Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84510.t1 | KEH30648.1 | 90.9 | 497 | 14 | 2 | 1 | 472 | 1 | 491 | 1.50E-244 | 855.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84510.t1 | Q9LW77 | 70.9 | 413 | 91 | 4 | 1 | 385 | 1 | 412 | 3.3e-155 | 549.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84510.t1 | A0A072UNL4 | 90.9 | 497 | 14 | 2 | 1 | 472 | 1 | 491 | 1.1e-244 | 855.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene052128 | MS.gene84510 | PPI |
| MS.gene30950 | MS.gene84510 | PPI |
| MS.gene31164 | MS.gene84510 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84510.t1 | MTR_4g077800 | 90.946 | 497 | 14 | 2 | 1 | 472 | 1 | 491 | 0.0 | 915 |
| MS.gene84510.t1 | MTR_4g077800 | 90.816 | 490 | 14 | 2 | 1 | 465 | 1 | 484 | 0.0 | 903 |
| MS.gene84510.t1 | MTR_5g007710 | 72.619 | 504 | 96 | 6 | 1 | 468 | 1 | 498 | 0.0 | 719 |
| MS.gene84510.t1 | MTR_5g007710 | 79.455 | 404 | 56 | 2 | 1 | 379 | 1 | 402 | 0.0 | 665 |
| MS.gene84510.t1 | MTR_4g077703 | 95.000 | 80 | 4 | 0 | 387 | 466 | 25 | 104 | 1.05e-47 | 160 |
| MS.gene84510.t1 | MTR_3g007760 | 25.634 | 355 | 193 | 9 | 42 | 331 | 60 | 408 | 1.24e-20 | 95.5 |
| MS.gene84510.t1 | MTR_3g007760 | 25.926 | 324 | 169 | 9 | 62 | 320 | 57 | 374 | 5.13e-19 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84510.t1 | AT3G16090 | 70.944 | 413 | 91 | 4 | 1 | 385 | 1 | 412 | 0.0 | 592 |
| MS.gene84510.t1 | AT1G65040 | 70.603 | 398 | 112 | 3 | 1 | 393 | 1 | 398 | 0.0 | 591 |
| MS.gene84510.t1 | AT1G65040 | 66.983 | 421 | 111 | 3 | 1 | 393 | 1 | 421 | 0.0 | 584 |
| MS.gene84510.t1 | AT1G65040 | 56.313 | 396 | 124 | 6 | 1 | 393 | 1 | 350 | 8.81e-150 | 432 |
| MS.gene84510.t1 | AT1G65040 | 70.000 | 280 | 79 | 3 | 119 | 393 | 1 | 280 | 3.86e-142 | 410 |
| MS.gene84510.t1 | AT1G65040 | 71.488 | 242 | 66 | 2 | 155 | 393 | 1 | 242 | 2.37e-124 | 363 |
| MS.gene84510.t1 | AT1G65040 | 74.123 | 228 | 58 | 1 | 151 | 377 | 23 | 250 | 1.12e-123 | 361 |
| MS.gene84510.t1 | AT4G25230 | 25.893 | 336 | 182 | 8 | 32 | 305 | 49 | 379 | 1.55e-21 | 98.2 |
| MS.gene84510.t1 | AT4G25230 | 25.893 | 336 | 182 | 8 | 32 | 305 | 49 | 379 | 1.55e-21 | 98.2 |
| MS.gene84510.t1 | AT4G25230 | 25.893 | 336 | 182 | 8 | 32 | 305 | 49 | 379 | 1.55e-21 | 98.2 |
| MS.gene84510.t1 | AT5G51450 | 25.137 | 366 | 211 | 9 | 36 | 340 | 53 | 416 | 5.59e-17 | 84.0 |
| MS.gene84510.t1 | AT5G51450 | 25.137 | 366 | 211 | 9 | 36 | 340 | 53 | 416 | 7.07e-17 | 83.6 |
| MS.gene84510.t1 | AT5G01960 | 33.333 | 135 | 84 | 4 | 189 | 319 | 285 | 417 | 1.46e-12 | 69.7 |
| MS.gene84510.t1 | AT2G44581 | 39.241 | 79 | 43 | 2 | 240 | 314 | 44 | 121 | 8.43e-11 | 60.5 |
Find 106 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGTATATGTGCTTCTTTC+TGG | 0.129475 | 3.1:-45609098 | MS.gene84510:CDS |
| CTATGTCAGTGACATGCTTA+TGG | 0.292617 | 3.1:-45609191 | MS.gene84510:CDS |
| ATTTGATTTATCAGAAACTA+TGG | 0.304267 | 3.1:-45608183 | MS.gene84510:intron |
| TCTAATAATGCTGAGCTTGA+TGG | 0.304456 | 3.1:-45606009 | MS.gene84510:CDS |
| GGGAGCTATACGAGGCATTT+AGG | 0.325679 | 3.1:-45608140 | MS.gene84510:CDS |
| ACTCACGAATTAAGCTCTTC+AGG | 0.328266 | 3.1:+45608036 | None:intergenic |
| TGAACCACTGATCTTTGAAC+TGG | 0.362927 | 3.1:+45606036 | None:intergenic |
| AGCTCTTCAGGGGTTGCATC+TGG | 0.367949 | 3.1:+45608048 | None:intergenic |
| GCAAGCATGGAGGGAGGTTA+TGG | 0.389288 | 3.1:-45609909 | MS.gene84510:CDS |
| AATGCAATTGTACCTCGTTC+TGG | 0.389760 | 3.1:+45605821 | None:intergenic |
| AAGAAGCACCAAACTGATCT+TGG | 0.399595 | 3.1:+45610030 | None:intergenic |
| CATGCAGCTCACATGACTTA+TGG | 0.401741 | 3.1:-45605877 | MS.gene84510:CDS |
| CTGGTTGTCCCATCAGAAAA+TGG | 0.403116 | 3.1:-45607801 | MS.gene84510:CDS |
| TGCAATTACTATCTTTAGAC+AGG | 0.408286 | 3.1:-45609876 | MS.gene84510:CDS |
| TACATTCCTTGCCATGGTTA+CGG | 0.408709 | 3.1:-45609843 | MS.gene84510:CDS |
| AATCAAGGCTTTGCATTGGT+TGG | 0.413236 | 3.1:-45609810 | MS.gene84510:CDS |
| AAACCATTGCCGGATAAAAC+TGG | 0.421285 | 3.1:+45610065 | None:intergenic |
| AGCAACTTCCAAGATCAGTT+TGG | 0.433214 | 3.1:-45610038 | MS.gene84510:CDS |
| TACGGCACTCTTGTTAATCA+AGG | 0.437977 | 3.1:-45609825 | MS.gene84510:CDS |
| ATGTTCATTGCCTCCGATCA+TGG | 0.438328 | 3.1:-45607860 | MS.gene84510:CDS |
| CTCTATTACATTCCTTGCCA+TGG | 0.443815 | 3.1:-45609849 | MS.gene84510:CDS |
| CTCACGAATTAAGCTCTTCA+GGG | 0.447017 | 3.1:+45608037 | None:intergenic |
| ACTAGCAACCAAGCAGGCTT+CGG | 0.448334 | 3.1:-45609658 | MS.gene84510:CDS |
| TATGTGGCAGTTAACTAAAA+AGG | 0.449529 | 3.1:-45609978 | MS.gene84510:CDS |
| TCTTAGTTTAATTGCCACTT+TGG | 0.452976 | 3.1:-45610119 | MS.gene84510:CDS |
| GTTGCTAAATAAACCATTGC+CGG | 0.454510 | 3.1:+45610055 | None:intergenic |
| CATGCTTATGGAGGGGCAAT+GGG | 0.466130 | 3.1:-45609179 | MS.gene84510:CDS |
| ATTGCTTACCATGCAAAAGT+TGG | 0.470036 | 3.1:+45606762 | None:intergenic |
| CAACCAGTGCTCTGCAGGTA+GGG | 0.482864 | 3.1:+45607817 | None:intergenic |
| TGGGACAACCAGTGCTCTGC+AGG | 0.483896 | 3.1:+45607812 | None:intergenic |
| TCCAAGTAAAACGTGAAGAC+TGG | 0.484698 | 3.1:+45609148 | None:intergenic |
| GAAAATGGAACAACTGCTAC+GGG | 0.489223 | 3.1:-45607786 | MS.gene84510:CDS |
| AGGTACAATTGCATTCTTTG+TGG | 0.489399 | 3.1:-45605813 | MS.gene84510:CDS |
| ACATGCTTATGGAGGGGCAA+TGG | 0.490906 | 3.1:-45609180 | MS.gene84510:CDS |
| CTCATTAAGCCTCTCAACCT+CGG | 0.492729 | 3.1:+45609931 | None:intergenic |
| TGTTAATCAAGGCTTTGCAT+TGG | 0.492811 | 3.1:-45609814 | MS.gene84510:CDS |
| TTTGGTGCTTCTTCCCAACA+TGG | 0.493961 | 3.1:-45610020 | MS.gene84510:CDS |
| GATCGAAACCGAAGCCTGCT+TGG | 0.497383 | 3.1:+45609650 | None:intergenic |
| TTATGGAGAGGGATCCCAGC+TGG | 0.499178 | 3.1:-45605860 | MS.gene84510:CDS |
| GCTCAAACTGAGGTTGGCGA+TGG | 0.505128 | 3.1:-45606879 | MS.gene84510:CDS |
| AGCTCAGCTCAAACTGAGGT+TGG | 0.506186 | 3.1:-45606885 | MS.gene84510:CDS |
| CTCAAACTGAGGTTGGCGAT+GGG | 0.510685 | 3.1:-45606878 | MS.gene84510:CDS |
| TCTCAAACTTACAGCTCCCC+TGG | 0.510823 | 3.1:-45606075 | MS.gene84510:intron |
| CATGATGACTAGAGCCATGT+TGG | 0.512170 | 3.1:+45610006 | None:intergenic |
| GTGTTCCTTTGCACTTAATG+AGG | 0.514458 | 3.1:-45608161 | MS.gene84510:CDS |
| GTAGACGAGGATGCATTCAT+TGG | 0.516455 | 3.1:+45605934 | None:intergenic |
| AAGAGAACAGGGGAAGGCAC+TGG | 0.518999 | 3.1:-45606909 | MS.gene84510:intron |
| CAAAAGCAGTTTGTGATCCC+TGG | 0.521828 | 3.1:-45605961 | MS.gene84510:CDS |
| ACAACCAGTGCTCTGCAGGT+AGG | 0.540446 | 3.1:+45607816 | None:intergenic |
| ACCACTGATCTTTGAACTGG+GGG | 0.541591 | 3.1:+45606039 | None:intergenic |
| GAACCACTGATCTTTGAACT+GGG | 0.542985 | 3.1:+45606037 | None:intergenic |
| AACTGAGGTTGGCGATGGGG+TGG | 0.547346 | 3.1:-45606874 | MS.gene84510:CDS |
| TTCGAGAAGCCGAGGTTGAG+AGG | 0.548154 | 3.1:-45609940 | MS.gene84510:CDS |
| TACCATGCAAAAGTTGGAGA+AGG | 0.548413 | 3.1:+45606768 | None:intergenic |
| ATGATATGTAATAGCCAAAG+TGG | 0.552176 | 3.1:+45610105 | None:intergenic |
| AGCTCCCTCATTAAGTGCAA+AGG | 0.553701 | 3.1:+45608156 | None:intergenic |
| TTGCCCTACCTGCAGAGCAC+TGG | 0.558354 | 3.1:-45607820 | MS.gene84510:CDS |
| GATGCATTCATTGGTCCACC+AGG | 0.558594 | 3.1:+45605943 | None:intergenic |
| GTCAGTGACATGCTTATGGA+GGG | 0.559139 | 3.1:-45609187 | MS.gene84510:CDS |
| AAATGGAACAACTGCTACGG+GGG | 0.559604 | 3.1:-45607784 | MS.gene84510:CDS |
| AGAAAATGGAACAACTGCTA+CGG | 0.562510 | 3.1:-45607787 | MS.gene84510:CDS |
| GCATTTACTAGCAACCAAGC+AGG | 0.564264 | 3.1:-45609664 | MS.gene84510:CDS |
| TGTTCCTTTGCACTTAATGA+GGG | 0.564325 | 3.1:-45608160 | MS.gene84510:CDS |
| ATGATGACTAGAGCCATGTT+GGG | 0.564344 | 3.1:+45610007 | None:intergenic |
| GCTTAATGAGCAAGCATGGA+GGG | 0.570543 | 3.1:-45609918 | MS.gene84510:CDS |
| ATGCGGTTGCAGACATATGC+TGG | 0.576651 | 3.1:-45610142 | MS.gene84510:CDS |
| AGAGGCTTAATGAGCAAGCA+TGG | 0.584570 | 3.1:-45609922 | MS.gene84510:CDS |
| GCTGCCGCTCTAGCCATGAT+CGG | 0.589627 | 3.1:+45607847 | None:intergenic |
| CTCTTCACGACAGATGATGC+AGG | 0.590049 | 3.1:+45607923 | None:intergenic |
| GGGGATAAAGAGTGTAGCCA+GGG | 0.590625 | 3.1:+45606058 | None:intergenic |
| TCACTTCTAACATGAATGAT+CGG | 0.592324 | 3.1:-45608074 | MS.gene84510:CDS |
| TATGGAGAGGGATCCCAGCT+GGG | 0.592564 | 3.1:-45605859 | MS.gene84510:CDS |
| TAAAGATAGTAATTGCAAAG+AGG | 0.597781 | 3.1:+45609882 | None:intergenic |
| GCCGCTCTAGCCATGATCGG+AGG | 0.598124 | 3.1:+45607850 | None:intergenic |
| GCTGCATGTGTTTGAGATGG+TGG | 0.598269 | 3.1:+45605892 | None:intergenic |
| TGGTTCTCTTCGAGAAGCCG+AGG | 0.599332 | 3.1:-45609948 | MS.gene84510:CDS |
| TAACAAGAGTGCCGTAACCA+TGG | 0.600859 | 3.1:+45609832 | None:intergenic |
| TAGTCATCATGTGTGTTATG+TGG | 0.603251 | 3.1:-45609994 | MS.gene84510:CDS |
| GCCTCCGATCATGGCTAGAG+CGG | 0.604085 | 3.1:-45607851 | MS.gene84510:CDS |
| AACCACTGATCTTTGAACTG+GGG | 0.608953 | 3.1:+45606038 | None:intergenic |
| TGTCAGTGACATGCTTATGG+AGG | 0.609892 | 3.1:-45609188 | MS.gene84510:CDS |
| TGGCTTGTGATAATTTGAGT+CGG | 0.612752 | 3.1:-45606854 | MS.gene84510:CDS |
| TGAGCTGCATGTGTTTGAGA+TGG | 0.613105 | 3.1:+45605889 | None:intergenic |
| TGGAAGCTCAGCTCAAACTG+AGG | 0.613121 | 3.1:-45606889 | MS.gene84510:CDS |
| ACCATGCAAAAGTTGGAGAA+GGG | 0.628689 | 3.1:+45606769 | None:intergenic |
| CAGTCAGATGCTCATCGACA+AGG | 0.633181 | 3.1:-45607747 | MS.gene84510:intron |
| TCACGAATTAAGCTCTTCAG+GGG | 0.633545 | 3.1:+45608038 | None:intergenic |
| GCTCACATGACTTATGGAGA+GGG | 0.637860 | 3.1:-45605871 | MS.gene84510:CDS |
| AGCTCACATGACTTATGGAG+AGG | 0.638406 | 3.1:-45605872 | MS.gene84510:CDS |
| TCAAACTGAGGTTGGCGATG+GGG | 0.640483 | 3.1:-45606877 | MS.gene84510:CDS |
| TCAGTGACATGCTTATGGAG+GGG | 0.644546 | 3.1:-45609186 | MS.gene84510:CDS |
| AGAGTGCCGTAACCATGGCA+AGG | 0.651932 | 3.1:+45609837 | None:intergenic |
| CTTAATGAGGGAGCTATACG+AGG | 0.654433 | 3.1:-45608148 | MS.gene84510:CDS |
| GAAGCTTTGCACTGTAGACG+AGG | 0.654510 | 3.1:+45605921 | None:intergenic |
| TGAGACAACACAGACACGGA+AGG | 0.658650 | 3.1:+45609755 | None:intergenic |
| TGTCGATGAGCATCTGACTG+TGG | 0.667132 | 3.1:+45607750 | None:intergenic |
| GGCTTAATGAGCAAGCATGG+AGG | 0.669584 | 3.1:-45609919 | MS.gene84510:CDS |
| AAGCAGTTTGTGATCCCTGG+TGG | 0.673279 | 3.1:-45605958 | MS.gene84510:CDS |
| AAGTGATCTTACGATAACGC+AGG | 0.678184 | 3.1:+45608091 | None:intergenic |
| AATGGAACAACTGCTACGGG+GGG | 0.692034 | 3.1:-45607783 | MS.gene84510:CDS |
| TAATGAGCAAGCATGGAGGG+AGG | 0.696339 | 3.1:-45609915 | MS.gene84510:CDS |
| AAAATGGAACAACTGCTACG+GGG | 0.697725 | 3.1:-45607785 | MS.gene84510:CDS |
| GGGATAAAGAGTGTAGCCAG+GGG | 0.711042 | 3.1:+45606059 | None:intergenic |
| ATGCATTCATTGGTCCACCA+GGG | 0.712072 | 3.1:+45605944 | None:intergenic |
| TCAAACAAAACTCCAGAACG+AGG | 0.714394 | 3.1:-45605833 | MS.gene84510:CDS |
| ACTGCAAAGAAGCTTCTATG+CGG | 0.744439 | 3.1:-45607894 | MS.gene84510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGAATAAAAAAATTAAC+GGG | + | chr3.1:45608419-45608438 | None:intergenic | 10.0% |
| !!! | AAAATATTCATACTTTTTTT+GGG | - | chr3.1:45608816-45608835 | MS.gene84510:intron | 10.0% |
| !!! | ATGTTTAAATTATTTTTGAA+TGG | - | chr3.1:45608858-45608877 | MS.gene84510:intron | 10.0% |
| !!! | CAATATGTTATTTTTTAATT+CGG | + | chr3.1:45607180-45607199 | None:intergenic | 10.0% |
| !!! | TAAAATATTCATACTTTTTT+TGG | - | chr3.1:45608815-45608834 | MS.gene84510:intron | 10.0% |
| !!! | TCAATTTTTATTTTGTATAT+AGG | - | chr3.1:45610142-45610161 | MS.gene84510:CDS | 10.0% |
| !!! | TGTTTAAATTATTTTTGAAT+GGG | - | chr3.1:45608859-45608878 | MS.gene84510:intron | 10.0% |
| !! | AAAAAATGAAGAAATATAGT+TGG | - | chr3.1:45608254-45608273 | MS.gene84510:intron | 15.0% |
| !! | AAAATAAACAACATATACTA+TGG | + | chr3.1:45606909-45606928 | None:intergenic | 15.0% |
| !! | AAGAAAATTTATAAAATAGC+AGG | + | chr3.1:45608340-45608359 | None:intergenic | 15.0% |
| !! | AATTCTCTTTATAATGTTAT+AGG | - | chr3.1:45606565-45606584 | MS.gene84510:intron | 15.0% |
| !! | CAAAACTCTTAAATTAATAA+CGG | - | chr3.1:45609286-45609305 | MS.gene84510:intron | 15.0% |
| !! | CGAATTAAAAAATAACATAT+TGG | - | chr3.1:45607178-45607197 | MS.gene84510:intron | 15.0% |
| !!! | AAATATTCATACTTTTTTTG+GGG | - | chr3.1:45608817-45608836 | MS.gene84510:intron | 15.0% |
| !!! | AGTATGAATATTTTAGAATT+TGG | + | chr3.1:45608810-45608829 | None:intergenic | 15.0% |
| !!! | GTTTAAATTATTTTTGAATG+GGG | - | chr3.1:45608860-45608879 | MS.gene84510:intron | 15.0% |
| !!! | TAACTGTCTTTTTTATTTAT+TGG | - | chr3.1:45607477-45607496 | MS.gene84510:intron | 15.0% |
| !!! | TGAATCAATATTTTTAGATA+TGG | - | chr3.1:45607931-45607950 | MS.gene84510:CDS | 15.0% |
| !! | AAAAAACATGACAAACTATA+CGG | - | chr3.1:45608220-45608239 | MS.gene84510:intron | 20.0% |
| !! | AAAGGAAACAATCTTAATTT+AGG | + | chr3.1:45609498-45609517 | None:intergenic | 20.0% |
| !! | AAATTCTCTAACATAATTTC+TGG | - | chr3.1:45606351-45606370 | MS.gene84510:intron | 20.0% |
| !! | GAAATTTGATTACTTTAATC+TGG | - | chr3.1:45608882-45608901 | MS.gene84510:intron | 20.0% |
| !! | GATTTAACATTTAAAGAGAA+AGG | + | chr3.1:45609516-45609535 | None:intergenic | 20.0% |
| !! | GTATAACTTTCAACTATAAT+GGG | + | chr3.1:45606445-45606464 | None:intergenic | 20.0% |
| !! | TAAATCAAATTAAAGTCAGA+AGG | + | chr3.1:45607703-45607722 | None:intergenic | 20.0% |
| !!! | ACAAAAATGTTTTTAACTTC+TGG | + | chr3.1:45606534-45606553 | None:intergenic | 20.0% |
| !!! | ATTTGATTTATCAGAAACTA+TGG | - | chr3.1:45607713-45607732 | MS.gene84510:intron | 20.0% |
| !!! | GGATTCTAAATATTGATTTT+TGG | - | chr3.1:45607199-45607218 | MS.gene84510:intron | 20.0% |
| !!! | TAAATATATGTTTCTATCTC+AGG | - | chr3.1:45606632-45606651 | MS.gene84510:intron | 20.0% |
| !!! | TATTTTCAAAGCATTTCAAA+AGG | - | chr3.1:45606923-45606942 | MS.gene84510:intron | 20.0% |
| !!! | TCACTTATAAACATTTTTTC+AGG | + | chr3.1:45608524-45608543 | None:intergenic | 20.0% |
| !!! | TGACATTGTTAATTTTACTA+TGG | - | chr3.1:45606327-45606346 | MS.gene84510:intron | 20.0% |
| ! | AGAATCTGGATTTAAATTGT+AGG | - | chr3.1:45609422-45609441 | MS.gene84510:intron | 25.0% |
| ! | AGGACTAATCAGATTATTTA+AGG | - | chr3.1:45607153-45607172 | MS.gene84510:intron | 25.0% |
| ! | CATCTTATGAAAAATGGAAA+AGG | - | chr3.1:45609219-45609238 | MS.gene84510:CDS | 25.0% |
| ! | CGTATAACTTTCAACTATAA+TGG | + | chr3.1:45606446-45606465 | None:intergenic | 25.0% |
| ! | GTTATTTATTCATGGCTAAT+AGG | - | chr3.1:45607375-45607394 | MS.gene84510:intron | 25.0% |
| ! | TAAAGATAGTAATTGCAAAG+AGG | + | chr3.1:45606017-45606036 | None:intergenic | 25.0% |
| ! | TATTGACAACATATACACAT+AGG | - | chr3.1:45607103-45607122 | MS.gene84510:intron | 25.0% |
| ! | TCTCTTTATAATGTTATAGG+AGG | - | chr3.1:45606568-45606587 | MS.gene84510:intron | 25.0% |
| ! | TGAGTCAAAACATGTAAATT+TGG | + | chr3.1:45607025-45607044 | None:intergenic | 25.0% |
| ! | TTATAATGTTATAGGAGGTT+TGG | - | chr3.1:45606573-45606592 | MS.gene84510:intron | 25.0% |
| ! | TTATGAAAAATGGAAAAGGT+GGG | - | chr3.1:45609223-45609242 | MS.gene84510:CDS | 25.0% |
| !! | CAATTTTGTAGGATTTAGTT+AGG | - | chr3.1:45608567-45608586 | MS.gene84510:intron | 25.0% |
| !! | GAGAAAAAAGCATAAAAAAC+AGG | + | chr3.1:45607636-45607655 | None:intergenic | 25.0% |
| !! | TGCATTTAGTCTAAAATTCA+GGG | + | chr3.1:45607336-45607355 | None:intergenic | 25.0% |
| !! | TTGCATTTAGTCTAAAATTC+AGG | + | chr3.1:45607337-45607356 | None:intergenic | 25.0% |
| !!! | AGTTCGAATCATATCTTTTT+TGG | - | chr3.1:45606164-45606183 | MS.gene84510:intron | 25.0% |
| !!! | GTTCGAATCATATCTTTTTT+GGG | - | chr3.1:45606165-45606184 | MS.gene84510:intron | 25.0% |
| !!! | TTAACTAAAAAGGTGTTTCT+TGG | - | chr3.1:45605928-45605947 | MS.gene84510:CDS | 25.0% |
| ACTAAATGCAAGAACATGTA+AGG | - | chr3.1:45607346-45607365 | MS.gene84510:intron | 30.0% | |
| ACTATTGCACTTTGTATATG+CGG | - | chr3.1:45608294-45608313 | MS.gene84510:intron | 30.0% | |
| ATGAAGTTTAAATCATGCGA+GGG | + | chr3.1:45606864-45606883 | None:intergenic | 30.0% | |
| ATGATATGTAATAGCCAAAG+TGG | + | chr3.1:45605794-45605813 | None:intergenic | 30.0% | |
| ATTTGGACATTAGCACTATT+TGG | + | chr3.1:45607008-45607027 | None:intergenic | 30.0% | |
| CAAAGATCATCTTAGATTCA+AGG | + | chr3.1:45609638-45609657 | None:intergenic | 30.0% | |
| CTCTCTCATCTTATGAAAAA+TGG | - | chr3.1:45609213-45609232 | MS.gene84510:CDS | 30.0% | |
| CTGGATTTAAATTGTAGGAT+AGG | - | chr3.1:45609427-45609446 | MS.gene84510:intron | 30.0% | |
| CTTATGAAAAATGGAAAAGG+TGG | - | chr3.1:45609222-45609241 | MS.gene84510:CDS | 30.0% | |
| TATGAAGTTTAAATCATGCG+AGG | + | chr3.1:45606865-45606884 | None:intergenic | 30.0% | |
| TATGTATATGTGCTTCTTTC+TGG | - | chr3.1:45606798-45606817 | MS.gene84510:CDS | 30.0% | |
| TATGTGGCAGTTAACTAAAA+AGG | - | chr3.1:45605918-45605937 | MS.gene84510:CDS | 30.0% | |
| TATTTATTGGACATGATACC+TGG | - | chr3.1:45607490-45607509 | MS.gene84510:intron | 30.0% | |
| TCACTTCTAACATGAATGAT+CGG | - | chr3.1:45607822-45607841 | MS.gene84510:CDS | 30.0% | |
| TGCAATTACTATCTTTAGAC+AGG | - | chr3.1:45606020-45606039 | MS.gene84510:CDS | 30.0% | |
| TTTCAGTAACTACAGAAAAG+AGG | + | chr3.1:45609176-45609195 | None:intergenic | 30.0% | |
| TTTCTATGCAGTGAAATGTT+TGG | - | chr3.1:45609455-45609474 | MS.gene84510:intron | 30.0% | |
| ! | ATTCTCTTTTCCTATCTTCA+AGG | + | chr3.1:45607409-45607428 | None:intergenic | 30.0% |
| ! | CTTTGTTTCTTGAAGTTACA+AGG | + | chr3.1:45609694-45609713 | None:intergenic | 30.0% |
| ! | TAACATAATTTCTGGAAGGA+TGG | - | chr3.1:45606359-45606378 | MS.gene84510:intron | 30.0% |
| ! | TCTCTAACATAATTTCTGGA+AGG | - | chr3.1:45606355-45606374 | MS.gene84510:intron | 30.0% |
| ! | TCTTAGTTTAATTGCCACTT+TGG | - | chr3.1:45605777-45605796 | MS.gene84510:intron | 30.0% |
| ! | TTCTCTTTTCCTATCTTCAA+GGG | + | chr3.1:45607408-45607427 | None:intergenic | 30.0% |
| !! | AAAATTGACTTGTAAGGGAA+GGG | + | chr3.1:45608554-45608573 | None:intergenic | 30.0% |
| !! | CCTACAAAATTGACTTGTAA+GGG | + | chr3.1:45608559-45608578 | None:intergenic | 30.0% |
| !! | GAAAAAGTATTTATAAGCCG+TGG | - | chr3.1:45608736-45608755 | MS.gene84510:intron | 30.0% |
| !! | GGTTCAGTGTTATTTATTCA+TGG | - | chr3.1:45607367-45607386 | MS.gene84510:intron | 30.0% |
| !! | TCCTACAAAATTGACTTGTA+AGG | + | chr3.1:45608560-45608579 | None:intergenic | 30.0% |
| !! | TTTTGACTCATTGAAAGACT+TGG | - | chr3.1:45607035-45607054 | MS.gene84510:intron | 30.0% |
| !!! | ACTTCTCTTTTTGAGATGTA+AGG | - | chr3.1:45607595-45607614 | MS.gene84510:intron | 30.0% |
| !!! | AGAGCTCACATTTTTTTTGT+AGG | + | chr3.1:45608372-45608391 | None:intergenic | 30.0% |
| !!! | CTTCTCTTTTTGAGATGTAA+GGG | - | chr3.1:45607596-45607615 | MS.gene84510:intron | 30.0% |
| !!! | GAGCTCACATTTTTTTTGTA+GGG | + | chr3.1:45608371-45608390 | None:intergenic | 30.0% |
| !!! | GGCTTATTACTTTTAGAATC+TGG | - | chr3.1:45609408-45609427 | MS.gene84510:intron | 30.0% |
| !!! | GTTTTACTTGGAACTTGTTA+GGG | - | chr3.1:45606759-45606778 | MS.gene84510:intron | 30.0% |
| AAGCGTCAAAAAGTAGAGTT+AGG | + | chr3.1:45609549-45609568 | None:intergenic | 35.0% | |
| AAGTTACACTTACATGTTGC+AGG | - | chr3.1:45607235-45607254 | MS.gene84510:intron | 35.0% | |
| AGAAAATGGAACAACTGCTA+CGG | - | chr3.1:45608109-45608128 | MS.gene84510:CDS | 35.0% | |
| AGGTACAATTGCATTCTTTG+TGG | - | chr3.1:45610083-45610102 | MS.gene84510:CDS | 35.0% | |
| ATTGCTTACCATGCAAAAGT+TGG | + | chr3.1:45609137-45609156 | None:intergenic | 35.0% | |
| GAAAAGAGAATCAGTTCTGT+AGG | - | chr3.1:45607418-45607437 | MS.gene84510:intron | 35.0% | |
| GATTAAGTATTCCAGCCTTA+CGG | - | chr3.1:45607665-45607684 | MS.gene84510:intron | 35.0% | |
| GTTGCTAAATAAACCATTGC+CGG | + | chr3.1:45605844-45605863 | None:intergenic | 35.0% | |
| TAAGATGATCTTTGTTCACG+AGG | - | chr3.1:45609644-45609663 | MS.gene84510:CDS | 35.0% | |
| TAGTCATCATGTGTGTTATG+TGG | - | chr3.1:45605902-45605921 | MS.gene84510:CDS | 35.0% | |
| TCATACAACGTAAGCATACT+GGG | + | chr3.1:45607082-45607101 | None:intergenic | 35.0% | |
| TCTAATAATGCTGAGCTTGA+TGG | - | chr3.1:45609887-45609906 | MS.gene84510:CDS | 35.0% | |
| TGAGATGTAAGGGAATTGTT+TGG | - | chr3.1:45607606-45607625 | MS.gene84510:intron | 35.0% | |
| TGTTAATCAAGGCTTTGCAT+TGG | - | chr3.1:45606082-45606101 | MS.gene84510:intron | 35.0% | |
| TGTTCCTTTGCACTTAATGA+GGG | - | chr3.1:45607736-45607755 | MS.gene84510:intron | 35.0% | |
| TTCATACAACGTAAGCATAC+TGG | + | chr3.1:45607083-45607102 | None:intergenic | 35.0% | |
| ! | ACAAAGTGCAATAGTTTGTC+AGG | + | chr3.1:45608289-45608308 | None:intergenic | 35.0% |
| ! | ACTACAGAAAAGAGGCATAT+TGG | + | chr3.1:45609168-45609187 | None:intergenic | 35.0% |
| ! | ACTTTTTGACGCTTTGTCAT+GGG | - | chr3.1:45609555-45609574 | MS.gene84510:intron | 35.0% |
| ! | ATGTCACTGACTATTTGAGA+AGG | + | chr3.1:45606313-45606332 | None:intergenic | 35.0% |
| ! | CAGTTGTTCCATTTTCTGAT+GGG | + | chr3.1:45608106-45608125 | None:intergenic | 35.0% |
| ! | CCCTTACAAGTCAATTTTGT+AGG | - | chr3.1:45608556-45608575 | MS.gene84510:intron | 35.0% |
| ! | TGGCTTGTGATAATTTGAGT+CGG | - | chr3.1:45609042-45609061 | MS.gene84510:intron | 35.0% |
| ! | TGTCACTGACTATTTGAGAA+GGG | + | chr3.1:45606312-45606331 | None:intergenic | 35.0% |
| ! | TTAATCTGGAATATCACCCA+GGG | - | chr3.1:45608896-45608915 | MS.gene84510:intron | 35.0% |
| ! | TTTAATCTGGAATATCACCC+AGG | - | chr3.1:45608895-45608914 | MS.gene84510:intron | 35.0% |
| !! | CAAAATTGACTTGTAAGGGA+AGG | + | chr3.1:45608555-45608574 | None:intergenic | 35.0% |
| !! | CGTTTTACTTGGAACTTGTT+AGG | - | chr3.1:45606758-45606777 | MS.gene84510:intron | 35.0% |
| !! | TACTTTTTGACGCTTTGTCA+TGG | - | chr3.1:45609554-45609573 | MS.gene84510:intron | 35.0% |
| !! | TAGCCTAATGATTCTAGGAT+AGG | + | chr3.1:45608623-45608642 | None:intergenic | 35.0% |
| AAAATGGAACAACTGCTACG+GGG | - | chr3.1:45608111-45608130 | MS.gene84510:CDS | 40.0% | |
| AAACCATTGCCGGATAAAAC+TGG | + | chr3.1:45605834-45605853 | None:intergenic | 40.0% | |
| AACCACTGATCTTTGAACTG+GGG | + | chr3.1:45609861-45609880 | None:intergenic | 40.0% | |
| AACTTGAGACAACACAGACA+CGG | + | chr3.1:45606148-45606167 | None:intergenic | 40.0% | |
| AAGTGATCTTACGATAACGC+AGG | + | chr3.1:45607808-45607827 | None:intergenic | 40.0% | |
| AATGCAATTGTACCTCGTTC+TGG | + | chr3.1:45610078-45610097 | None:intergenic | 40.0% | |
| ACATGTTGCAGGTAAGTTCA+TGG | - | chr3.1:45607246-45607265 | MS.gene84510:intron | 40.0% | |
| ACCATGCAAAAGTTGGAGAA+GGG | + | chr3.1:45609130-45609149 | None:intergenic | 40.0% | |
| ACTAACCTCGAAAGAGAACA+GGG | - | chr3.1:45608976-45608995 | MS.gene84510:intron | 40.0% | |
| ACTCACGAATTAAGCTCTTC+AGG | + | chr3.1:45607863-45607882 | None:intergenic | 40.0% | |
| ACTGCAAAGAAGCTTCTATG+CGG | - | chr3.1:45608002-45608021 | MS.gene84510:intron | 40.0% | |
| AGCAACTTCCAAGATCAGTT+TGG | - | chr3.1:45605858-45605877 | MS.gene84510:CDS | 40.0% | |
| AGGGAATAATACTCAGACAC+AGG | + | chr3.1:45606845-45606864 | None:intergenic | 40.0% | |
| AGGTAAAGACAAAAGCCGTA+AGG | + | chr3.1:45607683-45607702 | None:intergenic | 40.0% | |
| ATGATGACTAGAGCCATGTT+GGG | + | chr3.1:45605892-45605911 | None:intergenic | 40.0% | |
| CTATGTCAGTGACATGCTTA+TGG | - | chr3.1:45606705-45606724 | MS.gene84510:intron | 40.0% | |
| CTCACGAATTAAGCTCTTCA+GGG | + | chr3.1:45607862-45607881 | None:intergenic | 40.0% | |
| CTCTATTACATTCCTTGCCA+TGG | - | chr3.1:45606047-45606066 | MS.gene84510:CDS | 40.0% | |
| CTCTTCAAGCAGTAATCAGA+AGG | + | chr3.1:45609356-45609375 | None:intergenic | 40.0% | |
| CTTCTGATTACTGCTTGAAG+AGG | - | chr3.1:45609354-45609373 | MS.gene84510:intron | 40.0% | |
| GAAAATGGAACAACTGCTAC+GGG | - | chr3.1:45608110-45608129 | MS.gene84510:CDS | 40.0% | |
| GAACCACTGATCTTTGAACT+GGG | + | chr3.1:45609862-45609881 | None:intergenic | 40.0% | |
| GAGCCTATCCTAGAATCATT+AGG | - | chr3.1:45608617-45608636 | MS.gene84510:intron | 40.0% | |
| GGAATGATACCCTTGAAGAT+AGG | - | chr3.1:45607396-45607415 | MS.gene84510:intron | 40.0% | |
| GGTTGCATTTAAAAAGCCAG+TGG | - | chr3.1:45607267-45607286 | MS.gene84510:intron | 40.0% | |
| GTGTTCCTTTGCACTTAATG+AGG | - | chr3.1:45607735-45607754 | MS.gene84510:intron | 40.0% | |
| GTTGCTTAACTTCTGTGTTG+AGG | - | chr3.1:45608466-45608485 | MS.gene84510:intron | 40.0% | |
| TAAAATAGCAGGCCACTGTT+TGG | + | chr3.1:45608329-45608348 | None:intergenic | 40.0% | |
| TACATTCCTTGCCATGGTTA+CGG | - | chr3.1:45606053-45606072 | MS.gene84510:CDS | 40.0% | |
| TACCATGCAAAAGTTGGAGA+AGG | + | chr3.1:45609131-45609150 | None:intergenic | 40.0% | |
| TACGGCACTCTTGTTAATCA+AGG | - | chr3.1:45606071-45606090 | MS.gene84510:intron | 40.0% | |
| TACTAACCTCGAAAGAGAAC+AGG | - | chr3.1:45608975-45608994 | MS.gene84510:intron | 40.0% | |
| TATTTGAGAAGGGGGGAAAA+AGG | + | chr3.1:45606302-45606321 | None:intergenic | 40.0% | |
| TCAAACAAAACTCCAGAACG+AGG | - | chr3.1:45610063-45610082 | MS.gene84510:CDS | 40.0% | |
| TCACGAATTAAGCTCTTCAG+GGG | + | chr3.1:45607861-45607880 | None:intergenic | 40.0% | |
| TCCAAGTAAAACGTGAAGAC+TGG | + | chr3.1:45606751-45606770 | None:intergenic | 40.0% | |
| TGAACCACTGATCTTTGAAC+TGG | + | chr3.1:45609863-45609882 | None:intergenic | 40.0% | |
| ! | AATCAAGGCTTTGCATTGGT+TGG | - | chr3.1:45606086-45606105 | MS.gene84510:intron | 40.0% |
| ! | ACCAGTCTTCACGTTTTACT+TGG | - | chr3.1:45606747-45606766 | MS.gene84510:intron | 40.0% |
| ! | GAGCGATTCTATCTAGAATG+AGG | - | chr3.1:45609387-45609406 | MS.gene84510:intron | 40.0% |
| ! | GATTAGTCCTGCTGTACTAA+GGG | + | chr3.1:45607143-45607162 | None:intergenic | 40.0% |
| ! | GCAGTTGTTCCATTTTCTGA+TGG | + | chr3.1:45608107-45608126 | None:intergenic | 40.0% |
| ! | GTCACTGACTATTTGAGAAG+GGG | + | chr3.1:45606311-45606330 | None:intergenic | 40.0% |
| ! | GTCTGATTTGATGCTTTCTG+TGG | - | chr3.1:45606505-45606524 | MS.gene84510:intron | 40.0% |
| ! | TCACTGACTATTTGAGAAGG+GGG | + | chr3.1:45606310-45606329 | None:intergenic | 40.0% |
| ! | TGATTAGTCCTGCTGTACTA+AGG | + | chr3.1:45607144-45607163 | None:intergenic | 40.0% |
| !! | AAGAAGCACCAAACTGATCT+TGG | + | chr3.1:45605869-45605888 | None:intergenic | 40.0% |
| AAAGACAAAAGCCGTAAGGC+TGG | + | chr3.1:45607679-45607698 | None:intergenic | 45.0% | |
| AAAGCAGACGTATCAAAGCC+AGG | + | chr3.1:45607511-45607530 | None:intergenic | 45.0% | |
| AAATGGAACAACTGCTACGG+GGG | - | chr3.1:45608112-45608131 | MS.gene84510:CDS | 45.0% | |
| AAGCGCCATCAAGAAGAAGA+AGG | + | chr3.1:45606193-45606212 | None:intergenic | 45.0% | |
| ACATCTCTAACCTTACGAGC+TGG | - | chr3.1:45608759-45608778 | MS.gene84510:intron | 45.0% | |
| ACCACTGATCTTTGAACTGG+GGG | + | chr3.1:45609860-45609879 | None:intergenic | 45.0% | |
| ACGGGTAGCCTAATGATTCT+AGG | + | chr3.1:45608628-45608647 | None:intergenic | 45.0% | |
| AGAGGCTTAATGAGCAAGCA+TGG | - | chr3.1:45605974-45605993 | MS.gene84510:CDS | 45.0% | |
| AGCTCACATGACTTATGGAG+AGG | - | chr3.1:45610024-45610043 | MS.gene84510:CDS | 45.0% | |
| AGCTCCCTCATTAAGTGCAA+AGG | + | chr3.1:45607743-45607762 | None:intergenic | 45.0% | |
| AGTGTGAGCCAAATGACTAC+GGG | + | chr3.1:45608646-45608665 | None:intergenic | 45.0% | |
| ATCAAGTGCCACATTGCTCA+GGG | - | chr3.1:45606956-45606975 | MS.gene84510:intron | 45.0% | |
| ATGCATTCATTGGTCCACCA+GGG | + | chr3.1:45609955-45609974 | None:intergenic | 45.0% | |
| ATGTTCATTGCCTCCGATCA+TGG | - | chr3.1:45608036-45608055 | MS.gene84510:intron | 45.0% | |
| CAAAAGCAGTTTGTGATCCC+TGG | - | chr3.1:45609935-45609954 | MS.gene84510:CDS | 45.0% | |
| CATGATGACTAGAGCCATGT+TGG | + | chr3.1:45605893-45605912 | None:intergenic | 45.0% | |
| CATGCAGCTCACATGACTTA+TGG | - | chr3.1:45610019-45610038 | MS.gene84510:CDS | 45.0% | |
| CGTAAGGTTAGAGATGTCCA+CGG | + | chr3.1:45608756-45608775 | None:intergenic | 45.0% | |
| CTAACCTCGAAAGAGAACAG+GGG | - | chr3.1:45608977-45608996 | MS.gene84510:intron | 45.0% | |
| CTCATTAAGCCTCTCAACCT+CGG | + | chr3.1:45605968-45605987 | None:intergenic | 45.0% | |
| CTGGTTGTCCCATCAGAAAA+TGG | - | chr3.1:45608095-45608114 | MS.gene84510:CDS | 45.0% | |
| CTTAATGAGGGAGCTATACG+AGG | - | chr3.1:45607748-45607767 | MS.gene84510:CDS | 45.0% | |
| GAGTGTGAGCCAAATGACTA+CGG | + | chr3.1:45608647-45608666 | None:intergenic | 45.0% | |
| GCATTTACTAGCAACCAAGC+AGG | - | chr3.1:45606232-45606251 | MS.gene84510:intron | 45.0% | |
| GCTCACATGACTTATGGAGA+GGG | - | chr3.1:45610025-45610044 | MS.gene84510:CDS | 45.0% | |
| GCTTAATGAGCAAGCATGGA+GGG | - | chr3.1:45605978-45605997 | MS.gene84510:CDS | 45.0% | |
| GGGTTCCTTCTTCTTCTTGA+TGG | - | chr3.1:45606185-45606204 | MS.gene84510:intron | 45.0% | |
| GTAGACGAGGATGCATTCAT+TGG | + | chr3.1:45609965-45609984 | None:intergenic | 45.0% | |
| GTCAGTGACATGCTTATGGA+GGG | - | chr3.1:45606709-45606728 | MS.gene84510:intron | 45.0% | |
| TCAGTGACATGCTTATGGAG+GGG | - | chr3.1:45606710-45606729 | MS.gene84510:intron | 45.0% | |
| TGAAGTTCCCTTAGTACAGC+AGG | - | chr3.1:45607133-45607152 | MS.gene84510:intron | 45.0% | |
| TGAGCTGCATGTGTTTGAGA+TGG | + | chr3.1:45610010-45610029 | None:intergenic | 45.0% | |
| TGTCAGTGACATGCTTATGG+AGG | - | chr3.1:45606708-45606727 | MS.gene84510:intron | 45.0% | |
| TTAGGCTACCCGTAGTCATT+TGG | - | chr3.1:45608635-45608654 | MS.gene84510:intron | 45.0% | |
| ! | AAGCCAGTGGCATGCTTTTA+TGG | - | chr3.1:45607280-45607299 | MS.gene84510:intron | 45.0% |
| ! | ACCCTTCTCCAACTTTTGCA+TGG | - | chr3.1:45609126-45609145 | MS.gene84510:CDS | 45.0% |
| ! | AGCCAGTGGCATGCTTTTAT+GGG | - | chr3.1:45607281-45607300 | MS.gene84510:intron | 45.0% |
| ! | CACTGACTATTTGAGAAGGG+GGG | + | chr3.1:45606309-45606328 | None:intergenic | 45.0% |
| ! | TGGAAAAGGTGGGTTCAAAG+TGG | - | chr3.1:45609233-45609252 | MS.gene84510:CDS | 45.0% |
| !! | AGACCAGTTTTATCCGGCAA+TGG | - | chr3.1:45605828-45605847 | MS.gene84510:CDS | 45.0% |
| !! | CAGCAGAGACCAGTTTTATC+CGG | - | chr3.1:45605822-45605841 | MS.gene84510:CDS | 45.0% |
| !! | GGGTTCAAAGTGGATTGTAC+TGG | - | chr3.1:45609243-45609262 | MS.gene84510:CDS | 45.0% |
| !! | TAACAAGAGTGCCGTAACCA+TGG | + | chr3.1:45606067-45606086 | None:intergenic | 45.0% |
| !! | TAATCAAGCCTTGTTCTCGC+TGG | + | chr3.1:45608922-45608941 | None:intergenic | 45.0% |
| !! | TTTGGTGCTTCTTCCCAACA+TGG | - | chr3.1:45605876-45605895 | MS.gene84510:CDS | 45.0% |
| !! | TTTTGTTTGAGCTCCCAGCT+GGG | + | chr3.1:45610053-45610072 | None:intergenic | 45.0% |
| !!! | AACCTTACGAGCTGGTTTTG+TGG | - | chr3.1:45608767-45608786 | MS.gene84510:intron | 45.0% |
| !! | ATTATGAATAAAAAAATTAA+CGG | + | chr3.1:45608420-45608439 | None:intergenic | 5.0% |
| AACACACCCCATCACAACCA+AGG | + | chr3.1:45608686-45608705 | None:intergenic | 50.0% | |
| AAGCAGTTTGTGATCCCTGG+TGG | - | chr3.1:45609938-45609957 | MS.gene84510:CDS | 50.0% | |
| AATCCCTAGTTTAACCCCCC+CGG | - | chr3.1:45609717-45609736 | MS.gene84510:intron | 50.0% | |
| AATGGAACAACTGCTACGGG+GGG | - | chr3.1:45608113-45608132 | MS.gene84510:CDS | 50.0% | |
| ACATGCTTATGGAGGGGCAA+TGG | - | chr3.1:45606716-45606735 | MS.gene84510:intron | 50.0% | |
| ACTAGCAACCAAGCAGGCTT+CGG | - | chr3.1:45606238-45606257 | MS.gene84510:intron | 50.0% | |
| AGCTCAGCTCAAACTGAGGT+TGG | - | chr3.1:45609011-45609030 | MS.gene84510:intron | 50.0% | |
| ATGCGGTTGCAGACATATGC+TGG | - | chr3.1:45605754-45605773 | MS.gene84510:intron | 50.0% | |
| ATGTCCAGCCTTGGTTGTGA+TGG | - | chr3.1:45608675-45608694 | MS.gene84510:intron | 50.0% | |
| CAACTCAAGATGTCCAGCCT+TGG | - | chr3.1:45608666-45608685 | MS.gene84510:intron | 50.0% | |
| CAGTCAGATGCTCATCGACA+AGG | - | chr3.1:45608149-45608168 | MS.gene84510:CDS | 50.0% | |
| CATGCTTATGGAGGGGCAAT+GGG | - | chr3.1:45606717-45606736 | MS.gene84510:intron | 50.0% | |
| CTCAAACTGAGGTTGGCGAT+GGG | - | chr3.1:45609018-45609037 | MS.gene84510:intron | 50.0% | |
| CTCCACAAAACCAGCTCGTA+AGG | + | chr3.1:45608772-45608791 | None:intergenic | 50.0% | |
| CTCTTCACGACAGATGATGC+AGG | + | chr3.1:45607976-45607995 | None:intergenic | 50.0% | |
| GAAGCTTTGCACTGTAGACG+AGG | + | chr3.1:45609978-45609997 | None:intergenic | 50.0% | |
| GATCAAGTGCCACATTGCTC+AGG | - | chr3.1:45606955-45606974 | MS.gene84510:intron | 50.0% | |
| GATGCATTCATTGGTCCACC+AGG | + | chr3.1:45609956-45609975 | None:intergenic | 50.0% | |
| GCTCTTTACCCTGAGCAATG+TGG | + | chr3.1:45606967-45606986 | None:intergenic | 50.0% | |
| GGCTTAATGAGCAAGCATGG+AGG | - | chr3.1:45605977-45605996 | MS.gene84510:CDS | 50.0% | |
| TAATGAGCAAGCATGGAGGG+AGG | - | chr3.1:45605981-45606000 | MS.gene84510:CDS | 50.0% | |
| TAGCAGGCCACTGTTTGGAA+AGG | + | chr3.1:45608324-45608343 | None:intergenic | 50.0% | |
| TCAAACTGAGGTTGGCGATG+GGG | - | chr3.1:45609019-45609038 | MS.gene84510:intron | 50.0% | |
| TCCCCCAGTTCAAAGATCAG+TGG | - | chr3.1:45609856-45609875 | MS.gene84510:CDS | 50.0% | |
| TCTCAAACTTACAGCTCCCC+TGG | - | chr3.1:45609821-45609840 | MS.gene84510:CDS | 50.0% | |
| TGAGACAACACAGACACGGA+AGG | + | chr3.1:45606144-45606163 | None:intergenic | 50.0% | |
| TGGAAGCTCAGCTCAAACTG+AGG | - | chr3.1:45609007-45609026 | MS.gene84510:intron | 50.0% | |
| TGTCCAGCCTTGGTTGTGAT+GGG | - | chr3.1:45608676-45608695 | MS.gene84510:intron | 50.0% | |
| TGTCGATGAGCATCTGACTG+TGG | + | chr3.1:45608149-45608168 | None:intergenic | 50.0% | |
| TTTCCGGGGGGGTTAAACTA+GGG | + | chr3.1:45609723-45609742 | None:intergenic | 50.0% | |
| ! | CACCCATAAAAGCATGCCAC+TGG | + | chr3.1:45607286-45607305 | None:intergenic | 50.0% |
| ! | CAGTGGCATGCTTTTATGGG+TGG | - | chr3.1:45607284-45607303 | MS.gene84510:intron | 50.0% |
| ! | GCTGCATGTGTTTGAGATGG+TGG | + | chr3.1:45610007-45610026 | None:intergenic | 50.0% |
| ! | GGGAGCTATACGAGGCATTT+AGG | - | chr3.1:45607756-45607775 | MS.gene84510:CDS | 50.0% |
| ! | GGGATAAAGAGTGTAGCCAG+GGG | + | chr3.1:45609840-45609859 | None:intergenic | 50.0% |
| ! | GGGGATAAAGAGTGTAGCCA+GGG | + | chr3.1:45609841-45609860 | None:intergenic | 50.0% |
| !! | CAGGGTAAAGAGCACTTTGG+AGG | - | chr3.1:45606974-45606993 | MS.gene84510:intron | 50.0% |
| !! | CTGCTTTTGTGCTTGCTCAC+TGG | + | chr3.1:45609924-45609943 | None:intergenic | 50.0% |
| !! | GCTCAGGGTAAAGAGCACTT+TGG | - | chr3.1:45606971-45606990 | MS.gene84510:intron | 50.0% |
| !!! | GTTTTGTTTGAGCTCCCAGC+TGG | + | chr3.1:45610054-45610073 | None:intergenic | 50.0% |
| ACAACCAGTGCTCTGCAGGT+AGG | + | chr3.1:45608083-45608102 | None:intergenic | 55.0% | |
| AGCTCTTCAGGGGTTGCATC+TGG | + | chr3.1:45607851-45607870 | None:intergenic | 55.0% | |
| CAACCAGTGCTCTGCAGGTA+GGG | + | chr3.1:45608082-45608101 | None:intergenic | 55.0% | |
| CCTCGAAAGAGAACAGGGGA+AGG | - | chr3.1:45608981-45609000 | MS.gene84510:intron | 55.0% | |
| CCTTCCCCTGTTCTCTTTCG+AGG | + | chr3.1:45608984-45609003 | None:intergenic | 55.0% | |
| CGGTGCACCTTTCCAAACAG+TGG | - | chr3.1:45608314-45608333 | MS.gene84510:intron | 55.0% | |
| GATCGAAACCGAAGCCTGCT+TGG | + | chr3.1:45606249-45606268 | None:intergenic | 55.0% | |
| GCAAGCATGGAGGGAGGTTA+TGG | - | chr3.1:45605987-45606006 | MS.gene84510:CDS | 55.0% | |
| GCTCAAACTGAGGTTGGCGA+TGG | - | chr3.1:45609017-45609036 | MS.gene84510:intron | 55.0% | |
| GTCCAGCCTTGGTTGTGATG+GGG | - | chr3.1:45608677-45608696 | MS.gene84510:intron | 55.0% | |
| GTTTCCGGGGGGGTTAAACT+AGG | + | chr3.1:45609724-45609743 | None:intergenic | 55.0% | |
| TATGGAGAGGGATCCCAGCT+GGG | - | chr3.1:45610037-45610056 | MS.gene84510:CDS | 55.0% | |
| TGGTTCTCTTCGAGAAGCCG+AGG | - | chr3.1:45605948-45605967 | MS.gene84510:CDS | 55.0% | |
| TTATGGAGAGGGATCCCAGC+TGG | - | chr3.1:45610036-45610055 | MS.gene84510:CDS | 55.0% | |
| TTCGAGAAGCCGAGGTTGAG+AGG | - | chr3.1:45605956-45605975 | MS.gene84510:CDS | 55.0% | |
| ! | AAGAGAACAGGGGAAGGCAC+TGG | - | chr3.1:45608987-45609006 | MS.gene84510:intron | 55.0% |
| ! | GGGGGATAAAGAGTGTAGCC+AGG | + | chr3.1:45609842-45609861 | None:intergenic | 55.0% |
| !! | AGAGTGCCGTAACCATGGCA+AGG | + | chr3.1:45606062-45606081 | None:intergenic | 55.0% |
| AACTGAGGTTGGCGATGGGG+TGG | - | chr3.1:45609022-45609041 | MS.gene84510:intron | 60.0% | |
| CACCCCATCACAACCAAGGC+TGG | + | chr3.1:45608682-45608701 | None:intergenic | 60.0% | |
| GCCTCCGATCATGGCTAGAG+CGG | - | chr3.1:45608045-45608064 | MS.gene84510:CDS | 60.0% | |
| GCTGCCGCTCTAGCCATGAT+CGG | + | chr3.1:45608052-45608071 | None:intergenic | 60.0% | |
| TGGGACAACCAGTGCTCTGC+AGG | + | chr3.1:45608087-45608106 | None:intergenic | 60.0% | |
| TTGCCCTACCTGCAGAGCAC+TGG | - | chr3.1:45608076-45608095 | MS.gene84510:CDS | 60.0% | |
| ACCCAGGGCCAGCGAGAACA+AGG | - | chr3.1:45608911-45608930 | MS.gene84510:intron | 65.0% | |
| GCCGCTCTAGCCATGATCGG+AGG | + | chr3.1:45608049-45608068 | None:intergenic | 65.0% | |
| ! | GCCTTGTTCTCGCTGGCCCT+GGG | + | chr3.1:45608915-45608934 | None:intergenic | 65.0% |
| !! | AGCCTTGTTCTCGCTGGCCC+TGG | + | chr3.1:45608916-45608935 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 45605751 | 45610167 | 45605751 | ID=MS.gene84510 |
| chr3.1 | mRNA | 45605751 | 45610167 | 45605751 | ID=MS.gene84510.t1;Parent=MS.gene84510 |
| chr3.1 | exon | 45609770 | 45610167 | 45609770 | ID=MS.gene84510.t1.exon1;Parent=MS.gene84510.t1 |
| chr3.1 | CDS | 45609770 | 45610167 | 45609770 | ID=cds.MS.gene84510.t1;Parent=MS.gene84510.t1 |
| chr3.1 | exon | 45609636 | 45609695 | 45609636 | ID=MS.gene84510.t1.exon2;Parent=MS.gene84510.t1 |
| chr3.1 | CDS | 45609636 | 45609695 | 45609636 | ID=cds.MS.gene84510.t1;Parent=MS.gene84510.t1 |
| chr3.1 | exon | 45609088 | 45609264 | 45609088 | ID=MS.gene84510.t1.exon3;Parent=MS.gene84510.t1 |
| chr3.1 | CDS | 45609088 | 45609264 | 45609088 | ID=cds.MS.gene84510.t1;Parent=MS.gene84510.t1 |
| chr3.1 | exon | 45608042 | 45608191 | 45608042 | ID=MS.gene84510.t1.exon4;Parent=MS.gene84510.t1 |
| chr3.1 | CDS | 45608042 | 45608191 | 45608042 | ID=cds.MS.gene84510.t1;Parent=MS.gene84510.t1 |
| chr3.1 | exon | 45607748 | 45607956 | 45607748 | ID=MS.gene84510.t1.exon5;Parent=MS.gene84510.t1 |
| chr3.1 | CDS | 45607748 | 45607956 | 45607748 | ID=cds.MS.gene84510.t1;Parent=MS.gene84510.t1 |
| chr3.1 | exon | 45606771 | 45606921 | 45606771 | ID=MS.gene84510.t1.exon6;Parent=MS.gene84510.t1 |
| chr3.1 | CDS | 45606771 | 45606921 | 45606771 | ID=cds.MS.gene84510.t1;Parent=MS.gene84510.t1 |
| chr3.1 | exon | 45605811 | 45606083 | 45605811 | ID=MS.gene84510.t1.exon7;Parent=MS.gene84510.t1 |
| chr3.1 | CDS | 45605811 | 45606083 | 45605811 | ID=cds.MS.gene84510.t1;Parent=MS.gene84510.t1 |
| chr3.1 | exon | 45605751 | 45605754 | 45605751 | ID=MS.gene84510.t1.exon8;Parent=MS.gene84510.t1 |
| chr3.1 | CDS | 45605751 | 45605754 | 45605751 | ID=cds.MS.gene84510.t1;Parent=MS.gene84510.t1 |
| Gene Sequence |
| Protein sequence |
