AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene84431


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84431.t1 MTR_7g055610 89.734 526 29 3 1 515 8 519 0.0 912
MS.gene84431.t1 MTR_7g057520 89.734 526 29 3 1 515 1 512 0.0 912
MS.gene84431.t1 MTR_4g109640 41.000 400 171 11 10 385 12 370 1.35e-75 243
MS.gene84431.t1 MTR_4g109640 40.769 390 182 10 10 383 12 368 1.06e-74 243
MS.gene84431.t1 MTR_7g013840 40.000 400 178 9 10 383 12 375 4.16e-74 242
MS.gene84431.t1 MTR_4g109640 41.146 384 177 10 10 377 12 362 5.68e-74 239
MS.gene84431.t1 MTR_7g013840 39.900 401 178 9 10 383 12 376 6.18e-74 242
MS.gene84431.t1 MTR_4g083150 35.842 505 233 16 1 460 1 459 2.20e-72 238
MS.gene84431.t1 MTR_7g098440 31.522 460 258 17 15 439 13 450 8.20e-40 150
MS.gene84431.t1 MTR_1g045800 28.495 372 219 10 8 358 7 352 1.68e-32 129
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84431.t1 AT3G25150 42.490 506 247 10 7 505 8 476 3.72e-103 318
MS.gene84431.t1 AT3G25150 42.490 506 247 10 7 505 107 575 4.51e-102 318
MS.gene84431.t1 AT5G48650 37.004 454 220 15 12 435 13 430 2.39e-63 214
MS.gene84431.t1 AT5G60980 34.190 506 235 12 1 481 1 433 1.79e-60 206
MS.gene84431.t1 AT5G60980 34.190 506 235 12 1 481 1 433 1.79e-60 206
MS.gene84431.t1 AT5G60980 34.122 507 235 12 1 481 1 434 2.38e-60 206
MS.gene84431.t1 AT5G60980 34.122 507 235 12 1 481 1 434 2.38e-60 206
MS.gene84431.t1 AT1G13730 31.690 426 232 11 1 414 1 379 1.33e-45 165
MS.gene84431.t1 AT1G13730 31.690 426 232 11 1 414 1 379 1.33e-45 165
MS.gene84431.t1 AT2G03640 30.800 500 249 18 3 487 2 419 2.56e-43 159
MS.gene84431.t1 AT1G69250 33.333 384 206 14 1 377 1 341 3.95e-42 156
MS.gene84431.t1 AT2G03640 30.938 501 246 19 3 487 2 418 5.43e-42 155
MS.gene84431.t1 AT2G03640 30.938 501 246 19 3 487 2 418 5.43e-42 155
MS.gene84431.t1 AT2G03640 30.938 501 246 19 3 487 2 418 5.43e-42 155
MS.gene84431.t1 AT2G03640 33.333 372 192 13 3 367 2 324 1.41e-40 152
MS.gene84431.t1 AT1G69250 32.468 385 207 14 1 382 1 335 1.10e-38 145
MS.gene84431.t1 AT3G07250 30.221 407 198 16 10 395 3 344 2.38e-29 122
MS.gene84431.t1 AT5G43960 28.289 456 258 15 15 443 11 424 1.86e-22 100
MS.gene84431.t1 AT5G43960 28.297 364 196 12 106 443 41 365 6.99e-15 77.0

Find 148 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGAAGGCCACTCAGTTTC+AGG 0.164891 7.4:-49082008 MS.gene84431:CDS
TCTTCGGCACTTCTTCAATT+TGG 0.175338 7.4:+49084347 None:intergenic
AATAGCCGTTCAGACTTTAA+TGG 0.204493 7.4:-49081850 MS.gene84431:CDS
GAAGTCTACAATCCAGAAAA+TGG 0.212664 7.4:-49084541 MS.gene84431:CDS
ATACTAGAACCATTTGTTTC+AGG 0.227152 7.4:+49083967 None:intergenic
CTTCGGCACTTCTTCAATTT+GGG 0.237490 7.4:+49084348 None:intergenic
GGAGTCATTGTCTTGGTCAC+TGG 0.284606 7.4:-49084906 MS.gene84431:CDS
GAGAATATGTTCAAGAAGTT+TGG 0.285207 7.4:-49083730 MS.gene84431:CDS
TTTAATGGAAGAGGGGAATA+TGG 0.309866 7.4:-49081835 MS.gene84431:CDS
ATCTACCACTGCTCGTGTTC+CGG 0.316044 7.4:-49081677 MS.gene84431:CDS
GGCAGAGGGCATGGAAACTA+TGG 0.318726 7.4:-49082027 MS.gene84431:CDS
ACACGAGCAGTGGTAGATTT+AGG 0.324177 7.4:+49081682 None:intergenic
GAGTCATTGTCTTGGTCACT+GGG 0.328550 7.4:-49084905 MS.gene84431:CDS
TATGGAAATAGCCGAAGTTT+TGG 0.332929 7.4:-49081958 MS.gene84431:CDS
TGGACACCGCCACTCTTGAT+AGG 0.341350 7.4:+49083706 None:intergenic
CCGATGATACCATTTGATTC+AGG 0.342113 7.4:+49085532 None:intergenic
GCAAGAGGGCATGGAAACTA+TGG 0.365956 7.4:-49081976 MS.gene84431:CDS
GTGGATGCACAAGAGTCTTT+TGG 0.375158 7.4:-49084933 MS.gene84431:CDS
GCTGCTTTCTGTGAATCATT+AGG 0.376741 7.4:+49084463 None:intergenic
TACACAGAAGGTAGCTGAAT+TGG 0.396416 7.4:-49084374 MS.gene84431:CDS
TACACAGAAGGTAGCTGAAT+TGG 0.396416 7.4:-49084416 MS.gene84431:CDS
GGGAATATGGATATGGATAT+AGG 0.400347 7.4:-49081822 MS.gene84431:CDS
ATACCTTTGCTGTCCTAACT+TGG 0.400943 7.4:+49083686 None:intergenic
GGAAGAGGGGAATATGGATA+TGG 0.401045 7.4:-49081829 MS.gene84431:CDS
AGGGCATGTGTAGCAGTTCC+AGG 0.407057 7.4:+49083757 None:intergenic
TGGATATAGGAATGGCAATC+GGG 0.426348 7.4:-49081809 MS.gene84431:CDS
ATGGATATAGGAATGGCAAT+CGG 0.428631 7.4:-49081810 MS.gene84431:CDS
CACAGAAGCAGCTGTCATTA+CGG 0.429670 7.4:+49084050 None:intergenic
TAAAACCTATGTACATGCTC+AGG 0.431896 7.4:+49085580 None:intergenic
AGCATCATGTTACCATTCTC+AGG 0.433770 7.4:+49084726 None:intergenic
TTCCTTGCTCCTCAAGAGAA+AGG 0.437287 7.4:-49084834 MS.gene84431:CDS
TGACTGCTGAGGATGGTGAT+AGG 0.438498 7.4:-49084573 MS.gene84431:CDS
AGTGTTGGATCCTCCTGTGC+TGG 0.440145 7.4:-49084623 MS.gene84431:CDS
AGAGTGGCGGTGTCCAAGTT+AGG 0.440879 7.4:-49083699 MS.gene84431:CDS
TTGGTCACTGGGTTTATGAT+AGG 0.445866 7.4:-49084894 MS.gene84431:CDS
GACCGAGCTTACTGACATCT+TGG 0.456560 7.4:+49085557 None:intergenic
GGTGGCCGCATGAATCGTAC+TGG 0.460325 7.4:-49081727 MS.gene84431:CDS
AACAGTCGTGGAGACTATAA+TGG 0.461729 7.4:-49081886 MS.gene84431:CDS
CGTTCAGACTTTAATGGAAG+AGG 0.468224 7.4:-49081844 MS.gene84431:CDS
ATGGAGGCATATGATTTCTT+CGG 0.469501 7.4:+49084331 None:intergenic
GCCACTCAGTTTCAGGGATG+AGG 0.470258 7.4:-49082001 MS.gene84431:CDS
ATTTATTTGAGAGGGCTGCC+TGG 0.473653 7.4:-49083775 MS.gene84431:CDS
TCAACAAGAACCTCAGGAAC+CGG 0.474002 7.4:+49084490 None:intergenic
ACTCTTGTGCATCCACAGAT+AGG 0.475539 7.4:+49084940 None:intergenic
TTCTGTTCAGGTTATGGCAG+AGG 0.481492 7.4:-49082042 MS.gene84431:CDS
AAGTCTACAATCCAGAAAAT+GGG 0.483272 7.4:-49084540 MS.gene84431:CDS
TGTTGATGAAAATGAAATCA+AGG 0.484974 7.4:-49084781 MS.gene84431:CDS
TGACAAGAAGATACTGTCAA+TGG 0.484996 7.4:-49084988 MS.gene84431:CDS
GATGAGGGAGCAAGAGGGCA+TGG 0.486475 7.4:-49081985 MS.gene84431:CDS
GTTTATCAGGGATTTCACTT+TGG 0.487116 7.4:-49083586 MS.gene84431:intron
GGAGATCCAATGTCATGATC+AGG 0.490484 7.4:+49084756 None:intergenic
ACAAAGTAGCCTTTCTCTTG+AGG 0.490719 7.4:+49084825 None:intergenic
ACGATTCATGCGGCCACCAT+TGG 0.494198 7.4:+49081732 None:intergenic
GCTACCTTCTGTGTATCATC+AGG 0.507667 7.4:+49084382 None:intergenic
GCTACCTTCTGTGTATCATC+AGG 0.507667 7.4:+49084424 None:intergenic
GGAACTTGTGTCTCCAGCAC+AGG 0.507872 7.4:+49084610 None:intergenic
ATAGATATACATACAACATC+AGG 0.509761 7.4:+49085905 None:intergenic
GTGGCCGCATGAATCGTACT+GGG 0.512111 7.4:-49081726 MS.gene84431:CDS
GCAGTCACAGATATTTGCTC+TGG 0.513035 7.4:+49084589 None:intergenic
TGGAAGGCCACTCAGTTTCA+GGG 0.515875 7.4:-49082007 MS.gene84431:CDS
GGAATTTCAACAAGAACCTC+AGG 0.516382 7.4:+49084484 None:intergenic
CTCGGTCGTCCTGAATCAAA+TGG 0.516738 7.4:-49085541 MS.gene84431:CDS
TCAGGTTATGGCAGAGGGCA+TGG 0.518859 7.4:-49082036 MS.gene84431:CDS
TCCAGTGTGCCTGAAACAAA+TGG 0.519573 7.4:-49083976 MS.gene84431:CDS
TACCAAGATGTCAGTAAGCT+CGG 0.526213 7.4:-49085559 MS.gene84431:CDS
TTCAGAGAATCAAGTTCCTC+CGG 0.526348 7.4:-49085930 MS.gene84431:CDS
GCTATTCAATTTATTTGAGA+GGG 0.527276 7.4:-49083783 MS.gene84431:CDS
AATGATTCACAGAAAGCAGC+TGG 0.531023 7.4:-49084460 MS.gene84431:CDS
GGCTATTCAATTTATTTGAG+AGG 0.531523 7.4:-49083784 MS.gene84431:CDS
GACAAGAAGATACTGTCAAT+GGG 0.533669 7.4:-49084987 MS.gene84431:CDS
ACCATTTGTTTCAGGCACAC+TGG 0.537368 7.4:+49083975 None:intergenic
GTTCAGACTTTAATGGAAGA+GGG 0.540785 7.4:-49081843 MS.gene84431:CDS
TCTCCCGCCTCTCCTGAGAA+TGG 0.543122 7.4:-49084738 MS.gene84431:intron
CGTGTTCCGGCCTCTGCTTG+AGG 0.544497 7.4:-49081664 None:intergenic
TCTGTTCAGGTTATGGCAGA+GGG 0.545340 7.4:-49082041 MS.gene84431:CDS
TTACCATTCTCAGGAGAGGC+GGG 0.546248 7.4:+49084735 None:intergenic
GTAGCTTAAGGTAATGAAAG+AGG 0.550794 7.4:-49084088 MS.gene84431:intron
CCTGAATCAAATGGTATCAT+CGG 0.550987 7.4:-49085532 MS.gene84431:CDS
GGATATAGGAATGGCAATCG+GGG 0.554183 7.4:-49081808 MS.gene84431:CDS
TCTAGTATAAGTACTAATGA+AGG 0.557933 7.4:-49083952 MS.gene84431:CDS
AAGGAACCTGATCATGACAT+TGG 0.558690 7.4:-49084762 MS.gene84431:CDS
AGAGGCCGGAACACGAGCAG+TGG 0.559072 7.4:+49081672 None:intergenic
TAGCTTCCTCAAGCAGAGGC+CGG 0.560957 7.4:+49081658 None:intergenic
TGTTGAAGAAGAGGAAGCTC+CGG 0.562145 7.4:-49084509 MS.gene84431:CDS
AGTCTCCACGGCCAAAACTT+CGG 0.562377 7.4:+49081947 None:intergenic
TTCAGGGATGAGGGAGCAAG+AGG 0.562453 7.4:-49081991 MS.gene84431:CDS
CCACTCAGTTTCAGGGATGA+GGG 0.563881 7.4:-49082000 MS.gene84431:CDS
GACTGCTGAGGATGGTGATA+GGG 0.564877 7.4:-49084572 MS.gene84431:CDS
AGTATAAGTACTAATGAAGG+TGG 0.568379 7.4:-49083949 MS.gene84431:CDS
CGTGGAGACTACAATGGCCG+TGG 0.570491 7.4:-49081934 MS.gene84431:CDS
CTCTTCCATTAAAGTCTGAA+CGG 0.573202 7.4:+49081845 None:intergenic
GGCCGCATGAATCGTACTGG+GGG 0.574140 7.4:-49081724 MS.gene84431:CDS
TTTGTTTCAGGCACACTGGA+TGG 0.574807 7.4:+49083979 None:intergenic
TATGGATATGGATATAGGAA+TGG 0.575183 7.4:-49081817 MS.gene84431:CDS
AGCCTTTCTCTTGAGGAGCA+AGG 0.578397 7.4:+49084832 None:intergenic
GGACACCGCCACTCTTGATA+GGG 0.579408 7.4:+49083707 None:intergenic
GCAAGTGTCTGTTGAAGAAG+AGG 0.582143 7.4:-49084518 MS.gene84431:CDS
TCTGTGTATCATCAGGAACA+TGG 0.586493 7.4:+49084389 None:intergenic
AATGATCACATGGGAACCAA+TGG 0.597486 7.4:-49081748 MS.gene84431:CDS
GATCACATGGGAACCAATGG+TGG 0.598618 7.4:-49081745 MS.gene84431:CDS
AAAACCTATGTACATGCTCA+GGG 0.600667 7.4:+49085581 None:intergenic
TGGCCGCATGAATCGTACTG+GGG 0.600883 7.4:-49081725 MS.gene84431:CDS
CGTGGAGACTATAATGGCCG+CGG 0.602209 7.4:-49081880 MS.gene84431:CDS
AATGGCCGTGGCGACTACAA+TGG 0.603350 7.4:-49081922 MS.gene84431:CDS
ACTTGTGTCTCCAGCACAGG+AGG 0.604167 7.4:+49084613 None:intergenic
TCTTGAACATATTCTCAACA+AGG 0.606195 7.4:+49083737 None:intergenic
GCAGCTGTCATTACGGAGGA+CGG 0.611765 7.4:+49084057 None:intergenic
CCCTCATCCCTGAAACTGAG+TGG 0.612765 7.4:+49082000 None:intergenic
GTTACCATTCTCAGGAGAGG+CGG 0.614483 7.4:+49084734 None:intergenic
CGTGGCGACTACAATGGCCG+TGG 0.614859 7.4:-49081916 MS.gene84431:CDS
CTGTGTATCATCAGGAACAT+GGG 0.614865 7.4:+49084390 None:intergenic
CACGACTGTTATAGTCTCCA+CGG 0.614892 7.4:+49081899 None:intergenic
ATACATACAACATCAGGTGC+CGG 0.615319 7.4:+49085911 None:intergenic
GCAAATATCTGTGACTGCTG+AGG 0.616027 7.4:-49084584 MS.gene84431:CDS
CACGGCCATTGTAGTCGCCA+CGG 0.619653 7.4:+49081917 None:intergenic
CACGGCCATTGTAGTCTCCA+CGG 0.619653 7.4:+49081935 None:intergenic
CACTGGGTTTATGATAGGAA+AGG 0.619962 7.4:-49084889 MS.gene84431:CDS
TGCTGCGCTAAGTGCAATCG+AGG 0.621802 7.4:-49083539 MS.gene84431:intron
AAAGCCCTGAGCATGTACAT+AGG 0.622181 7.4:-49085585 MS.gene84431:CDS
ATATCTGTGACTGCTGAGGA+TGG 0.626749 7.4:-49084580 MS.gene84431:CDS
AGAGGAAGCTCCGGTTCCTG+AGG 0.635440 7.4:-49084500 MS.gene84431:CDS
TTCAGACTTTAATGGAAGAG+GGG 0.635546 7.4:-49081842 MS.gene84431:CDS
TAGTGCGGAGATCCTATCTG+TGG 0.636226 7.4:-49084952 MS.gene84431:CDS
GGAAACAATCAAGAAACTGA+AGG 0.637783 7.4:-49083928 MS.gene84431:intron
TGTTCCTGATGATACACAGA+AGG 0.641677 7.4:-49084386 MS.gene84431:CDS
TGTTCCTGATGATACACAGA+AGG 0.641677 7.4:-49084428 MS.gene84431:CDS
GGAAGAGACTCTTACAATGG+AGG 0.644795 7.4:+49084315 None:intergenic
CATCGGCATCACAACTACAA+TGG 0.647447 7.4:-49085515 MS.gene84431:CDS
CATGTTACCATTCTCAGGAG+AGG 0.648742 7.4:+49084731 None:intergenic
GGGTTATAGTGAACTTAGTG+CGG 0.649351 7.4:-49084967 MS.gene84431:CDS
TCAGGGATGAGGGAGCAAGA+GGG 0.650471 7.4:-49081990 MS.gene84431:CDS
AAGTTTGGCCCTATCAAGAG+TGG 0.651104 7.4:-49083715 MS.gene84431:CDS
TATAGGAATGGCAATCGGGG+AGG 0.652840 7.4:-49081805 MS.gene84431:CDS
CTTGAACATATTCTCAACAA+GGG 0.657058 7.4:+49083738 None:intergenic
TTTGGCCGTGGAGACTACAA+TGG 0.657644 7.4:-49081940 MS.gene84431:CDS
GAGGGCATGGAAACTATGGA+AGG 0.657762 7.4:-49082023 MS.gene84431:CDS
CGTGGAGACTATAACAGTCG+TGG 0.663202 7.4:-49081898 MS.gene84431:CDS
ATATCAGAGAAATGATCACA+TGG 0.669840 7.4:-49081758 MS.gene84431:CDS
TGTATAGCTTCCTCAAGCAG+AGG 0.677594 7.4:+49081654 None:intergenic
TGTCCAAGTTAGGACAGCAA+AGG 0.677658 7.4:-49083689 MS.gene84431:intron
TCAGGCACACTGGATGGTGA+AGG 0.681317 7.4:+49083985 None:intergenic
ATAGTAGTACTGTTCAACAA+AGG 0.683995 7.4:+49085618 None:intergenic
TTTGGCCCTATCAAGAGTGG+CGG 0.685024 7.4:-49083712 MS.gene84431:CDS
GCCGCATGAATCGTACTGGG+GGG 0.690258 7.4:-49081723 MS.gene84431:CDS
TATCAGAGAAATGATCACAT+GGG 0.696631 7.4:-49081757 MS.gene84431:CDS
CATACAACATCAGGTGCCGG+AGG 0.709159 7.4:+49085914 None:intergenic
AGAAGCAGCTGTCATTACGG+AGG 0.730010 7.4:+49084053 None:intergenic
AACGGCTATTGAAGTCTCCG+CGG 0.748532 7.4:+49081863 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAAAACAAAAAAACA+GGG + chr7.4:49083958-49083977 None:intergenic 10.0%
!! TTTAAAAAAAACAAAAAAAC+AGG + chr7.4:49083959-49083978 None:intergenic 10.0%
!!! AATAAAATGTTTTTAAAACT+TGG - chr7.4:49084942-49084961 MS.gene84431:CDS 10.0%
!!! TTTATTATGTTATATTTTGT+GGG - chr7.4:49085268-49085287 MS.gene84431:intron 10.0%
!!! TTTCTTATTTTGATATTATA+CGG - chr7.4:49085355-49085374 MS.gene84431:intron 10.0%
!!! TTTTATTATGTTATATTTTG+TGG - chr7.4:49085267-49085286 MS.gene84431:intron 10.0%
!! AACTTAGATTCTAATAAATA+TGG - chr7.4:49082485-49082504 MS.gene84431:intron 15.0%
!! ACAATGGAAATAAATTTAAA+AGG + chr7.4:49082440-49082459 None:intergenic 15.0%
!! ATGATAACTATGAAATTTAT+TGG - chr7.4:49084746-49084765 MS.gene84431:CDS 15.0%
!! CATACATATACATATATATA+TGG + chr7.4:49083711-49083730 None:intergenic 15.0%
!! TGATAACTATGAAATTTATT+GGG - chr7.4:49084747-49084766 MS.gene84431:CDS 15.0%
!!! TTATTATGTTATATTTTGTG+GGG - chr7.4:49085269-49085288 MS.gene84431:intron 15.0%
!! AAAAAGAATTTAACCCTTTA+CGG + chr7.4:49084440-49084459 None:intergenic 20.0%
!! ATTATGTTATGTTGTCTTTA+AGG - chr7.4:49084414-49084433 MS.gene84431:CDS 20.0%
!! TAACATTTACAATGAAAACT+CGG + chr7.4:49083357-49083376 None:intergenic 20.0%
!! TAATATAAACCATCAAAAAG+TGG + chr7.4:49085045-49085064 None:intergenic 20.0%
!! TAGAATCTAAGTTAACAAAT+GGG + chr7.4:49082478-49082497 None:intergenic 20.0%
!! TATTTATTGATGTGTTCAAT+TGG - chr7.4:49083778-49083797 MS.gene84431:CDS 20.0%
!! TTAGAATCTAAGTTAACAAA+TGG + chr7.4:49082479-49082498 None:intergenic 20.0%
!!! AGTGTTTTTTTATTTAGTAC+TGG - chr7.4:49084684-49084703 MS.gene84431:intron 20.0%
!!! ATAACTTTTTGGCATATTAA+TGG - chr7.4:49083995-49084014 MS.gene84431:CDS 20.0%
!!! ATTTTTAATGTGATTGGTTT+AGG - chr7.4:49081954-49081973 MS.gene84431:CDS 20.0%
!!! CTTTAATTTGCATCTTTATT+TGG - chr7.4:49084567-49084586 MS.gene84431:CDS 20.0%
!!! GTTTTAAAAAGGATACAAAA+TGG - chr7.4:49085134-49085153 MS.gene84431:intron 20.0%
!!! TAACTTTTTGGCATATTAAT+GGG - chr7.4:49083996-49084015 MS.gene84431:CDS 20.0%
!!! TTGCTTTTTTATTTGGTTTT+TGG - chr7.4:49084483-49084502 MS.gene84431:CDS 20.0%
! AAAAGTTATCACAACAAAGT+TGG + chr7.4:49085250-49085269 None:intergenic 25.0%
! AAACAATAATAAGAAGTCCT+TGG + chr7.4:49085403-49085422 None:intergenic 25.0%
! AAGATATTGTACAAACCAAT+TGG + chr7.4:49082255-49082274 None:intergenic 25.0%
! AATAAGCAACTTAAGTTAAC+AGG + chr7.4:49082945-49082964 None:intergenic 25.0%
! AGAAATCTCTTTACAACTTA+TGG + chr7.4:49084807-49084826 None:intergenic 25.0%
! ATAGATATACATACAACATC+AGG + chr7.4:49081702-49081721 None:intergenic 25.0%
! CTACATGCAAATAAATAGAA+AGG + chr7.4:49084278-49084297 None:intergenic 25.0%
! GCTATTCAATTTATTTGAGA+GGG - chr7.4:49083821-49083840 MS.gene84431:intron 25.0%
! TCAATATTCATATCTCCAAT+TGG - chr7.4:49082237-49082256 MS.gene84431:intron 25.0%
! TCTAGTATAAGTACTAATGA+AGG - chr7.4:49083652-49083671 MS.gene84431:intron 25.0%
! TTGTACAAAATAGTGTTTAG+CGG - chr7.4:49081839-49081858 MS.gene84431:CDS 25.0%
!! AATACTTTTATCTGCATTTC+AGG - chr7.4:49084595-49084614 MS.gene84431:CDS 25.0%
!! TGTTGATGAAAATGAAATCA+AGG - chr7.4:49082823-49082842 MS.gene84431:intron 25.0%
!! TTATTATTTTCCTCTGTAAC+TGG - chr7.4:49083483-49083502 MS.gene84431:intron 25.0%
!!! CTCTGAAATAATTTCTTTCT+GGG + chr7.4:49085452-49085471 None:intergenic 25.0%
!!! TAATATGCTTTTTTGTAGCT+GGG + chr7.4:49085193-49085212 None:intergenic 25.0%
!!! TGACTGATTTTTAATGTGAT+TGG - chr7.4:49081948-49081967 MS.gene84431:CDS 25.0%
AAACAATTACACCAATGCAT+AGG + chr7.4:49082336-49082355 None:intergenic 30.0%
AAAGGAAAAGAGGGAATTTA+TGG + chr7.4:49083313-49083332 None:intergenic 30.0%
AAATCCTTGTACACTATTGA+GGG - chr7.4:49085112-49085131 MS.gene84431:intron 30.0%
AAATTTATTGGGTTCGTGTA+TGG - chr7.4:49084758-49084777 MS.gene84431:CDS 30.0%
AAGTCTACAATCCAGAAAAT+GGG - chr7.4:49083064-49083083 MS.gene84431:intron 30.0%
AATATCACTATGATAAACGC+AGG + chr7.4:49083762-49083781 None:intergenic 30.0%
AATCGCTATTTGACAACATT+GGG - chr7.4:49081887-49081906 MS.gene84431:CDS 30.0%
AATTTCACTGTAGAACAAGA+TGG + chr7.4:49084189-49084208 None:intergenic 30.0%
AGTATAAGTACTAATGAAGG+TGG - chr7.4:49083655-49083674 MS.gene84431:intron 30.0%
ATACTAGAACCATTTGTTTC+AGG + chr7.4:49083640-49083659 None:intergenic 30.0%
ATAGTAGTACTGTTCAACAA+AGG + chr7.4:49081989-49082008 None:intergenic 30.0%
ATATCACTATGATAAACGCA+GGG + chr7.4:49083761-49083780 None:intergenic 30.0%
ATATCAGAGAAATGATCACA+TGG - chr7.4:49085846-49085865 MS.gene84431:intron 30.0%
CACCATTTCTCATAATTACA+GGG - chr7.4:49084885-49084904 MS.gene84431:CDS 30.0%
CATTACCTTCAATAAATTGC+TGG - chr7.4:49084861-49084880 MS.gene84431:CDS 30.0%
CCAGAAAGAAATTATTTCAG+AGG - chr7.4:49085450-49085469 MS.gene84431:intron 30.0%
CTTGAACATATTCTCAACAA+GGG + chr7.4:49083869-49083888 None:intergenic 30.0%
CTTTATAGCTGTCTATGTAT+TGG - chr7.4:49082151-49082170 MS.gene84431:intron 30.0%
GAGAATATGTTCAAGAAGTT+TGG - chr7.4:49083874-49083893 MS.gene84431:intron 30.0%
GGCTATTCAATTTATTTGAG+AGG - chr7.4:49083820-49083839 MS.gene84431:intron 30.0%
GTTAACAAATGGGAATTTAG+AGG + chr7.4:49082468-49082487 None:intergenic 30.0%
TAAATCCTTGTACACTATTG+AGG - chr7.4:49085111-49085130 MS.gene84431:intron 30.0%
TAACCATGTTGTAATACTCT+TGG - chr7.4:49082289-49082308 MS.gene84431:intron 30.0%
TAATCGCTATTTGACAACAT+TGG - chr7.4:49081886-49081905 MS.gene84431:CDS 30.0%
TACACTAGTTGTTGAACAAA+AGG + chr7.4:49084993-49085012 None:intergenic 30.0%
TACCCTGTAATTATGAGAAA+TGG + chr7.4:49084890-49084909 None:intergenic 30.0%
TAGTTATCATGTGCAGAAAT+AGG + chr7.4:49084736-49084755 None:intergenic 30.0%
TATCAACTCCATAATGTCTT+TGG + chr7.4:49084917-49084936 None:intergenic 30.0%
TATCAGAGAAATGATCACAT+GGG - chr7.4:49085847-49085866 MS.gene84431:intron 30.0%
TATGGATATGGATATAGGAA+TGG - chr7.4:49085787-49085806 MS.gene84431:intron 30.0%
TATTCTTGACTCTATTACAC+TGG - chr7.4:49083384-49083403 MS.gene84431:intron 30.0%
TCTTGAACATATTCTCAACA+AGG + chr7.4:49083870-49083889 None:intergenic 30.0%
TTTCAAATCCTTGTACACTA+TGG - chr7.4:49085081-49085100 MS.gene84431:intron 30.0%
! AAACTTTTGGCATACAACTA+GGG - chr7.4:49085485-49085504 MS.gene84431:intron 30.0%
! TACTGGTTAATTTCACATCA+AGG - chr7.4:49084701-49084720 MS.gene84431:intron 30.0%
! TTATATTTTGTGGGGTTCAT+TGG - chr7.4:49085277-49085296 MS.gene84431:intron 30.0%
! TTTTCAAATAACGCCTATAG+CGG + chr7.4:49081815-49081834 None:intergenic 30.0%
!! AAGTCTCAAAGGTATTGATT+TGG - chr7.4:49085019-49085038 MS.gene84431:intron 30.0%
!! CCTCTGAAATAATTTCTTTC+TGG + chr7.4:49085453-49085472 None:intergenic 30.0%
!! GCATATTAATGGGTTTATCA+GGG - chr7.4:49084006-49084025 MS.gene84431:CDS 30.0%
!! TTAATGTGATTGGTTTAGGT+TGG - chr7.4:49081958-49081977 MS.gene84431:CDS 30.0%
!!! CACTATTGAGGGTTTTAAAA+AGG - chr7.4:49085123-49085142 MS.gene84431:intron 30.0%
!!! CACTTCGTTGCTTTTTTATT+TGG - chr7.4:49084476-49084495 MS.gene84431:CDS 30.0%
!!! GTAATATGCTTTTTTGTAGC+TGG + chr7.4:49085194-49085213 None:intergenic 30.0%
!!! TTAAGGCGTGGTTTTATTAA+GGG - chr7.4:49082900-49082919 MS.gene84431:intron 30.0%
AAAACACTCCATAGTGTACA+AGG + chr7.4:49085092-49085111 None:intergenic 35.0%
AAAACCCTCAATAGTGTACA+AGG + chr7.4:49085119-49085138 None:intergenic 35.0%
AAAACCTATGTACATGCTCA+GGG + chr7.4:49082026-49082045 None:intergenic 35.0%
AAAATGCACACAAGAACCAA+AGG + chr7.4:49082202-49082221 None:intergenic 35.0%
AAAGAGCAAGAAAGGAAAAG+AGG + chr7.4:49083323-49083342 None:intergenic 35.0%
AAATGCACACAAGAACCAAA+GGG + chr7.4:49082201-49082220 None:intergenic 35.0%
AAGAGCAAGAAAGGAAAAGA+GGG + chr7.4:49083322-49083341 None:intergenic 35.0%
AATAGCCGTTCAGACTTTAA+TGG - chr7.4:49085754-49085773 MS.gene84431:intron 35.0%
ATGGATATAGGAATGGCAAT+CGG - chr7.4:49085794-49085813 MS.gene84431:intron 35.0%
ATTTGCATGTAGTGTTTGTG+TGG - chr7.4:49084286-49084305 MS.gene84431:intron 35.0%
CAAACACAATGAGAACTTAG+TGG + chr7.4:49084338-49084357 None:intergenic 35.0%
CACTAAGTTCTCATTGTGTT+TGG - chr7.4:49084336-49084355 MS.gene84431:CDS 35.0%
CATACAATGTTGTGAATCGT+GGG - chr7.4:49081737-49081756 MS.gene84431:CDS 35.0%
CATGTGCAGAAATAGGAATT+TGG + chr7.4:49084729-49084748 None:intergenic 35.0%
CCACCATTTCTCATAATTAC+AGG - chr7.4:49084884-49084903 MS.gene84431:CDS 35.0%
CCAGGACACATGAAAATTAA+GGG + chr7.4:49084362-49084381 None:intergenic 35.0%
CCTGAATCAAATGGTATCAT+CGG - chr7.4:49082072-49082091 MS.gene84431:intron 35.0%
CCTGTAATTATGAGAAATGG+TGG + chr7.4:49084887-49084906 None:intergenic 35.0%
CTAGTTGTATGCCAAAAGTT+TGG + chr7.4:49085486-49085505 None:intergenic 35.0%
CTCTTCCATTAAAGTCTGAA+CGG + chr7.4:49085762-49085781 None:intergenic 35.0%
GAAGTCTACAATCCAGAAAA+TGG - chr7.4:49083063-49083082 MS.gene84431:intron 35.0%
GAATGGTAACATGATGCTTA+AGG - chr7.4:49082883-49082902 MS.gene84431:intron 35.0%
GAATTTAGAGGATCGTACAA+TGG + chr7.4:49082456-49082475 None:intergenic 35.0%
GACAACATAACATAATCCAG+TGG + chr7.4:49084410-49084429 None:intergenic 35.0%
GACAAGAAGATACTGTCAAT+GGG - chr7.4:49082617-49082636 MS.gene84431:intron 35.0%
GGAAACAATCAAGAAACTGA+AGG - chr7.4:49083676-49083695 MS.gene84431:intron 35.0%
GGGAATATGGATATGGATAT+AGG - chr7.4:49085782-49085801 MS.gene84431:intron 35.0%
GTAGAGCTGAAATGTTGATA+AGG + chr7.4:49085381-49085400 None:intergenic 35.0%
GTAGCTTAAGGTAATGAAAG+AGG - chr7.4:49083516-49083535 MS.gene84431:intron 35.0%
GTTCAGACTTTAATGGAAGA+GGG - chr7.4:49085761-49085780 MS.gene84431:intron 35.0%
GTTTATCAGGGATTTCACTT+TGG - chr7.4:49084018-49084037 MS.gene84431:CDS 35.0%
GTTTCTTTCTACAAATCCAC+AGG - chr7.4:49084146-49084165 MS.gene84431:intron 35.0%
TAAAACCTATGTACATGCTC+AGG + chr7.4:49082027-49082046 None:intergenic 35.0%
TAAAGAGATTTCTCTCACAC+TGG - chr7.4:49084814-49084833 MS.gene84431:CDS 35.0%
TACATATCCAGACCAATGTT+CGG + chr7.4:49082370-49082389 None:intergenic 35.0%
TATGGAAGAGACTCTTACAA+TGG + chr7.4:49083295-49083314 None:intergenic 35.0%
TATTTCAAACCTCCGAACAT+TGG - chr7.4:49082355-49082374 MS.gene84431:intron 35.0%
TCATACAATGTTGTGAATCG+TGG - chr7.4:49081736-49081755 MS.gene84431:CDS 35.0%
TGACAAGAAGATACTGTCAA+TGG - chr7.4:49082616-49082635 MS.gene84431:intron 35.0%
TTCAGACTTTAATGGAAGAG+GGG - chr7.4:49085762-49085781 MS.gene84431:intron 35.0%
TTTAATGGAAGAGGGGAATA+TGG - chr7.4:49085769-49085788 MS.gene84431:intron 35.0%
TTTCTTATGCTTCTGAGTTG+TGG - chr7.4:49084248-49084267 MS.gene84431:intron 35.0%
! ATGGAGGCATATGATTTCTT+CGG + chr7.4:49083276-49083295 None:intergenic 35.0%
! CAAACTTTTGGCATACAACT+AGG - chr7.4:49085484-49085503 MS.gene84431:intron 35.0%
! GCTGCTAGCTAATAACTTTT+TGG - chr7.4:49083984-49084003 MS.gene84431:CDS 35.0%
! GTGTAGATTTGAAGTCTCAA+AGG - chr7.4:49085008-49085027 MS.gene84431:intron 35.0%
! TATGGATTGAGTGTTAGAAG+TGG - chr7.4:49082503-49082522 MS.gene84431:intron 35.0%
! TTATTTTCCTCTGTAACTGG+TGG - chr7.4:49083486-49083505 MS.gene84431:intron 35.0%
!! AAAGGCATCAGCAAGTAATT+AGG + chr7.4:49082422-49082441 None:intergenic 35.0%
!! CAAAACTTCTAAAATCAGCC+AGG + chr7.4:49084380-49084399 None:intergenic 35.0%
!! GGCATATTAATGGGTTTATC+AGG - chr7.4:49084005-49084024 MS.gene84431:CDS 35.0%
!! GTGCAATCGAGGTATTTTAT+TGG - chr7.4:49084076-49084095 MS.gene84431:CDS 35.0%
!! TGCATTTTCTGTTCAGGTTA+TGG - chr7.4:49085556-49085575 MS.gene84431:CDS 35.0%
!!! CTTAAGGCGTGGTTTTATTA+AGG - chr7.4:49082899-49082918 MS.gene84431:intron 35.0%
!!! GAAGTTTTGTTCATTACCAC+TGG - chr7.4:49084391-49084410 MS.gene84431:CDS 35.0%
!!! TTGATTTGGCCACTTTTTGA+TGG - chr7.4:49085033-49085052 MS.gene84431:intron 35.0%
AACAGTCGTGGAGACTATAA+TGG - chr7.4:49085718-49085737 MS.gene84431:intron 40.0%
AAGGAACCTGATCATGACAT+TGG - chr7.4:49082842-49082861 MS.gene84431:intron 40.0%
AATGATCACATGGGAACCAA+TGG - chr7.4:49085856-49085875 MS.gene84431:intron 40.0%
AATGATTCACAGAAAGCAGC+TGG - chr7.4:49083144-49083163 MS.gene84431:intron 40.0%
ACAAAGTAGCCTTTCTCTTG+AGG + chr7.4:49082782-49082801 None:intergenic 40.0%
ACACCAATGCATAGGCATAT+GGG + chr7.4:49082328-49082347 None:intergenic 40.0%
ACTGTAGAACAAGATGGCAA+AGG + chr7.4:49084183-49084202 None:intergenic 40.0%
AGCATCATGTTACCATTCTC+AGG + chr7.4:49082881-49082900 None:intergenic 40.0%
ATACATACAACATCAGGTGC+CGG + chr7.4:49081696-49081715 None:intergenic 40.0%
CAACTCCATAATGTCTTTGG+AGG + chr7.4:49084914-49084933 None:intergenic 40.0%
CAACTTATGGCATGCAAACA+AGG + chr7.4:49084794-49084813 None:intergenic 40.0%
CAATCAAGAAACTGAAGGTC+TGG - chr7.4:49083681-49083700 MS.gene84431:intron 40.0%
CACTGGGTTTATGATAGGAA+AGG - chr7.4:49082715-49082734 MS.gene84431:intron 40.0%
CATCAGCAAGTAATTAGGTG+GGG + chr7.4:49082417-49082436 None:intergenic 40.0%
CCGATGATACCATTTGATTC+AGG + chr7.4:49082075-49082094 None:intergenic 40.0%
CCTATTTCATTTCACCAAGC+AGG - chr7.4:49082589-49082608 MS.gene84431:intron 40.0%
CGTTCAGACTTTAATGGAAG+AGG - chr7.4:49085760-49085779 MS.gene84431:intron 40.0%
CTGTGTATCATCAGGAACAT+GGG + chr7.4:49083175-49083194 None:intergenic 40.0%
CTTCGGCACTTCTTCAATTT+GGG + chr7.4:49083259-49083278 None:intergenic 40.0%
CTTCTTGTCAATTTCCTGCT+TGG + chr7.4:49082606-49082625 None:intergenic 40.0%
GAAAAGAGGTCAACTAATCG+AGG - chr7.4:49084659-49084678 MS.gene84431:intron 40.0%
GAGTCTAGAAAGAGCAAGAA+AGG + chr7.4:49083331-49083350 None:intergenic 40.0%
GCATCAGCAAGTAATTAGGT+GGG + chr7.4:49082418-49082437 None:intergenic 40.0%
GCCAGGACACATGAAAATTA+AGG + chr7.4:49084363-49084382 None:intergenic 40.0%
GGAATTTCAACAAGAACCTC+AGG + chr7.4:49083123-49083142 None:intergenic 40.0%
GGGTTATAGTGAACTTAGTG+CGG - chr7.4:49082637-49082656 MS.gene84431:intron 40.0%
TACACAGAAGGTAGCTGAAT+TGG - chr7.4:49083188-49083207 MS.gene84431:intron 40.0%
TACACCAATGCATAGGCATA+TGG + chr7.4:49082329-49082348 None:intergenic 40.0%
TACCAAGATGTCAGTAAGCT+CGG - chr7.4:49082045-49082064 MS.gene84431:CDS 40.0%
TAGTGCTATAGTTCCGCTAT+AGG - chr7.4:49081799-49081818 MS.gene84431:CDS 40.0%
TCAACATTTCAGCTCTACCA+AGG - chr7.4:49085383-49085402 MS.gene84431:intron 40.0%
TCTGTGTATCATCAGGAACA+TGG + chr7.4:49083176-49083195 None:intergenic 40.0%
TCTTCGGCACTTCTTCAATT+TGG + chr7.4:49083260-49083279 None:intergenic 40.0%
TGACGGTCATTGATCAGAAT+TGG + chr7.4:49084626-49084645 None:intergenic 40.0%
TGCCAAAAGTTTGGCAATAC+AGG + chr7.4:49085477-49085496 None:intergenic 40.0%
TGGATATAGGAATGGCAATC+GGG - chr7.4:49085795-49085814 MS.gene84431:intron 40.0%
TGTTCCTGATGATACACAGA+AGG - chr7.4:49083176-49083195 MS.gene84431:intron 40.0%
TTCAGAGAATCAAGTTCCTC+CGG - chr7.4:49081674-49081693 MS.gene84431:CDS 40.0%
TTGGTCACTGGGTTTATGAT+AGG - chr7.4:49082710-49082729 MS.gene84431:intron 40.0%
! ATACCTTTGCTGTCCTAACT+TGG + chr7.4:49083921-49083940 None:intergenic 40.0%
! CCCTTAATTTTCATGTGTCC+TGG - chr7.4:49084359-49084378 MS.gene84431:CDS 40.0%
! CCTGCTTGGTGAAATGAAAT+AGG + chr7.4:49082592-49082611 None:intergenic 40.0%
! GCTGCTTTCTGTGAATCATT+AGG + chr7.4:49083144-49083163 None:intergenic 40.0%
! GCTGTTTGCATTTTCTGTTC+AGG - chr7.4:49085550-49085569 MS.gene84431:CDS 40.0%
! GTCCTGTATTGCCAAACTTT+TGG - chr7.4:49085472-49085491 MS.gene84431:intron 40.0%
! TCGTGGGTTACAGAAAATAG+CGG - chr7.4:49081753-49081772 MS.gene84431:CDS 40.0%
! TGCGATCGTCTGATTTGTAT+TGG - chr7.4:49084518-49084537 MS.gene84431:CDS 40.0%
!! GACAGCAAAGGTATTTCACT+TGG - chr7.4:49083927-49083946 MS.gene84431:intron 40.0%
!! GAGCCAAGAGTATTACAACA+TGG + chr7.4:49082295-49082314 None:intergenic 40.0%
!! GTTGTCTTTAAGGCCGTAAA+GGG - chr7.4:49084424-49084443 MS.gene84431:CDS 40.0%
!! TGTTGTCTTTAAGGCCGTAA+AGG - chr7.4:49084423-49084442 MS.gene84431:CDS 40.0%
!!! GGGATTTCACTTTGGTTTTG+TGG - chr7.4:49084026-49084045 MS.gene84431:CDS 40.0%
!!! TGGTTTTGTGGAGTTTGAAG+AGG - chr7.4:49084038-49084057 MS.gene84431:CDS 40.0%
AAAGCCCTGAGCATGTACAT+AGG - chr7.4:49082019-49082038 MS.gene84431:CDS 45.0%
AACAGATCCACCAGTTACAG+AGG + chr7.4:49083496-49083515 None:intergenic 45.0%
AAGTTTGGCCCTATCAAGAG+TGG - chr7.4:49083889-49083908 MS.gene84431:intron 45.0%
AATAGCCCTCAGCTGTCAAA+AGG + chr7.4:49083807-49083826 None:intergenic 45.0%
ACACCCATATGCCTATGCAT+TGG - chr7.4:49082322-49082341 MS.gene84431:intron 45.0%
ACACGAGCAGTGGTAGATTT+AGG + chr7.4:49085925-49085944 None:intergenic 45.0%
ACCATTTGTTTCAGGCACAC+TGG + chr7.4:49083632-49083651 None:intergenic 45.0%
ACGTTGTGGTAGAGGAAAAG+AGG - chr7.4:49084645-49084664 MS.gene84431:intron 45.0%
ACTCTTGTGCATCCACAGAT+AGG + chr7.4:49082667-49082686 None:intergenic 45.0%
ATATCCAGACCAATGTTCGG+AGG + chr7.4:49082367-49082386 None:intergenic 45.0%
ATATCTGTGACTGCTGAGGA+TGG - chr7.4:49083024-49083043 MS.gene84431:intron 45.0%
ATGGCATGCAAACAAGGAAC+AGG + chr7.4:49084788-49084807 None:intergenic 45.0%
ATTTATTTGAGAGGGCTGCC+TGG - chr7.4:49083829-49083848 MS.gene84431:intron 45.0%
CACAGAAGCAGCTGTCATTA+CGG + chr7.4:49083557-49083576 None:intergenic 45.0%
CACGACTGTTATAGTCTCCA+CGG + chr7.4:49085708-49085727 None:intergenic 45.0%
CATACCTCATGTGTACCCTT+TGG - chr7.4:49082183-49082202 MS.gene84431:intron 45.0%
CATCGGCATCACAACTACAA+TGG - chr7.4:49082089-49082108 MS.gene84431:intron 45.0%
CATGTTACCATTCTCAGGAG+AGG + chr7.4:49082876-49082895 None:intergenic 45.0%
CCAACACTGAAAGAAGGTTG+AGG + chr7.4:49082969-49082988 None:intergenic 45.0%
CCTCAACCTTCTTTCAGTGT+TGG - chr7.4:49082966-49082985 MS.gene84431:intron 45.0%
GAGGATCCAACACTGAAAGA+AGG + chr7.4:49082975-49082994 None:intergenic 45.0%
GAGTCATTGTCTTGGTCACT+GGG - chr7.4:49082699-49082718 MS.gene84431:intron 45.0%
GCAAATATCTGTGACTGCTG+AGG - chr7.4:49083020-49083039 MS.gene84431:intron 45.0%
GCAAGTGTCTGTTGAAGAAG+AGG - chr7.4:49083086-49083105 MS.gene84431:intron 45.0%
GCAGTCACAGATATTTGCTC+TGG + chr7.4:49083018-49083037 None:intergenic 45.0%
GCTACCTTCTGTGTATCATC+AGG + chr7.4:49083183-49083202 None:intergenic 45.0%
GGAAGAGACTCTTACAATGG+AGG + chr7.4:49083292-49083311 None:intergenic 45.0%
GGAAGAGGGGAATATGGATA+TGG - chr7.4:49085775-49085794 MS.gene84431:intron 45.0%
GGAGATCCAATGTCATGATC+AGG + chr7.4:49082851-49082870 None:intergenic 45.0%
GGATATAGGAATGGCAATCG+GGG - chr7.4:49085796-49085815 MS.gene84431:intron 45.0%
GGCATCAGCAAGTAATTAGG+TGG + chr7.4:49082419-49082438 None:intergenic 45.0%
GGTAGCCTCCAAAGACATTA+TGG - chr7.4:49084906-49084925 MS.gene84431:CDS 45.0%
GGTGGATCTGTTGTAGCTTA+AGG - chr7.4:49083504-49083523 MS.gene84431:intron 45.0%
GGTGGCCAGCAATTTATTGA+AGG + chr7.4:49084869-49084888 None:intergenic 45.0%
GTAACATGATGCTTAAGGCG+TGG - chr7.4:49082888-49082907 MS.gene84431:intron 45.0%
TCAACAAGAACCTCAGGAAC+CGG + chr7.4:49083117-49083136 None:intergenic 45.0%
TCCAGTGTGCCTGAAACAAA+TGG - chr7.4:49083628-49083647 MS.gene84431:intron 45.0%
TGTCCAAGTTAGGACAGCAA+AGG - chr7.4:49083915-49083934 MS.gene84431:intron 45.0%
TGTTGAAGAAGAGGAAGCTC+CGG - chr7.4:49083095-49083114 MS.gene84431:intron 45.0%
TTCCTTGCTCCTCAAGAGAA+AGG - chr7.4:49082770-49082789 MS.gene84431:intron 45.0%
TTTCCTCTACCACAACGTGA+CGG + chr7.4:49084643-49084662 None:intergenic 45.0%
TTTGTTTCAGGCACACTGGA+TGG + chr7.4:49083628-49083647 None:intergenic 45.0%
! ACAGACACTTGCCCATTTTC+TGG + chr7.4:49083078-49083097 None:intergenic 45.0%
! AGAACCAAAGGGTACACATG+AGG + chr7.4:49082190-49082209 None:intergenic 45.0%
! ATGCACAAGAGTCTTTTGGC+GGG - chr7.4:49082675-49082694 MS.gene84431:intron 45.0%
! GATGCACAAGAGTCTTTTGG+CGG - chr7.4:49082674-49082693 MS.gene84431:intron 45.0%
! GTGGATGCACAAGAGTCTTT+TGG - chr7.4:49082671-49082690 MS.gene84431:intron 45.0%
! TCTGTTCAGGTTATGGCAGA+GGG - chr7.4:49085563-49085582 MS.gene84431:CDS 45.0%
! TTCTGTTCAGGTTATGGCAG+AGG - chr7.4:49085562-49085581 MS.gene84431:CDS 45.0%
!!! CTTTTTTGTAGCTGGGTGCT+AGG + chr7.4:49085186-49085205 None:intergenic 45.0%
AAAGGAGCAACATGTGCCTG+TGG + chr7.4:49084165-49084184 None:intergenic 50.0%
AACGGCTATTGAAGTCTCCG+CGG + chr7.4:49085744-49085763 None:intergenic 50.0%
AGAAGCAGCTGTCATTACGG+AGG + chr7.4:49083554-49083573 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr7.4:49082121-49082140 None:intergenic 50.0%
AGCCTTTCTCTTGAGGAGCA+AGG + chr7.4:49082775-49082794 None:intergenic 50.0%
ATCTACCACTGCTCGTGTTC+CGG - chr7.4:49085927-49085946 MS.gene84431:CDS 50.0%
ATGGAAGGCCACTCAGTTTC+AGG - chr7.4:49085596-49085615 MS.gene84431:CDS 50.0%
CAAACCTCCGAACATTGGTC+TGG - chr7.4:49082360-49082379 MS.gene84431:intron 50.0%
CCACTCAGTTTCAGGGATGA+GGG - chr7.4:49085604-49085623 MS.gene84431:CDS 50.0%
CGTGGAGACTATAACAGTCG+TGG - chr7.4:49085706-49085725 MS.gene84431:intron 50.0%
CTCGGTCGTCCTGAATCAAA+TGG - chr7.4:49082063-49082082 MS.gene84431:CDS 50.0%
GACCGAGCTTACTGACATCT+TGG + chr7.4:49082050-49082069 None:intergenic 50.0%
GACTGCTGAGGATGGTGATA+GGG - chr7.4:49083032-49083051 MS.gene84431:intron 50.0%
GATCAATGACCGTCACGTTG+TGG - chr7.4:49084631-49084650 MS.gene84431:intron 50.0%
GATCACATGGGAACCAATGG+TGG - chr7.4:49085859-49085878 MS.gene84431:intron 50.0%
GCAAGTAATTAGGTGGGGTC+TGG + chr7.4:49082412-49082431 None:intergenic 50.0%
GGAGTCATTGTCTTGGTCAC+TGG - chr7.4:49082698-49082717 MS.gene84431:intron 50.0%
GGGTACACATGAGGTATGAG+AGG + chr7.4:49082181-49082200 None:intergenic 50.0%
GTTACCATTCTCAGGAGAGG+CGG + chr7.4:49082873-49082892 None:intergenic 50.0%
TAGTGCGGAGATCCTATCTG+TGG - chr7.4:49082652-49082671 MS.gene84431:intron 50.0%
TATAGGAATGGCAATCGGGG+AGG - chr7.4:49085799-49085818 MS.gene84431:intron 50.0%
TGACTGCTGAGGATGGTGAT+AGG - chr7.4:49083031-49083050 MS.gene84431:intron 50.0%
TGGAAGGCCACTCAGTTTCA+GGG - chr7.4:49085597-49085616 MS.gene84431:CDS 50.0%
TTACCATTCTCAGGAGAGGC+GGG + chr7.4:49082872-49082891 None:intergenic 50.0%
TTTGGCCCTATCAAGAGTGG+CGG - chr7.4:49083892-49083911 MS.gene84431:intron 50.0%
! GAGGGCATGGAAACTATGGA+AGG - chr7.4:49085581-49085600 MS.gene84431:CDS 50.0%
! GCAAGAGGGCATGGAAACTA+TGG - chr7.4:49085628-49085647 MS.gene84431:CDS 50.0%
! GGTTGCCTTTTGACAGCTGA+GGG - chr7.4:49083799-49083818 MS.gene84431:intron 50.0%
! TGCACAAGAGTCTTTTGGCG+GGG - chr7.4:49082676-49082695 MS.gene84431:intron 50.0%
! TGGTTGCCTTTTGACAGCTG+AGG - chr7.4:49083798-49083817 MS.gene84431:intron 50.0%
! TGTGGGGTTCATTGGTTGCT+TGG - chr7.4:49085285-49085304 MS.gene84431:intron 50.0%
!! GGAGGTTTTTCTAGTCGTGG+TGG - chr7.4:49085817-49085836 MS.gene84431:intron 50.0%
!! TTTTCTAGTCGTGGTGGCGA+TGG - chr7.4:49085823-49085842 MS.gene84431:intron 50.0%
AATGGCCGTGGCGACTACAA+TGG - chr7.4:49085682-49085701 MS.gene84431:intron 55.0%
ACCCCCCAGTACGATTCATG+CGG + chr7.4:49085885-49085904 None:intergenic 55.0%
ACGATTCATGCGGCCACCAT+TGG + chr7.4:49085875-49085894 None:intergenic 55.0%
ACTTGTGTCTCCAGCACAGG+AGG + chr7.4:49082994-49083013 None:intergenic 55.0%
AGAGTGGCGGTGTCCAAGTT+AGG - chr7.4:49083905-49083924 MS.gene84431:intron 55.0%
AGGGCATGTGTAGCAGTTCC+AGG + chr7.4:49083850-49083869 None:intergenic 55.0%
CACGGCCATTGTAGTCTCCA+CGG + chr7.4:49085672-49085691 None:intergenic 55.0%
CAGACGATCGCACACAGAAC+AGG + chr7.4:49084510-49084529 None:intergenic 55.0%
CCCTCATCCCTGAAACTGAG+TGG + chr7.4:49085607-49085626 None:intergenic 55.0%
CGTGGAGACTATAATGGCCG+CGG - chr7.4:49085724-49085743 MS.gene84431:intron 55.0%
GCAGCTGTCATTACGGAGGA+CGG + chr7.4:49083550-49083569 None:intergenic 55.0%
GCCACTCAGTTTCAGGGATG+AGG - chr7.4:49085603-49085622 MS.gene84431:CDS 55.0%
GGAACTTGTGTCTCCAGCAC+AGG + chr7.4:49082997-49083016 None:intergenic 55.0%
GGACACCGCCACTCTTGATA+GGG + chr7.4:49083900-49083919 None:intergenic 55.0%
GTGGCCGCATGAATCGTACT+GGG - chr7.4:49085878-49085897 MS.gene84431:intron 55.0%
TCAGGCACACTGGATGGTGA+AGG + chr7.4:49083622-49083641 None:intergenic 55.0%
TCAGGGATGAGGGAGCAAGA+GGG - chr7.4:49085614-49085633 MS.gene84431:CDS 55.0%
TCAGGTTATGGCAGAGGGCA+TGG - chr7.4:49085568-49085587 MS.gene84431:CDS 55.0%
TGACCGTCACGTTGTGGTAG+AGG - chr7.4:49084637-49084656 MS.gene84431:intron 55.0%
TGCTGCGCTAAGTGCAATCG+AGG - chr7.4:49084065-49084084 MS.gene84431:CDS 55.0%
TGGACACCGCCACTCTTGAT+AGG + chr7.4:49083901-49083920 None:intergenic 55.0%
TGGCCGCATGAATCGTACTG+GGG - chr7.4:49085879-49085898 MS.gene84431:intron 55.0%
TTCAGGGATGAGGGAGCAAG+AGG - chr7.4:49085613-49085632 MS.gene84431:CDS 55.0%
! AGTGTTGGATCCTCCTGTGC+TGG - chr7.4:49082981-49083000 MS.gene84431:intron 55.0%
! GCACAAGAGTCTTTTGGCGG+GGG - chr7.4:49082677-49082696 MS.gene84431:intron 55.0%
! GGCAGAGGGCATGGAAACTA+TGG - chr7.4:49085577-49085596 MS.gene84431:CDS 55.0%
!! CATACAACATCAGGTGCCGG+AGG + chr7.4:49081693-49081712 None:intergenic 55.0%
!! CGGGGAGGTTTTTCTAGTCG+TGG - chr7.4:49085814-49085833 MS.gene84431:intron 55.0%
AGAGGAAGCTCCGGTTCCTG+AGG - chr7.4:49083104-49083123 MS.gene84431:intron 60.0%
CACGGCCATTGTAGTCGCCA+CGG + chr7.4:49085690-49085709 None:intergenic 60.0%
CGTGGAGACTACAATGGCCG+TGG - chr7.4:49085670-49085689 MS.gene84431:intron 60.0%
GATGAGGGAGCAAGAGGGCA+TGG - chr7.4:49085619-49085638 MS.gene84431:CDS 60.0%
GCCGCATGAATCGTACTGGG+GGG - chr7.4:49085881-49085900 MS.gene84431:intron 60.0%
GGCCGCATGAATCGTACTGG+GGG - chr7.4:49085880-49085899 MS.gene84431:intron 60.0%
GGTGGCCGCATGAATCGTAC+TGG - chr7.4:49085877-49085896 MS.gene84431:intron 60.0%
GTGTTCCGGCCTCTGCTTGA+TGG - chr7.4:49085941-49085960 MS.gene84431:CDS 60.0%
TCTCCCGCCTCTCCTGAGAA+TGG - chr7.4:49082866-49082885 MS.gene84431:intron 60.0%
TGGCGGGGGAGTCATTGTCT+TGG - chr7.4:49082691-49082710 MS.gene84431:intron 60.0%
AGAGGCCGGAACACGAGCAG+TGG + chr7.4:49085935-49085954 None:intergenic 65.0%
CGTGGCGACTACAATGGCCG+TGG - chr7.4:49085688-49085707 MS.gene84431:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 49081666 49085960 49081666 ID=MS.gene84431
chr7.4 mRNA 49081666 49085960 49081666 ID=MS.gene84431.t1;Parent=MS.gene84431
chr7.4 exon 49085919 49085960 49085919 ID=MS.gene84431.t1.exon1;Parent=MS.gene84431.t1
chr7.4 CDS 49085919 49085960 49085919 ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1
chr7.4 exon 49085513 49085650 49085513 ID=MS.gene84431.t1.exon2;Parent=MS.gene84431.t1
chr7.4 CDS 49085513 49085650 49085513 ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1
chr7.4 exon 49084739 49085015 49084739 ID=MS.gene84431.t1.exon3;Parent=MS.gene84431.t1
chr7.4 CDS 49084739 49085015 49084739 ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1
chr7.4 exon 49084330 49084643 49084330 ID=MS.gene84431.t1.exon4;Parent=MS.gene84431.t1
chr7.4 CDS 49084330 49084643 49084330 ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1
chr7.4 exon 49083929 49084106 49083929 ID=MS.gene84431.t1.exon5;Parent=MS.gene84431.t1
chr7.4 CDS 49083929 49084106 49083929 ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1
chr7.4 exon 49083690 49083811 49083690 ID=MS.gene84431.t1.exon6;Parent=MS.gene84431.t1
chr7.4 CDS 49083690 49083811 49083690 ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1
chr7.4 exon 49083540 49083599 49083540 ID=MS.gene84431.t1.exon7;Parent=MS.gene84431.t1
chr7.4 CDS 49083540 49083599 49083540 ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1
chr7.4 exon 49081666 49082082 49081666 ID=MS.gene84431.t1.exon8;Parent=MS.gene84431.t1
chr7.4 CDS 49081666 49082082 49081666 ID=cds.MS.gene84431.t1;Parent=MS.gene84431.t1
Gene Sequence

>MS.gene84431

ATGGCAACTTCAGAGAATCAAGTTCCTCCGGCACCTGATGTTGTATGTATATCTATGTTCTTATTGTTTTTCATACAATGTTGTGAATCGTGGGTTACAGAAAATAGCGGTTTGTTCAAATGTTGCTACGCTTTAGTGCTATAGTTCCGCTATAGGCGTTATTTGAAAAAACTTTGTACAAAATAGTGTTTAGCGGAACAATAGTGCTATAGTGATGCTATAATCGCTATTTGACAACATTGGGATGATACATGATTTGATTTCTGTTAATGATAACATAGTTGACTGATTTTTAATGTGATTGGTTTAGGTTGGTCATGCCTTTGTTGAACAGTACTACTATATGTTGCATGAAAGCCCTGAGCATGTACATAGGTTTTACCAAGATGTCAGTAAGCTCGGTCGTCCTGAATCAAATGGTATCATCGGCATCACAACTACAATGGCTGTGAGTCCTCTCTCTCTCTCTCTCTCTCTCTGTTGCACTTTATAGCTGTCTATGTATTGGTTGTCCTCTCATACCTCATGTGTACCCTTTGGTTCTTGTGTGCATTTTCATATATACATGTATTCAATATTCATATCTCCAATTGGTTTGTACAATATCTTGTTTGACATTGATGTAACCATGTTGTAATACTCTTGGCTCTTACTCTACACCCATATGCCTATGCATTGGTGTAATTGTTTATTTCAAACCTCCGAACATTGGTCTGGATATGTATTGAAAAGATGCTGTAACTCCAGACCCCACCTAATTACTTGCTGATGCCTTTTAAATTTATTTCCATTGTACGATCCTCTAAATTCCCATTTGTTAACTTAGATTCTAATAAATATGGATTGAGTGTTAGAAGTGGTTGAACATGAAAACAATGAACTTAATCTTAATATATCTCTCTAAATTGTATATCTTAATGTATCCTATTTCATTTCACCAAGCAGGAAATTGACAAGAAGATACTGTCAATGGGTTATAGTGAACTTAGTGCGGAGATCCTATCTGTGGATGCACAAGAGTCTTTTGGCGGGGGAGTCATTGTCTTGGTCACTGGGTTTATGATAGGAAAGGACAACATTAAGCAGAAATTTACTCAATGTTTCTTCCTTGCTCCTCAAGAGAAAGGCTACTTTGTTTTGAATGATATTTTCAGATATGTTGATGAAAATGAAATCAAGGAACCTGATCATGACATTGGATCTCCCGCCTCTCCTGAGAATGGTAACATGATGCTTAAGGCGTGGTTTTATTAAGGGTTTTTGTTTCATACATTTGCCTGTTAACTTAAGTTGCTTATTTCCTCAACCTTCTTTCAGTGTTGGATCCTCCTGTGCTGGAGACACAAGTTCCAGAGCAAATATCTGTGACTGCTGAGGATGGTGATAGGGAAGAACTAGAAGTCTACAATCCAGAAAATGGGCAAGTGTCTGTTGAAGAAGAGGAAGCTCCGGTTCCTGAGGTTCTTGTTGAAATTCCTAATGATTCACAGAAAGCAGCTGGTTTTGATCATGTTCCTGATGATACACAGAAGGTAGCTGAATTGGCATCCCATGTTCCTGATGATACACAGAAGGTAGCTGAATTGGCATCCCAAATTGAAGAAGTGCCGAAGAAATCATATGCCTCCATTGTAAGAGTCTCTTCCATAAATTCCCTCTTTTCCTTTCTTGCTCTTTCTAGACTCTTACCGAGTTTTCATTGTAAATGTTAGTTGTTATATTCTTGACTCTATTACACTGGTGAAAATGCTGAAAATTAAACAGAATGATACTTTGATTCATTTTATCTAGAAGAGTAATAATTTCTAGAAGAATACTTATTATTTTCCTCTGTAACTGGTGGATCTGTTGTAGCTTAAGGTAATGAAAGAGGCTGCTGCTCCGTCCTCCGTAATGACAGCTGCTTCTGTGAGAACTTCTAATAAGATTCAAGAACAGCAGAGTGCTGCTGCACCTTCACCATCCAGTGTGCCTGAAACAAATGGTTCTAGTATAAGTACTAATGAAGGTGGAAACAATCAAGAAACTGAAGGTCTGGTGAACCATATATATATGTATATGTATGAGACTATTACTTGAATAGTTAAAAATTCCCTGCGTTTATCATAGTGATATTTATTGATGTGTTCAATTGGTTGCCTTTTGACAGCTGAGGGCTATTCAATTTATTTGAGAGGGCTGCCTGGAACTGCTACACATGCCCTTGTTGAGAATATGTTCAAGAAGTTTGGCCCTATCAAGAGTGGCGGTGTCCAAGTTAGGACAGCAAAGGTATTTCACTTGGCGATTCCCTGTTTTTTTGTTTTTTTTAAATGTTTGCTGCTAGCTAATAACTTTTTGGCATATTAATGGGTTTATCAGGGATTTCACTTTGGTTTTGTGGAGTTTGAAGAGGAAAGTGCTGCGCTAAGTGCAATCGAGGTATTTTATTGGATTTAACTTATCTTCAGAAATTCTATATTCAATCATGATTTTTGTTAGTTTCTTTCTACAAATCCACAGGCACATGTTGCTCCTTTGCCATCTTGTTCTACAGTGAAATTGAGTTGTACTTCAGTGCTTGTTAATATGATTGTTGTACTTTTCTTATGCTTCTGAGTTGTGGTTATCCTTTCTATTTATTTGCATGTAGTGTTTGTGTGGTGCAGATTAAATAGAAAGTTTTTGCTCCACTAAGTTCTCATTGTGTTTGGCCCTTAATTTTCATGTGTCCTGGCTGATTTTAGAAGTTTTGTTCATTACCACTGGATTATGTTATGTTGTCTTTAAGGCCGTAAAGGGTTAAATTCTTTTTTTATTTTTCATTTTTACACTTCGTTGCTTTTTTATTTGGTTTTTGGACCTGTTCTGTGTGCGATCGTCTGATTTGTATTGGTATACAACTGCTTTTTATATTTTATTCTTTAATTTGCATCTTTATTTGGTAGTCAATACTTTTATCTGCATTTCAGGCTTCACCAATTCTGATCAATGACCGTCACGTTGTGGTAGAGGAAAAGAGGTCAACTAATCGAGGCAAGTGTTTTTTTATTTAGTACTGGTTAATTTCACATCAAGGTTCCAAATTCCTATTTCTGCACATGATAACTATGAAATTTATTGGGTTCGTGTATGGATAGCCTGTTCCTTGTTTGCATGCCATAAGTTGTAAAGAGATTTCTCTCACACTGGACTCTATTTGACTATTAGTTGAAGCATTACCTTCAATAAATTGCTGGCCACCATTTCTCATAATTACAGGGTAGCCTCCAAAGACATTATGGAGTTGATAACTTCAATAAAATGTTTTTAAAACTTGGTTGTGTTGTTTTAAGCGTTTGTTTTCCTTTTGTTCAACAACTAGTGTAGATTTGAAGTCTCAAAGGTATTGATTTGGCCACTTTTTGATGGTTTATATTATTTCTAATTCTTAATTTTTCAAATCCTTGTACACTATGGAGTGTTTTAAATCCTTGTACACTATTGAGGGTTTTAAAAAGGATACAAAATGGTTATTTTGTTTGTCTGTTGCATATTGCCTAGCACCCAGCTACAAAAAAGCATATTACTATATGATATTTTTTATTACAAGTTTCTGTTTTCCAACTTTGTTGTGATAACTTTTTATTATGTTATATTTTGTGGGGTTCATTGGTTGCTTGGTCTTGTAATAAATTTTTCAGCAATTATTATACTATTATTTTCAACATTTTCTTATTTTGATATTATACGGCCTTATCAACATTTCAGCTCTACCAAGGACTTCTTATTATTGTTTTTAAAATTTTTGCTTTGAATTTACTTCCCAGAAAGAAATTATTTCAGAGGTCCTGTATTGCCAAACTTTTGGCATACAACTAGGGTTCTACTTAGCATTGCGTTGATTATATTGCATGTAGATGTCAGCTGTTTGCATTTTCTGTTCAGGTTATGGCAGAGGGCATGGAAACTATGGAAGGCCACTCAGTTTCAGGGATGAGGGAGCAAGAGGGCATGGAAACTATGGAAATAGCCGAAGTTTTGGCCGTGGAGACTACAATGGCCGTGGCGACTACAATGGCCGTGGAGACTATAACAGTCGTGGAGACTATAATGGCCGCGGAGACTTCAATAGCCGTTCAGACTTTAATGGAAGAGGGGAATATGGATATGGATATAGGAATGGCAATCGGGGAGGTTTTTCTAGTCGTGGTGGCGATGGATATCAGAGAAATGATCACATGGGAACCAATGGTGGCCGCATGAATCGTACTGGGGGGTCTTCTGTTAATTCAGCACCTAAATCTACCACTGCTCGTGTTCCGGCCTCTGCTTGA

Protein sequence

>MS.gene84431.t1

MATSENQVPPAPDVVGHAFVEQYYYMLHESPEHVHRFYQDVSKLGRPESNGIIGITTTMAEIDKKILSMGYSELSAEILSVDAQESFGGGVIVLVTGFMIGKDNIKQKFTQCFFLAPQEKGYFVLNDIFRYVDENEIKEPDHDIGSPASPENVLDPPVLETQVPEQISVTAEDGDREELEVYNPENGQVSVEEEEAPVPEVLVEIPNDSQKAAGFDHVPDDTQKVAELASHVPDDTQKVAELASQIEEVPKKSYASILKVMKEAAAPSSVMTAASVRTSNKIQEQQSAAAPSPSSVPETNGSSISTNEGGNNQETEAEGYSIYLRGLPGTATHALVENMFKKFGPIKSGGVQVRTAKGFHFGFVEFEEESAALSAIEMSAVCIFCSGYGRGHGNYGRPLSFRDEGARGHGNYGNSRSFGRGDYNGRGDYNGRGDYNSRGDYNGRGDFNSRSDFNGRGEYGYGYRNGNRGGFSSRGGDGYQRNDHMGTNGGRMNRTGGSSVNSAPKSTTARVPASA