Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84431.t1 | XP_024627233.1 | 85.2 | 528 | 51 | 3 | 1 | 515 | 1 | 514 | 9.80E-197 | 696.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84431.t1 | Q9FME2 | 38.6 | 394 | 195 | 7 | 1 | 383 | 1 | 358 | 3.8e-56 | 220.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84431.t1 | A0A396H244 | 85.2 | 528 | 51 | 3 | 1 | 515 | 1 | 514 | 7.0e-197 | 696.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene063501 | MS.gene84431 | PPI |
MS.gene044456 | MS.gene84431 | PPI |
MS.gene84431 | MS.gene044455 | PPI |
MS.gene033053 | MS.gene84431 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84431.t1 | MTR_7g055610 | 89.734 | 526 | 29 | 3 | 1 | 515 | 8 | 519 | 0.0 | 912 |
MS.gene84431.t1 | MTR_7g057520 | 89.734 | 526 | 29 | 3 | 1 | 515 | 1 | 512 | 0.0 | 912 |
MS.gene84431.t1 | MTR_4g109640 | 41.000 | 400 | 171 | 11 | 10 | 385 | 12 | 370 | 1.35e-75 | 243 |
MS.gene84431.t1 | MTR_4g109640 | 40.769 | 390 | 182 | 10 | 10 | 383 | 12 | 368 | 1.06e-74 | 243 |
MS.gene84431.t1 | MTR_7g013840 | 40.000 | 400 | 178 | 9 | 10 | 383 | 12 | 375 | 4.16e-74 | 242 |
MS.gene84431.t1 | MTR_4g109640 | 41.146 | 384 | 177 | 10 | 10 | 377 | 12 | 362 | 5.68e-74 | 239 |
MS.gene84431.t1 | MTR_7g013840 | 39.900 | 401 | 178 | 9 | 10 | 383 | 12 | 376 | 6.18e-74 | 242 |
MS.gene84431.t1 | MTR_4g083150 | 35.842 | 505 | 233 | 16 | 1 | 460 | 1 | 459 | 2.20e-72 | 238 |
MS.gene84431.t1 | MTR_7g098440 | 31.522 | 460 | 258 | 17 | 15 | 439 | 13 | 450 | 8.20e-40 | 150 |
MS.gene84431.t1 | MTR_1g045800 | 28.495 | 372 | 219 | 10 | 8 | 358 | 7 | 352 | 1.68e-32 | 129 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84431.t1 | AT3G25150 | 42.490 | 506 | 247 | 10 | 7 | 505 | 8 | 476 | 3.72e-103 | 318 |
MS.gene84431.t1 | AT3G25150 | 42.490 | 506 | 247 | 10 | 7 | 505 | 107 | 575 | 4.51e-102 | 318 |
MS.gene84431.t1 | AT5G48650 | 37.004 | 454 | 220 | 15 | 12 | 435 | 13 | 430 | 2.39e-63 | 214 |
MS.gene84431.t1 | AT5G60980 | 34.190 | 506 | 235 | 12 | 1 | 481 | 1 | 433 | 1.79e-60 | 206 |
MS.gene84431.t1 | AT5G60980 | 34.190 | 506 | 235 | 12 | 1 | 481 | 1 | 433 | 1.79e-60 | 206 |
MS.gene84431.t1 | AT5G60980 | 34.122 | 507 | 235 | 12 | 1 | 481 | 1 | 434 | 2.38e-60 | 206 |
MS.gene84431.t1 | AT5G60980 | 34.122 | 507 | 235 | 12 | 1 | 481 | 1 | 434 | 2.38e-60 | 206 |
MS.gene84431.t1 | AT1G13730 | 31.690 | 426 | 232 | 11 | 1 | 414 | 1 | 379 | 1.33e-45 | 165 |
MS.gene84431.t1 | AT1G13730 | 31.690 | 426 | 232 | 11 | 1 | 414 | 1 | 379 | 1.33e-45 | 165 |
MS.gene84431.t1 | AT2G03640 | 30.800 | 500 | 249 | 18 | 3 | 487 | 2 | 419 | 2.56e-43 | 159 |
MS.gene84431.t1 | AT1G69250 | 33.333 | 384 | 206 | 14 | 1 | 377 | 1 | 341 | 3.95e-42 | 156 |
MS.gene84431.t1 | AT2G03640 | 30.938 | 501 | 246 | 19 | 3 | 487 | 2 | 418 | 5.43e-42 | 155 |
MS.gene84431.t1 | AT2G03640 | 30.938 | 501 | 246 | 19 | 3 | 487 | 2 | 418 | 5.43e-42 | 155 |
MS.gene84431.t1 | AT2G03640 | 30.938 | 501 | 246 | 19 | 3 | 487 | 2 | 418 | 5.43e-42 | 155 |
MS.gene84431.t1 | AT2G03640 | 33.333 | 372 | 192 | 13 | 3 | 367 | 2 | 324 | 1.41e-40 | 152 |
MS.gene84431.t1 | AT1G69250 | 32.468 | 385 | 207 | 14 | 1 | 382 | 1 | 335 | 1.10e-38 | 145 |
MS.gene84431.t1 | AT3G07250 | 30.221 | 407 | 198 | 16 | 10 | 395 | 3 | 344 | 2.38e-29 | 122 |
MS.gene84431.t1 | AT5G43960 | 28.289 | 456 | 258 | 15 | 15 | 443 | 11 | 424 | 1.86e-22 | 100 |
MS.gene84431.t1 | AT5G43960 | 28.297 | 364 | 196 | 12 | 106 | 443 | 41 | 365 | 6.99e-15 | 77.0 |
Find 148 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGGAAGGCCACTCAGTTTC+AGG | 0.164891 | 7.4:-49082008 | MS.gene84431:CDS |
TCTTCGGCACTTCTTCAATT+TGG | 0.175338 | 7.4:+49084347 | None:intergenic |
AATAGCCGTTCAGACTTTAA+TGG | 0.204493 | 7.4:-49081850 | MS.gene84431:CDS |
GAAGTCTACAATCCAGAAAA+TGG | 0.212664 | 7.4:-49084541 | MS.gene84431:CDS |
ATACTAGAACCATTTGTTTC+AGG | 0.227152 | 7.4:+49083967 | None:intergenic |
CTTCGGCACTTCTTCAATTT+GGG | 0.237490 | 7.4:+49084348 | None:intergenic |
GGAGTCATTGTCTTGGTCAC+TGG | 0.284606 | 7.4:-49084906 | MS.gene84431:CDS |
GAGAATATGTTCAAGAAGTT+TGG | 0.285207 | 7.4:-49083730 | MS.gene84431:CDS |
TTTAATGGAAGAGGGGAATA+TGG | 0.309866 | 7.4:-49081835 | MS.gene84431:CDS |
ATCTACCACTGCTCGTGTTC+CGG | 0.316044 | 7.4:-49081677 | MS.gene84431:CDS |
GGCAGAGGGCATGGAAACTA+TGG | 0.318726 | 7.4:-49082027 | MS.gene84431:CDS |
ACACGAGCAGTGGTAGATTT+AGG | 0.324177 | 7.4:+49081682 | None:intergenic |
GAGTCATTGTCTTGGTCACT+GGG | 0.328550 | 7.4:-49084905 | MS.gene84431:CDS |
TATGGAAATAGCCGAAGTTT+TGG | 0.332929 | 7.4:-49081958 | MS.gene84431:CDS |
TGGACACCGCCACTCTTGAT+AGG | 0.341350 | 7.4:+49083706 | None:intergenic |
CCGATGATACCATTTGATTC+AGG | 0.342113 | 7.4:+49085532 | None:intergenic |
GCAAGAGGGCATGGAAACTA+TGG | 0.365956 | 7.4:-49081976 | MS.gene84431:CDS |
GTGGATGCACAAGAGTCTTT+TGG | 0.375158 | 7.4:-49084933 | MS.gene84431:CDS |
GCTGCTTTCTGTGAATCATT+AGG | 0.376741 | 7.4:+49084463 | None:intergenic |
TACACAGAAGGTAGCTGAAT+TGG | 0.396416 | 7.4:-49084374 | MS.gene84431:CDS |
TACACAGAAGGTAGCTGAAT+TGG | 0.396416 | 7.4:-49084416 | MS.gene84431:CDS |
GGGAATATGGATATGGATAT+AGG | 0.400347 | 7.4:-49081822 | MS.gene84431:CDS |
ATACCTTTGCTGTCCTAACT+TGG | 0.400943 | 7.4:+49083686 | None:intergenic |
GGAAGAGGGGAATATGGATA+TGG | 0.401045 | 7.4:-49081829 | MS.gene84431:CDS |
AGGGCATGTGTAGCAGTTCC+AGG | 0.407057 | 7.4:+49083757 | None:intergenic |
TGGATATAGGAATGGCAATC+GGG | 0.426348 | 7.4:-49081809 | MS.gene84431:CDS |
ATGGATATAGGAATGGCAAT+CGG | 0.428631 | 7.4:-49081810 | MS.gene84431:CDS |
CACAGAAGCAGCTGTCATTA+CGG | 0.429670 | 7.4:+49084050 | None:intergenic |
TAAAACCTATGTACATGCTC+AGG | 0.431896 | 7.4:+49085580 | None:intergenic |
AGCATCATGTTACCATTCTC+AGG | 0.433770 | 7.4:+49084726 | None:intergenic |
TTCCTTGCTCCTCAAGAGAA+AGG | 0.437287 | 7.4:-49084834 | MS.gene84431:CDS |
TGACTGCTGAGGATGGTGAT+AGG | 0.438498 | 7.4:-49084573 | MS.gene84431:CDS |
AGTGTTGGATCCTCCTGTGC+TGG | 0.440145 | 7.4:-49084623 | MS.gene84431:CDS |
AGAGTGGCGGTGTCCAAGTT+AGG | 0.440879 | 7.4:-49083699 | MS.gene84431:CDS |
TTGGTCACTGGGTTTATGAT+AGG | 0.445866 | 7.4:-49084894 | MS.gene84431:CDS |
GACCGAGCTTACTGACATCT+TGG | 0.456560 | 7.4:+49085557 | None:intergenic |
GGTGGCCGCATGAATCGTAC+TGG | 0.460325 | 7.4:-49081727 | MS.gene84431:CDS |
AACAGTCGTGGAGACTATAA+TGG | 0.461729 | 7.4:-49081886 | MS.gene84431:CDS |
CGTTCAGACTTTAATGGAAG+AGG | 0.468224 | 7.4:-49081844 | MS.gene84431:CDS |
ATGGAGGCATATGATTTCTT+CGG | 0.469501 | 7.4:+49084331 | None:intergenic |
GCCACTCAGTTTCAGGGATG+AGG | 0.470258 | 7.4:-49082001 | MS.gene84431:CDS |
ATTTATTTGAGAGGGCTGCC+TGG | 0.473653 | 7.4:-49083775 | MS.gene84431:CDS |
TCAACAAGAACCTCAGGAAC+CGG | 0.474002 | 7.4:+49084490 | None:intergenic |
ACTCTTGTGCATCCACAGAT+AGG | 0.475539 | 7.4:+49084940 | None:intergenic |
TTCTGTTCAGGTTATGGCAG+AGG | 0.481492 | 7.4:-49082042 | MS.gene84431:CDS |
AAGTCTACAATCCAGAAAAT+GGG | 0.483272 | 7.4:-49084540 | MS.gene84431:CDS |
TGTTGATGAAAATGAAATCA+AGG | 0.484974 | 7.4:-49084781 | MS.gene84431:CDS |
TGACAAGAAGATACTGTCAA+TGG | 0.484996 | 7.4:-49084988 | MS.gene84431:CDS |
GATGAGGGAGCAAGAGGGCA+TGG | 0.486475 | 7.4:-49081985 | MS.gene84431:CDS |
GTTTATCAGGGATTTCACTT+TGG | 0.487116 | 7.4:-49083586 | MS.gene84431:intron |
GGAGATCCAATGTCATGATC+AGG | 0.490484 | 7.4:+49084756 | None:intergenic |
ACAAAGTAGCCTTTCTCTTG+AGG | 0.490719 | 7.4:+49084825 | None:intergenic |
ACGATTCATGCGGCCACCAT+TGG | 0.494198 | 7.4:+49081732 | None:intergenic |
GCTACCTTCTGTGTATCATC+AGG | 0.507667 | 7.4:+49084382 | None:intergenic |
GCTACCTTCTGTGTATCATC+AGG | 0.507667 | 7.4:+49084424 | None:intergenic |
GGAACTTGTGTCTCCAGCAC+AGG | 0.507872 | 7.4:+49084610 | None:intergenic |
ATAGATATACATACAACATC+AGG | 0.509761 | 7.4:+49085905 | None:intergenic |
GTGGCCGCATGAATCGTACT+GGG | 0.512111 | 7.4:-49081726 | MS.gene84431:CDS |
GCAGTCACAGATATTTGCTC+TGG | 0.513035 | 7.4:+49084589 | None:intergenic |
TGGAAGGCCACTCAGTTTCA+GGG | 0.515875 | 7.4:-49082007 | MS.gene84431:CDS |
GGAATTTCAACAAGAACCTC+AGG | 0.516382 | 7.4:+49084484 | None:intergenic |
CTCGGTCGTCCTGAATCAAA+TGG | 0.516738 | 7.4:-49085541 | MS.gene84431:CDS |
TCAGGTTATGGCAGAGGGCA+TGG | 0.518859 | 7.4:-49082036 | MS.gene84431:CDS |
TCCAGTGTGCCTGAAACAAA+TGG | 0.519573 | 7.4:-49083976 | MS.gene84431:CDS |
TACCAAGATGTCAGTAAGCT+CGG | 0.526213 | 7.4:-49085559 | MS.gene84431:CDS |
TTCAGAGAATCAAGTTCCTC+CGG | 0.526348 | 7.4:-49085930 | MS.gene84431:CDS |
GCTATTCAATTTATTTGAGA+GGG | 0.527276 | 7.4:-49083783 | MS.gene84431:CDS |
AATGATTCACAGAAAGCAGC+TGG | 0.531023 | 7.4:-49084460 | MS.gene84431:CDS |
GGCTATTCAATTTATTTGAG+AGG | 0.531523 | 7.4:-49083784 | MS.gene84431:CDS |
GACAAGAAGATACTGTCAAT+GGG | 0.533669 | 7.4:-49084987 | MS.gene84431:CDS |
ACCATTTGTTTCAGGCACAC+TGG | 0.537368 | 7.4:+49083975 | None:intergenic |
GTTCAGACTTTAATGGAAGA+GGG | 0.540785 | 7.4:-49081843 | MS.gene84431:CDS |
TCTCCCGCCTCTCCTGAGAA+TGG | 0.543122 | 7.4:-49084738 | MS.gene84431:intron |
CGTGTTCCGGCCTCTGCTTG+AGG | 0.544497 | 7.4:-49081664 | None:intergenic |
TCTGTTCAGGTTATGGCAGA+GGG | 0.545340 | 7.4:-49082041 | MS.gene84431:CDS |
TTACCATTCTCAGGAGAGGC+GGG | 0.546248 | 7.4:+49084735 | None:intergenic |
GTAGCTTAAGGTAATGAAAG+AGG | 0.550794 | 7.4:-49084088 | MS.gene84431:intron |
CCTGAATCAAATGGTATCAT+CGG | 0.550987 | 7.4:-49085532 | MS.gene84431:CDS |
GGATATAGGAATGGCAATCG+GGG | 0.554183 | 7.4:-49081808 | MS.gene84431:CDS |
TCTAGTATAAGTACTAATGA+AGG | 0.557933 | 7.4:-49083952 | MS.gene84431:CDS |
AAGGAACCTGATCATGACAT+TGG | 0.558690 | 7.4:-49084762 | MS.gene84431:CDS |
AGAGGCCGGAACACGAGCAG+TGG | 0.559072 | 7.4:+49081672 | None:intergenic |
TAGCTTCCTCAAGCAGAGGC+CGG | 0.560957 | 7.4:+49081658 | None:intergenic |
TGTTGAAGAAGAGGAAGCTC+CGG | 0.562145 | 7.4:-49084509 | MS.gene84431:CDS |
AGTCTCCACGGCCAAAACTT+CGG | 0.562377 | 7.4:+49081947 | None:intergenic |
TTCAGGGATGAGGGAGCAAG+AGG | 0.562453 | 7.4:-49081991 | MS.gene84431:CDS |
CCACTCAGTTTCAGGGATGA+GGG | 0.563881 | 7.4:-49082000 | MS.gene84431:CDS |
GACTGCTGAGGATGGTGATA+GGG | 0.564877 | 7.4:-49084572 | MS.gene84431:CDS |
AGTATAAGTACTAATGAAGG+TGG | 0.568379 | 7.4:-49083949 | MS.gene84431:CDS |
CGTGGAGACTACAATGGCCG+TGG | 0.570491 | 7.4:-49081934 | MS.gene84431:CDS |
CTCTTCCATTAAAGTCTGAA+CGG | 0.573202 | 7.4:+49081845 | None:intergenic |
GGCCGCATGAATCGTACTGG+GGG | 0.574140 | 7.4:-49081724 | MS.gene84431:CDS |
TTTGTTTCAGGCACACTGGA+TGG | 0.574807 | 7.4:+49083979 | None:intergenic |
TATGGATATGGATATAGGAA+TGG | 0.575183 | 7.4:-49081817 | MS.gene84431:CDS |
AGCCTTTCTCTTGAGGAGCA+AGG | 0.578397 | 7.4:+49084832 | None:intergenic |
GGACACCGCCACTCTTGATA+GGG | 0.579408 | 7.4:+49083707 | None:intergenic |
GCAAGTGTCTGTTGAAGAAG+AGG | 0.582143 | 7.4:-49084518 | MS.gene84431:CDS |
TCTGTGTATCATCAGGAACA+TGG | 0.586493 | 7.4:+49084389 | None:intergenic |
AATGATCACATGGGAACCAA+TGG | 0.597486 | 7.4:-49081748 | MS.gene84431:CDS |
GATCACATGGGAACCAATGG+TGG | 0.598618 | 7.4:-49081745 | MS.gene84431:CDS |
AAAACCTATGTACATGCTCA+GGG | 0.600667 | 7.4:+49085581 | None:intergenic |
TGGCCGCATGAATCGTACTG+GGG | 0.600883 | 7.4:-49081725 | MS.gene84431:CDS |
CGTGGAGACTATAATGGCCG+CGG | 0.602209 | 7.4:-49081880 | MS.gene84431:CDS |
AATGGCCGTGGCGACTACAA+TGG | 0.603350 | 7.4:-49081922 | MS.gene84431:CDS |
ACTTGTGTCTCCAGCACAGG+AGG | 0.604167 | 7.4:+49084613 | None:intergenic |
TCTTGAACATATTCTCAACA+AGG | 0.606195 | 7.4:+49083737 | None:intergenic |
GCAGCTGTCATTACGGAGGA+CGG | 0.611765 | 7.4:+49084057 | None:intergenic |
CCCTCATCCCTGAAACTGAG+TGG | 0.612765 | 7.4:+49082000 | None:intergenic |
GTTACCATTCTCAGGAGAGG+CGG | 0.614483 | 7.4:+49084734 | None:intergenic |
CGTGGCGACTACAATGGCCG+TGG | 0.614859 | 7.4:-49081916 | MS.gene84431:CDS |
CTGTGTATCATCAGGAACAT+GGG | 0.614865 | 7.4:+49084390 | None:intergenic |
CACGACTGTTATAGTCTCCA+CGG | 0.614892 | 7.4:+49081899 | None:intergenic |
ATACATACAACATCAGGTGC+CGG | 0.615319 | 7.4:+49085911 | None:intergenic |
GCAAATATCTGTGACTGCTG+AGG | 0.616027 | 7.4:-49084584 | MS.gene84431:CDS |
CACGGCCATTGTAGTCGCCA+CGG | 0.619653 | 7.4:+49081917 | None:intergenic |
CACGGCCATTGTAGTCTCCA+CGG | 0.619653 | 7.4:+49081935 | None:intergenic |
CACTGGGTTTATGATAGGAA+AGG | 0.619962 | 7.4:-49084889 | MS.gene84431:CDS |
TGCTGCGCTAAGTGCAATCG+AGG | 0.621802 | 7.4:-49083539 | MS.gene84431:intron |
AAAGCCCTGAGCATGTACAT+AGG | 0.622181 | 7.4:-49085585 | MS.gene84431:CDS |
ATATCTGTGACTGCTGAGGA+TGG | 0.626749 | 7.4:-49084580 | MS.gene84431:CDS |
AGAGGAAGCTCCGGTTCCTG+AGG | 0.635440 | 7.4:-49084500 | MS.gene84431:CDS |
TTCAGACTTTAATGGAAGAG+GGG | 0.635546 | 7.4:-49081842 | MS.gene84431:CDS |
TAGTGCGGAGATCCTATCTG+TGG | 0.636226 | 7.4:-49084952 | MS.gene84431:CDS |
GGAAACAATCAAGAAACTGA+AGG | 0.637783 | 7.4:-49083928 | MS.gene84431:intron |
TGTTCCTGATGATACACAGA+AGG | 0.641677 | 7.4:-49084386 | MS.gene84431:CDS |
TGTTCCTGATGATACACAGA+AGG | 0.641677 | 7.4:-49084428 | MS.gene84431:CDS |
GGAAGAGACTCTTACAATGG+AGG | 0.644795 | 7.4:+49084315 | None:intergenic |
CATCGGCATCACAACTACAA+TGG | 0.647447 | 7.4:-49085515 | MS.gene84431:CDS |
CATGTTACCATTCTCAGGAG+AGG | 0.648742 | 7.4:+49084731 | None:intergenic |
GGGTTATAGTGAACTTAGTG+CGG | 0.649351 | 7.4:-49084967 | MS.gene84431:CDS |
TCAGGGATGAGGGAGCAAGA+GGG | 0.650471 | 7.4:-49081990 | MS.gene84431:CDS |
AAGTTTGGCCCTATCAAGAG+TGG | 0.651104 | 7.4:-49083715 | MS.gene84431:CDS |
TATAGGAATGGCAATCGGGG+AGG | 0.652840 | 7.4:-49081805 | MS.gene84431:CDS |
CTTGAACATATTCTCAACAA+GGG | 0.657058 | 7.4:+49083738 | None:intergenic |
TTTGGCCGTGGAGACTACAA+TGG | 0.657644 | 7.4:-49081940 | MS.gene84431:CDS |
GAGGGCATGGAAACTATGGA+AGG | 0.657762 | 7.4:-49082023 | MS.gene84431:CDS |
CGTGGAGACTATAACAGTCG+TGG | 0.663202 | 7.4:-49081898 | MS.gene84431:CDS |
ATATCAGAGAAATGATCACA+TGG | 0.669840 | 7.4:-49081758 | MS.gene84431:CDS |
TGTATAGCTTCCTCAAGCAG+AGG | 0.677594 | 7.4:+49081654 | None:intergenic |
TGTCCAAGTTAGGACAGCAA+AGG | 0.677658 | 7.4:-49083689 | MS.gene84431:intron |
TCAGGCACACTGGATGGTGA+AGG | 0.681317 | 7.4:+49083985 | None:intergenic |
ATAGTAGTACTGTTCAACAA+AGG | 0.683995 | 7.4:+49085618 | None:intergenic |
TTTGGCCCTATCAAGAGTGG+CGG | 0.685024 | 7.4:-49083712 | MS.gene84431:CDS |
GCCGCATGAATCGTACTGGG+GGG | 0.690258 | 7.4:-49081723 | MS.gene84431:CDS |
TATCAGAGAAATGATCACAT+GGG | 0.696631 | 7.4:-49081757 | MS.gene84431:CDS |
CATACAACATCAGGTGCCGG+AGG | 0.709159 | 7.4:+49085914 | None:intergenic |
AGAAGCAGCTGTCATTACGG+AGG | 0.730010 | 7.4:+49084053 | None:intergenic |
AACGGCTATTGAAGTCTCCG+CGG | 0.748532 | 7.4:+49081863 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAAAAAAACAAAAAAACA+GGG | + | chr7.4:49083958-49083977 | None:intergenic | 10.0% |
!! | TTTAAAAAAAACAAAAAAAC+AGG | + | chr7.4:49083959-49083978 | None:intergenic | 10.0% |
!!! | AATAAAATGTTTTTAAAACT+TGG | - | chr7.4:49084942-49084961 | MS.gene84431:CDS | 10.0% |
!!! | TTTATTATGTTATATTTTGT+GGG | - | chr7.4:49085268-49085287 | MS.gene84431:intron | 10.0% |
!!! | TTTCTTATTTTGATATTATA+CGG | - | chr7.4:49085355-49085374 | MS.gene84431:intron | 10.0% |
!!! | TTTTATTATGTTATATTTTG+TGG | - | chr7.4:49085267-49085286 | MS.gene84431:intron | 10.0% |
!! | AACTTAGATTCTAATAAATA+TGG | - | chr7.4:49082485-49082504 | MS.gene84431:intron | 15.0% |
!! | ACAATGGAAATAAATTTAAA+AGG | + | chr7.4:49082440-49082459 | None:intergenic | 15.0% |
!! | ATGATAACTATGAAATTTAT+TGG | - | chr7.4:49084746-49084765 | MS.gene84431:CDS | 15.0% |
!! | CATACATATACATATATATA+TGG | + | chr7.4:49083711-49083730 | None:intergenic | 15.0% |
!! | TGATAACTATGAAATTTATT+GGG | - | chr7.4:49084747-49084766 | MS.gene84431:CDS | 15.0% |
!!! | TTATTATGTTATATTTTGTG+GGG | - | chr7.4:49085269-49085288 | MS.gene84431:intron | 15.0% |
!! | AAAAAGAATTTAACCCTTTA+CGG | + | chr7.4:49084440-49084459 | None:intergenic | 20.0% |
!! | ATTATGTTATGTTGTCTTTA+AGG | - | chr7.4:49084414-49084433 | MS.gene84431:CDS | 20.0% |
!! | TAACATTTACAATGAAAACT+CGG | + | chr7.4:49083357-49083376 | None:intergenic | 20.0% |
!! | TAATATAAACCATCAAAAAG+TGG | + | chr7.4:49085045-49085064 | None:intergenic | 20.0% |
!! | TAGAATCTAAGTTAACAAAT+GGG | + | chr7.4:49082478-49082497 | None:intergenic | 20.0% |
!! | TATTTATTGATGTGTTCAAT+TGG | - | chr7.4:49083778-49083797 | MS.gene84431:CDS | 20.0% |
!! | TTAGAATCTAAGTTAACAAA+TGG | + | chr7.4:49082479-49082498 | None:intergenic | 20.0% |
!!! | AGTGTTTTTTTATTTAGTAC+TGG | - | chr7.4:49084684-49084703 | MS.gene84431:intron | 20.0% |
!!! | ATAACTTTTTGGCATATTAA+TGG | - | chr7.4:49083995-49084014 | MS.gene84431:CDS | 20.0% |
!!! | ATTTTTAATGTGATTGGTTT+AGG | - | chr7.4:49081954-49081973 | MS.gene84431:CDS | 20.0% |
!!! | CTTTAATTTGCATCTTTATT+TGG | - | chr7.4:49084567-49084586 | MS.gene84431:CDS | 20.0% |
!!! | GTTTTAAAAAGGATACAAAA+TGG | - | chr7.4:49085134-49085153 | MS.gene84431:intron | 20.0% |
!!! | TAACTTTTTGGCATATTAAT+GGG | - | chr7.4:49083996-49084015 | MS.gene84431:CDS | 20.0% |
!!! | TTGCTTTTTTATTTGGTTTT+TGG | - | chr7.4:49084483-49084502 | MS.gene84431:CDS | 20.0% |
! | AAAAGTTATCACAACAAAGT+TGG | + | chr7.4:49085250-49085269 | None:intergenic | 25.0% |
! | AAACAATAATAAGAAGTCCT+TGG | + | chr7.4:49085403-49085422 | None:intergenic | 25.0% |
! | AAGATATTGTACAAACCAAT+TGG | + | chr7.4:49082255-49082274 | None:intergenic | 25.0% |
! | AATAAGCAACTTAAGTTAAC+AGG | + | chr7.4:49082945-49082964 | None:intergenic | 25.0% |
! | AGAAATCTCTTTACAACTTA+TGG | + | chr7.4:49084807-49084826 | None:intergenic | 25.0% |
! | ATAGATATACATACAACATC+AGG | + | chr7.4:49081702-49081721 | None:intergenic | 25.0% |
! | CTACATGCAAATAAATAGAA+AGG | + | chr7.4:49084278-49084297 | None:intergenic | 25.0% |
! | GCTATTCAATTTATTTGAGA+GGG | - | chr7.4:49083821-49083840 | MS.gene84431:intron | 25.0% |
! | TCAATATTCATATCTCCAAT+TGG | - | chr7.4:49082237-49082256 | MS.gene84431:intron | 25.0% |
! | TCTAGTATAAGTACTAATGA+AGG | - | chr7.4:49083652-49083671 | MS.gene84431:intron | 25.0% |
! | TTGTACAAAATAGTGTTTAG+CGG | - | chr7.4:49081839-49081858 | MS.gene84431:CDS | 25.0% |
!! | AATACTTTTATCTGCATTTC+AGG | - | chr7.4:49084595-49084614 | MS.gene84431:CDS | 25.0% |
!! | TGTTGATGAAAATGAAATCA+AGG | - | chr7.4:49082823-49082842 | MS.gene84431:intron | 25.0% |
!! | TTATTATTTTCCTCTGTAAC+TGG | - | chr7.4:49083483-49083502 | MS.gene84431:intron | 25.0% |
!!! | CTCTGAAATAATTTCTTTCT+GGG | + | chr7.4:49085452-49085471 | None:intergenic | 25.0% |
!!! | TAATATGCTTTTTTGTAGCT+GGG | + | chr7.4:49085193-49085212 | None:intergenic | 25.0% |
!!! | TGACTGATTTTTAATGTGAT+TGG | - | chr7.4:49081948-49081967 | MS.gene84431:CDS | 25.0% |
AAACAATTACACCAATGCAT+AGG | + | chr7.4:49082336-49082355 | None:intergenic | 30.0% | |
AAAGGAAAAGAGGGAATTTA+TGG | + | chr7.4:49083313-49083332 | None:intergenic | 30.0% | |
AAATCCTTGTACACTATTGA+GGG | - | chr7.4:49085112-49085131 | MS.gene84431:intron | 30.0% | |
AAATTTATTGGGTTCGTGTA+TGG | - | chr7.4:49084758-49084777 | MS.gene84431:CDS | 30.0% | |
AAGTCTACAATCCAGAAAAT+GGG | - | chr7.4:49083064-49083083 | MS.gene84431:intron | 30.0% | |
AATATCACTATGATAAACGC+AGG | + | chr7.4:49083762-49083781 | None:intergenic | 30.0% | |
AATCGCTATTTGACAACATT+GGG | - | chr7.4:49081887-49081906 | MS.gene84431:CDS | 30.0% | |
AATTTCACTGTAGAACAAGA+TGG | + | chr7.4:49084189-49084208 | None:intergenic | 30.0% | |
AGTATAAGTACTAATGAAGG+TGG | - | chr7.4:49083655-49083674 | MS.gene84431:intron | 30.0% | |
ATACTAGAACCATTTGTTTC+AGG | + | chr7.4:49083640-49083659 | None:intergenic | 30.0% | |
ATAGTAGTACTGTTCAACAA+AGG | + | chr7.4:49081989-49082008 | None:intergenic | 30.0% | |
ATATCACTATGATAAACGCA+GGG | + | chr7.4:49083761-49083780 | None:intergenic | 30.0% | |
ATATCAGAGAAATGATCACA+TGG | - | chr7.4:49085846-49085865 | MS.gene84431:intron | 30.0% | |
CACCATTTCTCATAATTACA+GGG | - | chr7.4:49084885-49084904 | MS.gene84431:CDS | 30.0% | |
CATTACCTTCAATAAATTGC+TGG | - | chr7.4:49084861-49084880 | MS.gene84431:CDS | 30.0% | |
CCAGAAAGAAATTATTTCAG+AGG | - | chr7.4:49085450-49085469 | MS.gene84431:intron | 30.0% | |
CTTGAACATATTCTCAACAA+GGG | + | chr7.4:49083869-49083888 | None:intergenic | 30.0% | |
CTTTATAGCTGTCTATGTAT+TGG | - | chr7.4:49082151-49082170 | MS.gene84431:intron | 30.0% | |
GAGAATATGTTCAAGAAGTT+TGG | - | chr7.4:49083874-49083893 | MS.gene84431:intron | 30.0% | |
GGCTATTCAATTTATTTGAG+AGG | - | chr7.4:49083820-49083839 | MS.gene84431:intron | 30.0% | |
GTTAACAAATGGGAATTTAG+AGG | + | chr7.4:49082468-49082487 | None:intergenic | 30.0% | |
TAAATCCTTGTACACTATTG+AGG | - | chr7.4:49085111-49085130 | MS.gene84431:intron | 30.0% | |
TAACCATGTTGTAATACTCT+TGG | - | chr7.4:49082289-49082308 | MS.gene84431:intron | 30.0% | |
TAATCGCTATTTGACAACAT+TGG | - | chr7.4:49081886-49081905 | MS.gene84431:CDS | 30.0% | |
TACACTAGTTGTTGAACAAA+AGG | + | chr7.4:49084993-49085012 | None:intergenic | 30.0% | |
TACCCTGTAATTATGAGAAA+TGG | + | chr7.4:49084890-49084909 | None:intergenic | 30.0% | |
TAGTTATCATGTGCAGAAAT+AGG | + | chr7.4:49084736-49084755 | None:intergenic | 30.0% | |
TATCAACTCCATAATGTCTT+TGG | + | chr7.4:49084917-49084936 | None:intergenic | 30.0% | |
TATCAGAGAAATGATCACAT+GGG | - | chr7.4:49085847-49085866 | MS.gene84431:intron | 30.0% | |
TATGGATATGGATATAGGAA+TGG | - | chr7.4:49085787-49085806 | MS.gene84431:intron | 30.0% | |
TATTCTTGACTCTATTACAC+TGG | - | chr7.4:49083384-49083403 | MS.gene84431:intron | 30.0% | |
TCTTGAACATATTCTCAACA+AGG | + | chr7.4:49083870-49083889 | None:intergenic | 30.0% | |
TTTCAAATCCTTGTACACTA+TGG | - | chr7.4:49085081-49085100 | MS.gene84431:intron | 30.0% | |
! | AAACTTTTGGCATACAACTA+GGG | - | chr7.4:49085485-49085504 | MS.gene84431:intron | 30.0% |
! | TACTGGTTAATTTCACATCA+AGG | - | chr7.4:49084701-49084720 | MS.gene84431:intron | 30.0% |
! | TTATATTTTGTGGGGTTCAT+TGG | - | chr7.4:49085277-49085296 | MS.gene84431:intron | 30.0% |
! | TTTTCAAATAACGCCTATAG+CGG | + | chr7.4:49081815-49081834 | None:intergenic | 30.0% |
!! | AAGTCTCAAAGGTATTGATT+TGG | - | chr7.4:49085019-49085038 | MS.gene84431:intron | 30.0% |
!! | CCTCTGAAATAATTTCTTTC+TGG | + | chr7.4:49085453-49085472 | None:intergenic | 30.0% |
!! | GCATATTAATGGGTTTATCA+GGG | - | chr7.4:49084006-49084025 | MS.gene84431:CDS | 30.0% |
!! | TTAATGTGATTGGTTTAGGT+TGG | - | chr7.4:49081958-49081977 | MS.gene84431:CDS | 30.0% |
!!! | CACTATTGAGGGTTTTAAAA+AGG | - | chr7.4:49085123-49085142 | MS.gene84431:intron | 30.0% |
!!! | CACTTCGTTGCTTTTTTATT+TGG | - | chr7.4:49084476-49084495 | MS.gene84431:CDS | 30.0% |
!!! | GTAATATGCTTTTTTGTAGC+TGG | + | chr7.4:49085194-49085213 | None:intergenic | 30.0% |
!!! | TTAAGGCGTGGTTTTATTAA+GGG | - | chr7.4:49082900-49082919 | MS.gene84431:intron | 30.0% |
AAAACACTCCATAGTGTACA+AGG | + | chr7.4:49085092-49085111 | None:intergenic | 35.0% | |
AAAACCCTCAATAGTGTACA+AGG | + | chr7.4:49085119-49085138 | None:intergenic | 35.0% | |
AAAACCTATGTACATGCTCA+GGG | + | chr7.4:49082026-49082045 | None:intergenic | 35.0% | |
AAAATGCACACAAGAACCAA+AGG | + | chr7.4:49082202-49082221 | None:intergenic | 35.0% | |
AAAGAGCAAGAAAGGAAAAG+AGG | + | chr7.4:49083323-49083342 | None:intergenic | 35.0% | |
AAATGCACACAAGAACCAAA+GGG | + | chr7.4:49082201-49082220 | None:intergenic | 35.0% | |
AAGAGCAAGAAAGGAAAAGA+GGG | + | chr7.4:49083322-49083341 | None:intergenic | 35.0% | |
AATAGCCGTTCAGACTTTAA+TGG | - | chr7.4:49085754-49085773 | MS.gene84431:intron | 35.0% | |
ATGGATATAGGAATGGCAAT+CGG | - | chr7.4:49085794-49085813 | MS.gene84431:intron | 35.0% | |
ATTTGCATGTAGTGTTTGTG+TGG | - | chr7.4:49084286-49084305 | MS.gene84431:intron | 35.0% | |
CAAACACAATGAGAACTTAG+TGG | + | chr7.4:49084338-49084357 | None:intergenic | 35.0% | |
CACTAAGTTCTCATTGTGTT+TGG | - | chr7.4:49084336-49084355 | MS.gene84431:CDS | 35.0% | |
CATACAATGTTGTGAATCGT+GGG | - | chr7.4:49081737-49081756 | MS.gene84431:CDS | 35.0% | |
CATGTGCAGAAATAGGAATT+TGG | + | chr7.4:49084729-49084748 | None:intergenic | 35.0% | |
CCACCATTTCTCATAATTAC+AGG | - | chr7.4:49084884-49084903 | MS.gene84431:CDS | 35.0% | |
CCAGGACACATGAAAATTAA+GGG | + | chr7.4:49084362-49084381 | None:intergenic | 35.0% | |
CCTGAATCAAATGGTATCAT+CGG | - | chr7.4:49082072-49082091 | MS.gene84431:intron | 35.0% | |
CCTGTAATTATGAGAAATGG+TGG | + | chr7.4:49084887-49084906 | None:intergenic | 35.0% | |
CTAGTTGTATGCCAAAAGTT+TGG | + | chr7.4:49085486-49085505 | None:intergenic | 35.0% | |
CTCTTCCATTAAAGTCTGAA+CGG | + | chr7.4:49085762-49085781 | None:intergenic | 35.0% | |
GAAGTCTACAATCCAGAAAA+TGG | - | chr7.4:49083063-49083082 | MS.gene84431:intron | 35.0% | |
GAATGGTAACATGATGCTTA+AGG | - | chr7.4:49082883-49082902 | MS.gene84431:intron | 35.0% | |
GAATTTAGAGGATCGTACAA+TGG | + | chr7.4:49082456-49082475 | None:intergenic | 35.0% | |
GACAACATAACATAATCCAG+TGG | + | chr7.4:49084410-49084429 | None:intergenic | 35.0% | |
GACAAGAAGATACTGTCAAT+GGG | - | chr7.4:49082617-49082636 | MS.gene84431:intron | 35.0% | |
GGAAACAATCAAGAAACTGA+AGG | - | chr7.4:49083676-49083695 | MS.gene84431:intron | 35.0% | |
GGGAATATGGATATGGATAT+AGG | - | chr7.4:49085782-49085801 | MS.gene84431:intron | 35.0% | |
GTAGAGCTGAAATGTTGATA+AGG | + | chr7.4:49085381-49085400 | None:intergenic | 35.0% | |
GTAGCTTAAGGTAATGAAAG+AGG | - | chr7.4:49083516-49083535 | MS.gene84431:intron | 35.0% | |
GTTCAGACTTTAATGGAAGA+GGG | - | chr7.4:49085761-49085780 | MS.gene84431:intron | 35.0% | |
GTTTATCAGGGATTTCACTT+TGG | - | chr7.4:49084018-49084037 | MS.gene84431:CDS | 35.0% | |
GTTTCTTTCTACAAATCCAC+AGG | - | chr7.4:49084146-49084165 | MS.gene84431:intron | 35.0% | |
TAAAACCTATGTACATGCTC+AGG | + | chr7.4:49082027-49082046 | None:intergenic | 35.0% | |
TAAAGAGATTTCTCTCACAC+TGG | - | chr7.4:49084814-49084833 | MS.gene84431:CDS | 35.0% | |
TACATATCCAGACCAATGTT+CGG | + | chr7.4:49082370-49082389 | None:intergenic | 35.0% | |
TATGGAAGAGACTCTTACAA+TGG | + | chr7.4:49083295-49083314 | None:intergenic | 35.0% | |
TATTTCAAACCTCCGAACAT+TGG | - | chr7.4:49082355-49082374 | MS.gene84431:intron | 35.0% | |
TCATACAATGTTGTGAATCG+TGG | - | chr7.4:49081736-49081755 | MS.gene84431:CDS | 35.0% | |
TGACAAGAAGATACTGTCAA+TGG | - | chr7.4:49082616-49082635 | MS.gene84431:intron | 35.0% | |
TTCAGACTTTAATGGAAGAG+GGG | - | chr7.4:49085762-49085781 | MS.gene84431:intron | 35.0% | |
TTTAATGGAAGAGGGGAATA+TGG | - | chr7.4:49085769-49085788 | MS.gene84431:intron | 35.0% | |
TTTCTTATGCTTCTGAGTTG+TGG | - | chr7.4:49084248-49084267 | MS.gene84431:intron | 35.0% | |
! | ATGGAGGCATATGATTTCTT+CGG | + | chr7.4:49083276-49083295 | None:intergenic | 35.0% |
! | CAAACTTTTGGCATACAACT+AGG | - | chr7.4:49085484-49085503 | MS.gene84431:intron | 35.0% |
! | GCTGCTAGCTAATAACTTTT+TGG | - | chr7.4:49083984-49084003 | MS.gene84431:CDS | 35.0% |
! | GTGTAGATTTGAAGTCTCAA+AGG | - | chr7.4:49085008-49085027 | MS.gene84431:intron | 35.0% |
! | TATGGATTGAGTGTTAGAAG+TGG | - | chr7.4:49082503-49082522 | MS.gene84431:intron | 35.0% |
! | TTATTTTCCTCTGTAACTGG+TGG | - | chr7.4:49083486-49083505 | MS.gene84431:intron | 35.0% |
!! | AAAGGCATCAGCAAGTAATT+AGG | + | chr7.4:49082422-49082441 | None:intergenic | 35.0% |
!! | CAAAACTTCTAAAATCAGCC+AGG | + | chr7.4:49084380-49084399 | None:intergenic | 35.0% |
!! | GGCATATTAATGGGTTTATC+AGG | - | chr7.4:49084005-49084024 | MS.gene84431:CDS | 35.0% |
!! | GTGCAATCGAGGTATTTTAT+TGG | - | chr7.4:49084076-49084095 | MS.gene84431:CDS | 35.0% |
!! | TGCATTTTCTGTTCAGGTTA+TGG | - | chr7.4:49085556-49085575 | MS.gene84431:CDS | 35.0% |
!!! | CTTAAGGCGTGGTTTTATTA+AGG | - | chr7.4:49082899-49082918 | MS.gene84431:intron | 35.0% |
!!! | GAAGTTTTGTTCATTACCAC+TGG | - | chr7.4:49084391-49084410 | MS.gene84431:CDS | 35.0% |
!!! | TTGATTTGGCCACTTTTTGA+TGG | - | chr7.4:49085033-49085052 | MS.gene84431:intron | 35.0% |
AACAGTCGTGGAGACTATAA+TGG | - | chr7.4:49085718-49085737 | MS.gene84431:intron | 40.0% | |
AAGGAACCTGATCATGACAT+TGG | - | chr7.4:49082842-49082861 | MS.gene84431:intron | 40.0% | |
AATGATCACATGGGAACCAA+TGG | - | chr7.4:49085856-49085875 | MS.gene84431:intron | 40.0% | |
AATGATTCACAGAAAGCAGC+TGG | - | chr7.4:49083144-49083163 | MS.gene84431:intron | 40.0% | |
ACAAAGTAGCCTTTCTCTTG+AGG | + | chr7.4:49082782-49082801 | None:intergenic | 40.0% | |
ACACCAATGCATAGGCATAT+GGG | + | chr7.4:49082328-49082347 | None:intergenic | 40.0% | |
ACTGTAGAACAAGATGGCAA+AGG | + | chr7.4:49084183-49084202 | None:intergenic | 40.0% | |
AGCATCATGTTACCATTCTC+AGG | + | chr7.4:49082881-49082900 | None:intergenic | 40.0% | |
ATACATACAACATCAGGTGC+CGG | + | chr7.4:49081696-49081715 | None:intergenic | 40.0% | |
CAACTCCATAATGTCTTTGG+AGG | + | chr7.4:49084914-49084933 | None:intergenic | 40.0% | |
CAACTTATGGCATGCAAACA+AGG | + | chr7.4:49084794-49084813 | None:intergenic | 40.0% | |
CAATCAAGAAACTGAAGGTC+TGG | - | chr7.4:49083681-49083700 | MS.gene84431:intron | 40.0% | |
CACTGGGTTTATGATAGGAA+AGG | - | chr7.4:49082715-49082734 | MS.gene84431:intron | 40.0% | |
CATCAGCAAGTAATTAGGTG+GGG | + | chr7.4:49082417-49082436 | None:intergenic | 40.0% | |
CCGATGATACCATTTGATTC+AGG | + | chr7.4:49082075-49082094 | None:intergenic | 40.0% | |
CCTATTTCATTTCACCAAGC+AGG | - | chr7.4:49082589-49082608 | MS.gene84431:intron | 40.0% | |
CGTTCAGACTTTAATGGAAG+AGG | - | chr7.4:49085760-49085779 | MS.gene84431:intron | 40.0% | |
CTGTGTATCATCAGGAACAT+GGG | + | chr7.4:49083175-49083194 | None:intergenic | 40.0% | |
CTTCGGCACTTCTTCAATTT+GGG | + | chr7.4:49083259-49083278 | None:intergenic | 40.0% | |
CTTCTTGTCAATTTCCTGCT+TGG | + | chr7.4:49082606-49082625 | None:intergenic | 40.0% | |
GAAAAGAGGTCAACTAATCG+AGG | - | chr7.4:49084659-49084678 | MS.gene84431:intron | 40.0% | |
GAGTCTAGAAAGAGCAAGAA+AGG | + | chr7.4:49083331-49083350 | None:intergenic | 40.0% | |
GCATCAGCAAGTAATTAGGT+GGG | + | chr7.4:49082418-49082437 | None:intergenic | 40.0% | |
GCCAGGACACATGAAAATTA+AGG | + | chr7.4:49084363-49084382 | None:intergenic | 40.0% | |
GGAATTTCAACAAGAACCTC+AGG | + | chr7.4:49083123-49083142 | None:intergenic | 40.0% | |
GGGTTATAGTGAACTTAGTG+CGG | - | chr7.4:49082637-49082656 | MS.gene84431:intron | 40.0% | |
TACACAGAAGGTAGCTGAAT+TGG | - | chr7.4:49083188-49083207 | MS.gene84431:intron | 40.0% | |
TACACCAATGCATAGGCATA+TGG | + | chr7.4:49082329-49082348 | None:intergenic | 40.0% | |
TACCAAGATGTCAGTAAGCT+CGG | - | chr7.4:49082045-49082064 | MS.gene84431:CDS | 40.0% | |
TAGTGCTATAGTTCCGCTAT+AGG | - | chr7.4:49081799-49081818 | MS.gene84431:CDS | 40.0% | |
TCAACATTTCAGCTCTACCA+AGG | - | chr7.4:49085383-49085402 | MS.gene84431:intron | 40.0% | |
TCTGTGTATCATCAGGAACA+TGG | + | chr7.4:49083176-49083195 | None:intergenic | 40.0% | |
TCTTCGGCACTTCTTCAATT+TGG | + | chr7.4:49083260-49083279 | None:intergenic | 40.0% | |
TGACGGTCATTGATCAGAAT+TGG | + | chr7.4:49084626-49084645 | None:intergenic | 40.0% | |
TGCCAAAAGTTTGGCAATAC+AGG | + | chr7.4:49085477-49085496 | None:intergenic | 40.0% | |
TGGATATAGGAATGGCAATC+GGG | - | chr7.4:49085795-49085814 | MS.gene84431:intron | 40.0% | |
TGTTCCTGATGATACACAGA+AGG | - | chr7.4:49083176-49083195 | MS.gene84431:intron | 40.0% | |
TTCAGAGAATCAAGTTCCTC+CGG | - | chr7.4:49081674-49081693 | MS.gene84431:CDS | 40.0% | |
TTGGTCACTGGGTTTATGAT+AGG | - | chr7.4:49082710-49082729 | MS.gene84431:intron | 40.0% | |
! | ATACCTTTGCTGTCCTAACT+TGG | + | chr7.4:49083921-49083940 | None:intergenic | 40.0% |
! | CCCTTAATTTTCATGTGTCC+TGG | - | chr7.4:49084359-49084378 | MS.gene84431:CDS | 40.0% |
! | CCTGCTTGGTGAAATGAAAT+AGG | + | chr7.4:49082592-49082611 | None:intergenic | 40.0% |
! | GCTGCTTTCTGTGAATCATT+AGG | + | chr7.4:49083144-49083163 | None:intergenic | 40.0% |
! | GCTGTTTGCATTTTCTGTTC+AGG | - | chr7.4:49085550-49085569 | MS.gene84431:CDS | 40.0% |
! | GTCCTGTATTGCCAAACTTT+TGG | - | chr7.4:49085472-49085491 | MS.gene84431:intron | 40.0% |
! | TCGTGGGTTACAGAAAATAG+CGG | - | chr7.4:49081753-49081772 | MS.gene84431:CDS | 40.0% |
! | TGCGATCGTCTGATTTGTAT+TGG | - | chr7.4:49084518-49084537 | MS.gene84431:CDS | 40.0% |
!! | GACAGCAAAGGTATTTCACT+TGG | - | chr7.4:49083927-49083946 | MS.gene84431:intron | 40.0% |
!! | GAGCCAAGAGTATTACAACA+TGG | + | chr7.4:49082295-49082314 | None:intergenic | 40.0% |
!! | GTTGTCTTTAAGGCCGTAAA+GGG | - | chr7.4:49084424-49084443 | MS.gene84431:CDS | 40.0% |
!! | TGTTGTCTTTAAGGCCGTAA+AGG | - | chr7.4:49084423-49084442 | MS.gene84431:CDS | 40.0% |
!!! | GGGATTTCACTTTGGTTTTG+TGG | - | chr7.4:49084026-49084045 | MS.gene84431:CDS | 40.0% |
!!! | TGGTTTTGTGGAGTTTGAAG+AGG | - | chr7.4:49084038-49084057 | MS.gene84431:CDS | 40.0% |
AAAGCCCTGAGCATGTACAT+AGG | - | chr7.4:49082019-49082038 | MS.gene84431:CDS | 45.0% | |
AACAGATCCACCAGTTACAG+AGG | + | chr7.4:49083496-49083515 | None:intergenic | 45.0% | |
AAGTTTGGCCCTATCAAGAG+TGG | - | chr7.4:49083889-49083908 | MS.gene84431:intron | 45.0% | |
AATAGCCCTCAGCTGTCAAA+AGG | + | chr7.4:49083807-49083826 | None:intergenic | 45.0% | |
ACACCCATATGCCTATGCAT+TGG | - | chr7.4:49082322-49082341 | MS.gene84431:intron | 45.0% | |
ACACGAGCAGTGGTAGATTT+AGG | + | chr7.4:49085925-49085944 | None:intergenic | 45.0% | |
ACCATTTGTTTCAGGCACAC+TGG | + | chr7.4:49083632-49083651 | None:intergenic | 45.0% | |
ACGTTGTGGTAGAGGAAAAG+AGG | - | chr7.4:49084645-49084664 | MS.gene84431:intron | 45.0% | |
ACTCTTGTGCATCCACAGAT+AGG | + | chr7.4:49082667-49082686 | None:intergenic | 45.0% | |
ATATCCAGACCAATGTTCGG+AGG | + | chr7.4:49082367-49082386 | None:intergenic | 45.0% | |
ATATCTGTGACTGCTGAGGA+TGG | - | chr7.4:49083024-49083043 | MS.gene84431:intron | 45.0% | |
ATGGCATGCAAACAAGGAAC+AGG | + | chr7.4:49084788-49084807 | None:intergenic | 45.0% | |
ATTTATTTGAGAGGGCTGCC+TGG | - | chr7.4:49083829-49083848 | MS.gene84431:intron | 45.0% | |
CACAGAAGCAGCTGTCATTA+CGG | + | chr7.4:49083557-49083576 | None:intergenic | 45.0% | |
CACGACTGTTATAGTCTCCA+CGG | + | chr7.4:49085708-49085727 | None:intergenic | 45.0% | |
CATACCTCATGTGTACCCTT+TGG | - | chr7.4:49082183-49082202 | MS.gene84431:intron | 45.0% | |
CATCGGCATCACAACTACAA+TGG | - | chr7.4:49082089-49082108 | MS.gene84431:intron | 45.0% | |
CATGTTACCATTCTCAGGAG+AGG | + | chr7.4:49082876-49082895 | None:intergenic | 45.0% | |
CCAACACTGAAAGAAGGTTG+AGG | + | chr7.4:49082969-49082988 | None:intergenic | 45.0% | |
CCTCAACCTTCTTTCAGTGT+TGG | - | chr7.4:49082966-49082985 | MS.gene84431:intron | 45.0% | |
GAGGATCCAACACTGAAAGA+AGG | + | chr7.4:49082975-49082994 | None:intergenic | 45.0% | |
GAGTCATTGTCTTGGTCACT+GGG | - | chr7.4:49082699-49082718 | MS.gene84431:intron | 45.0% | |
GCAAATATCTGTGACTGCTG+AGG | - | chr7.4:49083020-49083039 | MS.gene84431:intron | 45.0% | |
GCAAGTGTCTGTTGAAGAAG+AGG | - | chr7.4:49083086-49083105 | MS.gene84431:intron | 45.0% | |
GCAGTCACAGATATTTGCTC+TGG | + | chr7.4:49083018-49083037 | None:intergenic | 45.0% | |
GCTACCTTCTGTGTATCATC+AGG | + | chr7.4:49083183-49083202 | None:intergenic | 45.0% | |
GGAAGAGACTCTTACAATGG+AGG | + | chr7.4:49083292-49083311 | None:intergenic | 45.0% | |
GGAAGAGGGGAATATGGATA+TGG | - | chr7.4:49085775-49085794 | MS.gene84431:intron | 45.0% | |
GGAGATCCAATGTCATGATC+AGG | + | chr7.4:49082851-49082870 | None:intergenic | 45.0% | |
GGATATAGGAATGGCAATCG+GGG | - | chr7.4:49085796-49085815 | MS.gene84431:intron | 45.0% | |
GGCATCAGCAAGTAATTAGG+TGG | + | chr7.4:49082419-49082438 | None:intergenic | 45.0% | |
GGTAGCCTCCAAAGACATTA+TGG | - | chr7.4:49084906-49084925 | MS.gene84431:CDS | 45.0% | |
GGTGGATCTGTTGTAGCTTA+AGG | - | chr7.4:49083504-49083523 | MS.gene84431:intron | 45.0% | |
GGTGGCCAGCAATTTATTGA+AGG | + | chr7.4:49084869-49084888 | None:intergenic | 45.0% | |
GTAACATGATGCTTAAGGCG+TGG | - | chr7.4:49082888-49082907 | MS.gene84431:intron | 45.0% | |
TCAACAAGAACCTCAGGAAC+CGG | + | chr7.4:49083117-49083136 | None:intergenic | 45.0% | |
TCCAGTGTGCCTGAAACAAA+TGG | - | chr7.4:49083628-49083647 | MS.gene84431:intron | 45.0% | |
TGTCCAAGTTAGGACAGCAA+AGG | - | chr7.4:49083915-49083934 | MS.gene84431:intron | 45.0% | |
TGTTGAAGAAGAGGAAGCTC+CGG | - | chr7.4:49083095-49083114 | MS.gene84431:intron | 45.0% | |
TTCCTTGCTCCTCAAGAGAA+AGG | - | chr7.4:49082770-49082789 | MS.gene84431:intron | 45.0% | |
TTTCCTCTACCACAACGTGA+CGG | + | chr7.4:49084643-49084662 | None:intergenic | 45.0% | |
TTTGTTTCAGGCACACTGGA+TGG | + | chr7.4:49083628-49083647 | None:intergenic | 45.0% | |
! | ACAGACACTTGCCCATTTTC+TGG | + | chr7.4:49083078-49083097 | None:intergenic | 45.0% |
! | AGAACCAAAGGGTACACATG+AGG | + | chr7.4:49082190-49082209 | None:intergenic | 45.0% |
! | ATGCACAAGAGTCTTTTGGC+GGG | - | chr7.4:49082675-49082694 | MS.gene84431:intron | 45.0% |
! | GATGCACAAGAGTCTTTTGG+CGG | - | chr7.4:49082674-49082693 | MS.gene84431:intron | 45.0% |
! | GTGGATGCACAAGAGTCTTT+TGG | - | chr7.4:49082671-49082690 | MS.gene84431:intron | 45.0% |
! | TCTGTTCAGGTTATGGCAGA+GGG | - | chr7.4:49085563-49085582 | MS.gene84431:CDS | 45.0% |
! | TTCTGTTCAGGTTATGGCAG+AGG | - | chr7.4:49085562-49085581 | MS.gene84431:CDS | 45.0% |
!!! | CTTTTTTGTAGCTGGGTGCT+AGG | + | chr7.4:49085186-49085205 | None:intergenic | 45.0% |
AAAGGAGCAACATGTGCCTG+TGG | + | chr7.4:49084165-49084184 | None:intergenic | 50.0% | |
AACGGCTATTGAAGTCTCCG+CGG | + | chr7.4:49085744-49085763 | None:intergenic | 50.0% | |
AGAAGCAGCTGTCATTACGG+AGG | + | chr7.4:49083554-49083573 | None:intergenic | 50.0% | |
AGAGAGAGAGAGAGAGAGAG+AGG | + | chr7.4:49082121-49082140 | None:intergenic | 50.0% | |
AGCCTTTCTCTTGAGGAGCA+AGG | + | chr7.4:49082775-49082794 | None:intergenic | 50.0% | |
ATCTACCACTGCTCGTGTTC+CGG | - | chr7.4:49085927-49085946 | MS.gene84431:CDS | 50.0% | |
ATGGAAGGCCACTCAGTTTC+AGG | - | chr7.4:49085596-49085615 | MS.gene84431:CDS | 50.0% | |
CAAACCTCCGAACATTGGTC+TGG | - | chr7.4:49082360-49082379 | MS.gene84431:intron | 50.0% | |
CCACTCAGTTTCAGGGATGA+GGG | - | chr7.4:49085604-49085623 | MS.gene84431:CDS | 50.0% | |
CGTGGAGACTATAACAGTCG+TGG | - | chr7.4:49085706-49085725 | MS.gene84431:intron | 50.0% | |
CTCGGTCGTCCTGAATCAAA+TGG | - | chr7.4:49082063-49082082 | MS.gene84431:CDS | 50.0% | |
GACCGAGCTTACTGACATCT+TGG | + | chr7.4:49082050-49082069 | None:intergenic | 50.0% | |
GACTGCTGAGGATGGTGATA+GGG | - | chr7.4:49083032-49083051 | MS.gene84431:intron | 50.0% | |
GATCAATGACCGTCACGTTG+TGG | - | chr7.4:49084631-49084650 | MS.gene84431:intron | 50.0% | |
GATCACATGGGAACCAATGG+TGG | - | chr7.4:49085859-49085878 | MS.gene84431:intron | 50.0% | |
GCAAGTAATTAGGTGGGGTC+TGG | + | chr7.4:49082412-49082431 | None:intergenic | 50.0% | |
GGAGTCATTGTCTTGGTCAC+TGG | - | chr7.4:49082698-49082717 | MS.gene84431:intron | 50.0% | |
GGGTACACATGAGGTATGAG+AGG | + | chr7.4:49082181-49082200 | None:intergenic | 50.0% | |
GTTACCATTCTCAGGAGAGG+CGG | + | chr7.4:49082873-49082892 | None:intergenic | 50.0% | |
TAGTGCGGAGATCCTATCTG+TGG | - | chr7.4:49082652-49082671 | MS.gene84431:intron | 50.0% | |
TATAGGAATGGCAATCGGGG+AGG | - | chr7.4:49085799-49085818 | MS.gene84431:intron | 50.0% | |
TGACTGCTGAGGATGGTGAT+AGG | - | chr7.4:49083031-49083050 | MS.gene84431:intron | 50.0% | |
TGGAAGGCCACTCAGTTTCA+GGG | - | chr7.4:49085597-49085616 | MS.gene84431:CDS | 50.0% | |
TTACCATTCTCAGGAGAGGC+GGG | + | chr7.4:49082872-49082891 | None:intergenic | 50.0% | |
TTTGGCCCTATCAAGAGTGG+CGG | - | chr7.4:49083892-49083911 | MS.gene84431:intron | 50.0% | |
! | GAGGGCATGGAAACTATGGA+AGG | - | chr7.4:49085581-49085600 | MS.gene84431:CDS | 50.0% |
! | GCAAGAGGGCATGGAAACTA+TGG | - | chr7.4:49085628-49085647 | MS.gene84431:CDS | 50.0% |
! | GGTTGCCTTTTGACAGCTGA+GGG | - | chr7.4:49083799-49083818 | MS.gene84431:intron | 50.0% |
! | TGCACAAGAGTCTTTTGGCG+GGG | - | chr7.4:49082676-49082695 | MS.gene84431:intron | 50.0% |
! | TGGTTGCCTTTTGACAGCTG+AGG | - | chr7.4:49083798-49083817 | MS.gene84431:intron | 50.0% |
! | TGTGGGGTTCATTGGTTGCT+TGG | - | chr7.4:49085285-49085304 | MS.gene84431:intron | 50.0% |
!! | GGAGGTTTTTCTAGTCGTGG+TGG | - | chr7.4:49085817-49085836 | MS.gene84431:intron | 50.0% |
!! | TTTTCTAGTCGTGGTGGCGA+TGG | - | chr7.4:49085823-49085842 | MS.gene84431:intron | 50.0% |
AATGGCCGTGGCGACTACAA+TGG | - | chr7.4:49085682-49085701 | MS.gene84431:intron | 55.0% | |
ACCCCCCAGTACGATTCATG+CGG | + | chr7.4:49085885-49085904 | None:intergenic | 55.0% | |
ACGATTCATGCGGCCACCAT+TGG | + | chr7.4:49085875-49085894 | None:intergenic | 55.0% | |
ACTTGTGTCTCCAGCACAGG+AGG | + | chr7.4:49082994-49083013 | None:intergenic | 55.0% | |
AGAGTGGCGGTGTCCAAGTT+AGG | - | chr7.4:49083905-49083924 | MS.gene84431:intron | 55.0% | |
AGGGCATGTGTAGCAGTTCC+AGG | + | chr7.4:49083850-49083869 | None:intergenic | 55.0% | |
CACGGCCATTGTAGTCTCCA+CGG | + | chr7.4:49085672-49085691 | None:intergenic | 55.0% | |
CAGACGATCGCACACAGAAC+AGG | + | chr7.4:49084510-49084529 | None:intergenic | 55.0% | |
CCCTCATCCCTGAAACTGAG+TGG | + | chr7.4:49085607-49085626 | None:intergenic | 55.0% | |
CGTGGAGACTATAATGGCCG+CGG | - | chr7.4:49085724-49085743 | MS.gene84431:intron | 55.0% | |
GCAGCTGTCATTACGGAGGA+CGG | + | chr7.4:49083550-49083569 | None:intergenic | 55.0% | |
GCCACTCAGTTTCAGGGATG+AGG | - | chr7.4:49085603-49085622 | MS.gene84431:CDS | 55.0% | |
GGAACTTGTGTCTCCAGCAC+AGG | + | chr7.4:49082997-49083016 | None:intergenic | 55.0% | |
GGACACCGCCACTCTTGATA+GGG | + | chr7.4:49083900-49083919 | None:intergenic | 55.0% | |
GTGGCCGCATGAATCGTACT+GGG | - | chr7.4:49085878-49085897 | MS.gene84431:intron | 55.0% | |
TCAGGCACACTGGATGGTGA+AGG | + | chr7.4:49083622-49083641 | None:intergenic | 55.0% | |
TCAGGGATGAGGGAGCAAGA+GGG | - | chr7.4:49085614-49085633 | MS.gene84431:CDS | 55.0% | |
TCAGGTTATGGCAGAGGGCA+TGG | - | chr7.4:49085568-49085587 | MS.gene84431:CDS | 55.0% | |
TGACCGTCACGTTGTGGTAG+AGG | - | chr7.4:49084637-49084656 | MS.gene84431:intron | 55.0% | |
TGCTGCGCTAAGTGCAATCG+AGG | - | chr7.4:49084065-49084084 | MS.gene84431:CDS | 55.0% | |
TGGACACCGCCACTCTTGAT+AGG | + | chr7.4:49083901-49083920 | None:intergenic | 55.0% | |
TGGCCGCATGAATCGTACTG+GGG | - | chr7.4:49085879-49085898 | MS.gene84431:intron | 55.0% | |
TTCAGGGATGAGGGAGCAAG+AGG | - | chr7.4:49085613-49085632 | MS.gene84431:CDS | 55.0% | |
! | AGTGTTGGATCCTCCTGTGC+TGG | - | chr7.4:49082981-49083000 | MS.gene84431:intron | 55.0% |
! | GCACAAGAGTCTTTTGGCGG+GGG | - | chr7.4:49082677-49082696 | MS.gene84431:intron | 55.0% |
! | GGCAGAGGGCATGGAAACTA+TGG | - | chr7.4:49085577-49085596 | MS.gene84431:CDS | 55.0% |
!! | CATACAACATCAGGTGCCGG+AGG | + | chr7.4:49081693-49081712 | None:intergenic | 55.0% |
!! | CGGGGAGGTTTTTCTAGTCG+TGG | - | chr7.4:49085814-49085833 | MS.gene84431:intron | 55.0% |
AGAGGAAGCTCCGGTTCCTG+AGG | - | chr7.4:49083104-49083123 | MS.gene84431:intron | 60.0% | |
CACGGCCATTGTAGTCGCCA+CGG | + | chr7.4:49085690-49085709 | None:intergenic | 60.0% | |
CGTGGAGACTACAATGGCCG+TGG | - | chr7.4:49085670-49085689 | MS.gene84431:intron | 60.0% | |
GATGAGGGAGCAAGAGGGCA+TGG | - | chr7.4:49085619-49085638 | MS.gene84431:CDS | 60.0% | |
GCCGCATGAATCGTACTGGG+GGG | - | chr7.4:49085881-49085900 | MS.gene84431:intron | 60.0% | |
GGCCGCATGAATCGTACTGG+GGG | - | chr7.4:49085880-49085899 | MS.gene84431:intron | 60.0% | |
GGTGGCCGCATGAATCGTAC+TGG | - | chr7.4:49085877-49085896 | MS.gene84431:intron | 60.0% | |
GTGTTCCGGCCTCTGCTTGA+TGG | - | chr7.4:49085941-49085960 | MS.gene84431:CDS | 60.0% | |
TCTCCCGCCTCTCCTGAGAA+TGG | - | chr7.4:49082866-49082885 | MS.gene84431:intron | 60.0% | |
TGGCGGGGGAGTCATTGTCT+TGG | - | chr7.4:49082691-49082710 | MS.gene84431:intron | 60.0% | |
AGAGGCCGGAACACGAGCAG+TGG | + | chr7.4:49085935-49085954 | None:intergenic | 65.0% | |
CGTGGCGACTACAATGGCCG+TGG | - | chr7.4:49085688-49085707 | MS.gene84431:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 49081666 | 49085960 | 49081666 | ID=MS.gene84431 |
chr7.4 | mRNA | 49081666 | 49085960 | 49081666 | ID=MS.gene84431.t1;Parent=MS.gene84431 |
chr7.4 | exon | 49085919 | 49085960 | 49085919 | ID=MS.gene84431.t1.exon1;Parent=MS.gene84431.t1 |
chr7.4 | CDS | 49085919 | 49085960 | 49085919 | ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1 |
chr7.4 | exon | 49085513 | 49085650 | 49085513 | ID=MS.gene84431.t1.exon2;Parent=MS.gene84431.t1 |
chr7.4 | CDS | 49085513 | 49085650 | 49085513 | ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1 |
chr7.4 | exon | 49084739 | 49085015 | 49084739 | ID=MS.gene84431.t1.exon3;Parent=MS.gene84431.t1 |
chr7.4 | CDS | 49084739 | 49085015 | 49084739 | ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1 |
chr7.4 | exon | 49084330 | 49084643 | 49084330 | ID=MS.gene84431.t1.exon4;Parent=MS.gene84431.t1 |
chr7.4 | CDS | 49084330 | 49084643 | 49084330 | ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1 |
chr7.4 | exon | 49083929 | 49084106 | 49083929 | ID=MS.gene84431.t1.exon5;Parent=MS.gene84431.t1 |
chr7.4 | CDS | 49083929 | 49084106 | 49083929 | ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1 |
chr7.4 | exon | 49083690 | 49083811 | 49083690 | ID=MS.gene84431.t1.exon6;Parent=MS.gene84431.t1 |
chr7.4 | CDS | 49083690 | 49083811 | 49083690 | ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1 |
chr7.4 | exon | 49083540 | 49083599 | 49083540 | ID=MS.gene84431.t1.exon7;Parent=MS.gene84431.t1 |
chr7.4 | CDS | 49083540 | 49083599 | 49083540 | ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1 |
chr7.4 | exon | 49081666 | 49082082 | 49081666 | ID=MS.gene84431.t1.exon8;Parent=MS.gene84431.t1 |
chr7.4 | CDS | 49081666 | 49082082 | 49081666 | ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1 |
Gene Sequence |
Protein sequence |