Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84797.t1 | XP_013452118.1 | 96.2 | 761 | 25 | 2 | 1 | 757 | 1 | 761 | 0.00E+00 | 1384 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84797.t1 | F4I4B6 | 64.4 | 753 | 248 | 8 | 12 | 755 | 6 | 747 | 2.9e-254 | 879.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84797.t1 | A0A072U9N7 | 96.2 | 761 | 25 | 2 | 1 | 757 | 1 | 761 | 0.0e+00 | 1384.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene84797 | MS.gene006890 | PPI |
| MS.gene84797 | MS.gene56433 | PPI |
| MS.gene84797 | MS.gene059433 | PPI |
| MS.gene067568 | MS.gene84797 | PPI |
| MS.gene84797 | MS.gene059432 | PPI |
| MS.gene84797 | MS.gene006891 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84797.t1 | MTR_6g045363 | 96.189 | 761 | 25 | 2 | 1 | 757 | 1 | 761 | 0.0 | 1493 |
| MS.gene84797.t1 | MTR_1g111120 | 88.477 | 755 | 81 | 3 | 3 | 752 | 1 | 754 | 0.0 | 1315 |
| MS.gene84797.t1 | MTR_4g005930 | 56.746 | 756 | 304 | 12 | 14 | 757 | 8 | 752 | 0.0 | 760 |
| MS.gene84797.t1 | MTR_4g083940 | 35.165 | 728 | 429 | 18 | 45 | 747 | 18 | 727 | 3.14e-115 | 366 |
| MS.gene84797.t1 | MTR_1g069620 | 24.933 | 750 | 497 | 16 | 11 | 735 | 21 | 729 | 2.17e-47 | 181 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84797.t1 | AT1G10385 | 63.984 | 758 | 243 | 9 | 12 | 755 | 6 | 747 | 0.0 | 927 |
| MS.gene84797.t1 | AT5G49830 | 56.038 | 737 | 298 | 12 | 26 | 752 | 15 | 735 | 0.0 | 738 |
| MS.gene84797.t1 | AT5G49830 | 53.906 | 768 | 297 | 13 | 26 | 752 | 15 | 766 | 0.0 | 723 |
| MS.gene84797.t1 | AT5G49830 | 56.250 | 704 | 285 | 9 | 58 | 752 | 108 | 797 | 0.0 | 712 |
| MS.gene84797.t1 | AT1G10180 | 33.705 | 718 | 419 | 17 | 45 | 737 | 18 | 703 | 8.09e-111 | 354 |
Find 130 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGAATTCTCAAATGTATT+TGG | 0.109776 | 6.3:-49471703 | MS.gene84797:CDS |
| ATAATTTGTGCAGCTTTATT+TGG | 0.153853 | 6.3:-49470528 | MS.gene84797:intron |
| ATGCAGCTTGGTTGGATAAA+AGG | 0.227929 | 6.3:+49473856 | None:intergenic |
| TTTCTGATGACCAAGCCTTT+TGG | 0.263542 | 6.3:-49471199 | MS.gene84797:CDS |
| CTCATTCATGCTACGAGATT+TGG | 0.267618 | 6.3:+49475619 | None:intergenic |
| TTCTGCTGATGATTGGTTGC+TGG | 0.277764 | 6.3:-49473004 | MS.gene84797:CDS |
| ATTGCTATAAAGATGTTAAC+TGG | 0.301872 | 6.3:-49469817 | MS.gene84797:CDS |
| TTCTTCAGTTCACGCTGTTC+CGG | 0.308671 | 6.3:+49471816 | None:intergenic |
| CTTTAGCTTCTGCTGATGAT+TGG | 0.309010 | 6.3:-49473011 | MS.gene84797:CDS |
| TATGTCCGAATCTTCGTTTC+CGG | 0.317633 | 6.3:+49473788 | None:intergenic |
| AGACCTGAATGGTTTCCTTC+TGG | 0.322733 | 6.3:-49471660 | MS.gene84797:CDS |
| ATTGATGCTGTTGCTGCTAC+AGG | 0.334893 | 6.3:-49470416 | MS.gene84797:CDS |
| GTGAATTCTCAAATGTATTT+GGG | 0.341029 | 6.3:-49471702 | MS.gene84797:CDS |
| ATCTCCGCGCGGCGAGTTGA+TGG | 0.344763 | 6.3:+49473510 | None:intergenic |
| CTTATCACTGAGAGTGAGAT+TGG | 0.350371 | 6.3:+49475691 | None:intergenic |
| AACCAAGCTGCATTGGTTCA+TGG | 0.370121 | 6.3:-49473846 | MS.gene84797:CDS |
| GACATTGAAAGAACTCCTTT+AGG | 0.380183 | 6.3:-49471173 | MS.gene84797:CDS |
| ATTCCAGAAGGAAACCATTC+AGG | 0.389508 | 6.3:+49471657 | None:intergenic |
| CAAATTCAACTCAATGGTTC+AGG | 0.391880 | 6.3:-49472881 | MS.gene84797:intron |
| TCACTCTCAGTGATAAGCTT+AGG | 0.406393 | 6.3:-49475685 | MS.gene84797:CDS |
| AGGTCCTCTTGGCCTTCAAC+AGG | 0.416523 | 6.3:-49471153 | MS.gene84797:intron |
| TCCACTTGAAATCCTACAAT+TGG | 0.420645 | 6.3:-49472111 | MS.gene84797:CDS |
| CACTCTCAGTGATAAGCTTA+GGG | 0.423280 | 6.3:-49475684 | MS.gene84797:CDS |
| ATTTGGGTATGGAGGAGAAA+GGG | 0.435406 | 6.3:-49471686 | MS.gene84797:CDS |
| TTACAGAAACAGTCATACTA+TGG | 0.437256 | 6.3:-49471223 | MS.gene84797:CDS |
| GTGCAAGTCGATCCAATTGT+AGG | 0.440196 | 6.3:+49472099 | None:intergenic |
| TGAAGTGCTTGAAACAAACT+TGG | 0.441589 | 6.3:+49473594 | None:intergenic |
| TTCTCAAATGTATTTGGGTA+TGG | 0.441886 | 6.3:-49471697 | MS.gene84797:CDS |
| ACTACTAGGAAAAGCAATAC+TGG | 0.442061 | 6.3:-49472970 | MS.gene84797:CDS |
| TGGTTATGCGTGGGCTGATC+CGG | 0.444147 | 6.3:+49469750 | None:intergenic |
| GTTGGATAAAAGGTTTCTCA+TGG | 0.445565 | 6.3:+49473866 | None:intergenic |
| TTATCTTGTTGAACTTAAGA+AGG | 0.449932 | 6.3:-49474615 | MS.gene84797:CDS |
| TGGCTTATGCACCAACTACT+AGG | 0.451092 | 6.3:-49472984 | MS.gene84797:CDS |
| AAACTTTCACATAGCACAAA+AGG | 0.453898 | 6.3:-49471882 | MS.gene84797:CDS |
| TTCAAGATCTGAAATCTCTC+TGG | 0.457261 | 6.3:+49473902 | None:intergenic |
| TTGGATCGACTTGCACTAGA+AGG | 0.457443 | 6.3:-49472092 | MS.gene84797:CDS |
| AGGGTGTCAACTTGGTTCCT+TGG | 0.459354 | 6.3:-49473814 | MS.gene84797:CDS |
| CTCGCCTCCATAGCTGCATC+AGG | 0.461895 | 6.3:-49473198 | MS.gene84797:CDS |
| TATGCGTGGGCTGATCCGGT+GGG | 0.472394 | 6.3:+49469754 | None:intergenic |
| CTTGATGAAACTGATCCTCT+TGG | 0.473506 | 6.3:+49475740 | None:intergenic |
| TTTGGAAGCAACATAGGCAT+TGG | 0.477408 | 6.3:+49475637 | None:intergenic |
| TCTCAGCTAATAGAACATCA+AGG | 0.478648 | 6.3:+49473697 | None:intergenic |
| TCTTTCAATGTCATCCCAAA+AGG | 0.478729 | 6.3:+49471184 | None:intergenic |
| AGAACTCCTTTAGGTCCTCT+TGG | 0.479387 | 6.3:-49471164 | MS.gene84797:CDS |
| TTGGAAGCAACATAGGCATT+GGG | 0.482109 | 6.3:+49475638 | None:intergenic |
| TTTATCCAACCAAGCTGCAT+TGG | 0.482858 | 6.3:-49473853 | MS.gene84797:CDS |
| CAATGTCATCCCAAAAGGCT+TGG | 0.489537 | 6.3:+49471189 | None:intergenic |
| CTACAGGGCTAGATCCCAAC+AGG | 0.491377 | 6.3:-49470400 | MS.gene84797:intron |
| TGCTCACAAATTCAACTCAA+TGG | 0.494222 | 6.3:-49472887 | MS.gene84797:CDS |
| ATACATCTGAGCTAGTAACT+TGG | 0.498432 | 6.3:-49473269 | MS.gene84797:CDS |
| CAACTTGGTTCCTTGGTGAC+CGG | 0.498514 | 6.3:-49473807 | MS.gene84797:CDS |
| TATTGCATCAGATGTATTTG+TGG | 0.499043 | 6.3:-49471282 | MS.gene84797:CDS |
| TTGGTTCATGGTTTAGCAGA+AGG | 0.500660 | 6.3:-49473834 | MS.gene84797:CDS |
| AGATCAAATCAAAATGTCAA+TGG | 0.501515 | 6.3:-49475783 | None:intergenic |
| TCAACAAACCACTCATCCTC+TGG | 0.505796 | 6.3:+49469850 | None:intergenic |
| ATCTGACGTTGCTTGCGAAA+TGG | 0.507358 | 6.3:+49473326 | None:intergenic |
| AAGACCTCCTGATGCAGCTA+TGG | 0.508161 | 6.3:+49473191 | None:intergenic |
| TACGTATATACATACCTGTT+GGG | 0.508559 | 6.3:+49470386 | None:intergenic |
| TAATAGCTTGATGCAAATGA+CGG | 0.509688 | 6.3:+49470459 | None:intergenic |
| ATGAACCAATGCAGCTTGGT+TGG | 0.513222 | 6.3:+49473848 | None:intergenic |
| ACGGGATAAGTAACGACCTT+GGG | 0.514516 | 6.3:+49470478 | None:intergenic |
| ATGGCAAAAGAAATTACAAA+AGG | 0.515453 | 6.3:-49473630 | MS.gene84797:CDS |
| CTAATTACTCTGCCTTCATA+CGG | 0.517767 | 6.3:-49474559 | MS.gene84797:intron |
| GAAAAGAGTCGAAGAATCAA+TGG | 0.518021 | 6.3:-49473676 | MS.gene84797:CDS |
| ATTGCATCAGATGTATTTGT+GGG | 0.518591 | 6.3:-49471281 | MS.gene84797:CDS |
| TGAGCACTGATTGAAAGCTT+AGG | 0.519082 | 6.3:+49472904 | None:intergenic |
| TTATGCGTGGGCTGATCCGG+TGG | 0.519505 | 6.3:+49469753 | None:intergenic |
| TCAATGGCTGCTTTAGAAGA+AGG | 0.521248 | 6.3:-49473660 | MS.gene84797:CDS |
| TTCTCAGTGACAGCTGAACC+TGG | 0.521769 | 6.3:+49472020 | None:intergenic |
| TTTGGGTATGGAGGAGAAAG+GGG | 0.523161 | 6.3:-49471685 | MS.gene84797:CDS |
| GGATCAGTTTCATCAAGCAT+TGG | 0.525391 | 6.3:-49475734 | MS.gene84797:CDS |
| CTCAGCTAATAGAACATCAA+GGG | 0.528051 | 6.3:+49473698 | None:intergenic |
| ACGAGATTTGGAAGCAACAT+AGG | 0.528865 | 6.3:+49475631 | None:intergenic |
| ATCAGATGTATTTGTGGGAA+GGG | 0.529411 | 6.3:-49471276 | MS.gene84797:CDS |
| AATAGCTTGATGCAAATGAC+GGG | 0.529864 | 6.3:+49470460 | None:intergenic |
| ATGTATTTGTGGGAAGGGAA+AGG | 0.531950 | 6.3:-49471271 | MS.gene84797:CDS |
| GGTGACCGGAAACGAAGATT+CGG | 0.536915 | 6.3:-49473793 | MS.gene84797:CDS |
| ACTAGCTCAGATGTATATGC+AGG | 0.540210 | 6.3:+49473276 | None:intergenic |
| AGTAACACTCTACCTGTTGA+AGG | 0.541097 | 6.3:+49471141 | None:intergenic |
| GTAAGTGCTTGCTCAACAAA+TGG | 0.544583 | 6.3:+49473069 | None:intergenic |
| TGACATAGAAATTGAACACT+TGG | 0.545816 | 6.3:+49472063 | None:intergenic |
| TGGTTCATGGTTTAGCAGAA+GGG | 0.546446 | 6.3:-49473833 | MS.gene84797:CDS |
| CATCAGATGTATTTGTGGGA+AGG | 0.550806 | 6.3:-49471277 | MS.gene84797:CDS |
| AGAGAGATTTCAGATCTTGA+AGG | 0.551433 | 6.3:-49473900 | MS.gene84797:CDS |
| TACATTTGAGAATTCACAAG+TGG | 0.553060 | 6.3:+49471708 | None:intergenic |
| TTAGCAGAAGGGTGTCAACT+TGG | 0.553191 | 6.3:-49473822 | MS.gene84797:CDS |
| TGATGCAATAGTTGCCACTT+CGG | 0.553746 | 6.3:+49471295 | None:intergenic |
| TACATCTGAGCTAGTAACTT+GGG | 0.556125 | 6.3:-49473268 | MS.gene84797:CDS |
| TTCAGTTCACGCTGTTCCGG+AGG | 0.557140 | 6.3:+49471819 | None:intergenic |
| AACCATGAACCAATGCAGCT+TGG | 0.558664 | 6.3:+49473844 | None:intergenic |
| TTGATGCTGTTGCTGCTACA+GGG | 0.559432 | 6.3:-49470415 | MS.gene84797:CDS |
| TCCAATTGTAGGATTTCAAG+TGG | 0.564153 | 6.3:+49472110 | None:intergenic |
| CTGTTAATAAATGCAATGCC+AGG | 0.567179 | 6.3:-49472038 | MS.gene84797:CDS |
| CACTGATTGAAAGCTTAGGC+TGG | 0.568514 | 6.3:+49472908 | None:intergenic |
| CCGCGCGGCGAGTTGATGGT+TGG | 0.570247 | 6.3:+49473514 | None:intergenic |
| GTAGCATACTCACCGTATGA+AGG | 0.577759 | 6.3:+49474547 | None:intergenic |
| GACGGGATAAGTAACGACCT+TGG | 0.580193 | 6.3:+49470477 | None:intergenic |
| GAAGATGCTTATAGCCCCAC+CGG | 0.580425 | 6.3:-49469769 | MS.gene84797:CDS |
| TCAGACGATCAACTTCGCGC+TGG | 0.582613 | 6.3:+49471787 | None:intergenic |
| GTGTCTTGCCAGAGGATGAG+TGG | 0.583067 | 6.3:-49469858 | MS.gene84797:CDS |
| TGAAGGCCAAGAGGACCTAA+AGG | 0.583411 | 6.3:+49471158 | None:intergenic |
| TTGATGGCATTGGTTATGCG+TGG | 0.584941 | 6.3:+49469740 | None:intergenic |
| CTAAAATGTTTAAGCAACAC+AGG | 0.586893 | 6.3:+49473093 | None:intergenic |
| TCAAATGTATTTGGGTATGG+AGG | 0.587560 | 6.3:-49471694 | MS.gene84797:CDS |
| GATCCTCTTGGAGTCACGAA+TGG | 0.589153 | 6.3:+49475752 | None:intergenic |
| ACCTCCTGATGCAGCTATGG+AGG | 0.589887 | 6.3:+49473194 | None:intergenic |
| AATAAGAAGAAACAGAAGGT+AGG | 0.591901 | 6.3:+49472947 | None:intergenic |
| TGATGGCATTGGTTATGCGT+GGG | 0.591919 | 6.3:+49469741 | None:intergenic |
| AGAAAGGGGAGAGACCTGAA+TGG | 0.592954 | 6.3:-49471671 | MS.gene84797:CDS |
| ATCTTCGTTTCCGGTCACCA+AGG | 0.593631 | 6.3:+49473797 | None:intergenic |
| ATCTTCATCTACATTGTCGA+AGG | 0.597950 | 6.3:+49469786 | None:intergenic |
| GAACTCATCTTCACAGTAGA+CGG | 0.601442 | 6.3:-49471735 | MS.gene84797:CDS |
| AGCCTCTAAAAGATGACAGT+GGG | 0.606484 | 6.3:+49473134 | None:intergenic |
| TATTTGGGTATGGAGGAGAA+AGG | 0.607896 | 6.3:-49471687 | MS.gene84797:CDS |
| AGTAGTAATGTATGAGCTCG+AGG | 0.612329 | 6.3:+49473447 | None:intergenic |
| ACACAACAGATAGCATTGCT+AGG | 0.617403 | 6.3:-49471951 | MS.gene84797:CDS |
| TTGCTATAAAGATGTTAACT+GGG | 0.621722 | 6.3:-49469816 | MS.gene84797:CDS |
| CTAGAATAAGAAGAAACAGA+AGG | 0.625330 | 6.3:+49472943 | None:intergenic |
| ATCTCGTAGCATGAATGAGA+AGG | 0.629372 | 6.3:-49475615 | MS.gene84797:intron |
| GCCTCCATAGCTGCATCAGG+AGG | 0.632896 | 6.3:-49473195 | MS.gene84797:CDS |
| TTACCATTCGTGACTCCAAG+AGG | 0.636630 | 6.3:-49475755 | MS.gene84797:CDS |
| ATGCGTGGGCTGATCCGGTG+GGG | 0.642348 | 6.3:+49469755 | None:intergenic |
| ACTGAGAATCTAGAAAGCAC+AGG | 0.644376 | 6.3:-49472005 | MS.gene84797:CDS |
| TGAATACAGTGTCTTGCCAG+AGG | 0.652440 | 6.3:-49469866 | MS.gene84797:intron |
| TCTACCTGTTGAAGGCCAAG+AGG | 0.664013 | 6.3:+49471149 | None:intergenic |
| TAGCCTCTAAAAGATGACAG+TGG | 0.681162 | 6.3:+49473133 | None:intergenic |
| CCAACCATCAACTCGCCGCG+CGG | 0.686918 | 6.3:-49473514 | MS.gene84797:CDS |
| AGTGTATGCACTAACTGTTG+TGG | 0.728646 | 6.3:+49473377 | None:intergenic |
| GAAAGTTTGATAACAGCACG+CGG | 0.743743 | 6.3:+49471897 | None:intergenic |
| CGGTTGATCGAATCTCCGCG+CGG | 0.810546 | 6.3:+49473499 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATTTGTATAGAAA+TGG | - | chr6.3:49470323-49470342 | MS.gene84797:intron | 10.0% |
| !!! | AAAGTACTATATTATTATTA+TGG | + | chr6.3:49472771-49472790 | None:intergenic | 10.0% |
| !!! | ATAACATAGAATTTTTAATA+GGG | + | chr6.3:49471449-49471468 | None:intergenic | 10.0% |
| !!! | TATAACATAGAATTTTTAAT+AGG | + | chr6.3:49471450-49471469 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAACATGTTCA+TGG | + | chr6.3:49470167-49470186 | None:intergenic | 15.0% |
| !! | TATACTACATAAAATTCAAA+AGG | + | chr6.3:49471155-49471174 | None:intergenic | 15.0% |
| !! | TATATAGGTATTACATAAAA+TGG | + | chr6.3:49473354-49473373 | None:intergenic | 15.0% |
| !! | TATTAAAAACATTATTGGAA+GGG | - | chr6.3:49475082-49475101 | MS.gene84797:intron | 15.0% |
| !!! | AAAAATTAGAATCATGTTTT+AGG | - | chr6.3:49473096-49473115 | MS.gene84797:CDS | 15.0% |
| !!! | AAAAGAAATATAAAGTATTC+AGG | - | chr6.3:49471473-49471492 | MS.gene84797:intron | 15.0% |
| !!! | AACTATAGAGATTAATTTTT+TGG | - | chr6.3:49470219-49470238 | MS.gene84797:intron | 15.0% |
| !!! | TTCTATACAAATTTTATTTG+TGG | + | chr6.3:49470322-49470341 | None:intergenic | 15.0% |
| !! | AAAAATACTTAGATATGTTC+TGG | - | chr6.3:49474798-49474817 | MS.gene84797:intron | 20.0% |
| !! | AACACTTAAGTATTAAAACA+AGG | - | chr6.3:49474608-49474627 | MS.gene84797:CDS | 20.0% |
| !! | AATGTTATGTAAATATCTTG+CGG | + | chr6.3:49471195-49471214 | None:intergenic | 20.0% |
| !! | ACAATGGTAATAATTTGAAA+AGG | - | chr6.3:49474095-49474114 | MS.gene84797:intron | 20.0% |
| !! | ATATATCCAATACAGAAAAA+TGG | - | chr6.3:49471783-49471802 | MS.gene84797:CDS | 20.0% |
| !! | CAAGCTATTAAAAACATTAT+TGG | - | chr6.3:49475077-49475096 | MS.gene84797:intron | 20.0% |
| !! | CTATTAAAAACATTATTGGA+AGG | - | chr6.3:49475081-49475100 | MS.gene84797:intron | 20.0% |
| !! | GTTTACAAATATATGAAAAC+AGG | + | chr6.3:49475530-49475549 | None:intergenic | 20.0% |
| !! | TAATCAAATGAAAGCAAAAA+GGG | + | chr6.3:49470823-49470842 | None:intergenic | 20.0% |
| !! | TTACATAACATTGGATATAA+TGG | - | chr6.3:49471203-49471222 | MS.gene84797:CDS | 20.0% |
| !! | TTATTCTAGTCAAAAAGTAA+AGG | - | chr6.3:49470493-49470512 | MS.gene84797:CDS | 20.0% |
| !!! | AAACTTAAGTTTTTGTTGTT+TGG | + | chr6.3:49470438-49470457 | None:intergenic | 20.0% |
| !!! | AATTTTTCAGGTAAAAACAA+AGG | - | chr6.3:49473886-49473905 | MS.gene84797:CDS | 20.0% |
| !!! | ACAAAACAACTATTTCTAAA+TGG | - | chr6.3:49474883-49474902 | MS.gene84797:intron | 20.0% |
| !!! | AGACTTTATTTATTTTTCGA+CGG | - | chr6.3:49470078-49470097 | MS.gene84797:intron | 20.0% |
| !!! | ATAATCGAGGTTTTAAATAA+CGG | + | chr6.3:49471548-49471567 | None:intergenic | 20.0% |
| !!! | ATTAATTTTTTGGATTGGTT+AGG | - | chr6.3:49470229-49470248 | MS.gene84797:intron | 20.0% |
| !!! | TAGAGATTAATTTTTTGGAT+TGG | - | chr6.3:49470224-49470243 | MS.gene84797:intron | 20.0% |
| !!! | TATTTTGTAGAAGAAATAAC+AGG | - | chr6.3:49474821-49474840 | MS.gene84797:intron | 20.0% |
| !!! | TTCAATTCTTTTCAAATTTG+TGG | + | chr6.3:49472479-49472498 | None:intergenic | 20.0% |
| ! | AAAAGAAGAAAAAAGCGAAT+TGG | + | chr6.3:49475331-49475350 | None:intergenic | 25.0% |
| ! | AAACCAAAAACAAATGACTA+TGG | + | chr6.3:49474562-49474581 | None:intergenic | 25.0% |
| ! | AATACAGAAAAATGGCTAAT+AGG | - | chr6.3:49471791-49471810 | MS.gene84797:CDS | 25.0% |
| ! | AATAGACAGATTTGATTCTT+TGG | + | chr6.3:49473069-49473088 | None:intergenic | 25.0% |
| ! | AATTAACATGATTGTAATCC+AGG | - | chr6.3:49471279-49471298 | MS.gene84797:CDS | 25.0% |
| ! | ACAATGTTATGTTCATAAGA+AGG | + | chr6.3:49471091-49471110 | None:intergenic | 25.0% |
| ! | AGATTCATCTCTCATATATT+AGG | - | chr6.3:49473033-49473052 | MS.gene84797:CDS | 25.0% |
| ! | AGGTATTACATAAAATGGAA+AGG | + | chr6.3:49473349-49473368 | None:intergenic | 25.0% |
| ! | ATGACCTCAAATTGATAAAA+GGG | - | chr6.3:49470002-49470021 | MS.gene84797:intron | 25.0% |
| ! | ATGGCAAAAGAAATTACAAA+AGG | - | chr6.3:49471893-49471912 | MS.gene84797:CDS | 25.0% |
| ! | ATTCATATTGCATTGTTTAC+AGG | - | chr6.3:49470866-49470885 | MS.gene84797:intron | 25.0% |
| ! | ATTGCTATAAAGATGTTAAC+TGG | - | chr6.3:49475706-49475725 | MS.gene84797:CDS | 25.0% |
| ! | CTAATCAAATGAAAGCAAAA+AGG | + | chr6.3:49470824-49470843 | None:intergenic | 25.0% |
| ! | CTGCATATTATCATAAATAG+AGG | - | chr6.3:49473232-49473251 | MS.gene84797:CDS | 25.0% |
| ! | GAACTTGAAAGAAAAAATAG+TGG | + | chr6.3:49470602-49470621 | None:intergenic | 25.0% |
| ! | GCAAGATATTTACATAACAT+TGG | - | chr6.3:49471194-49471213 | MS.gene84797:CDS | 25.0% |
| ! | GGTATTACATAAAATGGAAA+GGG | + | chr6.3:49473348-49473367 | None:intergenic | 25.0% |
| ! | GTATTACATAAAATGGAAAG+GGG | + | chr6.3:49473347-49473366 | None:intergenic | 25.0% |
| ! | GTGAATAATCATAAGATCTA+AGG | + | chr6.3:49474940-49474959 | None:intergenic | 25.0% |
| ! | GTGAATTCTCAAATGTATTT+GGG | - | chr6.3:49473821-49473840 | MS.gene84797:CDS | 25.0% |
| ! | TATATCCTTTGTGTGAATAT+AGG | - | chr6.3:49473370-49473389 | MS.gene84797:CDS | 25.0% |
| ! | TATCTTAAATTAGAAGCTTC+TGG | - | chr6.3:49475255-49475274 | MS.gene84797:intron | 25.0% |
| ! | TATGATAATATGCAGAAACA+GGG | + | chr6.3:49473227-49473246 | None:intergenic | 25.0% |
| ! | TATTATTATTATGGAGTACG+TGG | + | chr6.3:49472762-49472781 | None:intergenic | 25.0% |
| ! | TATTCACACAAAGGATATAT+AGG | + | chr6.3:49473369-49473388 | None:intergenic | 25.0% |
| ! | TCTTATGCATCATATATGAA+GGG | - | chr6.3:49471009-49471028 | MS.gene84797:intron | 25.0% |
| ! | TGTGAATTCTCAAATGTATT+TGG | - | chr6.3:49473820-49473839 | MS.gene84797:CDS | 25.0% |
| ! | TTATCTTGTTGAACTTAAGA+AGG | - | chr6.3:49470908-49470927 | MS.gene84797:intron | 25.0% |
| ! | TTATGATAATATGCAGAAAC+AGG | + | chr6.3:49473228-49473247 | None:intergenic | 25.0% |
| ! | TTCTTATGCATCATATATGA+AGG | - | chr6.3:49471008-49471027 | MS.gene84797:intron | 25.0% |
| ! | TTGAATATAACTACATGTGT+TGG | + | chr6.3:49472863-49472882 | None:intergenic | 25.0% |
| ! | TTGCTATAAAGATGTTAACT+GGG | - | chr6.3:49475707-49475726 | MS.gene84797:CDS | 25.0% |
| ! | TTTAGAAGAAGGAGAAAAAA+TGG | - | chr6.3:49471874-49471893 | MS.gene84797:CDS | 25.0% |
| !! | AATGTGTTAGATAGTGTTTT+GGG | - | chr6.3:49470787-49470806 | MS.gene84797:intron | 25.0% |
| !! | TCTGAAAGAATACTTTTGAA+CGG | - | chr6.3:49474470-49474489 | MS.gene84797:intron | 25.0% |
| !! | TTTAACATTGCAGCATTTTA+AGG | - | chr6.3:49470278-49470297 | MS.gene84797:intron | 25.0% |
| !! | TTTTATATGTCTACCATATG+TGG | - | chr6.3:49470523-49470542 | MS.gene84797:intron | 25.0% |
| !! | TTTTTCTTTTGCAATAAACC+TGG | - | chr6.3:49470182-49470201 | MS.gene84797:intron | 25.0% |
| !!! | ATAATTTGTGCAGCTTTATT+TGG | - | chr6.3:49474995-49475014 | MS.gene84797:intron | 25.0% |
| !!! | TAGTTGTTTTCAAAATGTTG+TGG | - | chr6.3:49470459-49470478 | MS.gene84797:CDS | 25.0% |
| !!! | TATTAGCCATTTTTCTGTAT+TGG | + | chr6.3:49471792-49471811 | None:intergenic | 25.0% |
| !!! | TGGTTTAATGCATTGTTTTT+TGG | - | chr6.3:49474576-49474595 | MS.gene84797:CDS | 25.0% |
| !!! | TTGAGAATACTTTTAGAAGT+CGG | + | chr6.3:49474848-49474867 | None:intergenic | 25.0% |
| !!! | TTTCCATAGTCATTTGTTTT+TGG | - | chr6.3:49474556-49474575 | MS.gene84797:intron | 25.0% |
| AAACTTTCACATAGCACAAA+AGG | - | chr6.3:49473641-49473660 | MS.gene84797:CDS | 30.0% | |
| AAGCAGTATAAAACAACGAT+TGG | + | chr6.3:49475615-49475634 | None:intergenic | 30.0% | |
| AATAAGAAGAAACAGAAGGT+AGG | + | chr6.3:49472579-49472598 | None:intergenic | 30.0% | |
| ACAAAACCAGTTTAATTCTC+AGG | + | chr6.3:49470708-49470727 | None:intergenic | 30.0% | |
| ACAATGAGAAGTTCACAAAA+TGG | + | chr6.3:49471047-49471066 | None:intergenic | 30.0% | |
| ACATAAAATTCAAAAGGTCG+TGG | + | chr6.3:49471149-49471168 | None:intergenic | 30.0% | |
| AGAGATTATGTTTACAACTG+AGG | + | chr6.3:49474656-49474675 | None:intergenic | 30.0% | |
| AGTATTAAAACAAGGTAGTG+AGG | - | chr6.3:49474616-49474635 | MS.gene84797:CDS | 30.0% | |
| AGTCAAAAAGTAAAGGTTGA+AGG | - | chr6.3:49470500-49470519 | MS.gene84797:CDS | 30.0% | |
| AGTGATTCTCTACAATATCA+TGG | + | chr6.3:49471330-49471349 | None:intergenic | 30.0% | |
| ATCAGATAAACAAAAACCTC+CGG | - | chr6.3:49473688-49473707 | MS.gene84797:CDS | 30.0% | |
| ATGACTTAAGTTTGCAATCT+TGG | + | chr6.3:49471426-49471445 | None:intergenic | 30.0% | |
| ATGGAATCAGAAATTCAACA+AGG | - | chr6.3:49473276-49473295 | MS.gene84797:CDS | 30.0% | |
| ATTGCATCAGATGTATTTGT+GGG | - | chr6.3:49474242-49474261 | MS.gene84797:intron | 30.0% | |
| CAAACACTTTGATCAGATAT+CGG | + | chr6.3:49471114-49471133 | None:intergenic | 30.0% | |
| CAATTCCTATATGATTGTTC+AGG | - | chr6.3:49474187-49474206 | MS.gene84797:intron | 30.0% | |
| CATGACCTCAAATTGATAAA+AGG | - | chr6.3:49470001-49470020 | MS.gene84797:intron | 30.0% | |
| CTAAAATGTTTAAGCAACAC+AGG | + | chr6.3:49472433-49472452 | None:intergenic | 30.0% | |
| CTAACATGTGTCAGATAATA+AGG | - | chr6.3:49474159-49474178 | MS.gene84797:intron | 30.0% | |
| CTAGAATAAGAAGAAACAGA+AGG | + | chr6.3:49472583-49472602 | None:intergenic | 30.0% | |
| GACATAATATGAGAAGCAAA+TGG | - | chr6.3:49470555-49470574 | MS.gene84797:intron | 30.0% | |
| GTTGTAGATATTCATCTCAA+TGG | - | chr6.3:49470647-49470666 | MS.gene84797:intron | 30.0% | |
| TAATAGCTTGATGCAAATGA+CGG | + | chr6.3:49475067-49475086 | None:intergenic | 30.0% | |
| TACATTTGAGAATTCACAAG+TGG | + | chr6.3:49473818-49473837 | None:intergenic | 30.0% | |
| TACGTATATACATACCTGTT+GGG | + | chr6.3:49475140-49475159 | None:intergenic | 30.0% | |
| TAGATATTCATCTCAATGGA+AGG | - | chr6.3:49470651-49470670 | MS.gene84797:intron | 30.0% | |
| TATTGCATCAGATGTATTTG+TGG | - | chr6.3:49474241-49474260 | MS.gene84797:intron | 30.0% | |
| TCAGTTGTAAACATAATCTC+TGG | - | chr6.3:49474655-49474674 | MS.gene84797:intron | 30.0% | |
| TCATATCAACTAGCAGTATT+AGG | - | chr6.3:49473134-49473153 | MS.gene84797:CDS | 30.0% | |
| TGACATAGAAATTGAACACT+TGG | + | chr6.3:49473463-49473482 | None:intergenic | 30.0% | |
| TGTACTGTACATAATATTGC+AGG | + | chr6.3:49471600-49471619 | None:intergenic | 30.0% | |
| TTAATAACGACGAAATTCTG+TGG | - | chr6.3:49474765-49474784 | MS.gene84797:intron | 30.0% | |
| TTACAGAAACAGTCATACTA+TGG | - | chr6.3:49474300-49474319 | MS.gene84797:intron | 30.0% | |
| TTCTCAAATGTATTTGGGTA+TGG | - | chr6.3:49473826-49473845 | MS.gene84797:CDS | 30.0% | |
| TTCTCGTATATGACAACAAT+AGG | + | chr6.3:49470386-49470405 | None:intergenic | 30.0% | |
| TTTACCTGAAAAATTCCAGA+AGG | + | chr6.3:49473881-49473900 | None:intergenic | 30.0% | |
| TTTCGCTTCTCCTTAAAAAA+CGG | - | chr6.3:49472299-49472318 | MS.gene84797:intron | 30.0% | |
| ! | AACATTGTACGAACGATTTT+TGG | - | chr6.3:49470053-49470072 | MS.gene84797:intron | 30.0% |
| ! | ATACTGATCAATGTCGATTA+GGG | + | chr6.3:49475360-49475379 | None:intergenic | 30.0% |
| ! | ATTTAAGATAGCAATGTCTG+TGG | + | chr6.3:49475245-49475264 | None:intergenic | 30.0% |
| ! | CAATGTGTTAGATAGTGTTT+TGG | - | chr6.3:49470786-49470805 | MS.gene84797:intron | 30.0% |
| ! | CGTTAGCATTGAAAAATCTT+GGG | - | chr6.3:49472047-49472066 | MS.gene84797:CDS | 30.0% |
| ! | GTTAGCATTGAAAAATCTTG+GGG | - | chr6.3:49472048-49472067 | MS.gene84797:CDS | 30.0% |
| ! | TAGACCCTTTTATCAATTTG+AGG | + | chr6.3:49470009-49470028 | None:intergenic | 30.0% |
| ! | TTTTATAAGACTTACCGAAG+TGG | - | chr6.3:49474214-49474233 | MS.gene84797:intron | 30.0% |
| ! | TTTTTGTCTGTGTTCAGTAA+TGG | + | chr6.3:49471960-49471979 | None:intergenic | 30.0% |
| !! | AAGATTTTTCAATGCTAACG+CGG | + | chr6.3:49472047-49472066 | None:intergenic | 30.0% |
| !! | CTTTTATCAATTTGAGGTCA+TGG | + | chr6.3:49470003-49470022 | None:intergenic | 30.0% |
| !! | GTGAGTCTGATATTACTTTT+TGG | + | chr6.3:49474969-49474988 | None:intergenic | 30.0% |
| !! | TGAGAATACTTTTAGAAGTC+GGG | + | chr6.3:49474847-49474866 | None:intergenic | 30.0% |
| !! | TTTTAACTACCAATCCACAT+TGG | + | chr6.3:49475202-49475221 | None:intergenic | 30.0% |
| !!! | GTAATCCAGGTTTTAAATAG+TGG | - | chr6.3:49471292-49471311 | MS.gene84797:CDS | 30.0% |
| !!! | TGATATTACTTTTTGGTGAG+TGG | + | chr6.3:49474962-49474981 | None:intergenic | 30.0% |
| AAATTCAAAAGGTCGTGGAA+CGG | + | chr6.3:49471144-49471163 | None:intergenic | 35.0% | |
| AAGCTCCTATATTCACACAA+AGG | + | chr6.3:49473378-49473397 | None:intergenic | 35.0% | |
| AAGCTCCTGAACAATCATAT+AGG | + | chr6.3:49474195-49474214 | None:intergenic | 35.0% | |
| AAGGATGTTTCATGCTTTCT+TGG | - | chr6.3:49473905-49473924 | MS.gene84797:CDS | 35.0% | |
| AATAGCTTGATGCAAATGAC+GGG | + | chr6.3:49475066-49475085 | None:intergenic | 35.0% | |
| ACAAGCTCAATCTGAATTGT+CGG | + | chr6.3:49472824-49472843 | None:intergenic | 35.0% | |
| ACACATTGCATAAGAAGACA+TGG | + | chr6.3:49470774-49470793 | None:intergenic | 35.0% | |
| ACCAGTTTAATTCTCAGGAA+TGG | + | chr6.3:49470703-49470722 | None:intergenic | 35.0% | |
| ACTACTAGGAAAAGCAATAC+TGG | - | chr6.3:49472553-49472572 | MS.gene84797:intron | 35.0% | |
| AGAGAGATTTCAGATCTTGA+AGG | - | chr6.3:49471623-49471642 | MS.gene84797:intron | 35.0% | |
| AGCAATCGAAAACATAATCG+AGG | + | chr6.3:49471561-49471580 | None:intergenic | 35.0% | |
| AGGATGTTTCATGCTTTCTT+GGG | - | chr6.3:49473906-49473925 | MS.gene84797:CDS | 35.0% | |
| AGTGTGGTATGAATTTGACA+TGG | - | chr6.3:49473257-49473276 | MS.gene84797:CDS | 35.0% | |
| ATACATCTGAGCTAGTAACT+TGG | - | chr6.3:49472254-49472273 | MS.gene84797:intron | 35.0% | |
| ATCAGATGTATTTGTGGGAA+GGG | - | chr6.3:49474247-49474266 | MS.gene84797:intron | 35.0% | |
| ATCATAAATAGAGGTCAGTG+TGG | - | chr6.3:49473241-49473260 | MS.gene84797:CDS | 35.0% | |
| ATCTTCATCTACATTGTCGA+AGG | + | chr6.3:49475740-49475759 | None:intergenic | 35.0% | |
| ATGACCAAGGAGTTACATTA+TGG | - | chr6.3:49471507-49471526 | MS.gene84797:intron | 35.0% | |
| ATTGTATCCATATGCATTGG+TGG | - | chr6.3:49474130-49474149 | MS.gene84797:intron | 35.0% | |
| CAAATTCAACTCAATGGTTC+AGG | - | chr6.3:49472642-49472661 | MS.gene84797:intron | 35.0% | |
| CAGTTTAATTCTCAGGAATG+GGG | + | chr6.3:49470701-49470720 | None:intergenic | 35.0% | |
| CCAGTTTAATTCTCAGGAAT+GGG | + | chr6.3:49470702-49470721 | None:intergenic | 35.0% | |
| CGAGTTTACAAGTACATGTT+CGG | + | chr6.3:49474515-49474534 | None:intergenic | 35.0% | |
| CTAATTACTCTGCCTTCATA+CGG | - | chr6.3:49470964-49470983 | MS.gene84797:intron | 35.0% | |
| CTACGTATATACATACCTGT+TGG | + | chr6.3:49475141-49475160 | None:intergenic | 35.0% | |
| CTCAGCTAATAGAACATCAA+GGG | + | chr6.3:49471828-49471847 | None:intergenic | 35.0% | |
| CTGTTAATAAATGCAATGCC+AGG | - | chr6.3:49473485-49473504 | MS.gene84797:CDS | 35.0% | |
| CTTAAGTTTGCAATCTTGGT+CGG | + | chr6.3:49471422-49471441 | None:intergenic | 35.0% | |
| GAAAAGAGTCGAAGAATCAA+TGG | - | chr6.3:49471847-49471866 | MS.gene84797:CDS | 35.0% | |
| GACATTGAAAGAACTCCTTT+AGG | - | chr6.3:49474350-49474369 | MS.gene84797:intron | 35.0% | |
| GAGCTATAATCATGCATGTT+TGG | - | chr6.3:49475429-49475448 | MS.gene84797:intron | 35.0% | |
| GATACCATAATGTAACTCCT+TGG | + | chr6.3:49471514-49471533 | None:intergenic | 35.0% | |
| GCGAAATGGTTGAAAAAACA+AGG | + | chr6.3:49472186-49472205 | None:intergenic | 35.0% | |
| GGAATATTCGAATATGACCA+AGG | - | chr6.3:49471494-49471513 | MS.gene84797:intron | 35.0% | |
| GTGATTGTATCCATATGCAT+TGG | - | chr6.3:49474127-49474146 | MS.gene84797:intron | 35.0% | |
| GTTGGATAAAAGGTTTCTCA+TGG | + | chr6.3:49471660-49471679 | None:intergenic | 35.0% | |
| TACATCTGAGCTAGTAACTT+GGG | - | chr6.3:49472255-49472274 | MS.gene84797:intron | 35.0% | |
| TATACGAGAAGAGATTGTTG+CGG | - | chr6.3:49470396-49470415 | MS.gene84797:intron | 35.0% | |
| TATACGTAGCTGAAAATAGC+AGG | - | chr6.3:49475152-49475171 | MS.gene84797:intron | 35.0% | |
| TCAAATGTATTTGGGTATGG+AGG | - | chr6.3:49473829-49473848 | MS.gene84797:CDS | 35.0% | |
| TCCAATTGTAGGATTTCAAG+TGG | + | chr6.3:49473416-49473435 | None:intergenic | 35.0% | |
| TCCACTTGAAATCCTACAAT+TGG | - | chr6.3:49473412-49473431 | MS.gene84797:CDS | 35.0% | |
| TCTCAGCTAATAGAACATCA+AGG | + | chr6.3:49471829-49471848 | None:intergenic | 35.0% | |
| TCTTTCAATGTCATCCCAAA+AGG | + | chr6.3:49474342-49474361 | None:intergenic | 35.0% | |
| TGCTCACAAATTCAACTCAA+TGG | - | chr6.3:49472636-49472655 | MS.gene84797:intron | 35.0% | |
| TGTAGATGGCAAATTGATAG+CGG | - | chr6.3:49475175-49475194 | MS.gene84797:intron | 35.0% | |
| TGTCTAACATCTACCACATA+TGG | + | chr6.3:49470539-49470558 | None:intergenic | 35.0% | |
| TTAAGTTTGCAATCTTGGTC+GGG | + | chr6.3:49471421-49471440 | None:intergenic | 35.0% | |
| ! | CAAGTTAAGTTGCTGATAAG+CGG | - | chr6.3:49474711-49474730 | MS.gene84797:intron | 35.0% |
| ! | CAATTCAGATTGAGCTTGTT+CGG | - | chr6.3:49472825-49472844 | MS.gene84797:intron | 35.0% |
| ! | CATGACCACTATTTAAAACC+TGG | + | chr6.3:49471300-49471319 | None:intergenic | 35.0% |
| ! | GATAAGCTTAGGGTTTTCAA+AGG | - | chr6.3:49469849-49469868 | MS.gene84797:CDS | 35.0% |
| ! | GATACTGATCAATGTCGATT+AGG | + | chr6.3:49475361-49475380 | None:intergenic | 35.0% |
| ! | GATTCTTTGACAGTTTTTGC+TGG | - | chr6.3:49472217-49472236 | MS.gene84797:intron | 35.0% |
| ! | GCGTTAGCATTGAAAAATCT+TGG | - | chr6.3:49472046-49472065 | MS.gene84797:CDS | 35.0% |
| ! | GTGATGATATTTTCATCCCA+AGG | - | chr6.3:49475029-49475048 | MS.gene84797:intron | 35.0% |
| ! | TGAAGTGCTTGAAACAAACT+TGG | + | chr6.3:49471932-49471951 | None:intergenic | 35.0% |
| ! | TTCAAGATCTGAAATCTCTC+TGG | + | chr6.3:49471624-49471643 | None:intergenic | 35.0% |
| ! | TTTTCTTAGTGTTAACCCTC+CGG | + | chr6.3:49470139-49470158 | None:intergenic | 35.0% |
| !! | ACTTTAGAACTAAGAGCAGA+TGG | + | chr6.3:49474410-49474429 | None:intergenic | 35.0% |
| !! | GTATTGCTTTTCCTAGTAGT+TGG | + | chr6.3:49472553-49472572 | None:intergenic | 35.0% |
| !! | TTTATTTTTCGACGGAACTC+TGG | - | chr6.3:49470086-49470105 | MS.gene84797:intron | 35.0% |
| !!! | GTTTCCTTCTGGAATTTTTC+AGG | - | chr6.3:49473874-49473893 | MS.gene84797:CDS | 35.0% |
| ACACAACAGATAGCATTGCT+AGG | - | chr6.3:49473572-49473591 | MS.gene84797:CDS | 40.0% | |
| ACAGACCCAAATATCAGACA+CGG | + | chr6.3:49472931-49472950 | None:intergenic | 40.0% | |
| ACCTAGAGGAAAATAGGCTT+GGG | + | chr6.3:49472978-49472997 | None:intergenic | 40.0% | |
| ACGAGATTTGGAAGCAACAT+AGG | + | chr6.3:49469895-49469914 | None:intergenic | 40.0% | |
| ACTAGCTCAGATGTATATGC+AGG | + | chr6.3:49472250-49472269 | None:intergenic | 40.0% | |
| ACTGTGAGCTTCTACTTCTA+AGG | - | chr6.3:49475402-49475421 | MS.gene84797:intron | 40.0% | |
| AGTAACACTCTACCTGTTGA+AGG | + | chr6.3:49474385-49474404 | None:intergenic | 40.0% | |
| AGTAGTAATGTATGAGCTCG+AGG | + | chr6.3:49472079-49472098 | None:intergenic | 40.0% | |
| AGTGTATGCACTAACTGTTG+TGG | + | chr6.3:49472149-49472168 | None:intergenic | 40.0% | |
| ATCTCGTAGCATGAATGAGA+AGG | - | chr6.3:49469908-49469927 | MS.gene84797:intron | 40.0% | |
| ATGCAGCTTGGTTGGATAAA+AGG | + | chr6.3:49471670-49471689 | None:intergenic | 40.0% | |
| ATGTATTTGTGGGAAGGGAA+AGG | - | chr6.3:49474252-49474271 | MS.gene84797:intron | 40.0% | |
| ATTCCAGAAGGAAACCATTC+AGG | + | chr6.3:49473869-49473888 | None:intergenic | 40.0% | |
| ATTTGGGTATGGAGGAGAAA+GGG | - | chr6.3:49473837-49473856 | MS.gene84797:CDS | 40.0% | |
| CACTCTCAGTGATAAGCTTA+GGG | - | chr6.3:49469839-49469858 | MS.gene84797:CDS | 40.0% | |
| CAGTACCGTGTCTGATATTT+GGG | - | chr6.3:49472923-49472942 | MS.gene84797:CDS | 40.0% | |
| CATCAGATGTATTTGTGGGA+AGG | - | chr6.3:49474246-49474265 | MS.gene84797:intron | 40.0% | |
| CCCATTCCTGAGAATTAAAC+TGG | - | chr6.3:49470699-49470718 | MS.gene84797:intron | 40.0% | |
| CTCATTCATGCTACGAGATT+TGG | + | chr6.3:49469907-49469926 | None:intergenic | 40.0% | |
| CTGAAAATAGCAGGTGTAGA+TGG | - | chr6.3:49475161-49475180 | MS.gene84797:intron | 40.0% | |
| CTTATCACTGAGAGTGAGAT+TGG | + | chr6.3:49469835-49469854 | None:intergenic | 40.0% | |
| CTTGATGAAACTGATCCTCT+TGG | + | chr6.3:49469786-49469805 | None:intergenic | 40.0% | |
| GAAACAGGGTTTCAAATTGC+AGG | + | chr6.3:49473213-49473232 | None:intergenic | 40.0% | |
| GAAACCATGGCAAAAAAGTG+AGG | + | chr6.3:49472707-49472726 | None:intergenic | 40.0% | |
| GAACTCATCTTCACAGTAGA+CGG | - | chr6.3:49473788-49473807 | MS.gene84797:CDS | 40.0% | |
| GCATTGAAAAATCTTGGGGA+CGG | - | chr6.3:49472052-49472071 | MS.gene84797:CDS | 40.0% | |
| GGAATGGGGATAACTTAACT+AGG | + | chr6.3:49470687-49470706 | None:intergenic | 40.0% | |
| GGAGGGTTAACACTAAGAAA+AGG | - | chr6.3:49470138-49470157 | MS.gene84797:intron | 40.0% | |
| GGATCAGTTTCATCAAGCAT+TGG | - | chr6.3:49469789-49469808 | MS.gene84797:CDS | 40.0% | |
| GTAAGTGCTTGCTCAACAAA+TGG | + | chr6.3:49472457-49472476 | None:intergenic | 40.0% | |
| GTACTTGTAAACTCGTGTCA+CGG | - | chr6.3:49474520-49474539 | MS.gene84797:intron | 40.0% | |
| TACTTGTAAACTCGTGTCAC+GGG | - | chr6.3:49474521-49474540 | MS.gene84797:intron | 40.0% | |
| TAGCAGTATTAGGCCTAATG+CGG | - | chr6.3:49473144-49473163 | MS.gene84797:CDS | 40.0% | |
| TATGTCCGAATCTTCGTTTC+CGG | + | chr6.3:49471738-49471757 | None:intergenic | 40.0% | |
| TATTATGGAGTACGTGGCAA+TGG | + | chr6.3:49472756-49472775 | None:intergenic | 40.0% | |
| TATTTGGGTATGGAGGAGAA+AGG | - | chr6.3:49473836-49473855 | MS.gene84797:CDS | 40.0% | |
| TCACTCTCAGTGATAAGCTT+AGG | - | chr6.3:49469838-49469857 | MS.gene84797:CDS | 40.0% | |
| TCAGTACCGTGTCTGATATT+TGG | - | chr6.3:49472922-49472941 | MS.gene84797:CDS | 40.0% | |
| TGCAATAAACCTGGCTATGT+TGG | - | chr6.3:49470191-49470210 | MS.gene84797:intron | 40.0% | |
| TGGTTCATGGTTTAGCAGAA+GGG | - | chr6.3:49471690-49471709 | MS.gene84797:CDS | 40.0% | |
| TTGGAAGCAACATAGGCATT+GGG | + | chr6.3:49469888-49469907 | None:intergenic | 40.0% | |
| TTGGTTCATGGTTTAGCAGA+AGG | - | chr6.3:49471689-49471708 | MS.gene84797:CDS | 40.0% | |
| TTTATCCAACCAAGCTGCAT+TGG | - | chr6.3:49471670-49471689 | MS.gene84797:CDS | 40.0% | |
| TTTGGAAGCAACATAGGCAT+TGG | + | chr6.3:49469889-49469908 | None:intergenic | 40.0% | |
| ! | AAGCCTATTTTCCTCTAGGT+GGG | - | chr6.3:49472978-49472997 | MS.gene84797:CDS | 40.0% |
| ! | ACTGAGAATCTAGAAAGCAC+AGG | - | chr6.3:49473518-49473537 | MS.gene84797:CDS | 40.0% |
| ! | ACTTTTGCGCATTTCTTCTG+CGG | + | chr6.3:49470937-49470956 | None:intergenic | 40.0% |
| ! | AGCCTCTAAAAGATGACAGT+GGG | + | chr6.3:49472392-49472411 | None:intergenic | 40.0% |
| ! | CTTTAGCTTCTGCTGATGAT+TGG | - | chr6.3:49472512-49472531 | MS.gene84797:intron | 40.0% |
| ! | GAAAGTTTGATAACAGCACG+CGG | + | chr6.3:49473629-49473648 | None:intergenic | 40.0% |
| ! | TACCCACTGTCATCTTTTAG+AGG | - | chr6.3:49472387-49472406 | MS.gene84797:intron | 40.0% |
| ! | TAGCCTCTAAAAGATGACAG+TGG | + | chr6.3:49472393-49472412 | None:intergenic | 40.0% |
| ! | TATTTTCCTCTAGGTGGGAT+GGG | - | chr6.3:49472983-49473002 | MS.gene84797:CDS | 40.0% |
| ! | TGATGCAATAGTTGCCACTT+CGG | + | chr6.3:49474231-49474250 | None:intergenic | 40.0% |
| ! | TTCTGATGACCAAGCCTTTT+GGG | - | chr6.3:49474325-49474344 | MS.gene84797:intron | 40.0% |
| ! | TTTCTGATGACCAAGCCTTT+TGG | - | chr6.3:49474324-49474343 | MS.gene84797:intron | 40.0% |
| !! | AAATTGATAGCGGTCCAATG+TGG | - | chr6.3:49475185-49475204 | MS.gene84797:intron | 40.0% |
| !! | TCAATGGCTGCTTTAGAAGA+AGG | - | chr6.3:49471863-49471882 | MS.gene84797:CDS | 40.0% |
| !! | TCTTTTAGAGGCTAGTGGAA+TGG | - | chr6.3:49472399-49472418 | MS.gene84797:intron | 40.0% |
| !! | TGAGCACTGATTGAAAGCTT+AGG | + | chr6.3:49472622-49472641 | None:intergenic | 40.0% |
| !! | TGTCATCTTTTAGAGGCTAG+TGG | - | chr6.3:49472394-49472413 | MS.gene84797:intron | 40.0% |
| !!! | AGGCGAGAATCCGTTTTTTA+AGG | + | chr6.3:49472312-49472331 | None:intergenic | 40.0% |
| AAATCACTGTCTCAACCGTG+AGG | + | chr6.3:49475291-49475310 | None:intergenic | 45.0% | |
| AACCATGAACCAATGCAGCT+TGG | + | chr6.3:49471682-49471701 | None:intergenic | 45.0% | |
| AAGTTGCTGATAAGCGGACA+CGG | - | chr6.3:49474717-49474736 | MS.gene84797:intron | 45.0% | |
| ACCATGGCAAAAAAGTGAGG+AGG | + | chr6.3:49472704-49472723 | None:intergenic | 45.0% | |
| ACGGGATAAGTAACGACCTT+GGG | + | chr6.3:49475048-49475067 | None:intergenic | 45.0% | |
| AGAACTCCTTTAGGTCCTCT+TGG | - | chr6.3:49474359-49474378 | MS.gene84797:intron | 45.0% | |
| AGACCTGAATGGTTTCCTTC+TGG | - | chr6.3:49473863-49473882 | MS.gene84797:CDS | 45.0% | |
| ATCTGACGTTGCTTGCGAAA+TGG | + | chr6.3:49472200-49472219 | None:intergenic | 45.0% | |
| ATGAACCAATGCAGCTTGGT+TGG | + | chr6.3:49471678-49471697 | None:intergenic | 45.0% | |
| ATTGATGCTGTTGCTGCTAC+AGG | - | chr6.3:49475107-49475126 | MS.gene84797:intron | 45.0% | |
| CAATGTCATCCCAAAAGGCT+TGG | + | chr6.3:49474337-49474356 | None:intergenic | 45.0% | |
| CACCTAGAGGAAAATAGGCT+TGG | + | chr6.3:49472979-49472998 | None:intergenic | 45.0% | |
| CATCCCACCTAGAGGAAAAT+AGG | + | chr6.3:49472984-49473003 | None:intergenic | 45.0% | |
| CATGATCGGCCACAATACTA+TGG | + | chr6.3:49473182-49473201 | None:intergenic | 45.0% | |
| CGCAAGCAATTGTGAAACCA+TGG | + | chr6.3:49472720-49472739 | None:intergenic | 45.0% | |
| CGGACACAACCATAGTATTG+TGG | - | chr6.3:49473170-49473189 | MS.gene84797:CDS | 45.0% | |
| CGTAGCATGAATGAGAAGGT+CGG | - | chr6.3:49469912-49469931 | MS.gene84797:intron | 45.0% | |
| CGTTCGTACAATGTTCATCG+AGG | + | chr6.3:49470048-49470067 | None:intergenic | 45.0% | |
| GAAGGTCGGTCTCAATTTCT+TGG | - | chr6.3:49469926-49469945 | MS.gene84797:intron | 45.0% | |
| GACGGAACTCTGGATTACTA+GGG | - | chr6.3:49470096-49470115 | MS.gene84797:intron | 45.0% | |
| GCAATCTTGGTCGGGAAATT+AGG | + | chr6.3:49471413-49471432 | None:intergenic | 45.0% | |
| GTAGCATACTCACCGTATGA+AGG | + | chr6.3:49470979-49470998 | None:intergenic | 45.0% | |
| GTGCAAGTCGATCCAATTGT+AGG | + | chr6.3:49473427-49473446 | None:intergenic | 45.0% | |
| TATTAGGCCTAATGCGGTTG+CGG | - | chr6.3:49473150-49473169 | MS.gene84797:CDS | 45.0% | |
| TCAACAAACCACTCATCCTC+TGG | + | chr6.3:49475676-49475695 | None:intergenic | 45.0% | |
| TGAATACAGTGTCTTGCCAG+AGG | - | chr6.3:49475657-49475676 | MS.gene84797:CDS | 45.0% | |
| TGGCTTATGCACCAACTACT+AGG | - | chr6.3:49472539-49472558 | MS.gene84797:intron | 45.0% | |
| TGTGTCAGTTGAGATTGCAC+TGG | - | chr6.3:49471367-49471386 | MS.gene84797:intron | 45.0% | |
| TTACCATTCGTGACTCCAAG+AGG | - | chr6.3:49469768-49469787 | MS.gene84797:CDS | 45.0% | |
| TTCTTCAGTTCACGCTGTTC+CGG | + | chr6.3:49473710-49473729 | None:intergenic | 45.0% | |
| TTGATGCTGTTGCTGCTACA+GGG | - | chr6.3:49475108-49475127 | MS.gene84797:intron | 45.0% | |
| TTTGGGTATGGAGGAGAAAG+GGG | - | chr6.3:49473838-49473857 | MS.gene84797:CDS | 45.0% | |
| ! | ACCCAAGCCTATTTTCCTCT+AGG | - | chr6.3:49472974-49472993 | MS.gene84797:CDS | 45.0% |
| ! | CAAGCCTATTTTCCTCTAGG+TGG | - | chr6.3:49472977-49472996 | MS.gene84797:CDS | 45.0% |
| ! | CACTGATTGAAAGCTTAGGC+TGG | + | chr6.3:49472618-49472637 | None:intergenic | 45.0% |
| ! | CTATTTTCCTCTAGGTGGGA+TGG | - | chr6.3:49472982-49473001 | MS.gene84797:CDS | 45.0% |
| ! | GAGCTTCTACTTCTAAGGAG+AGG | - | chr6.3:49475407-49475426 | MS.gene84797:intron | 45.0% |
| ! | TTCTGCTGATGATTGGTTGC+TGG | - | chr6.3:49472519-49472538 | MS.gene84797:intron | 45.0% |
| !! | AACCAAGCTGCATTGGTTCA+TGG | - | chr6.3:49471677-49471696 | MS.gene84797:CDS | 45.0% |
| !! | ATATCAGACACGGTACTGAC+AGG | + | chr6.3:49472921-49472940 | None:intergenic | 45.0% |
| !! | CGGCACTGACATATAGACAA+TGG | - | chr6.3:49474079-49474098 | MS.gene84797:intron | 45.0% |
| !! | CGGTACTGACAGGTAAACAT+TGG | + | chr6.3:49472911-49472930 | None:intergenic | 45.0% |
| !! | GCGTCATTGATTCATGTAGC+AGG | + | chr6.3:49473010-49473029 | None:intergenic | 45.0% |
| !! | TTAGCAGAAGGGTGTCAACT+TGG | - | chr6.3:49471701-49471720 | MS.gene84797:CDS | 45.0% |
| !! | TTGGATCGACTTGCACTAGA+AGG | - | chr6.3:49473431-49473450 | MS.gene84797:CDS | 45.0% |
| !!! | TCCTCCTCACTTTTTTGCCA+TGG | - | chr6.3:49472700-49472719 | MS.gene84797:intron | 45.0% |
| AAGACCTCCTGATGCAGCTA+TGG | + | chr6.3:49472335-49472354 | None:intergenic | 50.0% | |
| AGAAAGGGGAGAGACCTGAA+TGG | - | chr6.3:49473852-49473871 | MS.gene84797:CDS | 50.0% | |
| ATCTTCGTTTCCGGTCACCA+AGG | + | chr6.3:49471729-49471748 | None:intergenic | 50.0% | |
| CGACGGAACTCTGGATTACT+AGG | - | chr6.3:49470095-49470114 | MS.gene84797:intron | 50.0% | |
| GAAGATGCTTATAGCCCCAC+CGG | - | chr6.3:49475754-49475773 | MS.gene84797:CDS | 50.0% | |
| GACGGGATAAGTAACGACCT+TGG | + | chr6.3:49475049-49475068 | None:intergenic | 50.0% | |
| GATCCTCTTGGAGTCACGAA+TGG | + | chr6.3:49469774-49469793 | None:intergenic | 50.0% | |
| GGTGACCGGAAACGAAGATT+CGG | - | chr6.3:49471730-49471749 | MS.gene84797:CDS | 50.0% | |
| GTGTCTGCCACCAATGCATA+TGG | + | chr6.3:49474140-49474159 | None:intergenic | 50.0% | |
| TACTAGGGTTCCTTTCTCCC+AGG | - | chr6.3:49470111-49470130 | MS.gene84797:intron | 50.0% | |
| TCAGACACTGGACACGATGA+CGG | - | chr6.3:49474059-49474078 | MS.gene84797:intron | 50.0% | |
| TCTACCTGTTGAAGGCCAAG+AGG | + | chr6.3:49474377-49474396 | None:intergenic | 50.0% | |
| TCTCAACCGTGAGGATGAGA+AGG | + | chr6.3:49475282-49475301 | None:intergenic | 50.0% | |
| TCTGGTCCTTCTCATCCTCA+CGG | - | chr6.3:49475273-49475292 | MS.gene84797:intron | 50.0% | |
| TGAAGGCCAAGAGGACCTAA+AGG | + | chr6.3:49474368-49474387 | None:intergenic | 50.0% | |
| TGCAGGCTGCATCACATGAT+CGG | + | chr6.3:49473196-49473215 | None:intergenic | 50.0% | |
| TTCTCAGTGACAGCTGAACC+TGG | + | chr6.3:49473506-49473525 | None:intergenic | 50.0% | |
| TTGTAAACTCGTGTCACGGG+TGG | - | chr6.3:49474524-49474543 | MS.gene84797:intron | 50.0% | |
| ! | AGGGTGTCAACTTGGTTCCT+TGG | - | chr6.3:49471709-49471728 | MS.gene84797:CDS | 50.0% |
| ! | CAACTTGGTTCCTTGGTGAC+CGG | - | chr6.3:49471716-49471735 | MS.gene84797:CDS | 50.0% |
| ! | GATAGCGGTCCAATGTGGAT+TGG | - | chr6.3:49475190-49475209 | MS.gene84797:intron | 50.0% |
| ! | TAGGAGCTTTTCGAAGACGC+AGG | - | chr6.3:49473389-49473408 | MS.gene84797:CDS | 50.0% |
| ACCTCCTGATGCAGCTATGG+AGG | + | chr6.3:49472332-49472351 | None:intergenic | 55.0% | |
| AGTGTTAACCCTCCGGTTCC+TGG | + | chr6.3:49470132-49470151 | None:intergenic | 55.0% | |
| AGTTGCGTGCCAACATAGCC+AGG | + | chr6.3:49470203-49470222 | None:intergenic | 55.0% | |
| CTACAGGGCTAGATCCCAAC+AGG | - | chr6.3:49475123-49475142 | MS.gene84797:intron | 55.0% | |
| GGTTCCTTTCTCCCAGGAAC+CGG | - | chr6.3:49470117-49470136 | MS.gene84797:intron | 55.0% | |
| GTGTCTTGCCAGAGGATGAG+TGG | - | chr6.3:49475665-49475684 | MS.gene84797:CDS | 55.0% | |
| GTGTTAACCCTCCGGTTCCT+GGG | + | chr6.3:49470131-49470150 | None:intergenic | 55.0% | |
| GTTGTGTCCGCAACCGCATT+AGG | + | chr6.3:49473160-49473179 | None:intergenic | 55.0% | |
| TAAACTCGTGTCACGGGTGG+AGG | - | chr6.3:49474527-49474546 | MS.gene84797:intron | 55.0% | |
| TCAGACGATCAACTTCGCGC+TGG | + | chr6.3:49473739-49473758 | None:intergenic | 55.0% | |
| TTCAGTTCACGCTGTTCCGG+AGG | + | chr6.3:49473707-49473726 | None:intergenic | 55.0% | |
| ! | AGGTCCTCTTGGCCTTCAAC+AGG | - | chr6.3:49474370-49474389 | MS.gene84797:intron | 55.0% |
| CCTTTCTCCCAGGAACCGGA+GGG | - | chr6.3:49470121-49470140 | MS.gene84797:intron | 60.0% | |
| CGGTTGATCGAATCTCCGCG+CGG | + | chr6.3:49472027-49472046 | None:intergenic | 60.0% | |
| CTCGCCTCCATAGCTGCATC+AGG | - | chr6.3:49472325-49472344 | MS.gene84797:intron | 60.0% | |
| GCCTCCATAGCTGCATCAGG+AGG | - | chr6.3:49472328-49472347 | MS.gene84797:intron | 60.0% | |
| TCCTTTCTCCCAGGAACCGG+AGG | - | chr6.3:49470120-49470139 | MS.gene84797:intron | 60.0% | |
| ! | TATGCGTGGGCTGATCCGGT+GGG | + | chr6.3:49475772-49475791 | None:intergenic | 60.0% |
| ! | TTATGCGTGGGCTGATCCGG+TGG | + | chr6.3:49475773-49475792 | None:intergenic | 60.0% |
| CCAACCATCAACTCGCCGCG+CGG | - | chr6.3:49472009-49472028 | MS.gene84797:CDS | 65.0% | |
| CCCTCCGGTTCCTGGGAGAA+AGG | + | chr6.3:49470124-49470143 | None:intergenic | 65.0% | |
| GCAGGTCCCATCCCACCTAG+AGG | + | chr6.3:49472992-49473011 | None:intergenic | 65.0% | |
| ! | ATCTCCGCGCGGCGAGTTGA+TGG | + | chr6.3:49472016-49472035 | None:intergenic | 65.0% |
| ! | ATGCGTGGGCTGATCCGGTG+GGG | + | chr6.3:49475771-49475790 | None:intergenic | 65.0% |
| !! | CCGCGCGGCGAGTTGATGGT+TGG | + | chr6.3:49472012-49472031 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 49469753 | 49475792 | 49469753 | ID=MS.gene84797 |
| chr6.3 | mRNA | 49469753 | 49475792 | 49469753 | ID=MS.gene84797.t1;Parent=MS.gene84797 |
| chr6.3 | exon | 49475616 | 49475792 | 49475616 | ID=MS.gene84797.t1.exon1;Parent=MS.gene84797.t1 |
| chr6.3 | CDS | 49475616 | 49475792 | 49475616 | ID=cds.MS.gene84797.t1;Parent=MS.gene84797.t1 |
| chr6.3 | exon | 49474560 | 49474657 | 49474560 | ID=MS.gene84797.t1.exon2;Parent=MS.gene84797.t1 |
| chr6.3 | CDS | 49474560 | 49474657 | 49474560 | ID=cds.MS.gene84797.t1;Parent=MS.gene84797.t1 |
| chr6.3 | exon | 49472882 | 49473929 | 49472882 | ID=MS.gene84797.t1.exon3;Parent=MS.gene84797.t1 |
| chr6.3 | CDS | 49472882 | 49473929 | 49472882 | ID=cds.MS.gene84797.t1;Parent=MS.gene84797.t1 |
| chr6.3 | exon | 49471650 | 49472153 | 49471650 | ID=MS.gene84797.t1.exon4;Parent=MS.gene84797.t1 |
| chr6.3 | CDS | 49471650 | 49472153 | 49471650 | ID=cds.MS.gene84797.t1;Parent=MS.gene84797.t1 |
| chr6.3 | exon | 49471154 | 49471336 | 49471154 | ID=MS.gene84797.t1.exon5;Parent=MS.gene84797.t1 |
| chr6.3 | CDS | 49471154 | 49471336 | 49471154 | ID=cds.MS.gene84797.t1;Parent=MS.gene84797.t1 |
| chr6.3 | exon | 49470401 | 49470537 | 49470401 | ID=MS.gene84797.t1.exon6;Parent=MS.gene84797.t1 |
| chr6.3 | CDS | 49470401 | 49470537 | 49470401 | ID=cds.MS.gene84797.t1;Parent=MS.gene84797.t1 |
| chr6.3 | exon | 49469753 | 49469879 | 49469753 | ID=MS.gene84797.t1.exon7;Parent=MS.gene84797.t1 |
| chr6.3 | CDS | 49469753 | 49469879 | 49469753 | ID=cds.MS.gene84797.t1;Parent=MS.gene84797.t1 |
| Gene Sequence |
| Protein sequence |
