AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene85423

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85423.t1 MTR_7g078330 97.218 647 17 1 1 647 1 646 0.0 1280
MS.gene85423.t1 MTR_4g063800 42.258 620 340 4 39 643 12 628 6.59e-168 495
MS.gene85423.t1 MTR_1g094215 42.029 621 348 4 30 645 9 622 1.20e-147 442
MS.gene85423.t1 MTR_7g059405 38.736 617 355 7 43 641 21 632 4.18e-127 389
MS.gene85423.t1 MTR_4g485520 38.915 627 335 12 54 647 41 652 3.22e-121 375
MS.gene85423.t1 MTR_1g094215 45.598 443 232 3 208 645 1 439 6.14e-114 349
MS.gene85423.t1 MTR_4g485520 47.792 385 190 3 272 647 102 484 2.52e-112 346
MS.gene85423.t1 MTR_5g083030 32.180 665 377 12 43 643 31 685 8.65e-94 304
MS.gene85423.t1 MTR_2g018010 34.873 628 369 17 53 645 55 677 1.52e-89 293
MS.gene85423.t1 MTR_7g053260 35.526 380 234 8 272 643 75 451 8.55e-66 223
MS.gene85423.t1 MTR_3g466220 48.921 278 141 1 365 642 529 805 1.81e-63 225
MS.gene85423.t1 MTR_3g466220 35.928 167 89 3 187 349 134 286 6.29e-25 110
MS.gene85423.t1 MTR_3g466220 48.921 278 141 1 365 642 550 826 2.08e-63 225
MS.gene85423.t1 MTR_3g466220 35.928 167 89 3 187 349 155 307 5.82e-25 110
MS.gene85423.t1 MTR_3g103050 39.286 308 168 3 355 643 23 330 1.18e-62 211
MS.gene85423.t1 MTR_1g069845 46.468 269 143 1 371 639 326 593 5.41e-62 217
MS.gene85423.t1 MTR_1g069845 26.598 485 272 12 203 639 62 510 3.71e-34 138
MS.gene85423.t1 MTR_1g018180 40.138 289 170 2 362 647 54 342 5.52e-62 210
MS.gene85423.t1 MTR_1g069845 46.642 268 142 1 371 638 447 713 2.39e-61 218
MS.gene85423.t1 MTR_1g069845 24.848 660 389 17 39 638 18 630 6.26e-37 147
MS.gene85423.t1 MTR_1g069845 46.642 268 142 1 371 638 443 709 3.14e-61 217
MS.gene85423.t1 MTR_1g069845 24.736 663 392 17 36 638 11 626 6.32e-37 147
MS.gene85423.t1 MTR_7g116600 34.383 381 238 7 276 647 79 456 3.73e-60 208
MS.gene85423.t1 MTR_4g028960 31.111 585 364 13 86 643 93 665 5.11e-60 213
MS.gene85423.t1 MTR_3g078160 26.935 620 416 14 52 642 46 657 2.66e-58 208
MS.gene85423.t1 MTR_3g078160 26.935 620 416 14 52 642 46 657 4.74e-58 207
MS.gene85423.t1 MTR_7g097020 44.068 295 156 2 352 638 458 751 9.52e-58 208
MS.gene85423.t1 MTR_7g097020 27.759 299 196 7 54 350 36 316 2.87e-22 102
MS.gene85423.t1 MTR_4g107010 26.527 622 417 14 52 642 52 664 5.27e-55 200
MS.gene85423.t1 MTR_2g026130 39.373 287 174 0 360 646 167 453 2.13e-53 190
MS.gene85423.t1 MTR_3g078160 28.457 499 325 11 52 526 46 536 3.12e-49 181
MS.gene85423.t1 MTR_8g080280 26.501 683 386 17 67 643 38 710 1.63e-48 182
MS.gene85423.t1 MTR_1g079450 33.333 378 239 7 272 639 60 434 9.92e-47 171
MS.gene85423.t1 MTR_3g085610 25.678 701 393 19 59 646 26 711 4.66e-45 172
MS.gene85423.t1 MTR_5g034440 27.663 582 371 13 96 641 97 664 1.36e-42 164
MS.gene85423.t1 MTR_2g011140 29.032 372 249 8 281 646 21 383 1.75e-34 135
MS.gene85423.t1 MTR_4g091880 30.263 380 236 10 275 642 5 367 2.70e-33 132
MS.gene85423.t1 MTR_4g091880 28.686 373 223 12 275 642 5 339 9.12e-32 127
MS.gene85423.t1 MTR_4g085720 30.928 388 241 10 275 644 14 392 4.08e-30 123
MS.gene85423.t1 MTR_8g077205 29.080 337 176 11 60 350 31 350 1.48e-27 119
MS.gene85423.t1 MTR_5g069340 33.451 284 184 4 366 644 32 315 2.34e-27 114
MS.gene85423.t1 MTR_1g093965 30.769 247 123 5 288 534 1 199 3.42e-27 109
MS.gene85423.t1 MTR_1g093965 38.679 106 45 1 485 570 90 195 3.14e-15 75.1
MS.gene85423.t1 MTR_5g048050 26.952 397 259 13 273 641 23 416 1.61e-26 113
MS.gene85423.t1 MTR_3g106140 31.507 292 186 6 363 642 105 394 2.02e-26 114
MS.gene85423.t1 MTR_5g015210 26.178 382 239 8 275 636 67 425 3.01e-26 112
MS.gene85423.t1 MTR_3g065080 24.928 345 230 8 241 568 9 341 3.51e-26 112
MS.gene85423.t1 MTR_1g093995 30.364 247 124 5 288 534 1 199 6.60e-26 105
MS.gene85423.t1 MTR_1g093995 38.679 106 45 1 485 570 90 195 3.14e-15 75.1
MS.gene85423.t1 MTR_5g077510 23.858 394 267 13 273 641 33 418 1.60e-25 110
MS.gene85423.t1 MTR_6g071340 25.823 395 266 10 273 641 3 396 2.37e-25 109
MS.gene85423.t1 MTR_7g106340 31.098 328 179 13 275 568 8 322 9.04e-25 107
MS.gene85423.t1 MTR_3g078340 28.966 290 189 6 361 642 206 486 4.59e-24 107
MS.gene85423.t1 MTR_1g056880 27.163 416 245 15 279 644 11 418 1.58e-23 104
MS.gene85423.t1 MTR_1g056840 28.571 308 169 10 279 542 11 311 3.43e-23 102
MS.gene85423.t1 MTR_1g056870 27.208 419 241 17 279 644 11 418 3.58e-23 103
MS.gene85423.t1 MTR_6g008170 28.627 255 171 3 390 638 260 509 1.50e-22 102
MS.gene85423.t1 MTR_1g017770 25.000 380 251 9 275 636 45 408 2.37e-22 100
MS.gene85423.t1 MTR_1g014420 29.779 272 177 6 383 642 144 413 2.97e-22 101
MS.gene85423.t1 MTR_8g077205 31.527 203 97 6 184 350 42 238 5.54e-22 101
MS.gene85423.t1 MTR_3g096370 27.321 377 226 12 271 615 6 366 7.92e-22 98.6
MS.gene85423.t1 MTR_7g117890 24.838 463 303 12 90 540 76 505 2.02e-20 96.7
MS.gene85423.t1 MTR_3g115670 26.409 337 173 8 275 537 30 365 5.15e-20 95.1
MS.gene85423.t1 MTR_3g095730 24.571 350 236 11 273 600 11 354 9.44e-20 92.8
MS.gene85423.t1 MTR_5g020570 38.393 112 60 1 267 378 265 367 1.88e-19 93.2
MS.gene85423.t1 MTR_5g020570 38.393 112 60 1 267 378 280 382 2.53e-19 92.8
MS.gene85423.t1 MTR_1g056910 37.226 137 77 5 275 408 6 136 4.44e-19 90.5
MS.gene85423.t1 MTR_2g007630 32.653 245 112 8 288 530 1 194 7.47e-19 87.0
MS.gene85423.t1 MTR_8g092870 25.762 361 234 11 266 600 1 353 2.40e-18 88.2
MS.gene85423.t1 MTR_5g079550 29.242 277 179 7 379 645 31 300 2.48e-18 87.8
MS.gene85423.t1 MTR_2g087350 29.286 280 181 9 275 542 6 280 3.22e-18 87.8
MS.gene85423.t1 MTR_8g027140 24.689 482 320 14 99 545 82 555 3.61e-18 89.7
MS.gene85423.t1 MTR_8g039560 26.389 288 194 7 364 634 4 290 5.54e-18 86.3
MS.gene85423.t1 MTR_8g103227 34.868 152 90 4 224 374 352 495 1.11e-17 88.2
MS.gene85423.t1 MTR_6g004790 27.891 294 190 8 371 647 5 293 2.07e-15 78.2
MS.gene85423.t1 MTR_1g100820 44.318 88 44 1 254 341 630 712 4.30e-15 79.3
MS.gene85423.t1 MTR_1g100820 44.318 88 44 1 254 341 632 714 4.43e-15 79.3
MS.gene85423.t1 MTR_1g094025 36.752 117 51 1 442 558 186 279 5.76e-15 76.6
MS.gene85423.t1 MTR_4g051515 35.616 146 87 4 275 417 6 147 7.41e-15 77.4
MS.gene85423.t1 MTR_5g032010 35.455 110 68 1 232 341 692 798 2.96e-14 76.6
MS.gene85423.t1 MTR_8g032570 27.698 278 194 7 371 645 224 497 4.31e-14 75.9
MS.gene85423.t1 MTR_8g032570 27.698 278 194 7 371 645 201 474 4.58e-14 75.9
MS.gene85423.t1 MTR_1g090320 46.479 71 37 1 276 345 514 584 6.95e-14 75.9
MS.gene85423.t1 MTR_1g090320 46.479 71 37 1 276 345 516 586 7.02e-14 75.9
MS.gene85423.t1 MTR_7g076220 27.574 272 189 6 379 647 167 433 2.71e-13 73.2
MS.gene85423.t1 MTR_7g077780 44.286 70 39 0 276 345 827 896 5.06e-13 72.8
MS.gene85423.t1 MTR_7g005940 42.169 83 44 2 263 341 580 662 6.91e-13 72.4
MS.gene85423.t1 MTR_4g125930 42.169 83 46 2 259 341 476 556 7.23e-13 72.0
MS.gene85423.t1 MTR_7g005940 42.169 83 44 2 263 341 580 662 7.57e-13 72.4
MS.gene85423.t1 MTR_4g125930 42.169 83 46 2 259 341 676 756 8.27e-13 72.0
MS.gene85423.t1 MTR_3g096370 26.298 289 152 10 271 532 6 260 2.33e-12 68.6
MS.gene85423.t1 MTR_3g067685 30.769 247 132 8 399 644 112 320 3.23e-12 69.3
MS.gene85423.t1 MTR_2g096850 47.761 67 35 0 275 341 589 655 3.29e-12 70.1
MS.gene85423.t1 MTR_2g096850 47.761 67 35 0 275 341 740 806 3.42e-12 70.1
MS.gene85423.t1 MTR_7g007780 30.345 145 98 1 398 539 589 733 3.93e-12 70.1
MS.gene85423.t1 MTR_3g008270 39.394 99 42 4 258 341 700 795 5.45e-12 69.7
MS.gene85423.t1 MTR_3g008280 45.455 66 35 1 276 341 732 796 9.32e-12 68.9
MS.gene85423.t1 MTR_3g008280 45.455 66 35 1 276 341 740 804 9.37e-12 68.9
MS.gene85423.t1 MTR_1g076400 24.189 339 221 7 234 540 220 554 2.87e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85423.t1 AT5G42340 61.389 619 225 4 32 647 53 660 0.0 730
MS.gene85423.t1 AT3G46510 43.994 616 333 4 39 643 15 629 1.40e-168 497
MS.gene85423.t1 AT3G54850 39.389 622 355 5 33 647 20 626 1.36e-143 432
MS.gene85423.t1 AT2G28830 42.096 563 304 9 102 643 1 562 1.42e-135 409
MS.gene85423.t1 AT1G23030 37.500 624 369 9 29 646 4 612 4.84e-120 370
MS.gene85423.t1 AT1G71020 36.713 651 350 13 28 646 3 623 8.13e-113 352
MS.gene85423.t1 AT1G71020 44.703 387 205 3 269 646 89 475 7.36e-102 319
MS.gene85423.t1 AT1G29340 33.910 578 350 15 97 645 115 689 1.29e-78 265
MS.gene85423.t1 AT3G07360 37.696 382 222 9 276 644 75 453 1.47e-72 241
MS.gene85423.t1 AT2G23140 46.975 281 148 1 362 642 348 627 2.17e-67 232
MS.gene85423.t1 AT2G23140 51.220 82 40 0 269 350 35 116 1.48e-23 105
MS.gene85423.t1 AT2G23140 46.975 281 148 1 362 642 348 627 2.17e-67 232
MS.gene85423.t1 AT2G23140 51.220 82 40 0 269 350 35 116 1.48e-23 105
MS.gene85423.t1 AT2G23140 46.975 281 148 1 362 642 540 819 3.66e-66 233
MS.gene85423.t1 AT2G23140 51.220 82 40 0 269 350 227 308 1.71e-23 106
MS.gene85423.t1 AT2G23140 46.975 281 148 1 362 642 537 816 4.21e-66 233
MS.gene85423.t1 AT2G23140 51.220 82 40 0 269 350 224 305 1.81e-23 106
MS.gene85423.t1 AT2G23140 46.975 281 148 1 362 642 537 816 4.21e-66 233
MS.gene85423.t1 AT2G23140 51.220 82 40 0 269 350 224 305 1.81e-23 106
MS.gene85423.t1 AT5G01830 29.623 557 364 11 100 643 104 645 1.80e-62 220
MS.gene85423.t1 AT3G01400 39.583 288 172 2 362 647 57 344 5.82e-60 205
MS.gene85423.t1 AT5G67340 41.042 307 177 4 343 646 396 701 1.15e-58 210
MS.gene85423.t1 AT5G67340 27.649 387 246 9 275 640 240 613 1.54e-33 137
MS.gene85423.t1 AT5G67340 41.042 307 177 4 343 646 396 701 1.15e-58 210
MS.gene85423.t1 AT5G67340 27.649 387 246 9 275 640 240 613 1.54e-33 137
MS.gene85423.t1 AT3G54790 46.468 269 142 2 371 638 441 708 1.71e-56 204
MS.gene85423.t1 AT3G54790 33.146 178 97 4 186 358 123 283 5.29e-20 95.1
MS.gene85423.t1 AT3G54790 46.468 269 142 2 371 638 477 744 3.47e-56 204
MS.gene85423.t1 AT3G54790 33.146 178 97 4 186 358 159 319 6.51e-20 94.7
MS.gene85423.t1 AT3G54790 46.468 269 142 2 371 638 477 744 3.47e-56 204
MS.gene85423.t1 AT3G54790 33.146 178 97 4 186 358 159 319 6.51e-20 94.7
MS.gene85423.t1 AT1G27910 28.280 686 372 17 67 646 36 707 1.76e-55 202
MS.gene85423.t1 AT5G58680 39.033 269 163 1 376 643 71 339 8.80e-55 191
MS.gene85423.t1 AT4G16490 37.193 285 177 1 360 642 177 461 5.00e-47 173
MS.gene85423.t1 AT1G60190 27.697 621 410 19 52 641 50 662 2.56e-46 174
MS.gene85423.t1 AT3G07360 34.891 321 193 9 337 644 1 318 1.42e-45 165
MS.gene85423.t1 AT3G07360 34.891 321 193 9 337 644 1 318 1.42e-45 165
MS.gene85423.t1 AT3G07360 34.891 321 193 9 337 644 1 318 1.42e-45 165
MS.gene85423.t1 AT3G07360 34.891 321 193 9 337 644 1 318 1.42e-45 165
MS.gene85423.t1 AT3G07360 34.891 321 193 9 337 644 1 318 1.42e-45 165
MS.gene85423.t1 AT3G07360 34.891 321 193 9 337 644 1 318 1.42e-45 165
MS.gene85423.t1 AT3G07360 34.891 321 193 9 337 644 1 318 1.42e-45 165
MS.gene85423.t1 AT3G07360 34.891 321 193 9 337 644 1 318 1.42e-45 165
MS.gene85423.t1 AT3G07360 34.891 321 193 9 337 644 1 318 1.42e-45 165
MS.gene85423.t1 AT5G18320 31.771 384 240 8 275 643 72 448 2.15e-45 168
MS.gene85423.t1 AT1G24330 25.404 681 392 17 67 642 36 705 4.05e-44 169
MS.gene85423.t1 AT1G24330 25.404 681 392 17 67 642 36 705 4.05e-44 169
MS.gene85423.t1 AT1G67530 25.470 691 388 19 67 646 36 710 2.20e-41 161
MS.gene85423.t1 AT1G67530 25.470 691 388 19 67 646 36 710 2.20e-41 161
MS.gene85423.t1 AT1G67530 25.470 691 388 19 67 646 36 710 2.20e-41 161
MS.gene85423.t1 AT4G21350 33.243 367 235 7 275 638 5 364 1.13e-40 152
MS.gene85423.t1 AT1G10560 26.125 578 384 15 100 641 103 673 2.90e-40 157
MS.gene85423.t1 AT3G19380 30.570 386 239 10 262 625 1 379 2.38e-37 144
MS.gene85423.t1 AT1G49780 29.512 410 253 10 262 644 1 401 4.57e-35 138
MS.gene85423.t1 AT1G67530 30.149 335 184 8 67 366 36 355 7.84e-35 139
MS.gene85423.t1 AT5G18330 28.212 397 241 13 275 643 65 445 8.14e-31 126
MS.gene85423.t1 AT5G18340 30.931 333 206 12 270 585 69 394 8.51e-29 120
MS.gene85423.t1 AT5G62560 31.496 254 167 3 390 638 258 509 7.02e-27 115
MS.gene85423.t1 AT5G40140 29.603 277 187 4 371 642 233 506 5.11e-26 113
MS.gene85423.t1 AT5G65920 27.346 373 246 9 275 636 60 418 1.51e-25 110
MS.gene85423.t1 AT5G65920 27.346 373 246 9 275 636 60 418 1.51e-25 110
MS.gene85423.t1 AT1G66160 28.141 398 237 17 273 643 31 406 4.06e-25 108
MS.gene85423.t1 AT5G65200 29.153 295 193 5 359 642 220 509 6.99e-24 106
MS.gene85423.t1 AT2G35930 27.597 308 202 10 275 567 12 313 7.58e-24 105
MS.gene85423.t1 AT4G31890 30.741 270 170 7 386 642 163 428 1.47e-23 105
MS.gene85423.t1 AT4G31890 30.741 270 170 7 386 642 163 428 1.47e-23 105
MS.gene85423.t1 AT4G31890 30.741 270 170 7 386 642 163 428 1.47e-23 105
MS.gene85423.t1 AT5G37490 24.873 394 260 13 273 641 29 411 3.17e-21 97.4
MS.gene85423.t1 AT3G49810 25.203 369 259 7 275 636 64 422 3.80e-21 97.4
MS.gene85423.t1 AT4G12710 31.884 276 177 8 379 644 58 332 5.41e-21 96.3
MS.gene85423.t1 AT4G12710 28.231 294 190 9 368 647 92 378 2.86e-17 85.1
MS.gene85423.t1 AT1G76390 28.571 315 189 8 275 555 25 337 7.71e-21 97.8
MS.gene85423.t1 AT1G76390 28.571 315 189 8 275 555 25 337 7.71e-21 97.8
MS.gene85423.t1 AT3G52450 41.860 129 68 4 275 401 7 130 1.24e-20 95.5
MS.gene85423.t1 AT1G20780 28.125 320 184 9 275 555 23 335 2.11e-20 96.7
MS.gene85423.t1 AT1G20780 28.125 320 184 9 275 555 23 335 2.11e-20 96.7
MS.gene85423.t1 AT1G20780 28.125 320 184 9 275 555 23 335 2.11e-20 96.7
MS.gene85423.t1 AT3G47820 33.040 227 142 4 424 642 263 487 9.35e-20 93.6
MS.gene85423.t1 AT5G09800 24.638 345 230 10 275 600 11 344 1.71e-19 91.7
MS.gene85423.t1 AT3G18710 27.077 325 204 13 267 568 1 315 3.80e-19 90.9
MS.gene85423.t1 AT2G25130 28.464 267 173 7 390 642 133 395 5.71e-19 90.9
MS.gene85423.t1 AT4G36550 26.027 292 190 7 60 349 26 293 7.83e-19 91.3
MS.gene85423.t1 AT5G14510 31.930 285 179 9 366 642 2 279 2.38e-18 87.0
MS.gene85423.t1 AT5G64660 25.597 293 173 10 273 556 8 264 2.29e-17 85.5
MS.gene85423.t1 AT1G08315 24.667 300 205 9 362 641 3 301 7.32e-17 82.8
MS.gene85423.t1 AT3G03440 29.213 267 180 4 386 645 84 348 1.46e-16 82.8
MS.gene85423.t1 AT2G45920 50.000 66 33 0 276 341 326 391 3.20e-16 81.6
MS.gene85423.t1 AT1G01680 50.000 72 35 1 278 348 236 307 4.32e-16 80.1
MS.gene85423.t1 AT3G61390 50.000 66 33 0 276 341 279 344 3.51e-15 78.2
MS.gene85423.t1 AT3G61390 50.000 66 33 0 276 341 354 419 5.32e-15 78.2
MS.gene85423.t1 AT3G11840 51.389 72 33 2 275 345 10 80 8.54e-15 77.8
MS.gene85423.t1 AT1G56040 53.846 65 30 0 276 340 354 418 1.25e-14 77.0
MS.gene85423.t1 AT3G60350 34.307 137 87 1 406 539 599 735 1.28e-14 78.2
MS.gene85423.t1 AT3G60350 34.307 137 87 1 406 539 599 735 1.28e-14 78.2
MS.gene85423.t1 AT2G45910 44.304 79 44 0 267 345 755 833 2.61e-14 77.0
MS.gene85423.t1 AT2G45910 44.304 79 44 0 267 345 755 833 2.61e-14 77.0
MS.gene85423.t1 AT1G01660 33.333 138 67 3 222 346 444 569 2.74e-14 76.6
MS.gene85423.t1 AT1G01660 33.333 138 67 3 222 346 443 568 2.93e-14 76.6
MS.gene85423.t1 AT2G44900 32.432 148 96 2 396 539 597 744 4.52e-14 76.3
MS.gene85423.t1 AT2G44900 32.432 148 96 2 396 539 597 744 4.52e-14 76.3
MS.gene85423.t1 AT1G66160 24.874 398 234 18 273 643 31 390 1.11e-13 73.9
MS.gene85423.t1 AT5G65500 35.036 137 72 3 212 341 655 781 1.31e-13 74.7
MS.gene85423.t1 AT5G65500 35.036 137 72 3 212 341 663 789 1.37e-13 74.7
MS.gene85423.t1 AT1G56030 46.154 65 35 0 276 340 324 388 9.94e-13 70.9
MS.gene85423.t1 AT5G51270 42.857 70 39 1 276 345 736 804 1.79e-12 71.2
MS.gene85423.t1 AT5G51270 42.857 70 39 1 276 345 736 804 1.79e-12 71.2
MS.gene85423.t1 AT2G19410 40.476 84 49 1 264 347 700 782 4.42e-12 69.7
MS.gene85423.t1 AT5G57035 45.455 66 36 0 276 341 709 774 4.70e-12 69.7
MS.gene85423.t1 AT2G19410 42.308 78 44 1 264 341 735 811 4.76e-12 69.7
MS.gene85423.t1 AT2G19410 40.476 84 49 1 264 347 714 796 5.16e-12 69.7
MS.gene85423.t1 AT2G45720 26.296 270 191 4 379 646 162 425 1.03e-11 68.2
MS.gene85423.t1 AT2G45720 26.296 270 191 4 379 646 162 425 1.03e-11 68.2
MS.gene85423.t1 AT2G45720 26.296 270 191 4 379 646 162 425 1.03e-11 68.2
MS.gene85423.t1 AT2G45720 26.296 270 191 4 379 646 162 425 1.03e-11 68.2
MS.gene85423.t1 AT2G45720 26.296 270 191 4 379 646 162 425 1.03e-11 68.2
MS.gene85423.t1 AT5G61560 31.667 120 65 3 225 341 683 788 2.34e-11 67.4
MS.gene85423.t1 AT3G49060 45.455 66 36 0 276 341 726 791 2.34e-11 67.4
MS.gene85423.t1 AT3G49060 45.455 66 36 0 276 341 736 801 2.42e-11 67.4
MS.gene85423.t1 AT5G61560 31.667 120 65 3 225 341 685 790 2.42e-11 67.4
MS.gene85423.t1 AT5G61560 31.667 120 65 3 225 341 685 790 2.42e-11 67.4
MS.gene85423.t1 AT5G61560 31.667 120 65 3 225 341 704 809 2.47e-11 67.4
MS.gene85423.t1 AT5G61560 31.667 120 65 3 225 341 704 809 2.47e-11 67.4
MS.gene85423.t1 AT3G49060 45.455 66 36 0 276 341 703 768 2.56e-11 67.4
MS.gene85423.t1 AT5G50900 28.488 172 121 1 371 540 149 320 3.86e-11 66.6
MS.gene85423.t1 AT4G25160 41.026 78 43 2 264 341 757 831 4.69e-11 66.6
MS.gene85423.t1 AT1G68940 25.641 234 148 6 266 491 288 503 5.95e-11 66.2
MS.gene85423.t1 AT1G68940 25.641 234 148 6 266 491 235 450 6.22e-11 66.2
MS.gene85423.t1 AT1G68940 25.641 234 148 6 266 491 288 503 6.83e-11 66.2

Find 112 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACATAATTTCAAGTGTTAT+TGG 0.211508 7.3:+28797765 None:intergenic
CAAACACATGTTGCCTCTTA+TGG 0.212487 7.3:-28799125 MS.gene85423:CDS
CCAAACATGGAATTTCTTCT+TGG 0.230264 7.3:+28797021 None:intergenic
AGCTTTACTTCAATTGTTAA+AGG 0.235604 7.3:-28796511 MS.gene85423:CDS
GCTGCACATTCTTTGTTCTT+TGG 0.245422 7.3:+28796357 None:intergenic
CCAAGAAGAAATTCCATGTT+TGG 0.295569 7.3:-28797021 MS.gene85423:CDS
ATAATAGAAGTATTGGAAAA+TGG 0.315105 7.3:-28796753 MS.gene85423:CDS
TGTAATAAATTTACCAAAGC+TGG 0.326531 7.3:+28796636 None:intergenic
TTGGTAAATTTATTACAAAA+TGG 0.326549 7.3:-28796630 MS.gene85423:CDS
GCTTGGAAGAAGCACTTCTT+TGG 0.328604 7.3:-28797811 MS.gene85423:CDS
CTTCTTCCAAGCATCTTATT+AGG 0.336614 7.3:+28797822 None:intergenic
TTCCTCGAAACGGCGTTGTT+TGG 0.340973 7.3:-28799075 MS.gene85423:CDS
TTACAAAATGGAACAGTTAG+AGG 0.342439 7.3:-28796618 MS.gene85423:CDS
CCAACCTCATGCCTCCCTTC+AGG 0.349557 7.3:+28796429 None:intergenic
GTCAAATGGGATTCCAGCTT+TGG 0.350357 7.3:-28796649 MS.gene85423:CDS
TTCAGCAATTAAATTTCTTA+AGG 0.357358 7.3:+28797115 None:intergenic
CGAAGAAAAGCGCATCTCTA+AGG 0.359752 7.3:+28799044 None:intergenic
GGTGTGCCTTGTGATGAATT+AGG 0.367708 7.3:-28798724 MS.gene85423:CDS
GTGTGCCTTGTGATGAATTA+GGG 0.381169 7.3:-28798723 MS.gene85423:CDS
TCCGAAGACAAGGCAGCCTT+TGG 0.394785 7.3:-28797165 MS.gene85423:CDS
GAGGTTGTAGGAATGTCAAA+TGG 0.401695 7.3:-28796663 MS.gene85423:CDS
AACCAAACAACGCCGTTTCG+AGG 0.411594 7.3:+28799073 None:intergenic
AAATTTCTTAAGGCACAGTT+TGG 0.411871 7.3:+28797125 None:intergenic
TGGCCACTTGCAATAATAAC+AGG 0.415456 7.3:+28797738 None:intergenic
ACTTTGGCAGCACTTCAGTT+TGG 0.417472 7.3:-28796294 MS.gene85423:CDS
ATCGAATCGGTGGTTCAATT+CGG 0.419143 7.3:-28799199 MS.gene85423:CDS
TCCAAAGGCTGCCTTGTCTT+CGG 0.419783 7.3:+28797164 None:intergenic
ACAACGCCGTTTCGAGGAAC+AGG 0.427957 7.3:+28799079 None:intergenic
TCCAATACTTCTATTATAGC+AGG 0.428508 7.3:+28796759 None:intergenic
GATGAAAATAAAGAGGTTGT+AGG 0.431054 7.3:-28796675 MS.gene85423:CDS
TAGCTCTCTCTTTATTTGCA+TGG 0.433322 7.3:+28796553 None:intergenic
ATTGTTAAAGGACAGAAACT+TGG 0.435496 7.3:-28796499 MS.gene85423:CDS
GCCATGCCTAATAAGATGCT+TGG 0.439094 7.3:-28797828 MS.gene85423:CDS
CTTGTTGAGTTTACTAGAGA+AGG 0.448455 7.3:-28796384 MS.gene85423:CDS
CCACCGATTCGATGAGTCCT+TGG 0.449883 7.3:+28799209 None:intergenic
TCCTGCTATAATAGAAGTAT+TGG 0.451779 7.3:-28796760 MS.gene85423:CDS
TTCTGATGAAGTAAAAGAAC+AGG 0.452149 7.3:-28798698 MS.gene85423:intron
TAAGAAATTTAATTGCTGAA+TGG 0.452536 7.3:-28797112 MS.gene85423:CDS
CAATGGTGTGGTGGTGGTGG+AGG 0.458616 7.3:-28799236 MS.gene85423:CDS
ATGCAATGGTGTGGTGGTGG+TGG 0.460589 7.3:-28799239 MS.gene85423:CDS
AACCTTGTTAGAGAAAGAAA+AGG 0.469867 7.3:-28797951 MS.gene85423:CDS
CTACTTGTGTTGACTCCTGA+AGG 0.474106 7.3:-28796444 MS.gene85423:CDS
GAAACGGCGTTGTTTGGTTG+AGG 0.484598 7.3:-28799069 MS.gene85423:CDS
CCTTTCGATAATGGCACTAT+CGG 0.487902 7.3:+28798037 None:intergenic
GAGGTAGAAACATTGGCTGT+TGG 0.489533 7.3:-28797975 MS.gene85423:CDS
AAAGAGAGAGCTATAAAAGC+TGG 0.489962 7.3:-28796543 MS.gene85423:CDS
AGGCTGCCTTGTCTTCGGAC+AGG 0.490475 7.3:+28797169 None:intergenic
TATGATAGGATTTGTACTAA+TGG 0.494085 7.3:+28796879 None:intergenic
AGCTAATGCACGTGCAACTC+AGG 0.495077 7.3:-28798145 MS.gene85423:CDS
TGTTATTATTGCAAGTGGCC+AGG 0.495390 7.3:-28797736 MS.gene85423:intron
TCCAAGCATCTTATTAGGCA+TGG 0.497480 7.3:+28797827 None:intergenic
TTGATTGAGATTAAAGAAAG+TGG 0.499336 7.3:-28796258 MS.gene85423:CDS
TCACGAAGGTCTTCCATAAG+AGG 0.499928 7.3:+28799112 None:intergenic
ACCTTCTTAACAGATTCAAA+AGG 0.513046 7.3:-28797896 MS.gene85423:CDS
AGGTTGTAGGAATGTCAAAT+GGG 0.515034 7.3:-28796662 MS.gene85423:CDS
AATGATTGATGAAAATAAAG+AGG 0.519990 7.3:-28796682 MS.gene85423:CDS
AACAGATTCAAAAGGACTGC+AGG 0.520736 7.3:-28797888 MS.gene85423:CDS
AGAGCTAGCAATGGATATGA+TGG 0.525717 7.3:-28798090 MS.gene85423:CDS
ATTGGAAAATGGAAGTATTG+TGG 0.526480 7.3:-28796742 MS.gene85423:CDS
ATTCAAAAGGACTGCAGGCA+TGG 0.529095 7.3:-28797883 MS.gene85423:CDS
TCCATCAAAGACATATGAAA+GGG 0.529147 7.3:-28797228 MS.gene85423:intron
TTGTTGAGTTTACTAGAGAA+GGG 0.533693 7.3:-28796383 MS.gene85423:CDS
TTCCATCAAAGACATATGAA+AGG 0.536197 7.3:-28797229 MS.gene85423:intron
TACAAAATGGAACAGTTAGA+GGG 0.549728 7.3:-28796617 MS.gene85423:CDS
CAACTTAGAACATCAAAGAA+AGG 0.556469 7.3:-28796979 MS.gene85423:CDS
GTTCTAAGTTGATCGACGAT+AGG 0.558574 7.3:+28796991 None:intergenic
TTAGGCATGGGAAGGTGAGA+TGG 0.558729 7.3:-28798797 MS.gene85423:intron
AGAATGCAATGGTGTGGTGG+TGG 0.564838 7.3:-28799242 MS.gene85423:CDS
GATCCAAGGACTCATCGAAT+CGG 0.565695 7.3:-28799212 MS.gene85423:CDS
TTGTTAAAGGACAGAAACTT+GGG 0.566313 7.3:-28796498 MS.gene85423:CDS
CGTCATCCTGTTCCTCGAAA+CGG 0.567042 7.3:-28799085 MS.gene85423:CDS
ACCTTGTTAGAGAAAGAAAA+GGG 0.568955 7.3:-28797950 MS.gene85423:CDS
GATCCTGTTATTATTGCAAG+TGG 0.569659 7.3:-28797741 MS.gene85423:CDS
GGATCTTGAGGTAGAAACAT+TGG 0.571196 7.3:-28797982 MS.gene85423:CDS
AATGGAAGGAACAGAAGAGA+GGG 0.575343 7.3:-28799317 MS.gene85423:CDS
GGTTATGATCAAATTTCAGA+AGG 0.576249 7.3:-28798776 MS.gene85423:CDS
CCTGAAGGGAGGCATGAGGT+TGG 0.577701 7.3:-28796429 MS.gene85423:CDS
TTGTTGAAATTGTGTAGCCA+AGG 0.579205 7.3:-28799013 MS.gene85423:CDS
GATAGGATTTGTACTAATGG+TGG 0.579251 7.3:+28796882 None:intergenic
TCACAGTGTTGAGGATCTTG+AGG 0.580007 7.3:-28797994 MS.gene85423:CDS
ACGTGCAACTCAGGAGGGCA+AGG 0.580025 7.3:-28798136 MS.gene85423:CDS
AAGGCACACCATCAAAAGCT+TGG 0.581211 7.3:+28798737 None:intergenic
AACAGGTGACTTTCAATGGA+AGG 0.586665 7.3:-28799331 None:intergenic
ACAAAACCTGTCCGAAGACA+AGG 0.586908 7.3:-28797175 MS.gene85423:CDS
GGAAGGAACAGAAGAGAGGG+AGG 0.596520 7.3:-28799314 MS.gene85423:CDS
TACTTGTGTTGACTCCTGAA+GGG 0.600412 7.3:-28796443 MS.gene85423:CDS
GTTGGAGCTTCACAGTGTTG+AGG 0.602329 7.3:-28798003 MS.gene85423:CDS
TAATGCACGTGCAACTCAGG+AGG 0.604700 7.3:-28798142 MS.gene85423:CDS
TGTGTTTGAAACGACGAGCG+AGG 0.614739 7.3:+28799140 None:intergenic
AAAGGGAAAGCATAGAGAAG+TGG 0.617041 7.3:-28797211 MS.gene85423:CDS
CCGATAGTGCCATTATCGAA+AGG 0.622407 7.3:-28798037 MS.gene85423:CDS
CAATGGAAGGAACAGAAGAG+AGG 0.623216 7.3:-28799318 MS.gene85423:CDS
AGAACCTGAACCAAGCAACC+CGG 0.629178 7.3:-28799284 MS.gene85423:CDS
CCAAGGACTCATCGAATCGG+TGG 0.636194 7.3:-28799209 MS.gene85423:CDS
AGAAGAATGCAATGGTGTGG+TGG 0.641470 7.3:-28799245 MS.gene85423:CDS
ACAAGACATAGAGCTAGCAA+TGG 0.643295 7.3:-28798099 MS.gene85423:CDS
AATGCACGTGCAACTCAGGA+GGG 0.649570 7.3:-28798141 MS.gene85423:CDS
GTGGTGGTGGAGGAGATCCA+AGG 0.649832 7.3:-28799226 MS.gene85423:CDS
ATCATCATCAAAGATAACAT+CGG 0.668304 7.3:+28797854 None:intergenic
AATGAAGAAGAAGAATGCAA+TGG 0.671502 7.3:-28799253 MS.gene85423:CDS
GCTAATTGAAGATGTTCCAA+AGG 0.672940 7.3:+28797149 None:intergenic
GAAATCCCTAATTCATCACA+AGG 0.673692 7.3:+28798718 None:intergenic
TTGTGTTGACTCCTGAAGGG+AGG 0.680618 7.3:-28796440 MS.gene85423:CDS
CAGGATGACGAAGGTCACGA+AGG 0.687204 7.3:+28799098 None:intergenic
GACTCCTGAAGGGAGGCATG+AGG 0.693867 7.3:-28796433 MS.gene85423:CDS
ATTGGACACAGAAACTCATG+AGG 0.705096 7.3:+28797783 None:intergenic
TTCGAGGAACAGGATGACGA+AGG 0.707878 7.3:+28799089 None:intergenic
GTGGTACAAATAGAGCACAA+AGG 0.710749 7.3:-28796239 MS.gene85423:CDS
CTTAGAACATCAAAGAAAGG+CGG 0.713277 7.3:-28796976 MS.gene85423:CDS
GCTAGCAATGGATATGATGG+TGG 0.719121 7.3:-28798087 MS.gene85423:CDS
AGAAGAAGAATGCAATGGTG+TGG 0.735055 7.3:-28799248 MS.gene85423:CDS
GCGAATACAGAAGAACACAA+AGG 0.740376 7.3:-28799177 MS.gene85423:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACTTATATCAAAAGA+AGG - chr7.3:28798718-28798737 MS.gene85423:CDS 15.0%
!! TCAATATATAATTATGTCTA+TGG - chr7.3:28796907-28796926 MS.gene85423:CDS 15.0%
!! TGAAATAATGTTATATACTT+TGG - chr7.3:28797325-28797344 MS.gene85423:intron 15.0%
!! TTCGTATTATAAATTTGATT+CGG - chr7.3:28797962-28797981 MS.gene85423:CDS 15.0%
!! TTGGTAAATTTATTACAAAA+TGG - chr7.3:28798877-28798896 MS.gene85423:intron 15.0%
!! AAATGTGTAATTATTAAGAG+CGG + chr7.3:28797111-28797130 None:intergenic 20.0%
!! AATGATTGATGAAAATAAAG+AGG - chr7.3:28798825-28798844 MS.gene85423:intron 20.0%
!! ACTAGTCATATTTATGAAAA+TGG - chr7.3:28797860-28797879 MS.gene85423:CDS 20.0%
!! CTATATAATAATGCTAACAA+AGG - chr7.3:28798218-28798237 MS.gene85423:intron 20.0%
!! TAAGAAATTTAATTGCTGAA+TGG - chr7.3:28798395-28798414 MS.gene85423:intron 20.0%
!! TTCAGCAATTAAATTTCTTA+AGG + chr7.3:28798395-28798414 None:intergenic 20.0%
!!! AAGTAATTCATCTTTTACTT+TGG - chr7.3:28799197-28799216 MS.gene85423:CDS 20.0%
!!! AATTGAATAACTGAAGTATT+TGG - chr7.3:28797166-28797185 MS.gene85423:CDS 20.0%
!!! ATAATAGAAGTATTGGAAAA+TGG - chr7.3:28798754-28798773 MS.gene85423:CDS 20.0%
!!! CAATTTTAGATCTCATAAAA+AGG - chr7.3:28799301-28799320 MS.gene85423:CDS 20.0%
!!! TCTATGATTTCTCTTTTTTA+AGG - chr7.3:28796609-28796628 MS.gene85423:CDS 20.0%
!!! TGATTATGTTTTGATGAATA+GGG - chr7.3:28796659-28796678 MS.gene85423:CDS 20.0%
!!! TGTTCTTTTATTTTTGAATC+TGG + chr7.3:28798655-28798674 None:intergenic 20.0%
!!! TTGATTATGTTTTGATGAAT+AGG - chr7.3:28796658-28796677 MS.gene85423:CDS 20.0%
! AGCTTTACTTCAATTGTTAA+AGG - chr7.3:28798996-28799015 MS.gene85423:intron 25.0%
! ATCATCATCAAAGATAACAT+CGG + chr7.3:28797656-28797675 None:intergenic 25.0%
! ATTTCTCACTCTTAATCTAA+CGG - chr7.3:28798096-28798115 MS.gene85423:CDS 25.0%
! GCTCTTAATAATTACACATT+TGG - chr7.3:28797110-28797129 MS.gene85423:CDS 25.0%
! TATGATAGGATTTGTACTAA+TGG + chr7.3:28798631-28798650 None:intergenic 25.0%
! TATTGAATAACTGGTGTATT+TGG + chr7.3:28797205-28797224 None:intergenic 25.0%
! TGTAATAAATTTACCAAAGC+TGG + chr7.3:28798874-28798893 None:intergenic 25.0%
! TTGATTGAGATTAAAGAAAG+TGG - chr7.3:28799249-28799268 MS.gene85423:CDS 25.0%
! TTGTAGGTTTATTGAATAAC+TGG + chr7.3:28797214-28797233 None:intergenic 25.0%
!! GACATAATTTCAAGTGTTAT+TGG + chr7.3:28797745-28797764 None:intergenic 25.0%
!! TTTTTGAATCTGGATATGAT+AGG + chr7.3:28798645-28798664 None:intergenic 25.0%
!!! AACTTTCTTTTGATAACATG+CGG + chr7.3:28798567-28798586 None:intergenic 25.0%
!!! AAGTTTGTTTGTTATTTACG+AGG + chr7.3:28796532-28796551 None:intergenic 25.0%
!!! TTCTTTTTTTCTTGCGTTTT+AGG - chr7.3:28796692-28796711 MS.gene85423:CDS 25.0%
AAATTTCTTAAGGCACAGTT+TGG + chr7.3:28798385-28798404 None:intergenic 30.0%
AACCTTGTTAGAGAAAGAAA+AGG - chr7.3:28797556-28797575 MS.gene85423:intron 30.0%
AATGAAGAAGAAGAATGCAA+TGG - chr7.3:28796254-28796273 MS.gene85423:CDS 30.0%
AATGCATGTATTTGTGAATG+CGG + chr7.3:28796975-28796994 None:intergenic 30.0%
ACCTTCTTAACAGATTCAAA+AGG - chr7.3:28797611-28797630 MS.gene85423:intron 30.0%
ACCTTGTTAGAGAAAGAAAA+GGG - chr7.3:28797557-28797576 MS.gene85423:intron 30.0%
ATTGTTAAAGGACAGAAACT+TGG - chr7.3:28799008-28799027 MS.gene85423:CDS 30.0%
CAACTTAGAACATCAAAGAA+AGG - chr7.3:28798528-28798547 MS.gene85423:intron 30.0%
GATGAAAATAAAGAGGTTGT+AGG - chr7.3:28798832-28798851 MS.gene85423:intron 30.0%
GGTTATGATCAAATTTCAGA+AGG - chr7.3:28796731-28796750 MS.gene85423:CDS 30.0%
TACAAAATGGAACAGTTAGA+GGG - chr7.3:28798890-28798909 MS.gene85423:intron 30.0%
TCCAATACTTCTATTATAGC+AGG + chr7.3:28798751-28798770 None:intergenic 30.0%
TCCATCAAAGACATATGAAA+GGG - chr7.3:28798279-28798298 MS.gene85423:intron 30.0%
TCGTTGCTTATAATAGTGAT+CGG - chr7.3:28797241-28797260 MS.gene85423:intron 30.0%
TTACAAAATGGAACAGTTAG+AGG - chr7.3:28798889-28798908 MS.gene85423:intron 30.0%
TTCCATCAAAGACATATGAA+AGG - chr7.3:28798278-28798297 MS.gene85423:intron 30.0%
TTCTGATGAAGTAAAAGAAC+AGG - chr7.3:28796809-28796828 MS.gene85423:CDS 30.0%
TTGTTAAAGGACAGAAACTT+GGG - chr7.3:28799009-28799028 MS.gene85423:CDS 30.0%
TTGTTGAGTTTACTAGAGAA+GGG - chr7.3:28799124-28799143 MS.gene85423:CDS 30.0%
TTTCACATTTAAGCCTAAGT+TGG - chr7.3:28797831-28797850 MS.gene85423:CDS 30.0%
! AAATTAAGCCAAGCTTTTGA+TGG - chr7.3:28796762-28796781 MS.gene85423:CDS 30.0%
! ATCTGGAATGAAGAAAACTT+AGG - chr7.3:28798187-28798206 MS.gene85423:intron 30.0%
! TCCTGCTATAATAGAAGTAT+TGG - chr7.3:28798747-28798766 MS.gene85423:CDS 30.0%
! TCCTTTTGAATCTGTTAAGA+AGG + chr7.3:28797615-28797634 None:intergenic 30.0%
! TCTTCTTCATTCTCATTTTC+CGG + chr7.3:28796245-28796264 None:intergenic 30.0%
! TGACATGAAGAACAGATTTT+TGG + chr7.3:28798445-28798464 None:intergenic 30.0%
! TTATGAAAATGGATTCGATG+CGG - chr7.3:28797871-28797890 MS.gene85423:CDS 30.0%
!! AAGCAACGAATCATTTTTGT+AGG + chr7.3:28797230-28797249 None:intergenic 30.0%
!! ATTGGAAAATGGAAGTATTG+TGG - chr7.3:28798765-28798784 MS.gene85423:CDS 30.0%
!! TGGAATTTCTTCTTGGTTTT+CGG + chr7.3:28798482-28798501 None:intergenic 30.0%
!!! ATGGAACCCTTATTTTATTC+CGG - chr7.3:28796926-28796945 MS.gene85423:CDS 30.0%
AAAGAGAGAGCTATAAAAGC+TGG - chr7.3:28798964-28798983 MS.gene85423:intron 35.0%
ACCTTGCCGGAATAAAATAA+GGG + chr7.3:28796935-28796954 None:intergenic 35.0%
ACTACTAGCAACATAGTGAT+CGG + chr7.3:28797280-28797299 None:intergenic 35.0%
ACTGTTGCATACATATTGGA+CGG - chr7.3:28797926-28797945 MS.gene85423:CDS 35.0%
AGGTTGTAGGAATGTCAAAT+GGG - chr7.3:28798845-28798864 MS.gene85423:intron 35.0%
CACAAATACATGCATTCACA+TGG - chr7.3:28796979-28796998 MS.gene85423:CDS 35.0%
CCAAACATGGAATTTCTTCT+TGG + chr7.3:28798489-28798508 None:intergenic 35.0%
CCAAGAAGAAATTCCATGTT+TGG - chr7.3:28798486-28798505 MS.gene85423:intron 35.0%
CTTAGAACATCAAAGAAAGG+CGG - chr7.3:28798531-28798550 MS.gene85423:intron 35.0%
CTTCTTCCAAGCATCTTATT+AGG + chr7.3:28797688-28797707 None:intergenic 35.0%
CTTGTTGAGTTTACTAGAGA+AGG - chr7.3:28799123-28799142 MS.gene85423:CDS 35.0%
GAAATCCCTAATTCATCACA+AGG + chr7.3:28796792-28796811 None:intergenic 35.0%
GAACTTAATTCGTGATTACC+TGG + chr7.3:28797792-28797811 None:intergenic 35.0%
GACTAGTATCTTTCCAACTT+AGG + chr7.3:28797847-28797866 None:intergenic 35.0%
GATAGGATTTGTACTAATGG+TGG + chr7.3:28798628-28798647 None:intergenic 35.0%
GATCCTGTTATTATTGCAAG+TGG - chr7.3:28797766-28797785 MS.gene85423:CDS 35.0%
GCTAATTGAAGATGTTCCAA+AGG + chr7.3:28798361-28798380 None:intergenic 35.0%
TCCAATCTTTATCCAACAGT+CGG - chr7.3:28798005-28798024 MS.gene85423:CDS 35.0%
TCCCTTTCATATGTCTTTGA+TGG + chr7.3:28798283-28798302 None:intergenic 35.0%
TTGTTGAAATTGTGTAGCCA+AGG - chr7.3:28796494-28796513 MS.gene85423:CDS 35.0%
! CTTCTTCATTCTCATTTTCC+GGG + chr7.3:28796244-28796263 None:intergenic 35.0%
! GATAGGTTTTCAACCAAACA+TGG + chr7.3:28798502-28798521 None:intergenic 35.0%
! TAGCTCTCTCTTTATTTGCA+TGG + chr7.3:28798957-28798976 None:intergenic 35.0%
! TCCCTTTTCTTTCTCTAACA+AGG + chr7.3:28797561-28797580 None:intergenic 35.0%
! TTTTGCAAGCCTTTCGATAA+TGG + chr7.3:28797482-28797501 None:intergenic 35.0%
!! AGAATTTTAGTCGCCGAAAA+CGG - chr7.3:28798595-28798614 MS.gene85423:intron 35.0%
!! ATCTGCTTGTTTTCTACATC+TGG + chr7.3:28797018-28797037 None:intergenic 35.0%
!! ATTTCTTCTTGGTTTTCGGT+TGG + chr7.3:28798478-28798497 None:intergenic 35.0%
!! TTCTGAAATCCAATCCTCTA+CGG - chr7.3:28798038-28798057 MS.gene85423:CDS 35.0%
!! TTTTCTTGCGTTTTAGGCAT+GGG - chr7.3:28796698-28796717 MS.gene85423:CDS 35.0%
!! TTTTTCTTGCGTTTTAGGCA+TGG - chr7.3:28796697-28796716 MS.gene85423:CDS 35.0%
AACAGATTCAAAAGGACTGC+AGG - chr7.3:28797619-28797638 MS.gene85423:intron 40.0%
ACAAGACATAGAGCTAGCAA+TGG - chr7.3:28797408-28797427 MS.gene85423:intron 40.0%
AGAAGAAGAATGCAATGGTG+TGG - chr7.3:28796259-28796278 MS.gene85423:CDS 40.0%
AGAGCTAGCAATGGATATGA+TGG - chr7.3:28797417-28797436 MS.gene85423:intron 40.0%
AGGCCAAAATCCACAAACTT+CGG + chr7.3:28798160-28798179 None:intergenic 40.0%
ATCGAATCGGTGGTTCAATT+CGG - chr7.3:28796308-28796327 MS.gene85423:CDS 40.0%
ATTGGACACAGAAACTCATG+AGG + chr7.3:28797727-28797746 None:intergenic 40.0%
CAAACACATGTTGCCTCTTA+TGG - chr7.3:28796382-28796401 MS.gene85423:CDS 40.0%
CACCTTGCCGGAATAAAATA+AGG + chr7.3:28796936-28796955 None:intergenic 40.0%
CATTCGTGCAATTTGCACAT+TGG + chr7.3:28797057-28797076 None:intergenic 40.0%
CGAAAGGCTTGCAAAAAAGT+TGG - chr7.3:28797486-28797505 MS.gene85423:intron 40.0%
CTCGACTGTTGCATACATAT+TGG - chr7.3:28797922-28797941 MS.gene85423:CDS 40.0%
CTTCATTCCAGATTCTCGAA+AGG + chr7.3:28798180-28798199 None:intergenic 40.0%
GAGGTTGTAGGAATGTCAAA+TGG - chr7.3:28798844-28798863 MS.gene85423:intron 40.0%
GCGAATACAGAAGAACACAA+AGG - chr7.3:28796330-28796349 MS.gene85423:CDS 40.0%
GCTGCACATTCTTTGTTCTT+TGG + chr7.3:28799153-28799172 None:intergenic 40.0%
GGATCTTGAGGTAGAAACAT+TGG - chr7.3:28797525-28797544 MS.gene85423:intron 40.0%
GTGGTACAAATAGAGCACAA+AGG - chr7.3:28799268-28799287 MS.gene85423:CDS 40.0%
GTGTGCCTTGTGATGAATTA+GGG - chr7.3:28796784-28796803 MS.gene85423:CDS 40.0%
TCCAAGCATCTTATTAGGCA+TGG + chr7.3:28797683-28797702 None:intergenic 40.0%
TCCGACTGTTGGATAAAGAT+TGG + chr7.3:28798009-28798028 None:intergenic 40.0%
TGGCCACTTGCAATAATAAC+AGG + chr7.3:28797772-28797791 None:intergenic 40.0%
TGTTATTATTGCAAGTGGCC+AGG - chr7.3:28797771-28797790 MS.gene85423:CDS 40.0%
TTTGTGAATGCGGTGTATTG+CGG + chr7.3:28796965-28796984 None:intergenic 40.0%
! AAAGGGAAAGCATAGAGAAG+TGG - chr7.3:28798296-28798315 MS.gene85423:intron 40.0%
! ATTTGCACATTGGTGGTTGT+TGG + chr7.3:28797047-28797066 None:intergenic 40.0%
! CCTTTCGATAATGGCACTAT+CGG + chr7.3:28797473-28797492 None:intergenic 40.0%
!! ATTTTGGCCTTTCGAGAATC+TGG - chr7.3:28798170-28798189 MS.gene85423:intron 40.0%
!! GTTCTAAGTTGATCGACGAT+AGG + chr7.3:28798519-28798538 None:intergenic 40.0%
!! TACTTGTGTTGACTCCTGAA+GGG - chr7.3:28799064-28799083 MS.gene85423:CDS 40.0%
!!! ACCCTTATTTTATTCCGGCA+AGG - chr7.3:28796931-28796950 MS.gene85423:CDS 40.0%
AAGGCACACCATCAAAAGCT+TGG + chr7.3:28796773-28796792 None:intergenic 45.0%
AATCCACAAAGTCCGACTGT+TGG + chr7.3:28798020-28798039 None:intergenic 45.0%
ACAAAACCTGTCCGAAGACA+AGG - chr7.3:28798332-28798351 MS.gene85423:intron 45.0%
ACTTTGGCAGCACTTCAGTT+TGG - chr7.3:28799213-28799232 MS.gene85423:CDS 45.0%
AGAAGAATGCAATGGTGTGG+TGG - chr7.3:28796262-28796281 MS.gene85423:CDS 45.0%
ATTCAAAAGGACTGCAGGCA+TGG - chr7.3:28797624-28797643 MS.gene85423:intron 45.0%
GATCCAAGGACTCATCGAAT+CGG - chr7.3:28796295-28796314 MS.gene85423:CDS 45.0%
GCATTCACATGGTCAATCGT+TGG - chr7.3:28796990-28797009 MS.gene85423:CDS 45.0%
GCCATGCCTAATAAGATGCT+TGG - chr7.3:28797679-28797698 MS.gene85423:intron 45.0%
GCTAGCAATGGATATGATGG+TGG - chr7.3:28797420-28797439 MS.gene85423:intron 45.0%
GGTGTGCCTTGTGATGAATT+AGG - chr7.3:28796783-28796802 MS.gene85423:CDS 45.0%
GTCAAATGGGATTCCAGCTT+TGG - chr7.3:28798858-28798877 MS.gene85423:intron 45.0%
GTGCAAATTGCACGAATGCA+CGG - chr7.3:28797059-28797078 MS.gene85423:CDS 45.0%
TATCCAACAGTCGGACTTTG+TGG - chr7.3:28798014-28798033 MS.gene85423:CDS 45.0%
TCACGAAGGTCTTCCATAAG+AGG + chr7.3:28796398-28796417 None:intergenic 45.0%
TCGTGCAATTTGCACATTGG+TGG + chr7.3:28797054-28797073 None:intergenic 45.0%
! AGATGCGCTTTTCTTCGCTA+AGG - chr7.3:28796469-28796488 MS.gene85423:CDS 45.0%
! CCGATAGTGCCATTATCGAA+AGG - chr7.3:28797470-28797489 MS.gene85423:intron 45.0%
! CGAAGAAAAGCGCATCTCTA+AGG + chr7.3:28796466-28796485 None:intergenic 45.0%
! CGAGGTGAATTTTGCTTCCT+TGG + chr7.3:28796514-28796533 None:intergenic 45.0%
! GAGGTAGAAACATTGGCTGT+TGG - chr7.3:28797532-28797551 MS.gene85423:intron 45.0%
! GGACCGAAGTTTGTGGATTT+TGG - chr7.3:28798154-28798173 MS.gene85423:intron 45.0%
! TCACAGTGTTGAGGATCTTG+AGG - chr7.3:28797513-28797532 MS.gene85423:intron 45.0%
! TGGTGGTATTCCTCCGTTTT+CGG + chr7.3:28798611-28798630 None:intergenic 45.0%
! TTCTCATTTTCCGGGTTGCT+TGG + chr7.3:28796236-28796255 None:intergenic 45.0%
!! ATTTTAGTCGCCGAAAACGG+AGG - chr7.3:28798598-28798617 MS.gene85423:intron 45.0%
!! CTACTTGTGTTGACTCCTGA+AGG - chr7.3:28799063-28799082 MS.gene85423:CDS 45.0%
!! CTTCGGACAGGTTTTGTGAT+TGG + chr7.3:28798329-28798348 None:intergenic 45.0%
!! GCTTGGAAGAAGCACTTCTT+TGG - chr7.3:28797696-28797715 MS.gene85423:intron 45.0%
!! TTCTTGGTTTTCGGTTGGAG+TGG + chr7.3:28798473-28798492 None:intergenic 45.0%
AACCAAACAACGCCGTTTCG+AGG + chr7.3:28796437-28796456 None:intergenic 50.0%
AATGCACGTGCAACTCAGGA+GGG - chr7.3:28797366-28797385 MS.gene85423:intron 50.0%
ACATCGTAGTGCAGCTGTAG+AGG - chr7.3:28798133-28798152 MS.gene85423:CDS 50.0%
AGAACCTGAACCAAGCAACC+CGG - chr7.3:28796223-28796242 MS.gene85423:CDS 50.0%
AGAATGCAATGGTGTGGTGG+TGG - chr7.3:28796265-28796284 MS.gene85423:CDS 50.0%
AGCTAATGCACGTGCAACTC+AGG - chr7.3:28797362-28797381 MS.gene85423:intron 50.0%
CGTCATCCTGTTCCTCGAAA+CGG - chr7.3:28796422-28796441 MS.gene85423:CDS 50.0%
CTGTAGAGGACCGAAGTTTG+TGG - chr7.3:28798147-28798166 MS.gene85423:CDS 50.0%
GAAACGGCGTTGTTTGGTTG+AGG - chr7.3:28796438-28796457 MS.gene85423:CDS 50.0%
GTTGGAGCTTCACAGTGTTG+AGG - chr7.3:28797504-28797523 MS.gene85423:intron 50.0%
TAATGCACGTGCAACTCAGG+AGG - chr7.3:28797365-28797384 MS.gene85423:intron 50.0%
TCCAAAGGCTGCCTTGTCTT+CGG + chr7.3:28798346-28798365 None:intergenic 50.0%
TTAGGCATGGGAAGGTGAGA+TGG - chr7.3:28796710-28796729 MS.gene85423:CDS 50.0%
TTCCTCGAAACGGCGTTGTT+TGG - chr7.3:28796432-28796451 MS.gene85423:CDS 50.0%
TTCGAGGAACAGGATGACGA+AGG + chr7.3:28796421-28796440 None:intergenic 50.0%
! TGTGTTTGAAACGACGAGCG+AGG + chr7.3:28796370-28796389 None:intergenic 50.0%
! TTTTCCGGGTTGCTTGGTTC+AGG + chr7.3:28796230-28796249 None:intergenic 50.0%
!! CTTGCGTTTTAGGCATGGGA+AGG - chr7.3:28796702-28796721 MS.gene85423:CDS 50.0%
!! TTGTGTTGACTCCTGAAGGG+AGG - chr7.3:28799067-28799086 MS.gene85423:CDS 50.0%
ACAACGCCGTTTCGAGGAAC+AGG + chr7.3:28796431-28796450 None:intergenic 55.0%
CAACTGCAGCCGTAGAGGAT+TGG + chr7.3:28798050-28798069 None:intergenic 55.0%
CAGGATGACGAAGGTCACGA+AGG + chr7.3:28796412-28796431 None:intergenic 55.0%
CCAAGGACTCATCGAATCGG+TGG - chr7.3:28796298-28796317 MS.gene85423:CDS 55.0%
CCTCTACGGCTGCAGTTGTA+GGG - chr7.3:28798052-28798071 MS.gene85423:CDS 55.0%
GGAAGGAACAGAAGAGAGGG+AGG - chr7.3:28796193-28796212 MS.gene85423:CDS 55.0%
TCCGAAGACAAGGCAGCCTT+TGG - chr7.3:28798342-28798361 MS.gene85423:intron 55.0%
TCCTCTACGGCTGCAGTTGT+AGG - chr7.3:28798051-28798070 MS.gene85423:CDS 55.0%
TTGCGGCGAATACACCTTGC+CGG + chr7.3:28796948-28796967 None:intergenic 55.0%
!! ATGCAATGGTGTGGTGGTGG+TGG - chr7.3:28796268-28796287 MS.gene85423:CDS 55.0%
!! CCACCGATTCGATGAGTCCT+TGG + chr7.3:28796301-28796320 None:intergenic 55.0%
ACGTGCAACTCAGGAGGGCA+AGG - chr7.3:28797371-28797390 MS.gene85423:intron 60.0%
AGGCTGCCTTGTCTTCGGAC+AGG + chr7.3:28798341-28798360 None:intergenic 60.0%
CCAACCTCATGCCTCCCTTC+AGG + chr7.3:28799081-28799100 None:intergenic 60.0%
CCCTACAACTGCAGCCGTAG+AGG + chr7.3:28798055-28798074 None:intergenic 60.0%
! CCTGAAGGGAGGCATGAGGT+TGG - chr7.3:28799078-28799097 MS.gene85423:CDS 60.0%
! GACTCCTGAAGGGAGGCATG+AGG - chr7.3:28799074-28799093 MS.gene85423:CDS 60.0%
!! CAATGGTGTGGTGGTGGTGG+AGG - chr7.3:28796271-28796290 MS.gene85423:CDS 60.0%
!! GTGGTGGTGGAGGAGATCCA+AGG - chr7.3:28796281-28796300 MS.gene85423:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 28796191 28799338 28796191 ID=MS.gene85423
chr7.3 mRNA 28796191 28799338 28796191 ID=MS.gene85423.t1;Parent=MS.gene85423
chr7.3 exon 28798997 28799338 28798997 ID=MS.gene85423.t1.exon1;Parent=MS.gene85423.t1
chr7.3 CDS 28798997 28799338 28798997 ID=cds.MS.gene85423.t1;Parent=MS.gene85423.t1
chr7.3 exon 28798699 28798815 28798699 ID=MS.gene85423.t1.exon2;Parent=MS.gene85423.t1
chr7.3 CDS 28798699 28798815 28798699 ID=cds.MS.gene85423.t1;Parent=MS.gene85423.t1
chr7.3 exon 28797737 28798171 28797737 ID=MS.gene85423.t1.exon3;Parent=MS.gene85423.t1
chr7.3 CDS 28797737 28798171 28797737 ID=cds.MS.gene85423.t1;Parent=MS.gene85423.t1
chr7.3 exon 28796191 28797240 28796191 ID=MS.gene85423.t1.exon4;Parent=MS.gene85423.t1
chr7.3 CDS 28796191 28797240 28796191 ID=cds.MS.gene85423.t1;Parent=MS.gene85423.t1
Gene Sequence

>MS.gene85423

ATGGAAGGAACAGAAGAGAGGGAGGAAAATGTAGAACCTGAACCAAGCAACCCGGAAAATGAGAATGAAGAAGAAGAATGCAATGGTGTGGTGGTGGTGGAGGAGATCCAAGGACTCATCGAATCGGTGGTTCAATTCGGCGAATACAGAAGAACACAAAGGAAAGAATCACACAACCTCGCTCGTCGTTTCAAACACATGTTGCCTCTTATGGAAGACCTTCGTGACCTTCGTCATCCTGTTCCTCGAAACGGCGTTGTTTGGTTGAGGAACCTTAGAGATGCGCTTTTCTTCGCTAAGGATTTGTTGAAATTGTGTAGCCAAGGAAGCAAAATTCACCTCGTAAATAACAAACAAACTTTTTCTCATTTTTATGTTTTTTTTTTCTTTTTCTATTGAAATAATATAAATCATCAAATCTATGATTTCTCTTTTTTAAGGATAAGAAATAATTATCATTTTTGTATTTGATTATGTTTTGATGAATAGGGTATTGATGTTTTCTTTTTTTCTTGCGTTTTAGGCATGGGAAGGTGAGATGGTTATGATCAAATTTCAGAAGGTTTATGAAAAATTAAGCCAAGCTTTTGATGGTGTGCCTTGTGATGAATTAGGGATTTCTGATGAAGTAAAAGAACAGGTATTTGTAAATTGTAATACATTTTATGTTTTATTCTCATTTAGTTTAATAATCACTATGATTCTGCAAAGATTGTTCAATATATAATTATGTCTATGGAACCCTTATTTTATTCCGGCAAGGTGTATTCGCCGCAATACACCGCATTCACAAATACATGCATTCACATGGTCAATCGTTGGATCCAGATGTAGAAAACAAGCAGATTTTGATCCAACAACCACCAATGTGCAAATTGCACGAATGCACGGAATTTGTGACTATATCAAATGCAAATCCGCTCTTAATAATTACACATTTGGTCACTGTTATAAGAAAAAAATCATTTTTAGATTAATTGAATAACTGAAGTATTTGGTCTATAATATAGACCAAATACACCAGTTATTCAATAAACCTACAAAAATGATTCGTTGCTTATAATAGTGATCGGATAGAGCAATTATCCGATCACTATGTTGCTAGTAGTCTTCGATCATATATAATATGCATATTGAAATAATGTTATATACTTTGGCTTAATTCAGCTTGAGCTAATGCACGTGCAACTCAGGAGGGCAAGGAGAAGAACTGATACACAAGACATAGAGCTAGCAATGGATATGATGGTGGTGTTCTCTGATGAAGATGATCGTAATGCCGATAGTGCCATTATCGAAAGGCTTGCAAAAAAGTTGGAGCTTCACAGTGTTGAGGATCTTGAGGTAGAAACATTGGCTGTTGGAAACCTTGTTAGAGAAAGAAAAGGGAAACAAAGTGAGAGTACAAAAAAAATAATTGACCTTCTTAACAGATTCAAAAGGACTGCAGGCATGGAAGAAACCGATGTTATCTTTGATGATGATCATGCCATGCCTAATAAGATGCTTGGAAGAAGCACTTCTTTGGTCATTCCTCATGAGTTTCTGTGTCCAATAACACTTGAAATTATGTCTGATCCTGTTATTATTGCAAGTGGCCAGGTAATCACGAATTAAGTTCTGTAAAAGAATTTTAATTTTTTCACATTTAAGCCTAAGTTGGAAAGATACTAGTCATATTTATGAAAATGGATTCGATGCGGTCAATAATTTCTACTATAATCAATAGATCTCGACTGTTGCATACATATTGGACGGTTCATATTATGAATTCGTATTATAAATTTGATTCGGTGAAGTTCAAATATGAATCGTCCAATCTTTATCCAACAGTCGGACTTTGTGGATTCTGAAATCCAATCCTCTACGGCTGCAGTTGTAGGGATTATTAGATTTAGAATGAGAATTTCTCACTCTTAATCTAACGGTCGCGACATATGCAACATCGTAGTGCAGCTGTAGAGGACCGAAGTTTGTGGATTTTGGCCTTTCGAGAATCTGGAATGAAGAAAACTTAGGTTTTATCTCTATATAATAATGCTAACAAAGGTTTTGTTTCTCTTTTTCTTGTCATTGTGTGTGTTTGTTTCCATCAAAGACATATGAAAGGGAAAGCATAGAGAAGTGGTTCAAATCCAATCACAAAACCTGTCCGAAGACAAGGCAGCCTTTGGAACATCTTCAATTAGCACCAAACTGTGCCTTAAGAAATTTAATTGCTGAATGGTGTGAGAACAACAATTTCAAACTTCCAAAAATCTGTTCTTCATGTCAAGAAACCACTCCAACCGAAAACCAAGAAGAAATTCCATGTTTGGTTGAAAACCTATCGTCGATCAACTTAGAACATCAAAGAAAGGCGGTCGAGAGAATCCGCATGTTATCAAAAGAAAGTTCAGAGAACAGAATTTTAGTCGCCGAAAACGGAGGAATACCACCATTAGTACAAATCCTATCATATCCAGATTCAAAAATAAAAGAACATGCTGTTACAGCACTTTTGAACTTATCAATTGATGAAGCTAACAAAAAACTTATATCAAAAGAAGGTGCTATTCCTGCTATAATAGAAGTATTGGAAAATGGAAGTATTGTGGCTAAAGAAAACTCTGCAGCAGCTTTATTTAGCTTATCAATGATTGATGAAAATAAAGAGGTTGTAGGAATGTCAAATGGGATTCCAGCTTTGGTAAATTTATTACAAAATGGAACAGTTAGAGGGAAAAAAGATGCTGCTACAGCACTTTTTAGCTTATCATTAAACCATGCAAATAAAGAGAGAGCTATAAAAGCTGGAATTGTGACAGCTTTACTTCAATTGTTAAAGGACAGAAACTTGGGAATGATTGATGAAGCACTTTCTATTTTGTTGCTACTTGTGTTGACTCCTGAAGGGAGGCATGAGGTTGGACAATTATCATTTATTGAAACTCTTGTTGAGTTTACTAGAGAAGGGACTCCAAAGAACAAAGAATGTGCAGCTTCTGTTCTTCTTGAGTTGTGTTCAAGTAATTCATCTTTTACTTTGGCAGCACTTCAGTTTGGAGTTTATGAGCATTTGATTGAGATTAAAGAAAGTGGTACAAATAGAGCACAAAGGAAAGCAAATGCAATTTTAGATCTCATAAAAAGGAGTGAGCAAATTTAA
Protein sequence

>MS.gene85423.t1

MEGTEEREENVEPEPSNPENENEEEECNGVVVVEEIQGLIESVVQFGEYRRTQRKESHNLARRFKHMLPLMEDLRDLRHPVPRNGVVWLRNLRDALFFAKDLLKLCSQGSKIHLAWEGEMVMIKFQKVYEKLSQAFDGVPCDELGISDEVKEQLELMHVQLRRARRRTDTQDIELAMDMMVVFSDEDDRNADSAIIERLAKKLELHSVEDLEVETLAVGNLVRERKGKQSESTKKIIDLLNRFKRTAGMEETDVIFDDDHAMPNKMLGRSTSLVIPHEFLCPITLEIMSDPVIIASGQTYERESIEKWFKSNHKTCPKTRQPLEHLQLAPNCALRNLIAEWCENNNFKLPKICSSCQETTPTENQEEIPCLVENLSSINLEHQRKAVERIRMLSKESSENRILVAENGGIPPLVQILSYPDSKIKEHAVTALLNLSIDEANKKLISKEGAIPAIIEVLENGSIVAKENSAAALFSLSMIDENKEVVGMSNGIPALVNLLQNGTVRGKKDAATALFSLSLNHANKERAIKAGIVTALLQLLKDRNLGMIDEALSILLLLVLTPEGRHEVGQLSFIETLVEFTREGTPKNKECAASVLLELCSSNSSFTLAALQFGVYEHLIEIKESGTNRAQRKANAILDLIKRSEQI