Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83432.t1 | XP_003612502.1 | 95.1 | 267 | 13 | 0 | 1 | 267 | 1 | 267 | 4.40E-132 | 480.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83432.t1 | G7K428 | 95.1 | 267 | 13 | 0 | 1 | 267 | 1 | 267 | 3.1e-132 | 480.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050508 | MS.gene83432 | 0.822075 | 2.88E-53 | -1.69E-46 |
| MS.gene050936 | MS.gene83432 | 0.809048 | 2.29E-50 | -1.69E-46 |
| MS.gene052590 | MS.gene83432 | 0.819276 | 1.26E-52 | -1.69E-46 |
| MS.gene053330 | MS.gene83432 | 0.805634 | 1.21E-49 | -1.69E-46 |
| MS.gene056305 | MS.gene83432 | 0.802857 | 4.60E-49 | -1.69E-46 |
| MS.gene059710 | MS.gene83432 | 0.834938 | 2.24E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83432.t1 | MTR_5g025750 | 95.131 | 267 | 13 | 0 | 1 | 267 | 1 | 267 | 1.00e-163 | 454 |
| MS.gene83432.t1 | MTR_4g068770 | 44.762 | 210 | 107 | 3 | 64 | 267 | 56 | 262 | 1.49e-55 | 179 |
| MS.gene83432.t1 | MTR_4g082590 | 38.983 | 177 | 94 | 3 | 95 | 265 | 123 | 291 | 1.06e-39 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83432.t1 | AT4G19390 | 65.746 | 181 | 62 | 0 | 87 | 267 | 93 | 273 | 1.77e-83 | 251 |
| MS.gene83432.t1 | AT4G19390 | 65.698 | 172 | 59 | 0 | 96 | 267 | 14 | 185 | 1.96e-79 | 238 |
| MS.gene83432.t1 | AT5G13720 | 49.198 | 187 | 79 | 4 | 92 | 267 | 80 | 261 | 2.26e-53 | 174 |
Find 46 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGATGGTGTTATCGTAAA+TGG | 0.175867 | 5.4:+16869761 | None:intergenic |
| TGTTGGGATATAAGAGTTTC+AGG | 0.199603 | 5.4:-16869685 | MS.gene83432:CDS |
| TCTGATAGATCAAATCTATT+TGG | 0.202531 | 5.4:-16867925 | MS.gene83432:CDS |
| CCGCTTGTTGCTTCCAATTC+GGG | 0.241751 | 5.4:-16869593 | MS.gene83432:CDS |
| TGTCGGTTTCTTGCTATTCT+TGG | 0.241873 | 5.4:-16869041 | MS.gene83432:CDS |
| GCCGCTTGTTGCTTCCAATT+CGG | 0.314099 | 5.4:-16869594 | MS.gene83432:CDS |
| GGAACGGTGATGCTAGTCTT+TGG | 0.339539 | 5.4:-16868015 | MS.gene83432:CDS |
| AACAGAATCAAAACCCGAAT+TGG | 0.359828 | 5.4:+16869580 | None:intergenic |
| CTTCTCAGGAACGACCAAAA+TGG | 0.370797 | 5.4:-16867776 | MS.gene83432:intron |
| TGATTCTGTTGTATCTCATC+AGG | 0.392515 | 5.4:-16869567 | MS.gene83432:CDS |
| AATTCTATATTCAGCTCATA+TGG | 0.410293 | 5.4:-16869722 | MS.gene83432:CDS |
| ATTTGGCTTATTCACTTTGA+AGG | 0.417143 | 5.4:-16867908 | MS.gene83432:intron |
| TATTCAGCTCATATGGCAAA+AGG | 0.425103 | 5.4:-16869715 | MS.gene83432:CDS |
| ATAGTGATGCTGCTTCTGAT+TGG | 0.427966 | 5.4:-16867705 | MS.gene83432:CDS |
| CAATGCCTGAGAAAGTTTCA+TGG | 0.433779 | 5.4:+16869793 | None:intergenic |
| GGCAAAAGGGTCTCTGTGTT+GGG | 0.437813 | 5.4:-16869701 | MS.gene83432:CDS |
| TCTATGCCTTCTAACTTCCC+TGG | 0.450735 | 5.4:+16869539 | None:intergenic |
| GAGATGCCAGGGAAGTTAGA+AGG | 0.458831 | 5.4:-16869545 | MS.gene83432:CDS |
| CATGAAACTTTCTCAGGCAT+TGG | 0.473115 | 5.4:-16869792 | MS.gene83432:CDS |
| TTTGTTTGACAGAAGTAAGA+AGG | 0.477435 | 5.4:-16867682 | MS.gene83432:CDS |
| TGGCAAAAGGGTCTCTGTGT+TGG | 0.477475 | 5.4:-16869702 | MS.gene83432:CDS |
| TGTAGGTGATTTATAGATGT+CGG | 0.486045 | 5.4:-16869058 | MS.gene83432:intron |
| TGACAGTGAATTAAAGATGA+TGG | 0.495193 | 5.4:+16869746 | None:intergenic |
| CACTATCACATGACCAACCT+TGG | 0.497716 | 5.4:+16867722 | None:intergenic |
| CCCAACCATGAAACTTTCTC+AGG | 0.502486 | 5.4:-16869798 | None:intergenic |
| TTTGCTGTCCAAGCTGAATG+AGG | 0.509196 | 5.4:-16867589 | MS.gene83432:CDS |
| TTAATTAGCCTCATTCAGCT+TGG | 0.510184 | 5.4:+16867581 | None:intergenic |
| CAAATCCACAGGAGTTTGAA+TGG | 0.513144 | 5.4:+16867656 | None:intergenic |
| ATCAATTCTATGCTTCATCA+AGG | 0.516481 | 5.4:-16868997 | MS.gene83432:intron |
| GTATCTCATCAGGAGATGCC+AGG | 0.523169 | 5.4:-16869557 | MS.gene83432:CDS |
| GCAATTGAATTACTTTACTA+CGG | 0.524763 | 5.4:+16868362 | None:intergenic |
| AATAGATTTGATCTATCAGA+AGG | 0.529196 | 5.4:+16867928 | None:intergenic |
| ATTCAGCTCATATGGCAAAA+GGG | 0.535020 | 5.4:-16869714 | MS.gene83432:CDS |
| GTGATGCTAGTCTTTGGAAT+GGG | 0.541127 | 5.4:-16868009 | MS.gene83432:CDS |
| GAAGCAACAAGCGGCGATGA+CGG | 0.551159 | 5.4:+16869602 | None:intergenic |
| AAGTTAGAAGGCATAGAAGA+AGG | 0.553417 | 5.4:-16869533 | MS.gene83432:CDS |
| CAGAAGCATAGCAAATCCAC+AGG | 0.569222 | 5.4:+16867645 | None:intergenic |
| GGTGATGCTAGTCTTTGGAA+TGG | 0.578084 | 5.4:-16868010 | MS.gene83432:CDS |
| AAAAGACTCTGCAACAAATG+TGG | 0.581983 | 5.4:+16868402 | None:intergenic |
| CAATTGCTGATAGAAGCTCT+TGG | 0.584191 | 5.4:-16868346 | MS.gene83432:intron |
| CATAGAAGAAGGCATTGAGA+AGG | 0.605938 | 5.4:-16869522 | MS.gene83432:intron |
| AATGAACTGAAAACCAAGGT+TGG | 0.611400 | 5.4:-16867735 | MS.gene83432:CDS |
| GGCTACCATTCAAACTCCTG+TGG | 0.627628 | 5.4:-16867661 | MS.gene83432:CDS |
| TATCTCATCAGGAGATGCCA+GGG | 0.638918 | 5.4:-16869556 | MS.gene83432:CDS |
| CCCGAATTGGAAGCAACAAG+CGG | 0.640431 | 5.4:+16869593 | None:intergenic |
| AGTGAATGAACTGAAAACCA+AGG | 0.699304 | 5.4:-16867739 | MS.gene83432:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTGTTTTTTTTTTTTTTT+TGG | + | chr5.4:16868446-16868465 | None:intergenic | 10.0% |
| !! | AGATAATAACAAACAATTAA+AGG | + | chr5.4:16868241-16868260 | None:intergenic | 15.0% |
| !!! | AACAAATTATACAAACTTTT+AGG | + | chr5.4:16869074-16869093 | None:intergenic | 15.0% |
| !! | AATTCTTCATATAATCAACT+TGG | - | chr5.4:16869125-16869144 | MS.gene83432:intron | 20.0% |
| !! | TTATGAAAATAAGCTGAAAA+CGG | - | chr5.4:16868009-16868028 | MS.gene83432:CDS | 20.0% |
| !!! | AGATTTGCTTAACTAAATTT+GGG | + | chr5.4:16868723-16868742 | None:intergenic | 20.0% |
| !!! | GTTTTTATATTCAACCATTT+TGG | + | chr5.4:16869613-16869632 | None:intergenic | 20.0% |
| !!! | TCTATGAATAGTTTTGAATT+TGG | - | chr5.4:16868258-16868277 | MS.gene83432:intron | 20.0% |
| ! | AATAGATTTGATCTATCAGA+AGG | + | chr5.4:16869447-16869466 | None:intergenic | 25.0% |
| ! | AATTCTATATTCAGCTCATA+TGG | - | chr5.4:16867650-16867669 | MS.gene83432:CDS | 25.0% |
| ! | ATTATTCAATTTGACATGCA+GGG | - | chr5.4:16868945-16868964 | MS.gene83432:intron | 25.0% |
| ! | ATTATTCACTTTCTCAAACT+GGG | - | chr5.4:16868844-16868863 | MS.gene83432:intron | 25.0% |
| ! | GCAATTGAATTACTTTACTA+CGG | + | chr5.4:16869013-16869032 | None:intergenic | 25.0% |
| ! | TATGATAGCATATTAGAATC+TGG | + | chr5.4:16868585-16868604 | None:intergenic | 25.0% |
| ! | TCTGATAGATCAAATCTATT+TGG | - | chr5.4:16869447-16869466 | MS.gene83432:intron | 25.0% |
| ! | TTGAGAAAGTGAATAATCTT+CGG | + | chr5.4:16868841-16868860 | None:intergenic | 25.0% |
| !! | AATAGTATGCTTTTGTGATT+TGG | - | chr5.4:16868494-16868513 | MS.gene83432:intron | 25.0% |
| !! | GAGATTTGCTTAACTAAATT+TGG | + | chr5.4:16868724-16868743 | None:intergenic | 25.0% |
| !! | TCACAAAAGCATACTATTAA+AGG | + | chr5.4:16868492-16868511 | None:intergenic | 25.0% |
| !!! | GCTGTTTTAAGTAGTTAATT+AGG | - | chr5.4:16867981-16868000 | MS.gene83432:CDS | 25.0% |
| !!! | GTTAGACCTAAATTTTAACA+CGG | + | chr5.4:16869177-16869196 | None:intergenic | 25.0% |
| !!! | TTGTAATCATTGGTTTGATT+TGG | - | chr5.4:16868169-16868188 | MS.gene83432:intron | 25.0% |
| ACTGAATAGTAACTACAAGT+GGG | - | chr5.4:16868517-16868536 | MS.gene83432:intron | 30.0% | |
| ATCAATTCTATGCTTCATCA+AGG | - | chr5.4:16868375-16868394 | MS.gene83432:CDS | 30.0% | |
| CATTATTCAATTTGACATGC+AGG | - | chr5.4:16868944-16868963 | MS.gene83432:intron | 30.0% | |
| CTGATACCGTGTTAAAATTT+AGG | - | chr5.4:16869168-16869187 | MS.gene83432:intron | 30.0% | |
| GATTATTCACTTTCTCAAAC+TGG | - | chr5.4:16868843-16868862 | MS.gene83432:intron | 30.0% | |
| GTTAGGCTTAAATTTGAAGA+TGG | - | chr5.4:16869229-16869248 | MS.gene83432:intron | 30.0% | |
| TGACAGTGAATTAAAGATGA+TGG | + | chr5.4:16867629-16867648 | None:intergenic | 30.0% | |
| TGTAGGTGATTTATAGATGT+CGG | - | chr5.4:16868314-16868333 | MS.gene83432:intron | 30.0% | |
| TGTGATTCTCTTCTTTCTAA+CGG | - | chr5.4:16869300-16869319 | MS.gene83432:intron | 30.0% | |
| TTCTTCTTCGTTGTAATCAT+TGG | - | chr5.4:16868159-16868178 | MS.gene83432:intron | 30.0% | |
| TTTGTTTGACAGAAGTAAGA+AGG | - | chr5.4:16869690-16869709 | MS.gene83432:CDS | 30.0% | |
| ! | ACTCTAAAAGCTATCTCATA+TGG | + | chr5.4:16868685-16868704 | None:intergenic | 30.0% |
| ! | ATTTGGCTTATTCACTTTGA+AGG | - | chr5.4:16869464-16869483 | MS.gene83432:intron | 30.0% |
| ! | CATGTAGATCTCTATCTTTT+AGG | - | chr5.4:16869336-16869355 | MS.gene83432:intron | 30.0% |
| ! | GTTTTTCTGATGTATTGTGT+AGG | - | chr5.4:16868297-16868316 | MS.gene83432:intron | 30.0% |
| !! | AAATCCTACTGACTTTGATA+AGG | + | chr5.4:16869521-16869540 | None:intergenic | 30.0% |
| !! | AGATCTCTATCTTTTAGGAA+CGG | - | chr5.4:16869341-16869360 | MS.gene83432:intron | 30.0% |
| !! | TTGCTATTCTTGGAGTTTTT+GGG | - | chr5.4:16868341-16868360 | MS.gene83432:intron | 30.0% |
| !!! | ATTTGTTGCAGAGTCTTTTT+TGG | - | chr5.4:16868974-16868993 | MS.gene83432:intron | 30.0% |
| !!! | TTTGTTGCAGAGTCTTTTTT+GGG | - | chr5.4:16868975-16868994 | MS.gene83432:intron | 30.0% |
| AAAAGACTCTGCAACAAATG+TGG | + | chr5.4:16868973-16868992 | None:intergenic | 35.0% | |
| AAAAGCTATCTCATATGGTG+AGG | + | chr5.4:16868680-16868699 | None:intergenic | 35.0% | |
| AACAGAATCAAAACCCGAAT+TGG | + | chr5.4:16867795-16867814 | None:intergenic | 35.0% | |
| AATGAACTGAAAACCAAGGT+TGG | - | chr5.4:16869637-16869656 | MS.gene83432:CDS | 35.0% | |
| ACTTTCCTTAATTCGTACCA+AGG | + | chr5.4:16868778-16868797 | None:intergenic | 35.0% | |
| AGTGAATGAACTGAAAACCA+AGG | - | chr5.4:16869633-16869652 | MS.gene83432:CDS | 35.0% | |
| ATTCAGCTCATATGGCAAAA+GGG | - | chr5.4:16867658-16867677 | MS.gene83432:CDS | 35.0% | |
| CTAACTCATCGTTACAAAAC+TGG | + | chr5.4:16869214-16869233 | None:intergenic | 35.0% | |
| CTTTCCTTAATTCGTACCAA+GGG | + | chr5.4:16868777-16868796 | None:intergenic | 35.0% | |
| GACAACACTAACACAAAAGT+AGG | + | chr5.4:16869259-16869278 | None:intergenic | 35.0% | |
| GACTGAATAGTAACTACAAG+TGG | - | chr5.4:16868516-16868535 | MS.gene83432:intron | 35.0% | |
| TAAAAGCTAGCTCATCATTG+AGG | + | chr5.4:16868548-16868567 | None:intergenic | 35.0% | |
| TATTCAGCTCATATGGCAAA+AGG | - | chr5.4:16867657-16867676 | MS.gene83432:CDS | 35.0% | |
| TCAAAGTCAGTAGGATTTAG+TGG | - | chr5.4:16869523-16869542 | MS.gene83432:CDS | 35.0% | |
| TCAACCTTATCAAAGTCAGT+AGG | - | chr5.4:16869514-16869533 | MS.gene83432:intron | 35.0% | |
| TGACTTTGATAAGGTTGACT+AGG | + | chr5.4:16869512-16869531 | None:intergenic | 35.0% | |
| TGATTCTGTTGTATCTCATC+AGG | - | chr5.4:16867805-16867824 | MS.gene83432:intron | 35.0% | |
| TGTTGGGATATAAGAGTTTC+AGG | - | chr5.4:16867687-16867706 | MS.gene83432:CDS | 35.0% | |
| TTAACCCTTGGTACGAATTA+AGG | - | chr5.4:16868770-16868789 | MS.gene83432:intron | 35.0% | |
| ! | AAGTTAGAAGGCATAGAAGA+AGG | - | chr5.4:16867839-16867858 | MS.gene83432:intron | 35.0% |
| ! | AGTGTTGTCATTGTTCTAAG+AGG | - | chr5.4:16869270-16869289 | MS.gene83432:intron | 35.0% |
| ! | TTAATTAGCCTCATTCAGCT+TGG | + | chr5.4:16869794-16869813 | None:intergenic | 35.0% |
| !! | CAGTTTTGTAACGATGAGTT+AGG | - | chr5.4:16869212-16869231 | MS.gene83432:intron | 35.0% |
| !! | GATGATGGTGTTATCGTAAA+TGG | + | chr5.4:16867614-16867633 | None:intergenic | 35.0% |
| !!! | AGAGTCTTTTTTGGGATACT+TGG | - | chr5.4:16868983-16869002 | MS.gene83432:intron | 35.0% |
| !!! | CTTGCTATTCTTGGAGTTTT+TGG | - | chr5.4:16868340-16868359 | MS.gene83432:intron | 35.0% |
| !!! | CTTTTAGAGTTGAGTTAAGC+TGG | - | chr5.4:16868695-16868714 | MS.gene83432:intron | 35.0% |
| AGACATGTGTTGAGAGTTTG+TGG | - | chr5.4:16868135-16868154 | MS.gene83432:intron | 40.0% | |
| CAAATCCACAGGAGTTTGAA+TGG | + | chr5.4:16869719-16869738 | None:intergenic | 40.0% | |
| CAATTGCTGATAGAAGCTCT+TGG | - | chr5.4:16869026-16869045 | MS.gene83432:CDS | 40.0% | |
| CACATGTCTTACAACCAGTT+TGG | + | chr5.4:16868124-16868143 | None:intergenic | 40.0% | |
| CCAATTCGTAAGTACATGTC+AGG | - | chr5.4:16868746-16868765 | MS.gene83432:intron | 40.0% | |
| CCTGACATGTACTTACGAAT+TGG | + | chr5.4:16868749-16868768 | None:intergenic | 40.0% | |
| GTCTTACAACCAGTTTGGAT+CGG | + | chr5.4:16868119-16868138 | None:intergenic | 40.0% | |
| TCAAATAAGCCGATCCAAAC+TGG | - | chr5.4:16868107-16868126 | MS.gene83432:intron | 40.0% | |
| TCTCATATGGTGAGGTTTGT+AGG | + | chr5.4:16868672-16868691 | None:intergenic | 40.0% | |
| TTCCAATGTTTCTCCTTCTC+AGG | - | chr5.4:16869582-16869601 | MS.gene83432:CDS | 40.0% | |
| TTCCTGAGAAGGAGAAACAT+TGG | + | chr5.4:16869587-16869606 | None:intergenic | 40.0% | |
| ! | ATAGTGATGCTGCTTCTGAT+TGG | - | chr5.4:16869667-16869686 | MS.gene83432:CDS | 40.0% |
| !! | CATAGAAGAAGGCATTGAGA+AGG | - | chr5.4:16867850-16867869 | MS.gene83432:intron | 40.0% |
| !! | GTGATGCTAGTCTTTGGAAT+GGG | - | chr5.4:16869363-16869382 | MS.gene83432:intron | 40.0% |
| !! | TGTCGGTTTCTTGCTATTCT+TGG | - | chr5.4:16868331-16868350 | MS.gene83432:intron | 40.0% |
| !!! | GGAGTTTTTGGGTCTTTGAT+TGG | - | chr5.4:16868352-16868371 | MS.gene83432:CDS | 40.0% |
| AGCATCAAAATGCAGCAGAG+AGG | + | chr5.4:16869560-16869579 | None:intergenic | 45.0% | |
| CACAGGACTGCACATTTACA+GGG | + | chr5.4:16868625-16868644 | None:intergenic | 45.0% | |
| CACTATCACATGACCAACCT+TGG | + | chr5.4:16869653-16869672 | None:intergenic | 45.0% | |
| CTGCACATTTACAGGGATCT+AGG | + | chr5.4:16868618-16868637 | None:intergenic | 45.0% | |
| CTTCTCAGGAACGACCAAAA+TGG | - | chr5.4:16869596-16869615 | MS.gene83432:CDS | 45.0% | |
| GGTTTGTAGGACTAGACATC+CGG | + | chr5.4:16868659-16868678 | None:intergenic | 45.0% | |
| TACATGTCAGGCTTAACCCT+TGG | - | chr5.4:16868758-16868777 | MS.gene83432:intron | 45.0% | |
| TATCTCATCAGGAGATGCCA+GGG | - | chr5.4:16867816-16867835 | MS.gene83432:intron | 45.0% | |
| TCACAGGACTGCACATTTAC+AGG | + | chr5.4:16868626-16868645 | None:intergenic | 45.0% | |
| TCTATGCCTTCTAACTTCCC+TGG | + | chr5.4:16867836-16867855 | None:intergenic | 45.0% | |
| ! | CAGAAGCATAGCAAATCCAC+AGG | + | chr5.4:16869730-16869749 | None:intergenic | 45.0% |
| ! | GGTATCAGAGCCTATCGATT+CGG | + | chr5.4:16869156-16869175 | None:intergenic | 45.0% |
| ! | TTTGCTGTCCAAGCTGAATG+AGG | - | chr5.4:16869783-16869802 | MS.gene83432:CDS | 45.0% |
| !! | CATTTTGGTCGTTCCTGAGA+AGG | + | chr5.4:16869598-16869617 | None:intergenic | 45.0% |
| !! | GGTGATGCTAGTCTTTGGAA+TGG | - | chr5.4:16869362-16869381 | MS.gene83432:intron | 45.0% |
| !! | GTATCAGAGCCTATCGATTC+GGG | + | chr5.4:16869155-16869174 | None:intergenic | 45.0% |
| ATCCGGAGCGTGAAATTCAC+AGG | + | chr5.4:16868642-16868661 | None:intergenic | 50.0% | |
| CCCGAATTGGAAGCAACAAG+CGG | + | chr5.4:16867782-16867801 | None:intergenic | 50.0% | |
| CTTGGATAGCCCGAATCGAT+AGG | - | chr5.4:16869143-16869162 | MS.gene83432:intron | 50.0% | |
| GAGATGCCAGGGAAGTTAGA+AGG | - | chr5.4:16867827-16867846 | MS.gene83432:intron | 50.0% | |
| GGCAAAAGGGTCTCTGTGTT+GGG | - | chr5.4:16867671-16867690 | MS.gene83432:CDS | 50.0% | |
| GGCTACCATTCAAACTCCTG+TGG | - | chr5.4:16869711-16869730 | MS.gene83432:CDS | 50.0% | |
| GTATCTCATCAGGAGATGCC+AGG | - | chr5.4:16867815-16867834 | MS.gene83432:intron | 50.0% | |
| GTCCTGTGAATTTCACGCTC+CGG | - | chr5.4:16868637-16868656 | MS.gene83432:intron | 50.0% | |
| TGGCAAAAGGGTCTCTGTGT+TGG | - | chr5.4:16867670-16867689 | MS.gene83432:CDS | 50.0% | |
| ! | CCGCTTGTTGCTTCCAATTC+GGG | - | chr5.4:16867779-16867798 | MS.gene83432:intron | 50.0% |
| ! | GCCGCTTGTTGCTTCCAATT+CGG | - | chr5.4:16867778-16867797 | MS.gene83432:intron | 50.0% |
| !! | GGAACGGTGATGCTAGTCTT+TGG | - | chr5.4:16869357-16869376 | MS.gene83432:intron | 50.0% |
| GAAGCAACAAGCGGCGATGA+CGG | + | chr5.4:16867773-16867792 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 16867581 | 16869813 | 16867581 | ID=MS.gene83432 |
| chr5.4 | mRNA | 16867581 | 16869813 | 16867581 | ID=MS.gene83432.t1;Parent=MS.gene83432 |
| chr5.4 | exon | 16869523 | 16869813 | 16869523 | ID=MS.gene83432.t1.exon1;Parent=MS.gene83432.t1 |
| chr5.4 | CDS | 16869523 | 16869813 | 16869523 | ID=cds.MS.gene83432.t1;Parent=MS.gene83432.t1 |
| chr5.4 | exon | 16868998 | 16869075 | 16868998 | ID=MS.gene83432.t1.exon2;Parent=MS.gene83432.t1 |
| chr5.4 | CDS | 16868998 | 16869075 | 16868998 | ID=cds.MS.gene83432.t1;Parent=MS.gene83432.t1 |
| chr5.4 | exon | 16868347 | 16868428 | 16868347 | ID=MS.gene83432.t1.exon3;Parent=MS.gene83432.t1 |
| chr5.4 | CDS | 16868347 | 16868428 | 16868347 | ID=cds.MS.gene83432.t1;Parent=MS.gene83432.t1 |
| chr5.4 | exon | 16867909 | 16868051 | 16867909 | ID=MS.gene83432.t1.exon4;Parent=MS.gene83432.t1 |
| chr5.4 | CDS | 16867909 | 16868051 | 16867909 | ID=cds.MS.gene83432.t1;Parent=MS.gene83432.t1 |
| chr5.4 | exon | 16867581 | 16867790 | 16867581 | ID=MS.gene83432.t1.exon5;Parent=MS.gene83432.t1 |
| chr5.4 | CDS | 16867581 | 16867790 | 16867581 | ID=cds.MS.gene83432.t1;Parent=MS.gene83432.t1 |
| Gene Sequence |
| Protein sequence |
