 148 228 1.40e-17 82.0
MS.gene83087.t1 AT1G78520 36.893 103 63 1 309 411 14 114 3.12e-17 77.8
MS.gene83087.t1 AT4G16165 33.962 106 67 1 306 411 8 110 3.48e-17 77.8
MS.gene83087.t1 AT2G43670 35.165 91 57 1 321 411 29 117 4.25e-16 75.1
MS.gene83087.t1 AT5G63250 39.080 87 51 1 327 411 42 128 6.64e-16 74.7
MS.gene83087.t1 AT5G63225 38.202 89 54 1 323 411 21 108 1.21e-15 73.2
MS.gene83087.t1 AT1G66855 34.483 87 57 0 325 411 24 110 1.91e-15 72.8
MS.gene83087.t1 AT4G09465 34.831 89 57 1 323 411 27 114 7.51e-15 71.2
MS.gene83087.t1 AT4G09462 30.556 108 74 1 304 411 6 112 8.17e-15 70.9
MS.gene83087.t1 AT4G09467 34.831 89 57 1 323 411 27 114 8.77e-15 70.9
MS.gene83087.t1 AT4G09464 34.831 89 57 1 323 411 27 114 8.77e-15 70.9
MS.gene83087.t1 AT4G09090 36.471 85 53 1 327 411 31 114 1.09e-14 70.9
MS.gene83087.t1 AT5G08000 43.333 90 50 1 323 412 17 105 3.68e-14 71.6
MS.gene83087.t1 AT1G79480 38.202 89 54 1 323 411 307 394 4.63e-14 74.3
MS.gene83087.t1 AT2G03505 34.343 99 62 2 326 422 20 117 4.74e-14 68.9
MS.gene83087.t1 AT5G08000 41.053 95 55 1 318 412 31 124 4.86e-14 71.6
MS.gene83087.t1 AT1G79480 38.202 89 54 1 323 411 306 393 4.95e-14 73.9
MS.gene83087.t1 AT4G09466 34.831 89 57 1 323 411 27 114 5.26e-14 68.9
MS.gene83087.t1 AT2G03505 32.979 94 60 2 323 414 17 109 2.53e-13 68.6
MS.gene83087.t1 AT2G03505 32.979 94 60 2 323 414 17 109 2.53e-13 68.6
MS.gene83087.t1 AT2G03505 32.979 94 60 2 323 414 17 109 2.53e-13 68.6
MS.gene83087.t1 AT2G42930 42.500 80 44 2 327 406 40 117 2.93e-13 67.4
MS.gene83087.t1 AT1G69295 38.043 92 55 2 317 408 7 96 3.67e-12 66.2
MS.gene83087.t1 AT1G69295 39.535 86 50 2 323 408 17 100 5.33e-12 65.9
MS.gene83087.t1 AT5G63230 32.584 89 59 1 323 411 22 109 2.63e-11 60.8
MS.gene83087.t1 AT1G13830 37.179 78 45 2 327 404 35 108 3.46e-11 63.2
MS.gene83087.t1 AT1G13830 37.179 78 45 2 327 404 21 94 4.76e-11 62.4
MS.gene83087.t1 AT5G53600 30.000 90 61 1 322 411 24 111 5.45e-11 60.1

Find 108 sgRNAs with CRISPR-Local

Find 159 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGACTCGGTGACTAAAAT+AGG 0.167762 1.2:+16666982 None:intergenic
CTATCGACAGCTTCCTTATT+TGG 0.241028 1.2:+16667093 None:intergenic
TTGTAGGTGTTGGCATTATC+AGG 0.278497 1.2:+16666919 None:intergenic
CCAATGCAACTGCCGCGAAT+TGG 0.283543 1.2:-16667494 MS.gene83087:CDS
CCGTCCCTTACCGCCAAATA+AGG 0.300682 1.2:-16667106 MS.gene83087:CDS
GCTATCAACTCCACTGATTC+AGG 0.315340 1.2:-16665352 MS.gene83087:CDS
GATTGCATGTAATCATAATA+AGG 0.334360 1.2:+16667162 None:intergenic
ATCTAGAGGGATTACATCAT+TGG 0.345204 1.2:+16667140 None:intergenic
GGAGAACAATCCACCTTTCC+TGG 0.346483 1.2:+16666610 None:intergenic
ATTCCAAGTAGCTCGTTGTT+AGG 0.363288 1.2:+16667525 None:intergenic
ACGAGAACAGGAGCTGCATT+TGG 0.363577 1.2:+16667390 None:intergenic
CTTCTTGCACTTGCCAAGAC+TGG 0.364119 1.2:-16667570 MS.gene83087:CDS
CTTGATTGGGCTTGTGGGCC+AGG 0.365019 1.2:-16666628 MS.gene83087:CDS
ACATTCCTTACTTGGATTTG+TGG 0.367485 1.2:+16666453 None:intergenic
CACGGTTCCTGTATATTTCC+AGG 0.374026 1.2:-16665861 MS.gene83087:CDS
TGATACAGGCAGCACTTGAT+TGG 0.377908 1.2:-16666642 MS.gene83087:CDS
GTCCGGCATCTGAAAGCAAT+TGG 0.378013 1.2:-16666789 MS.gene83087:CDS
CAGCACTTGATTGGGCTTGT+GGG 0.390346 1.2:-16666633 MS.gene83087:CDS
GCAGCACTTGATTGGGCTTG+TGG 0.398398 1.2:-16666634 MS.gene83087:CDS
ACAGTGACTTTAGGTTGTTT+AGG 0.401362 1.2:+16666856 None:intergenic
TCCGGCATCTGAAAGCAATT+GGG 0.404115 1.2:-16666788 MS.gene83087:CDS
CGGCTCGGACGAACCACCTT+TGG 0.407721 1.2:+16666951 None:intergenic
CCAATTCGCGGCAGTTGCAT+TGG 0.413327 1.2:+16667494 None:intergenic
CAATGCAACTGCCGCGAATT+GGG 0.413704 1.2:-16667493 MS.gene83087:CDS
CTCGGACGAACCACCTTTGG+AGG 0.415693 1.2:+16666954 None:intergenic
GAATTGATATCATACCTTCC+TGG 0.418808 1.2:+16665843 None:intergenic
AAGTGCTGTGCCGTTTATCT+TGG 0.419890 1.2:+16665381 None:intergenic
AATTACTTGGATTCCAGTCT+TGG 0.422533 1.2:+16667557 None:intergenic
TCTTAGCGACACAAAACGTT+TGG 0.425096 1.2:+16666683 None:intergenic
CTGACTCGGTGACTAAAATA+GGG 0.425659 1.2:+16666983 None:intergenic
CAGAAGATGGATAAATCTCC+TGG 0.425719 1.2:-16666511 MS.gene83087:CDS
CCCCAATTGCTTTCAGATGC+CGG 0.430251 1.2:+16666787 None:intergenic
GCCACGGTTTCTGTTGGACT+TGG 0.430365 1.2:+16667651 None:intergenic
AGCTTCCTTATTTGGCGGTA+AGG 0.435749 1.2:+16667101 None:intergenic
CGAGAACAGGAGCTGCATTT+GGG 0.438661 1.2:+16667391 None:intergenic
GTTCCTAACAACGAGCTACT+TGG 0.446287 1.2:-16667528 MS.gene83087:CDS
TGGCCAACCGTGTTCTGAAC+CGG 0.451498 1.2:-16666578 MS.gene83087:CDS
GATTGTTCTCCTTTGTTGCA+TGG 0.453373 1.2:-16666598 MS.gene83087:CDS
TGCAAGAAGCATGGATTTGT+CGG 0.455001 1.2:+16667584 None:intergenic
ACCCTACACTTGACCGGTGC+TGG 0.463032 1.2:-16666733 MS.gene83087:CDS
GCATGTGCAACTACATTATC+CGG 0.464933 1.2:+16666559 None:intergenic
GATACAGGCAGCACTTGATT+GGG 0.465171 1.2:-16666641 MS.gene83087:CDS
TGGGAAAGAGTCGAGTATGA+TGG 0.470753 1.2:+16667284 None:intergenic
GAATCAGTGGAGTTGATAGC+AGG 0.470964 1.2:+16665355 None:intergenic
CCGAATGAGATTACTGTTGT+AGG 0.474772 1.2:+16666903 None:intergenic
AGAAGGGCCACGGTTTCTGT+TGG 0.476649 1.2:+16667645 None:intergenic
TAATGCTTATTATCAGAAGA+TGG 0.479937 1.2:-16666524 MS.gene83087:CDS
TTTCAATCGAACTTGGGATC+CGG 0.485550 1.2:-16667247 MS.gene83087:CDS
AGTATGATGGAAGTAGAAAG+TGG 0.486263 1.2:+16667297 None:intergenic
TACGTACTAACAGTGACTTT+AGG 0.488181 1.2:+16666847 None:intergenic
TTGGGCTTGTGGGCCAGGAA+AGG 0.489444 1.2:-16666623 MS.gene83087:CDS
TAGGAACAGAGACAATTACT+TGG 0.492995 1.2:+16667544 None:intergenic
GTCAAGTGTAGGGTATAAAC+CGG 0.493605 1.2:+16666742 None:intergenic
ATACCTTCCTGGAAATATAC+AGG 0.498642 1.2:+16665854 None:intergenic
GGCTTGTGGGCCAGGAAAGG+TGG 0.503432 1.2:-16666620 MS.gene83087:CDS
TCGACAGCTTCCTTATTTGG+CGG 0.504721 1.2:+16667096 None:intergenic
TGCTGATAGTAAGATGATAC+AGG 0.508115 1.2:-16666656 MS.gene83087:CDS
TATAACGAAGACTTGAGATC+AGG 0.508228 1.2:-16666811 MS.gene83087:CDS
GCATTATCAGGAGTTGCGTC+CGG 0.508802 1.2:+16666931 None:intergenic
ATGGCAGTAATGTTGGTTGA+AGG 0.510808 1.2:+16667444 None:intergenic
CGGAATAGAGCATAATCTAG+AGG 0.515329 1.2:+16667126 None:intergenic
GCTTCCTTATTTGGCGGTAA+GGG 0.518907 1.2:+16667102 None:intergenic
AACAACGAGCTACTTGGAAT+CGG 0.520085 1.2:-16667522 MS.gene83087:CDS
CGAAGACTTGAGATCAGGTC+CGG 0.520815 1.2:-16666806 MS.gene83087:CDS
CAAAGGTGGTTCGTCCGAGC+CGG 0.522183 1.2:-16666950 MS.gene83087:CDS
ATCAGGAGTTGCGTCCGGCT+CGG 0.523091 1.2:+16666936 None:intergenic
CCTTATTTGGCGGTAAGGGA+CGG 0.524201 1.2:+16667106 None:intergenic
CCTACAACAGTAATCTCATT+CGG 0.529782 1.2:-16666903 MS.gene83087:CDS
TGGGAGTGATGTTAAGACTT+CGG 0.531927 1.2:+16667410 None:intergenic
CACGGTTGGCCATGCAACAA+AGG 0.540609 1.2:+16666589 None:intergenic
TGTAGCGCAGATACGAGAAC+AGG 0.543313 1.2:+16667378 None:intergenic
AGAAACCGTGGCCCTTCTCA+AGG 0.545874 1.2:-16667640 MS.gene83087:CDS
TAGTGCAAGAATCATATAGC+TGG 0.546028 1.2:+16665294 None:intergenic
TTAAGTAAAGGTGACATGAC+CGG 0.552531 1.2:+16667228 None:intergenic
ACCAGCACCGGTCAAGTGTA+GGG 0.558763 1.2:+16666732 None:intergenic
CGTCAAAGAGTCTCACATGT+TGG 0.559706 1.2:+16667607 None:intergenic
GAGATTACTGTTGTAGGTGT+TGG 0.559723 1.2:+16666909 None:intergenic
TTGAGCCTTGAGAAGGGCCA+CGG 0.560237 1.2:+16667635 None:intergenic
GACAGCTATGGCAGTAATGT+TGG 0.560252 1.2:+16667437 None:intergenic
CCGGCATCTGAAAGCAATTG+GGG 0.560288 1.2:-16666787 MS.gene83087:CDS
GTTTATACCCTACACTTGAC+CGG 0.562480 1.2:-16666739 MS.gene83087:CDS
CTTGGCAAGTGCAAGAAGCA+TGG 0.563554 1.2:+16667575 None:intergenic
TGCAAATACAGTACCAGCAC+CGG 0.565949 1.2:+16666720 None:intergenic
TTTGGAGGGCCATCCTGACT+CGG 0.571401 1.2:+16666969 None:intergenic
TGGCAGTAATGTTGGTTGAA+GGG 0.577621 1.2:+16667445 None:intergenic
CCTGGGAGTTGTGATTTCAA+AGG 0.579529 1.2:-16666493 MS.gene83087:CDS
TATCCGGTTCAGAACACGGT+TGG 0.583788 1.2:+16666575 None:intergenic
ATTACGAGCAACCCAATTCG+CGG 0.586868 1.2:+16667482 None:intergenic
GACTTCGGAACCGACAGCTA+TGG 0.591858 1.2:+16667425 None:intergenic
TGAAGAAGAGCCTGAATCAG+TGG 0.595089 1.2:+16665342 None:intergenic
TACCAGCACCGGTCAAGTGT+AGG 0.597746 1.2:+16666731 None:intergenic
GTTCCTGTATATTTCCAGGA+AGG 0.604835 1.2:-16665857 MS.gene83087:intron
TCGGACGAACCACCTTTGGA+GGG 0.606238 1.2:+16666955 None:intergenic
ACATTATCCGGTTCAGAACA+CGG 0.606649 1.2:+16666571 None:intergenic
TCAGGATGGCCCTCCAAAGG+TGG 0.607905 1.2:-16666964 MS.gene83087:CDS
AACATTACTGCCATAGCTGT+CGG 0.608612 1.2:-16667435 MS.gene83087:CDS
GAGTCAGGATGGCCCTCCAA+AGG 0.612295 1.2:-16666967 MS.gene83087:CDS
TCTTCACAATACTACAATGG+TGG 0.617627 1.2:-16665325 MS.gene83087:CDS
TTCCTTACTTGGATTTGTGG+TGG 0.620716 1.2:+16666456 None:intergenic
AATCAGTGGAGTTGATAGCA+GGG 0.627452 1.2:+16665356 None:intergenic
CCTTTGAAATCACAACTCCC+AGG 0.628585 1.2:+16666493 None:intergenic
GGAATAGAGCATAATCTAGA+GGG 0.633653 1.2:+16667127 None:intergenic
AGAAGATGGATAAATCTCCT+GGG 0.636620 1.2:-16666510 MS.gene83087:CDS
TCTTCTTCACAATACTACAA+TGG 0.644820 1.2:-16665328 MS.gene83087:CDS
ATCAGTGGAGTTGATAGCAG+GGG 0.657358 1.2:+16665357 None:intergenic
GCCAAGTCCAACAGAAACCG+TGG 0.663969 1.2:-16667652 MS.gene83087:CDS
TGGATTTGTGGTGGTGACAG+AGG 0.664862 1.2:+16666465 None:intergenic
CGGCATCTGAAAGCAATTGG+GGG 0.713939 1.2:-16666786 MS.gene83087:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGTAACAACAAATTTTA+TGG + chr1.2:16666898-16666917 None:intergenic 15.0%
!!! TTGTAATTTTGAAACATTTA+AGG + chr1.2:16667305-16667324 None:intergenic 15.0%
!!! TTTTTTTTTTTACATCTTTG+TGG - chr1.2:16667493-16667512 MS.gene83087:CDS 15.0%
!! AACCATAACTAAAGATATAA+TGG - chr1.2:16666564-16666583 MS.gene83087:CDS 20.0%
!! AATCGAATTATTATCAGTAT+CGG + chr1.2:16666670-16666689 None:intergenic 20.0%
!! GTTGTTAATAATTGCTAAAA+TGG + chr1.2:16666861-16666880 None:intergenic 20.0%
!! TACCATTATATCTTTAGTTA+TGG + chr1.2:16666569-16666588 None:intergenic 20.0%
!!! ATATTCCATTAGAACATTTT+TGG - chr1.2:16666541-16666560 MS.gene83087:CDS 20.0%
!!! TTGTATTCTTATCATTTTAC+AGG - chr1.2:16667036-16667055 MS.gene83087:CDS 20.0%
! ATTAACAACAATAGCTAAAG+TGG - chr1.2:16666872-16666891 MS.gene83087:CDS 25.0%
! CAAAATTACAAAATCATACC+TGG - chr1.2:16667314-16667333 MS.gene83087:CDS 25.0%
! GACTGCAAAAATTTAAGTAA+AGG + chr1.2:16665708-16665727 None:intergenic 25.0%
! GATTGCATGTAATCATAATA+AGG + chr1.2:16665762-16665781 None:intergenic 25.0%
! TAATGCTTATTATCAGAAGA+TGG - chr1.2:16666397-16666416 MS.gene83087:intron 25.0%
! TTTCTTATTCTTAGTGAGTT+TGG - chr1.2:16667345-16667364 MS.gene83087:CDS 25.0%
!! CTTGATGTCAAATTATTTTC+TGG - chr1.2:16667122-16667141 MS.gene83087:CDS 25.0%
!!! TATTTTCTGGTTTAATGTAC+TGG - chr1.2:16667135-16667154 MS.gene83087:CDS 25.0%
ATACGTTAACATTCCTTACT+TGG + chr1.2:16666479-16666498 None:intergenic 30.0%
ATGAGATGAGAATTGAAAAG+GGG + chr1.2:16667196-16667215 None:intergenic 30.0%
CTAGTATATTAGGCAAATGA+GGG + chr1.2:16667168-16667187 None:intergenic 30.0%
GATGAGATGAGAATTGAAAA+GGG + chr1.2:16667197-16667216 None:intergenic 30.0%
GTCATTCTTCGATTTATAAC+AGG + chr1.2:16666957-16666976 None:intergenic 30.0%
TCTAGTATATTAGGCAAATG+AGG + chr1.2:16667169-16667188 None:intergenic 30.0%
TCTTCTTCACAATACTACAA+TGG - chr1.2:16667593-16667612 MS.gene83087:CDS 30.0%
TGATGAGATGAGAATTGAAA+AGG + chr1.2:16667198-16667217 None:intergenic 30.0%
TGGTTCCAAAAATGTTCTAA+TGG + chr1.2:16666549-16666568 None:intergenic 30.0%
! TCTTATCATTTTACAGGTCA+CGG - chr1.2:16667042-16667061 MS.gene83087:CDS 30.0%
! TGTCGAGTAAACATTCATTT+TGG - chr1.2:16667241-16667260 MS.gene83087:CDS 30.0%
AAAAACGGCACCAAGATAAA+CGG - chr1.2:16667530-16667549 MS.gene83087:CDS 35.0%
AATTACTTGGATTCCAGTCT+TGG + chr1.2:16665367-16665386 None:intergenic 35.0%
ACATTCCTTACTTGGATTTG+TGG + chr1.2:16666471-16666490 None:intergenic 35.0%
ACTAACGAAAGACACATTCA+AGG + chr1.2:16667372-16667391 None:intergenic 35.0%
AGAAGATGGATAAATCTCCT+GGG - chr1.2:16666411-16666430 MS.gene83087:intron 35.0%
ATACCTTCCTGGAAATATAC+AGG + chr1.2:16667070-16667089 None:intergenic 35.0%
ATCTAGAGGGATTACATCAT+TGG + chr1.2:16665784-16665803 None:intergenic 35.0%
CCTACAACAGTAATCTCATT+CGG - chr1.2:16666018-16666037 MS.gene83087:intron 35.0%
GAATTGATATCATACCTTCC+TGG + chr1.2:16667081-16667100 None:intergenic 35.0%
GGAATAGAGCATAATCTAGA+GGG + chr1.2:16665797-16665816 None:intergenic 35.0%
TACGTACTAACAGTGACTTT+AGG + chr1.2:16666077-16666096 None:intergenic 35.0%
TAGGAACAGAGACAATTACT+TGG + chr1.2:16665380-16665399 None:intergenic 35.0%
TAGTGCAAGAATCATATAGC+TGG + chr1.2:16667630-16667649 None:intergenic 35.0%
TATAACGAAGACTTGAGATC+AGG - chr1.2:16666110-16666129 MS.gene83087:intron 35.0%
TCTTCACAATACTACAATGG+TGG - chr1.2:16667596-16667615 MS.gene83087:CDS 35.0%
TGCTGATAGTAAGATGATAC+AGG - chr1.2:16666265-16666284 MS.gene83087:intron 35.0%
TTAAGTAAAGGTGACATGAC+CGG + chr1.2:16665696-16665715 None:intergenic 35.0%
TTTACTTGTGTAGTTGTGTG+AGG + chr1.2:16666614-16666633 None:intergenic 35.0%
! AGTATGATGGAAGTAGAAAG+TGG + chr1.2:16665627-16665646 None:intergenic 35.0%
! CTTAAATTTTTGCAGTCGAC+TGG - chr1.2:16665711-16665730 MS.gene83087:intron 35.0%
!! AAGCGTTTTTCAATCGAACT+TGG - chr1.2:16665667-16665686 MS.gene83087:intron 35.0%
!! ACAGTGACTTTAGGTTGTTT+AGG + chr1.2:16666068-16666087 None:intergenic 35.0%
!! AGCGTTTTTCAATCGAACTT+GGG - chr1.2:16665668-16665687 MS.gene83087:intron 35.0%
!! AGGGGCATTTCTAGTATATT+AGG + chr1.2:16667178-16667197 None:intergenic 35.0%
!! GGCATGTTTTGAACAATACT+GGG - chr1.2:16666039-16666058 MS.gene83087:intron 35.0%
AACAACGAGCTACTTGGAAT+CGG - chr1.2:16665399-16665418 MS.gene83087:CDS 40.0%
AACATTACTGCCATAGCTGT+CGG - chr1.2:16665486-16665505 MS.gene83087:intron 40.0%
ACATTATCCGGTTCAGAACA+CGG + chr1.2:16666353-16666372 None:intergenic 40.0%
AGAAAATGCCACATGACATC+TGG + chr1.2:16666772-16666791 None:intergenic 40.0%
ATTCCAAGTAGCTCGTTGTT+AGG + chr1.2:16665399-16665418 None:intergenic 40.0%
CAGAAGATGGATAAATCTCC+TGG - chr1.2:16666410-16666429 MS.gene83087:intron 40.0%
CCGAATGAGATTACTGTTGT+AGG + chr1.2:16666021-16666040 None:intergenic 40.0%
CGATTGAAAAACGCTTGAGA+AGG + chr1.2:16665663-16665682 None:intergenic 40.0%
CGGAATAGAGCATAATCTAG+AGG + chr1.2:16665798-16665817 None:intergenic 40.0%
CTATCGACAGCTTCCTTATT+TGG + chr1.2:16665831-16665850 None:intergenic 40.0%
GAATAAGAAAAGACACGTCC+AGG + chr1.2:16667335-16667354 None:intergenic 40.0%
GAGATTACTGTTGTAGGTGT+TGG + chr1.2:16666015-16666034 None:intergenic 40.0%
GATTGTTCTCCTTTGTTGCA+TGG - chr1.2:16666323-16666342 MS.gene83087:intron 40.0%
GCATGTGCAACTACATTATC+CGG + chr1.2:16666365-16666384 None:intergenic 40.0%
GTCAAGTGTAGGGTATAAAC+CGG + chr1.2:16666182-16666201 None:intergenic 40.0%
GTTCCTGTATATTTCCAGGA+AGG - chr1.2:16667064-16667083 MS.gene83087:CDS 40.0%
GTTTATACCCTACACTTGAC+CGG - chr1.2:16666182-16666201 MS.gene83087:intron 40.0%
TCTTAGCGACACAAAACGTT+TGG + chr1.2:16666241-16666260 None:intergenic 40.0%
TGAAAAACGCTTGAGAAGGT+GGG + chr1.2:16665659-16665678 None:intergenic 40.0%
TGGGAGTGATGTTAAGACTT+CGG + chr1.2:16665514-16665533 None:intergenic 40.0%
TTCCTTACTTGGATTTGTGG+TGG + chr1.2:16666468-16666487 None:intergenic 40.0%
TTGAAAAACGCTTGAGAAGG+TGG + chr1.2:16665660-16665679 None:intergenic 40.0%
TTTCAATCGAACTTGGGATC+CGG - chr1.2:16665674-16665693 MS.gene83087:intron 40.0%
! ATGGCAGTAATGTTGGTTGA+AGG + chr1.2:16665480-16665499 None:intergenic 40.0%
! TGCAAGAAGCATGGATTTGT+CGG + chr1.2:16665340-16665359 None:intergenic 40.0%
! TGGCAGTAATGTTGGTTGAA+GGG + chr1.2:16665479-16665498 None:intergenic 40.0%
!! AATCAGTGGAGTTGATAGCA+GGG + chr1.2:16667568-16667587 None:intergenic 40.0%
!! CGGCATGTTTTGAACAATAC+TGG - chr1.2:16666038-16666057 MS.gene83087:intron 40.0%
!! CTGACTCGGTGACTAAAATA+GGG + chr1.2:16665941-16665960 None:intergenic 40.0%
!! GATGTTTTGAGCCTTGAGAA+GGG + chr1.2:16665295-16665314 None:intergenic 40.0%
!! TTGTAGGTGTTGGCATTATC+AGG + chr1.2:16666005-16666024 None:intergenic 40.0%
ATCAGACACCAGATGTCATG+TGG - chr1.2:16666761-16666780 MS.gene83087:CDS 45.0%
ATTACGAGCAACCCAATTCG+CGG + chr1.2:16665442-16665461 None:intergenic 45.0%
CACCACCACAAATCCAAGTA+AGG - chr1.2:16666463-16666482 MS.gene83087:intron 45.0%
CACGGTTCCTGTATATTTCC+AGG - chr1.2:16667060-16667079 MS.gene83087:CDS 45.0%
CCTGGGAGTTGTGATTTCAA+AGG - chr1.2:16666428-16666447 MS.gene83087:intron 45.0%
CGTCAAAGAGTCTCACATGT+TGG + chr1.2:16665317-16665336 None:intergenic 45.0%
GACAGCTATGGCAGTAATGT+TGG + chr1.2:16665487-16665506 None:intergenic 45.0%
GATACAGGCAGCACTTGATT+GGG - chr1.2:16666280-16666299 MS.gene83087:intron 45.0%
GTTCCTAACAACGAGCTACT+TGG - chr1.2:16665393-16665412 MS.gene83087:CDS 45.0%
TACATCTTTGTGGTGAGCAG+TGG - chr1.2:16667503-16667522 MS.gene83087:CDS 45.0%
TCCGGCATCTGAAAGCAATT+GGG - chr1.2:16666133-16666152 MS.gene83087:intron 45.0%
TGAAGAAGAGCCTGAATCAG+TGG + chr1.2:16667582-16667601 None:intergenic 45.0%
TGATACAGGCAGCACTTGAT+TGG - chr1.2:16666279-16666298 MS.gene83087:intron 45.0%
TGCAAATACAGTACCAGCAC+CGG + chr1.2:16666204-16666223 None:intergenic 45.0%
TGGGAAAGAGTCGAGTATGA+TGG + chr1.2:16665640-16665659 None:intergenic 45.0%
! AGCTTCCTTATTTGGCGGTA+AGG + chr1.2:16665823-16665842 None:intergenic 45.0%
! GCTTCCTTATTTGGCGGTAA+GGG + chr1.2:16665822-16665841 None:intergenic 45.0%
! TCGACAGCTTCCTTATTTGG+CGG + chr1.2:16665828-16665847 None:intergenic 45.0%
! TTTTAGTCACCGAGTCAGGA+TGG - chr1.2:16665943-16665962 MS.gene83087:intron 45.0%
! TTTTTATGCGAACGGAGCAC+CGG - chr1.2:16666160-16666179 MS.gene83087:intron 45.0%
!! AAGTGCTGTGCCGTTTATCT+TGG + chr1.2:16667543-16667562 None:intergenic 45.0%
!! ATCAGTGGAGTTGATAGCAG+GGG + chr1.2:16667567-16667586 None:intergenic 45.0%
!! CCTGACTCGGTGACTAAAAT+AGG + chr1.2:16665942-16665961 None:intergenic 45.0%
!! CCTTTGAAATCACAACTCCC+AGG + chr1.2:16666431-16666450 None:intergenic 45.0%
!! GAATCAGTGGAGTTGATAGC+AGG + chr1.2:16667569-16667588 None:intergenic 45.0%
!! GCTATCAACTCCACTGATTC+AGG - chr1.2:16667569-16667588 MS.gene83087:CDS 45.0%
!! GGATGTTTTGAGCCTTGAGA+AGG + chr1.2:16665296-16665315 None:intergenic 45.0%
!!! CCTATTTTAGTCACCGAGTC+AGG - chr1.2:16665939-16665958 MS.gene83087:intron 45.0%
!!! TGGGGGCTTTTTTATGCGAA+CGG - chr1.2:16666152-16666171 MS.gene83087:intron 45.0%
!!! ATATATTTTCAATTAATTTA+TGG - chr1.2:16666835-16666854 MS.gene83087:CDS 5.0%
ACGAGAACAGGAGCTGCATT+TGG + chr1.2:16665534-16665553 None:intergenic 50.0%
ATCTTTGTGGTGAGCAGTGG+CGG - chr1.2:16667506-16667525 MS.gene83087:CDS 50.0%
CAATGCAACTGCCGCGAATT+GGG - chr1.2:16665428-16665447 MS.gene83087:intron 50.0%
CAGCACTTGATTGGGCTTGT+GGG - chr1.2:16666288-16666307 MS.gene83087:intron 50.0%
CCCCAATTGCTTTCAGATGC+CGG + chr1.2:16666137-16666156 None:intergenic 50.0%
CCGGCATCTGAAAGCAATTG+GGG - chr1.2:16666134-16666153 MS.gene83087:intron 50.0%
CGAAGACTTGAGATCAGGTC+CGG - chr1.2:16666115-16666134 MS.gene83087:intron 50.0%
CGAGAACAGGAGCTGCATTT+GGG + chr1.2:16665533-16665552 None:intergenic 50.0%
CGGCATCTGAAAGCAATTGG+GGG - chr1.2:16666135-16666154 MS.gene83087:intron 50.0%
CTTCTTGCACTTGCCAAGAC+TGG - chr1.2:16665351-16665370 MS.gene83087:CDS 50.0%
CTTGGCAAGTGCAAGAAGCA+TGG + chr1.2:16665349-16665368 None:intergenic 50.0%
GCATTATCAGGAGTTGCGTC+CGG + chr1.2:16665993-16666012 None:intergenic 50.0%
GGAGAACAATCCACCTTTCC+TGG + chr1.2:16666314-16666333 None:intergenic 50.0%
GTCCGGCATCTGAAAGCAAT+TGG - chr1.2:16666132-16666151 MS.gene83087:intron 50.0%
GTGAGCAGTGGCGGTAAAAA+CGG - chr1.2:16667515-16667534 MS.gene83087:CDS 50.0%
TATCCGGTTCAGAACACGGT+TGG + chr1.2:16666349-16666368 None:intergenic 50.0%
TGTAGCGCAGATACGAGAAC+AGG + chr1.2:16665546-16665565 None:intergenic 50.0%
! CCTTATTTGGCGGTAAGGGA+CGG + chr1.2:16665818-16665837 None:intergenic 50.0%
! TGGATTTGTGGTGGTGACAG+AGG + chr1.2:16666459-16666478 None:intergenic 50.0%
AGAAACCGTGGCCCTTCTCA+AGG - chr1.2:16665281-16665300 MS.gene83087:CDS 55.0%
AGAAGGGCCACGGTTTCTGT+TGG + chr1.2:16665279-16665298 None:intergenic 55.0%
CCAATGCAACTGCCGCGAAT+TGG - chr1.2:16665427-16665446 MS.gene83087:intron 55.0%
CCAATTCGCGGCAGTTGCAT+TGG + chr1.2:16665430-16665449 None:intergenic 55.0%
CCGTCCCTTACCGCCAAATA+AGG - chr1.2:16665815-16665834 MS.gene83087:intron 55.0%
GACTTCGGAACCGACAGCTA+TGG + chr1.2:16665499-16665518 None:intergenic 55.0%
GCAGCACTTGATTGGGCTTG+TGG - chr1.2:16666287-16666306 MS.gene83087:intron 55.0%
GCCAAGTCCAACAGAAACCG+TGG - chr1.2:16665269-16665288 MS.gene83087:CDS 55.0%
GCCACGGTTTCTGTTGGACT+TGG + chr1.2:16665273-16665292 None:intergenic 55.0%
TCGGACGAACCACCTTTGGA+GGG + chr1.2:16665969-16665988 None:intergenic 55.0%
TTGAGCCTTGAGAAGGGCCA+CGG + chr1.2:16665289-16665308 None:intergenic 55.0%
TTTGGAGGGCCATCCTGACT+CGG + chr1.2:16665955-16665974 None:intergenic 55.0%
! CACGGTTGGCCATGCAACAA+AGG + chr1.2:16666335-16666354 None:intergenic 55.0%
! TGGCCAACCGTGTTCTGAAC+CGG - chr1.2:16666343-16666362 MS.gene83087:intron 55.0%
!! ACCAGCACCGGTCAAGTGTA+GGG + chr1.2:16666192-16666211 None:intergenic 55.0%
!! TACCAGCACCGGTCAAGTGT+AGG + chr1.2:16666193-16666212 None:intergenic 55.0%
ACCCTACACTTGACCGGTGC+TGG - chr1.2:16666188-16666207 MS.gene83087:intron 60.0%
ATCAGGAGTTGCGTCCGGCT+CGG + chr1.2:16665988-16666007 None:intergenic 60.0%
CAAAGGTGGTTCGTCCGAGC+CGG - chr1.2:16665971-16665990 MS.gene83087:intron 60.0%
CTCGGACGAACCACCTTTGG+AGG + chr1.2:16665970-16665989 None:intergenic 60.0%
CTTGATTGGGCTTGTGGGCC+AGG - chr1.2:16666293-16666312 MS.gene83087:intron 60.0%
GAGTCAGGATGGCCCTCCAA+AGG - chr1.2:16665954-16665973 MS.gene83087:intron 60.0%
TCAGGATGGCCCTCCAAAGG+TGG - chr1.2:16665957-16665976 MS.gene83087:intron 60.0%
TTGGGCTTGTGGGCCAGGAA+AGG - chr1.2:16666298-16666317 MS.gene83087:intron 60.0%
GGCTTGTGGGCCAGGAAAGG+TGG - chr1.2:16666301-16666320 MS.gene83087:intron 65.0%
! CGGCTCGGACGAACCACCTT+TGG + chr1.2:16665973-16665992 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 16665267 16667676 16665267 ID=MS.gene83087
chr1.2 mRNA 16665267 16667676 16665267 ID=MS.gene83087.t1;Parent=MS.gene83087
chr1.2 exon 16666464 16667676 16666464 ID=MS.gene83087.t1.exon1;Parent=MS.gene83087.t1
chr1.2 CDS 16666464 16667676 16666464 ID=cds.MS.gene83087.t1;Parent=MS.gene83087.t1
chr1.2 exon 16665858 16665885 16665858 ID=MS.gene83087.t1.exon2;Parent=MS.gene83087.t1
chr1.2 CDS 16665858 16665885 16665858 ID=cds.MS.gene83087.t1;Parent=MS.gene83087.t1
chr1.2 exon 16665267 16665420 16665267 ID=MS.gene83087.t1.exon3;Parent=MS.gene83087.t1
chr1.2 CDS 16665267 16665420 16665267 ID=cds.MS.gene83087.t1;Parent=MS.gene83087.t1
Gene Sequence

>MS.gene83087

ATGCCAAGTCCAACAGAAACCGTGGCCCTTCTCAAGGCTCAAAACATCCAACATGTGAGACTCTTTGACGCCGACAAATCCATGCTTCTTGCACTTGCCAAGACTGGAATCCAAGTAATTGTCTCTGTTCCTAACAACGAGCTACTTGGAATCGGTCAATCCAATGCAACTGCCGCGAATTGGGTTGCTCGTAATGTCATAGCTCATGTCCCTTCAACCAACATTACTGCCATAGCTGTCGGTTCCGAAGTCTTAACATCACTCCCAAATGCAGCTCCTGTTCTCGTATCTGCGCTACAATTCATTCAGTCTGCACTTGTTGCAGCTAATCTTGATGATCAAATTAAAGTATCTACTCCACTTTCTACTTCCATCATACTCGACTCTTTCCCACCTTCTCAAGCGTTTTTCAATCGAACTTGGGATCCGGTCATGTCACCTTTACTTAAATTTTTGCAGTCGACTGGTTCTTATCTTATGCTCAATGTATATCCTTATTATGATTACATGCAATCCAATGATGTAATCCCTCTAGATTATGCTCTATTCCGTCCCTTACCGCCAAATAAGGAAGCTGTCGATAGTAACACTCTCTTTCATTATACTAATGTTTTTGATGCAGTTATTGATGCTGCTTATTTCGCAATGTCGTATTTGAAGTTTACTAATATCCCTATTTTAGTCACCGAGTCAGGATGGCCCTCCAAAGGTGGTTCGTCCGAGCCGGACGCAACTCCTGATAATGCCAACACCTACAACAGTAATCTCATTCGGCATGTTTTGAACAATACTGGGACTCCTAAACAACCTAAAGTCACTGTTAGTACGTATATTTACGAGCTTTATAACGAAGACTTGAGATCAGGTCCGGCATCTGAAAGCAATTGGGGGCTTTTTTATGCGAACGGAGCACCGGTTTATACCCTACACTTGACCGGTGCTGGTACTGTATTTGCAAACGATACAACGAACCAAACGTTTTGTGTCGCTAAGAGTAATGCTGATAGTAAGATGATACAGGCAGCACTTGATTGGGCTTGTGGGCCAGGAAAGGTGGATTGTTCTCCTTTGTTGCATGGCCAACCGTGTTCTGAACCGGATAATGTAGTTGCACATGCTACATATGCTTTTAATGCTTATTATCAGAAGATGGATAAATCTCCTGGGAGTTGTGATTTCAAAGGAGTTGCCTCTGTCACCACCACAAATCCAAGTAAGGAATGTTAACGTATTTGTTAGCATCTACATGTGAAGTTCACTACAAAAGTATGAATATATTCCATTAGAACATTTTTGGAACCATAACTAAAGATATAATGGTAAATACATATTTGCACTTTGAATCCTCACACAACTACACAAGTAAACACAATCTATGAAGCTCTGACACAGACACAACACCGATACTGATAATAATTCGATTTTTTTTAAAACTTGAACGTAGCTACATGTGTTAGTGTCGCGTCAGTGACTCAGTGTTCGACTCTAATGCATATCAGACACCAGATGTCATGTGGCATTTTCTGTTTCTGTTTTATATATATATATATATATATATATATATATATATATATTTTCAATTAATTTATGGCCATTTTAGCAATTATTAACAACAATAGCTAAAGTGGCCATAAAATTTGTTGTTACTTTTGCAGCTTTTCTCTGTATTAGCTATTTTCTGTCAACTCCTGTTATAAATCGAAGAATGACTTGCATTCACAAATCTCAATTTCAAGTACATTAGCATTTTGATACAACTGATATATTTATTGTATTCTTATCATTTTACAGGTCACGGTTCCTGTATATTTCCAGGAAGGTATGATATCAATTCTCAAGCTTATGCTGACATGTGCTTGATGTCAAATTATTTTCTGGTTTAATGTACTGGATTCTTGCCCTCATTTGCCTAATATACTAGAAATGCCCCTTTTCAATTCTCATCTCATCATCACTACAACTTGTCACATGTTTTGTCGAGTAAACATTCATTTTGGTCACTGAATATGTCAAGCTGTTGTTAACTTATTATAGTCCTTAAATGTTTCAAAATTACAAAATCATACCTGGACGTGTCTTTTCTTATTCTTAGTGAGTTTGGTCCTTGAATGTGTCTTTCGTTAGTTAGTTTAGTTCTTAAATGTGTCATATGTTAGTTTGTTTGCAATTTCAATACATTCATGACAATTCACTCTTGTTTTGTTCTTTCTAATATGTATATATGTTTTTTTTTTTTTACATCTTTGTGGTGAGCAGTGGCGGTAAAAACGGCACCAAGATAAACGGCACAGCACTTGCCCCTGCTATCAACTCCACTGATTCAGGCTCTTCTTCACAATACTACAATGGTGGATCTTTCACCAGCTATATGATTCTTGCACTACTTTTAAGTGCATTTGTTGTCTTGTAA
Protein sequence

>MS.gene83087.t1

MPSPTETVALLKAQNIQHVRLFDADKSMLLALAKTGIQVIVSVPNNELLGIGQSNATAANWVARNVIAHVPSTNITAIAVGSEVLTSLPNAAPVLVSALQFIQSALVAANLDDQIKVSTPLSTSIILDSFPPSQAFFNRTWDPVMSPLLKFLQSTGSYLMLNVYPYYDYMQSNDVIPLDYALFRPLPPNKEAVDSNTLFHYTNVFDAVIDAAYFAMSYLKFTNIPILVTESGWPSKGGSSEPDATPDNANTYNSNLIRHVLNNTGTPKQPKVTVSTYIYELYNEDLRSGPASESNWGLFYANGAPVYTLHLTGAGTVFANDTTNQTFCVAKSNADSKMIQAALDWACGPGKVDCSPLLHGQPCSEPDNVVAHATYAFNAYYQKMDKSPGSCDFKGVASVTTTNPSHGSCIFPGSGGKNGTKINGTALAPAINSTDSGSSSQYYNGGSFTSYMILALLLSAFVVL