Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86076.t1 | XP_024641978.1 | 93.5 | 664 | 43 | 0 | 1 | 664 | 47 | 710 | 0.00E+00 | 1198.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86076.t1 | A0A396HGV7 | 93.5 | 664 | 43 | 0 | 1 | 664 | 47 | 710 | 0.0e+00 | 1198.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05157 | MS.gene86076 | 0.800959 | 1.13E-48 | -1.69E-46 |
| MS.gene051719 | MS.gene86076 | 0.830668 | 2.58E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene86076 | 0.815091 | 1.10E-51 | -1.69E-46 |
| MS.gene052133 | MS.gene86076 | 0.808982 | 2.37E-50 | -1.69E-46 |
| MS.gene052732 | MS.gene86076 | 0.812527 | 4.05E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene86076 | 0.8246 | 7.39E-54 | -1.69E-46 |
| MS.gene053174 | MS.gene86076 | 0.807201 | 5.67E-50 | -1.69E-46 |
| MS.gene054550 | MS.gene86076 | 0.806156 | 9.43E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene86076 | 0.834345 | 3.16E-56 | -1.69E-46 |
| MS.gene055465 | MS.gene86076 | 0.830038 | 3.68E-55 | -1.69E-46 |
| MS.gene055466 | MS.gene86076 | 0.820491 | 6.67E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene86076 | 0.820132 | 8.06E-53 | -1.69E-46 |
| MS.gene055537 | MS.gene86076 | 0.800414 | 1.46E-48 | -1.69E-46 |
| MS.gene055580 | MS.gene86076 | -0.80098 | 1.12E-48 | -1.69E-46 |
| MS.gene055891 | MS.gene86076 | 0.802015 | 6.86E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene86076 | 0.820081 | 8.28E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86076.t1 | MTR_3g028350 | 30.675 | 163 | 55 | 5 | 396 | 555 | 32 | 139 | 1.25e-13 | 68.9 |
| MS.gene86076.t1 | MTR_7g105550 | 53.448 | 58 | 27 | 0 | 362 | 419 | 8 | 65 | 1.88e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86076.t1 | AT3G17450 | 31.238 | 509 | 334 | 7 | 120 | 620 | 291 | 791 | 5.12e-81 | 275 |
| MS.gene86076.t1 | AT3G17450 | 31.238 | 509 | 334 | 7 | 120 | 620 | 291 | 791 | 5.12e-81 | 275 |
| MS.gene86076.t1 | AT4G15020 | 32.394 | 497 | 324 | 7 | 139 | 629 | 197 | 687 | 1.23e-77 | 264 |
| MS.gene86076.t1 | AT4G15020 | 32.394 | 497 | 324 | 7 | 139 | 629 | 197 | 687 | 1.23e-77 | 264 |
| MS.gene86076.t1 | AT3G22220 | 31.546 | 485 | 316 | 8 | 139 | 616 | 193 | 668 | 4.69e-73 | 251 |
| MS.gene86076.t1 | AT3G22220 | 31.546 | 485 | 316 | 8 | 139 | 616 | 193 | 668 | 4.69e-73 | 251 |
| MS.gene86076.t1 | AT3G22220 | 31.546 | 485 | 316 | 8 | 139 | 616 | 193 | 668 | 4.69e-73 | 251 |
| MS.gene86076.t1 | AT3G22220 | 31.546 | 485 | 316 | 8 | 139 | 616 | 193 | 668 | 4.69e-73 | 251 |
| MS.gene86076.t1 | AT1G79740 | 27.563 | 595 | 399 | 11 | 32 | 617 | 14 | 585 | 1.02e-64 | 226 |
| MS.gene86076.t1 | AT1G79740 | 27.563 | 595 | 399 | 11 | 32 | 617 | 14 | 585 | 1.02e-64 | 226 |
| MS.gene86076.t1 | AT1G79740 | 28.942 | 463 | 311 | 7 | 162 | 617 | 1 | 452 | 2.61e-56 | 200 |
| MS.gene86076.t1 | AT1G79740 | 28.942 | 463 | 311 | 7 | 162 | 617 | 1 | 452 | 2.61e-56 | 200 |
| MS.gene86076.t1 | AT3G13020 | 27.731 | 595 | 367 | 16 | 22 | 586 | 8 | 569 | 1.96e-55 | 200 |
| MS.gene86076.t1 | AT5G33406 | 36.458 | 288 | 170 | 5 | 340 | 619 | 1 | 283 | 1.46e-48 | 179 |
| MS.gene86076.t1 | AT3G13030 | 25.974 | 539 | 364 | 13 | 97 | 620 | 14 | 532 | 1.96e-47 | 176 |
| MS.gene86076.t1 | AT3G13030 | 25.974 | 539 | 364 | 13 | 97 | 620 | 14 | 532 | 1.96e-47 | 176 |
| MS.gene86076.t1 | AT3G13030 | 25.974 | 539 | 364 | 13 | 97 | 620 | 14 | 532 | 1.96e-47 | 176 |
| MS.gene86076.t1 | AT3G13030 | 25.974 | 539 | 364 | 13 | 97 | 620 | 14 | 532 | 1.96e-47 | 176 |
| MS.gene86076.t1 | AT3G13030 | 25.046 | 539 | 336 | 14 | 97 | 620 | 14 | 499 | 9.05e-40 | 154 |
| MS.gene86076.t1 | AT3G13010 | 26.531 | 490 | 311 | 13 | 117 | 587 | 73 | 532 | 1.01e-39 | 154 |
| MS.gene86076.t1 | AT1G43260 | 28.270 | 237 | 169 | 1 | 140 | 375 | 39 | 275 | 9.65e-31 | 122 |
| MS.gene86076.t1 | AT1G36095 | 32.515 | 163 | 110 | 0 | 246 | 408 | 135 | 297 | 6.65e-22 | 97.4 |
| MS.gene86076.t1 | AT5G31412 | 36.667 | 120 | 74 | 1 | 196 | 315 | 123 | 240 | 6.60e-18 | 87.4 |
Find 153 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACAAAAGGAATATATATT+TGG | 0.177889 | 6.3:-8544961 | MS.gene86076:CDS |
| TGCTTGACAGGCAGTTCTTA+TGG | 0.234168 | 6.3:-8544158 | MS.gene86076:CDS |
| CCACCGAGTTTCTTTGATAT+TGG | 0.236160 | 6.3:-8545469 | MS.gene86076:CDS |
| CGATTTGCATGTCACTTAAC+TGG | 0.262528 | 6.3:-8545832 | MS.gene86076:CDS |
| GGAATATATATTTGGAAAGT+TGG | 0.296758 | 6.3:-8544953 | MS.gene86076:CDS |
| AAGATGGTGTTGGGAGGAAT+AGG | 0.307959 | 6.3:-8545678 | MS.gene86076:CDS |
| GCTTGACAGGCAGTTCTTAT+GGG | 0.335207 | 6.3:-8544157 | MS.gene86076:CDS |
| GCGAAAGATGCCCACCAAAT+TGG | 0.338113 | 6.3:+8544224 | None:intergenic |
| TCAATCCTAGATCTTTCTTC+AGG | 0.346866 | 6.3:+8544329 | None:intergenic |
| AATGTTATGATTTGTTATAA+AGG | 0.347513 | 6.3:-8544764 | MS.gene86076:CDS |
| AGACACGAATTGCAAAATTC+TGG | 0.348168 | 6.3:+8544183 | None:intergenic |
| TTCGTCAACTTAATATCTTC+CGG | 0.365017 | 6.3:+8545433 | None:intergenic |
| TAAGTTGACGAATGAAGTTT+TGG | 0.365868 | 6.3:-8545422 | MS.gene86076:CDS |
| GTGAGGAGACTCCACCAATT+TGG | 0.368292 | 6.3:-8544238 | MS.gene86076:CDS |
| AACCATGGGTTTCATTTATG+AGG | 0.373668 | 6.3:-8544690 | MS.gene86076:CDS |
| CAAGTTTAGTATGTTCCTCT+TGG | 0.377450 | 6.3:+8545333 | None:intergenic |
| CCAGCAGTAATTACGGCTAT+TGG | 0.383693 | 6.3:+8544260 | None:intergenic |
| ATAAGTGTCGCTTTGTGAAT+AGG | 0.390766 | 6.3:+8545049 | None:intergenic |
| TTGCATGATGAAAATGCTAA+TGG | 0.391658 | 6.3:-8543816 | MS.gene86076:CDS |
| AGAATCCTCTGAATAAATAA+AGG | 0.394912 | 6.3:+8545006 | None:intergenic |
| CCAGCGGCAGCTACATAGTA+TGG | 0.400600 | 6.3:+8545160 | None:intergenic |
| CTCGCTGGACTTCCACTCCT+TGG | 0.404533 | 6.3:+8544850 | None:intergenic |
| TATTCACAAAGCGACACTTA+TGG | 0.406837 | 6.3:-8545047 | MS.gene86076:CDS |
| CAATGCTATACCAGTTGAAA+TGG | 0.411595 | 6.3:-8545554 | MS.gene86076:CDS |
| CCTAGATCTTTCTTCAGGAT+TGG | 0.411662 | 6.3:+8544334 | None:intergenic |
| CTCCTCACCAGCAGTAATTA+CGG | 0.416080 | 6.3:+8544253 | None:intergenic |
| CGAAAAGGACTAGGCTGTAT+TGG | 0.416184 | 6.3:-8545126 | MS.gene86076:CDS |
| TATACTTGAAGTGCTTCGTT+TGG | 0.418435 | 6.3:-8544732 | MS.gene86076:CDS |
| ATGACGTTGTTGAAGAGGTT+GGG | 0.419356 | 6.3:-8545219 | MS.gene86076:CDS |
| TATTGTGATAATGTTGTAAC+CGG | 0.423761 | 6.3:-8545865 | MS.gene86076:CDS |
| ATGCTTATATGGCAAATCAT+TGG | 0.427519 | 6.3:-8544488 | MS.gene86076:CDS |
| CGAGTTTCTTTGATATTGGA+TGG | 0.429120 | 6.3:-8545465 | MS.gene86076:CDS |
| CATTGCCCTTTGCATGCTGC+AGG | 0.435557 | 6.3:-8544452 | MS.gene86076:CDS |
| GAGTTCGCAAAGACGATGAA+TGG | 0.442280 | 6.3:-8544830 | MS.gene86076:CDS |
| ATTCATGAGGAAGGGTATGT+TGG | 0.447492 | 6.3:-8545727 | MS.gene86076:CDS |
| GATCACTGGTTGCAGCATAA+TGG | 0.450076 | 6.3:-8545377 | MS.gene86076:CDS |
| TCACTTTCTACCATTTCAAC+TGG | 0.450413 | 6.3:+8545544 | None:intergenic |
| CCAATCCTGAAGAAAGATCT+AGG | 0.450590 | 6.3:-8544334 | MS.gene86076:CDS |
| CCATACTATGTAGCTGCCGC+TGG | 0.452127 | 6.3:-8545160 | MS.gene86076:CDS |
| AAGTTTAGTATGTTCCTCTT+GGG | 0.452190 | 6.3:+8545334 | None:intergenic |
| GTTTAAGACTATGTGTGATT+TGG | 0.454973 | 6.3:-8545518 | MS.gene86076:CDS |
| ACAAGACTCCGTCGATAGTA+AGG | 0.456125 | 6.3:-8545626 | MS.gene86076:CDS |
| TGCATGATGAAAATGCTAAT+GGG | 0.456134 | 6.3:-8543815 | MS.gene86076:CDS |
| CCAGGACTATAGTGAAATTG+AGG | 0.464932 | 6.3:+8544416 | None:intergenic |
| CATCGTCTTTGCGAACTCGC+TGG | 0.467375 | 6.3:+8544835 | None:intergenic |
| CCTCAATTTCACTATAGTCC+TGG | 0.468188 | 6.3:-8544416 | MS.gene86076:CDS |
| TGAGAAACTCTTTAAGATGA+TGG | 0.471735 | 6.3:-8545242 | MS.gene86076:CDS |
| AAAAGAAAAGGCGGTAAAGA+TGG | 0.472289 | 6.3:-8545694 | MS.gene86076:CDS |
| GATAGTTTCAAGAGAAAGAG+AGG | 0.479404 | 6.3:-8545655 | MS.gene86076:CDS |
| AAACGAAGCACTTCAAGTAT+AGG | 0.486852 | 6.3:+8544734 | None:intergenic |
| CTTGACAGGCAGTTCTTATG+GGG | 0.488717 | 6.3:-8544156 | MS.gene86076:CDS |
| CTAATGTCATCTCTAAATCC+AGG | 0.494853 | 6.3:+8544398 | None:intergenic |
| ATTCGTGTCTTATGCTTGAC+AGG | 0.495931 | 6.3:-8544170 | MS.gene86076:CDS |
| GATGCCAATGGAGACGTTGA+AGG | 0.503971 | 6.3:-8543909 | MS.gene86076:CDS |
| TAAGGAGAGTTTGAGTGAGG+AGG | 0.505132 | 6.3:-8545608 | MS.gene86076:CDS |
| TGTTGATGGCGAAAAGGACT+AGG | 0.505339 | 6.3:-8545135 | MS.gene86076:CDS |
| AAGGCGGTAAAGATGGTGTT+GGG | 0.505881 | 6.3:-8545687 | MS.gene86076:CDS |
| AGATGGTGTTGGGAGGAATA+GGG | 0.506593 | 6.3:-8545677 | MS.gene86076:CDS |
| CTGAAGTGTCTAGCTGATGC+GGG | 0.510022 | 6.3:-8543849 | MS.gene86076:CDS |
| TGAACCTTCAACGTCTCCAT+TGG | 0.513051 | 6.3:+8543905 | None:intergenic |
| GGTACACGCTATGAATTTGA+AGG | 0.513715 | 6.3:-8544018 | MS.gene86076:CDS |
| AATATCCTGCAGCATGCAAA+GGG | 0.513850 | 6.3:+8544447 | None:intergenic |
| CTGGGATGTTGATGGCGAAA+AGG | 0.516498 | 6.3:-8545141 | MS.gene86076:CDS |
| GGCAATGGTGAAAGCTATAG+AGG | 0.516764 | 6.3:-8544669 | MS.gene86076:CDS |
| TCACTTGATCTTAAACTACA+TGG | 0.517326 | 6.3:-8545910 | MS.gene86076:CDS |
| CCTTGTGCAACACATTGCAT+TGG | 0.517858 | 6.3:-8545100 | MS.gene86076:CDS |
| GATGACGTTGTTGAAGAGGT+TGG | 0.518847 | 6.3:-8545220 | MS.gene86076:CDS |
| GGGTTTCATTTATGAGGCAA+TGG | 0.521666 | 6.3:-8544684 | MS.gene86076:CDS |
| CTATTGCTACTCTTCACAAA+AGG | 0.525485 | 6.3:-8544974 | MS.gene86076:CDS |
| TTTATTCAGAGGATTCTCTC+AGG | 0.527532 | 6.3:-8545000 | MS.gene86076:CDS |
| AGCTGCCGCTGGGATGTTGA+TGG | 0.527540 | 6.3:-8545149 | MS.gene86076:CDS |
| AGTTCGCAAAGACGATGAAT+GGG | 0.528816 | 6.3:-8544829 | MS.gene86076:CDS |
| GATGGATATGAAGACGAAGA+TGG | 0.530094 | 6.3:-8543756 | MS.gene86076:CDS |
| CTGCAGCATGCAAAGGGCAA+TGG | 0.530815 | 6.3:+8544453 | None:intergenic |
| TGAGGTGAAGAAGGAAATGT+TGG | 0.531481 | 6.3:-8545773 | MS.gene86076:CDS |
| AAGATGACAAAGAAAGAGAA+AGG | 0.531896 | 6.3:-8544625 | MS.gene86076:intron |
| TATTGATGCGTCTGATATGT+TGG | 0.533209 | 6.3:-8545272 | MS.gene86076:CDS |
| GATAAGAATGTTCAAATCCA+AGG | 0.533224 | 6.3:-8544867 | MS.gene86076:CDS |
| TGTATCCTTTATTTATTCAG+AGG | 0.536433 | 6.3:-8545011 | MS.gene86076:CDS |
| CCAATAGCCGTAATTACTGC+TGG | 0.537059 | 6.3:-8544260 | MS.gene86076:CDS |
| GGCAAATCATTGGTGGGACA+TGG | 0.539397 | 6.3:-8544478 | MS.gene86076:CDS |
| TAGTAAGGAGAGTTTGAGTG+AGG | 0.540366 | 6.3:-8545611 | MS.gene86076:CDS |
| TTGTTAGTGAACAGTCCAAA+GGG | 0.540672 | 6.3:-8545313 | MS.gene86076:CDS |
| TGCATGTCACTTAACTGGAA+AGG | 0.541872 | 6.3:-8545827 | MS.gene86076:CDS |
| CAGGACTATAGTGAAATTGA+GGG | 0.542010 | 6.3:+8544417 | None:intergenic |
| AAAGGCGGTAAAGATGGTGT+TGG | 0.542026 | 6.3:-8545688 | MS.gene86076:CDS |
| TGACGTTGTTGAAGAGGTTG+GGG | 0.542773 | 6.3:-8545218 | MS.gene86076:CDS |
| GAGGAAGGGTATGTTGGAGT+AGG | 0.543473 | 6.3:-8545721 | MS.gene86076:CDS |
| AAAGATGCCCACCAAATTGG+TGG | 0.543579 | 6.3:+8544227 | None:intergenic |
| GTGATAATGTTGTAACCGGC+GGG | 0.546780 | 6.3:-8545861 | MS.gene86076:CDS |
| CTTATATGGCAAATCATTGG+TGG | 0.550934 | 6.3:-8544485 | MS.gene86076:CDS |
| GGCAAAATATGTTGTTGAAG+TGG | 0.552303 | 6.3:-8545950 | MS.gene86076:CDS |
| GATGACGATGGAGATGAAGA+TGG | 0.552380 | 6.3:-8543774 | MS.gene86076:CDS |
| AGGTTCAGATGTGGATGCCT+CGG | 0.552820 | 6.3:-8543889 | MS.gene86076:CDS |
| TTGAAAGAGATTCATGAGGA+AGG | 0.556110 | 6.3:-8545736 | MS.gene86076:CDS |
| TGTTGGTGATGAGGTGAAGA+AGG | 0.557137 | 6.3:-8545782 | MS.gene86076:CDS |
| TGGGAAATACATTGAGGATG+CGG | 0.557967 | 6.3:-8544810 | MS.gene86076:CDS |
| TTGTGAGGGTGTTGGTGATG+AGG | 0.559046 | 6.3:-8545791 | MS.gene86076:CDS |
| TTGGTTTCAAGACATGGTGT+AGG | 0.560885 | 6.3:-8545499 | MS.gene86076:CDS |
| AGGCATGTCGAGCGGTTGCA+AGG | 0.561168 | 6.3:-8545588 | MS.gene86076:CDS |
| AGAGCTATGTGGAAGATCAC+TGG | 0.561392 | 6.3:-8545391 | MS.gene86076:CDS |
| AGGAGACTCCACCAATTTGG+TGG | 0.563322 | 6.3:-8544235 | MS.gene86076:CDS |
| AAATATCCTGCAGCATGCAA+AGG | 0.563551 | 6.3:+8544446 | None:intergenic |
| GTTGAAGCTTGTGAGGGTGT+TGG | 0.568205 | 6.3:-8545799 | MS.gene86076:CDS |
| TGAAAGAGATTCATGAGGAA+GGG | 0.568654 | 6.3:-8545735 | MS.gene86076:CDS |
| CTCATGAATCTCTTTCAAAG+TGG | 0.568820 | 6.3:+8545741 | None:intergenic |
| TAATCGGAAGGCCTTCGAGA+TGG | 0.573794 | 6.3:-8544126 | MS.gene86076:intron |
| TCATAAATGAAACCCATGGT+TGG | 0.578573 | 6.3:+8544692 | None:intergenic |
| AAATGTTGTCCATGTTGTAA+CGG | 0.579800 | 6.3:-8545191 | MS.gene86076:CDS |
| TTATCATCTTACCATCTCGA+AGG | 0.581219 | 6.3:+8544115 | None:intergenic |
| GTGTATATTCCGTTACAACA+TGG | 0.586670 | 6.3:+8545182 | None:intergenic |
| TGTGATTTGGTTTCAAGACA+TGG | 0.588793 | 6.3:-8545505 | MS.gene86076:CDS |
| GATGGATGACGTTGTTGAAG+AGG | 0.589606 | 6.3:-8545224 | MS.gene86076:CDS |
| TGTGATAATGTTGTAACCGG+CGG | 0.592762 | 6.3:-8545862 | MS.gene86076:CDS |
| GAATGTTCAAATCCAAGGAG+TGG | 0.592797 | 6.3:-8544862 | MS.gene86076:CDS |
| GAGCTAAATCTTGATGCCAA+TGG | 0.595617 | 6.3:-8543921 | MS.gene86076:CDS |
| TGTTGTCTTCATGAGAACAA+AGG | 0.597006 | 6.3:-8544896 | MS.gene86076:CDS |
| GAATGATGCTGCAACACTGT+GGG | 0.604961 | 6.3:-8545078 | MS.gene86076:CDS |
| CTTGTTAGTGAACAGTCCAA+AGG | 0.605024 | 6.3:-8545314 | MS.gene86076:CDS |
| TCTGAAGTGTCTAGCTGATG+CGG | 0.607819 | 6.3:-8543850 | MS.gene86076:CDS |
| AGCCGTAATTACTGCTGGTG+AGG | 0.609038 | 6.3:-8544255 | MS.gene86076:CDS |
| GATGAATGGGAAATACATTG+AGG | 0.609052 | 6.3:-8544816 | MS.gene86076:CDS |
| CATCCAATATCAAAGAAACT+CGG | 0.610975 | 6.3:+8545466 | None:intergenic |
| CATACTATGTAGCTGCCGCT+GGG | 0.612870 | 6.3:-8545159 | MS.gene86076:CDS |
| TGGAAGAACATAGAGCTATG+TGG | 0.616519 | 6.3:-8545402 | MS.gene86076:CDS |
| GGAAAATGTTGAAGCTTGTG+AGG | 0.619175 | 6.3:-8545806 | MS.gene86076:CDS |
| GAGTGAGGAGGCATGTCGAG+CGG | 0.620889 | 6.3:-8545596 | MS.gene86076:CDS |
| TTCAATCGAGAAACCAACCA+TGG | 0.626609 | 6.3:-8544705 | MS.gene86076:CDS |
| AAGCTATAGAGGAGATACAG+AGG | 0.627859 | 6.3:-8544658 | MS.gene86076:CDS |
| ACAACATTGTATAACAAGGA+TGG | 0.628564 | 6.3:-8544360 | MS.gene86076:CDS |
| TATTTACTAACTTTCCCAAG+AGG | 0.628639 | 6.3:-8545348 | MS.gene86076:CDS |
| TTATATGGCAAATCATTGGT+GGG | 0.628932 | 6.3:-8544484 | MS.gene86076:CDS |
| GGAGACTCCACCAATTTGGT+GGG | 0.636055 | 6.3:-8544234 | MS.gene86076:CDS |
| GCGGTAAAGATGGTGTTGGG+AGG | 0.636309 | 6.3:-8545684 | MS.gene86076:CDS |
| CAAACTCTCCTTACTATCGA+CGG | 0.640889 | 6.3:+8545618 | None:intergenic |
| TCAATCGAGAAACCAACCAT+GGG | 0.641500 | 6.3:-8544704 | MS.gene86076:CDS |
| ACATGGTGTATCTGAATCCG+AGG | 0.642604 | 6.3:+8543872 | None:intergenic |
| GTCTACAACATTGTATAACA+AGG | 0.644114 | 6.3:-8544364 | MS.gene86076:CDS |
| TGCCTCATAAATGAAACCCA+TGG | 0.649986 | 6.3:+8544688 | None:intergenic |
| GATGAAAACAGAGATGACGA+TGG | 0.654534 | 6.3:-8543786 | MS.gene86076:CDS |
| GCATGATGAAAATGCTAATG+GGG | 0.655477 | 6.3:-8543814 | MS.gene86076:CDS |
| CACTTTGAAAGAGATTCATG+AGG | 0.664505 | 6.3:-8545740 | MS.gene86076:CDS |
| TCAGCTAGACACTTCAGACA+TGG | 0.667126 | 6.3:+8543855 | None:intergenic |
| CCAATGCAATGTGTTGCACA+AGG | 0.671669 | 6.3:+8545100 | None:intergenic |
| AGACGTTGAAGGTTCAGATG+TGG | 0.676100 | 6.3:-8543898 | MS.gene86076:CDS |
| TGCAAATCGATAAAACCCGC+CGG | 0.677860 | 6.3:+8545846 | None:intergenic |
| TGAAGTGTCTAGCTGATGCG+GGG | 0.678573 | 6.3:-8543848 | MS.gene86076:CDS |
| TTGACAGGCAGTTCTTATGG+GGG | 0.679913 | 6.3:-8544155 | MS.gene86076:CDS |
| GGAATGATGCTGCAACACTG+TGG | 0.696932 | 6.3:-8545079 | MS.gene86076:CDS |
| CCAATATCAAAGAAACTCGG+TGG | 0.701325 | 6.3:+8545469 | None:intergenic |
| GAAAATGTTGAAGCTTGTGA+GGG | 0.712536 | 6.3:-8545805 | MS.gene86076:CDS |
| AATGATGCTGCAACACTGTG+GGG | 0.720892 | 6.3:-8545077 | MS.gene86076:CDS |
| TTTCGCCATCAACATCCCAG+CGG | 0.744186 | 6.3:+8545144 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTTATGATTTGTTATAA+AGG | - | chr6.3:8545181-8545200 | MS.gene86076:CDS | 15.0% |
| !!! | ATTATTTTTTTTGTTGCATT+TGG | + | chr6.3:8543908-8543927 | None:intergenic | 15.0% |
| !! | TAAGCATAGAACTAAAAAAA+TGG | + | chr6.3:8545444-8545463 | None:intergenic | 20.0% |
| !! | TCACAAAAGGAATATATATT+TGG | - | chr6.3:8544984-8545003 | MS.gene86076:CDS | 20.0% |
| !! | TTGTAGTTTAAAAAAAGTGA+AGG | + | chr6.3:8543854-8543873 | None:intergenic | 20.0% |
| !!! | CACTTTTTTTAAACTACAAT+GGG | - | chr6.3:8543855-8543874 | MS.gene86076:CDS | 20.0% |
| !!! | TAATAGGTATTTTACAATTC+AGG | + | chr6.3:8545867-8545886 | None:intergenic | 20.0% |
| !!! | TCACTTTTTTTAAACTACAA+TGG | - | chr6.3:8543854-8543873 | MS.gene86076:CDS | 20.0% |
| !!! | TTTAAGACTGAAATAACTAT+AGG | + | chr6.3:8543768-8543787 | None:intergenic | 20.0% |
| !!! | TTTTTAGTTCTATGCTTATA+TGG | - | chr6.3:8545446-8545465 | MS.gene86076:CDS | 20.0% |
| ! | AAAAGTGAAGGAAATGAAAA+TGG | + | chr6.3:8543842-8543861 | None:intergenic | 25.0% |
| ! | AAAGTGAAGGAAATGAAAAT+GGG | + | chr6.3:8543841-8543860 | None:intergenic | 25.0% |
| ! | AAGAGAAAGGTAAATATGTT+CGG | - | chr6.3:8545333-8545352 | MS.gene86076:CDS | 25.0% |
| ! | AATCGTATTTGCATATGTTT+AGG | - | chr6.3:8545906-8545925 | MS.gene86076:CDS | 25.0% |
| ! | AGAATCCTCTGAATAAATAA+AGG | + | chr6.3:8544942-8544961 | None:intergenic | 25.0% |
| ! | GGAATATATATTTGGAAAGT+TGG | - | chr6.3:8544992-8545011 | MS.gene86076:CDS | 25.0% |
| ! | TATCAAGGATAGAAAGTAAT+AGG | + | chr6.3:8545883-8545902 | None:intergenic | 25.0% |
| !! | AATTGATGTTCTCTTCTTTT+CGG | + | chr6.3:8546004-8546023 | None:intergenic | 25.0% |
| !! | TATTGGATGGAAATATTTTC+CGG | - | chr6.3:8544493-8544512 | MS.gene86076:CDS | 25.0% |
| !! | TATTGTGATAATGTTGTAAC+CGG | - | chr6.3:8544080-8544099 | MS.gene86076:intron | 25.0% |
| !! | TATTTTGCCACTATCTTTTT+AGG | + | chr6.3:8543984-8544003 | None:intergenic | 25.0% |
| !! | TGTATCCTTTATTTATTCAG+AGG | - | chr6.3:8544934-8544953 | MS.gene86076:CDS | 25.0% |
| !!! | TAATGATGTTGTTTTTGTCA+TGG | - | chr6.3:8545963-8545982 | MS.gene86076:CDS | 25.0% |
| AAACATGCCTAAAAAGATAG+TGG | - | chr6.3:8543974-8543993 | MS.gene86076:CDS | 30.0% | |
| AAATGTTGTCCATGTTGTAA+CGG | - | chr6.3:8544754-8544773 | MS.gene86076:CDS | 30.0% | |
| AAGATGACAAAGAAAGAGAA+AGG | - | chr6.3:8545320-8545339 | MS.gene86076:CDS | 30.0% | |
| AAGTTTAGTATGTTCCTCTT+GGG | + | chr6.3:8544614-8544633 | None:intergenic | 30.0% | |
| ACAACATTGTATAACAAGGA+TGG | - | chr6.3:8545585-8545604 | MS.gene86076:CDS | 30.0% | |
| ACTTGAAGATTTCGAAAAAC+AGG | - | chr6.3:8545645-8545664 | MS.gene86076:CDS | 30.0% | |
| ATGCTTATATGGCAAATCAT+TGG | - | chr6.3:8545457-8545476 | MS.gene86076:CDS | 30.0% | |
| CATCCAATATCAAAGAAACT+CGG | + | chr6.3:8544482-8544501 | None:intergenic | 30.0% | |
| GATAAGAATGTTCAAATCCA+AGG | - | chr6.3:8545078-8545097 | MS.gene86076:CDS | 30.0% | |
| GCAAATACGATTAAGTATCA+AGG | + | chr6.3:8545898-8545917 | None:intergenic | 30.0% | |
| GTCTACAACATTGTATAACA+AGG | - | chr6.3:8545581-8545600 | MS.gene86076:CDS | 30.0% | |
| TATTTACTAACTTTCCCAAG+AGG | - | chr6.3:8544597-8544616 | MS.gene86076:intron | 30.0% | |
| TCACTTGATCTTAAACTACA+TGG | - | chr6.3:8544035-8544054 | MS.gene86076:intron | 30.0% | |
| TGCATGATGAAAATGCTAAT+GGG | - | chr6.3:8546130-8546149 | MS.gene86076:intron | 30.0% | |
| TTATATGGCAAATCATTGGT+GGG | - | chr6.3:8545461-8545480 | MS.gene86076:CDS | 30.0% | |
| TTCAAAAAGAATGTTCCCTT+TGG | + | chr6.3:8544650-8544669 | None:intergenic | 30.0% | |
| TTCGTCAACTTAATATCTTC+CGG | + | chr6.3:8544515-8544534 | None:intergenic | 30.0% | |
| TTGCATGATGAAAATGCTAA+TGG | - | chr6.3:8546129-8546148 | MS.gene86076:intron | 30.0% | |
| ! | GAAAAACAGGCTAATCATTT+TGG | - | chr6.3:8545658-8545677 | MS.gene86076:CDS | 30.0% |
| ! | GTTTAAGACTATGTGTGATT+TGG | - | chr6.3:8544427-8544446 | MS.gene86076:CDS | 30.0% |
| ! | TACAATGGGTTTGTGAAAAT+GGG | - | chr6.3:8543869-8543888 | MS.gene86076:CDS | 30.0% |
| !! | TAAGTTGACGAATGAAGTTT+TGG | - | chr6.3:8544523-8544542 | MS.gene86076:intron | 30.0% |
| !! | TGAGAAACTCTTTAAGATGA+TGG | - | chr6.3:8544703-8544722 | MS.gene86076:CDS | 30.0% |
| AAAAGAAAAGGCGGTAAAGA+TGG | - | chr6.3:8544251-8544270 | MS.gene86076:CDS | 35.0% | |
| AACCATGGGTTTCATTTATG+AGG | - | chr6.3:8545255-8545274 | MS.gene86076:CDS | 35.0% | |
| AGACACGAATTGCAAAATTC+TGG | + | chr6.3:8545765-8545784 | None:intergenic | 35.0% | |
| CAAGTTTAGTATGTTCCTCT+TGG | + | chr6.3:8544615-8544634 | None:intergenic | 35.0% | |
| CAATGCTATACCAGTTGAAA+TGG | - | chr6.3:8544391-8544410 | MS.gene86076:CDS | 35.0% | |
| CAGGACTATAGTGAAATTGA+GGG | + | chr6.3:8545531-8545550 | None:intergenic | 35.0% | |
| CGAGTTTCTTTGATATTGGA+TGG | - | chr6.3:8544480-8544499 | MS.gene86076:CDS | 35.0% | |
| CTAATGTCATCTCTAAATCC+AGG | + | chr6.3:8545550-8545569 | None:intergenic | 35.0% | |
| CTATTGCTACTCTTCACAAA+AGG | - | chr6.3:8544971-8544990 | MS.gene86076:CDS | 35.0% | |
| CTCATGAATCTCTTTCAAAG+TGG | + | chr6.3:8544207-8544226 | None:intergenic | 35.0% | |
| CTTATATGGCAAATCATTGG+TGG | - | chr6.3:8545460-8545479 | MS.gene86076:CDS | 35.0% | |
| GAAAATGTTGAAGCTTGTGA+GGG | - | chr6.3:8544140-8544159 | MS.gene86076:CDS | 35.0% | |
| GATAGTTTCAAGAGAAAGAG+AGG | - | chr6.3:8544290-8544309 | MS.gene86076:CDS | 35.0% | |
| GATGAATGGGAAATACATTG+AGG | - | chr6.3:8545129-8545148 | MS.gene86076:CDS | 35.0% | |
| GCATGATGAAAATGCTAATG+GGG | - | chr6.3:8546131-8546150 | MS.gene86076:intron | 35.0% | |
| GGAGTAGGTGAAAAAAGAAA+AGG | - | chr6.3:8544239-8544258 | MS.gene86076:CDS | 35.0% | |
| GGCAAAATATGTTGTTGAAG+TGG | - | chr6.3:8543995-8544014 | MS.gene86076:CDS | 35.0% | |
| GTAGGTGAAAAAAGAAAAGG+CGG | - | chr6.3:8544242-8544261 | MS.gene86076:CDS | 35.0% | |
| GTGTATATTCCGTTACAACA+TGG | + | chr6.3:8544766-8544785 | None:intergenic | 35.0% | |
| TATTCACAAAGCGACACTTA+TGG | - | chr6.3:8544898-8544917 | MS.gene86076:CDS | 35.0% | |
| TATTGATGCGTCTGATATGT+TGG | - | chr6.3:8544673-8544692 | MS.gene86076:CDS | 35.0% | |
| TCAATCCTAGATCTTTCTTC+AGG | + | chr6.3:8545619-8545638 | None:intergenic | 35.0% | |
| TCACTTTCTACCATTTCAAC+TGG | + | chr6.3:8544404-8544423 | None:intergenic | 35.0% | |
| TCATAAATGAAACCCATGGT+TGG | + | chr6.3:8545256-8545275 | None:intergenic | 35.0% | |
| TGAAAGAGATTCATGAGGAA+GGG | - | chr6.3:8544210-8544229 | MS.gene86076:CDS | 35.0% | |
| TGTTGTCTTCATGAGAACAA+AGG | - | chr6.3:8545049-8545068 | MS.gene86076:CDS | 35.0% | |
| TTATCATCTTACCATCTCGA+AGG | + | chr6.3:8545833-8545852 | None:intergenic | 35.0% | |
| TTGAAAGAGATTCATGAGGA+AGG | - | chr6.3:8544209-8544228 | MS.gene86076:CDS | 35.0% | |
| TTGTTAGTGAACAGTCCAAA+GGG | - | chr6.3:8544632-8544651 | MS.gene86076:CDS | 35.0% | |
| TTTATTCAGAGGATTCTCTC+AGG | - | chr6.3:8544945-8544964 | MS.gene86076:CDS | 35.0% | |
| ! | AAACGAAGCACTTCAAGTAT+AGG | + | chr6.3:8545214-8545233 | None:intergenic | 35.0% |
| ! | CACTTTGAAAGAGATTCATG+AGG | - | chr6.3:8544205-8544224 | MS.gene86076:CDS | 35.0% |
| ! | CTACAATGGGTTTGTGAAAA+TGG | - | chr6.3:8543868-8543887 | MS.gene86076:CDS | 35.0% |
| ! | TATACTTGAAGTGCTTCGTT+TGG | - | chr6.3:8545213-8545232 | MS.gene86076:CDS | 35.0% |
| !! | ATAAGTGTCGCTTTGTGAAT+AGG | + | chr6.3:8544899-8544918 | None:intergenic | 35.0% |
| !! | TGTGATTTGGTTTCAAGACA+TGG | - | chr6.3:8544440-8544459 | MS.gene86076:CDS | 35.0% |
| !!! | GAACATTTGTTTTGCAGTCT+TGG | - | chr6.3:8545388-8545407 | MS.gene86076:CDS | 35.0% |
| AAATATCCTGCAGCATGCAA+AGG | + | chr6.3:8545502-8545521 | None:intergenic | 40.0% | |
| AAGCTATAGAGGAGATACAG+AGG | - | chr6.3:8545287-8545306 | MS.gene86076:CDS | 40.0% | |
| AATATCCTGCAGCATGCAAA+GGG | + | chr6.3:8545501-8545520 | None:intergenic | 40.0% | |
| AGTTCGCAAAGACGATGAAT+GGG | - | chr6.3:8545116-8545135 | MS.gene86076:CDS | 40.0% | |
| ATGACGTTGTTGAAGAGGTT+GGG | - | chr6.3:8544726-8544745 | MS.gene86076:CDS | 40.0% | |
| ATTCGTGTCTTATGCTTGAC+AGG | - | chr6.3:8545775-8545794 | MS.gene86076:CDS | 40.0% | |
| CAAACTCTCCTTACTATCGA+CGG | + | chr6.3:8544330-8544349 | None:intergenic | 40.0% | |
| CCAATATCAAAGAAACTCGG+TGG | + | chr6.3:8544479-8544498 | None:intergenic | 40.0% | |
| CCAATCCTGAAGAAAGATCT+AGG | - | chr6.3:8545611-8545630 | MS.gene86076:CDS | 40.0% | |
| CCACCGAGTTTCTTTGATAT+TGG | - | chr6.3:8544476-8544495 | MS.gene86076:CDS | 40.0% | |
| CCAGGACTATAGTGAAATTG+AGG | + | chr6.3:8545532-8545551 | None:intergenic | 40.0% | |
| CCTAGATCTTTCTTCAGGAT+TGG | + | chr6.3:8545614-8545633 | None:intergenic | 40.0% | |
| CCTCAATTTCACTATAGTCC+TGG | - | chr6.3:8545529-8545548 | MS.gene86076:CDS | 40.0% | |
| CTTGTTAGTGAACAGTCCAA+AGG | - | chr6.3:8544631-8544650 | MS.gene86076:CDS | 40.0% | |
| GAAAGGTAAATATGTTCGGC+AGG | - | chr6.3:8545337-8545356 | MS.gene86076:CDS | 40.0% | |
| GAATGTTCAAATCCAAGGAG+TGG | - | chr6.3:8545083-8545102 | MS.gene86076:CDS | 40.0% | |
| GAGCTAAATCTTGATGCCAA+TGG | - | chr6.3:8546024-8546043 | MS.gene86076:intron | 40.0% | |
| GATGAAAACAGAGATGACGA+TGG | - | chr6.3:8546159-8546178 | MS.gene86076:intron | 40.0% | |
| GATGGATATGAAGACGAAGA+TGG | - | chr6.3:8546189-8546208 | MS.gene86076:intron | 40.0% | |
| GGAAAATGTTGAAGCTTGTG+AGG | - | chr6.3:8544139-8544158 | MS.gene86076:CDS | 40.0% | |
| GGGTTTCATTTATGAGGCAA+TGG | - | chr6.3:8545261-8545280 | MS.gene86076:CDS | 40.0% | |
| GGTACACGCTATGAATTTGA+AGG | - | chr6.3:8545927-8545946 | MS.gene86076:CDS | 40.0% | |
| TAGTAAGGAGAGTTTGAGTG+AGG | - | chr6.3:8544334-8544353 | MS.gene86076:CDS | 40.0% | |
| TCAATCGAGAAACCAACCAT+GGG | - | chr6.3:8545241-8545260 | MS.gene86076:CDS | 40.0% | |
| TGAGGTGAAGAAGGAAATGT+TGG | - | chr6.3:8544172-8544191 | MS.gene86076:CDS | 40.0% | |
| TGCCTCATAAATGAAACCCA+TGG | + | chr6.3:8545260-8545279 | None:intergenic | 40.0% | |
| TGGAAGAACATAGAGCTATG+TGG | - | chr6.3:8544543-8544562 | MS.gene86076:intron | 40.0% | |
| TGGGAAATACATTGAGGATG+CGG | - | chr6.3:8545135-8545154 | MS.gene86076:CDS | 40.0% | |
| TTCAATCGAGAAACCAACCA+TGG | - | chr6.3:8545240-8545259 | MS.gene86076:CDS | 40.0% | |
| TTGGTTTCAAGACATGGTGT+AGG | - | chr6.3:8544446-8544465 | MS.gene86076:CDS | 40.0% | |
| ! | ATTCATGAGGAAGGGTATGT+TGG | - | chr6.3:8544218-8544237 | MS.gene86076:CDS | 40.0% |
| ! | CGATTTGCATGTCACTTAAC+TGG | - | chr6.3:8544113-8544132 | MS.gene86076:intron | 40.0% |
| ! | CGGTTTTGCACAAAAGGTTT+TGG | - | chr6.3:8545155-8545174 | MS.gene86076:CDS | 40.0% |
| ! | TGCATGTCACTTAACTGGAA+AGG | - | chr6.3:8544118-8544137 | MS.gene86076:intron | 40.0% |
| ! | TGTGATAATGTTGTAACCGG+CGG | - | chr6.3:8544083-8544102 | MS.gene86076:intron | 40.0% |
| AAAGATGCCCACCAAATTGG+TGG | + | chr6.3:8545721-8545740 | None:intergenic | 45.0% | |
| AAAGGCGGTAAAGATGGTGT+TGG | - | chr6.3:8544257-8544276 | MS.gene86076:CDS | 45.0% | |
| AAGGCGGTAAAGATGGTGTT+GGG | - | chr6.3:8544258-8544277 | MS.gene86076:CDS | 45.0% | |
| AATGATGCTGCAACACTGTG+GGG | - | chr6.3:8544868-8544887 | MS.gene86076:CDS | 45.0% | |
| ACAAGACTCCGTCGATAGTA+AGG | - | chr6.3:8544319-8544338 | MS.gene86076:CDS | 45.0% | |
| ACATGGTGTATCTGAATCCG+AGG | + | chr6.3:8546076-8546095 | None:intergenic | 45.0% | |
| AGACGTTGAAGGTTCAGATG+TGG | - | chr6.3:8546047-8546066 | MS.gene86076:intron | 45.0% | |
| AGAGCTATGTGGAAGATCAC+TGG | - | chr6.3:8544554-8544573 | MS.gene86076:intron | 45.0% | |
| CCAATAGCCGTAATTACTGC+TGG | - | chr6.3:8545685-8545704 | MS.gene86076:CDS | 45.0% | |
| CCAATGCAATGTGTTGCACA+AGG | + | chr6.3:8544848-8544867 | None:intergenic | 45.0% | |
| CCAGCAGTAATTACGGCTAT+TGG | + | chr6.3:8545688-8545707 | None:intergenic | 45.0% | |
| CCTTGTGCAACACATTGCAT+TGG | - | chr6.3:8544845-8544864 | MS.gene86076:CDS | 45.0% | |
| CGAAAAGGACTAGGCTGTAT+TGG | - | chr6.3:8544819-8544838 | MS.gene86076:CDS | 45.0% | |
| CTCCTCACCAGCAGTAATTA+CGG | + | chr6.3:8545695-8545714 | None:intergenic | 45.0% | |
| CTTATGGGGGTGAACGTAAT+CGG | - | chr6.3:8545803-8545822 | MS.gene86076:CDS | 45.0% | |
| CTTGACAGGCAGTTCTTATG+GGG | - | chr6.3:8545789-8545808 | MS.gene86076:CDS | 45.0% | |
| GAATGATGCTGCAACACTGT+GGG | - | chr6.3:8544867-8544886 | MS.gene86076:CDS | 45.0% | |
| GAGTTCGCAAAGACGATGAA+TGG | - | chr6.3:8545115-8545134 | MS.gene86076:CDS | 45.0% | |
| GATGACGATGGAGATGAAGA+TGG | - | chr6.3:8546171-8546190 | MS.gene86076:intron | 45.0% | |
| GATGACGTTGTTGAAGAGGT+TGG | - | chr6.3:8544725-8544744 | MS.gene86076:CDS | 45.0% | |
| GATGGATGACGTTGTTGAAG+AGG | - | chr6.3:8544721-8544740 | MS.gene86076:CDS | 45.0% | |
| GCTTGACAGGCAGTTCTTAT+GGG | - | chr6.3:8545788-8545807 | MS.gene86076:CDS | 45.0% | |
| GGCAATGGTGAAAGCTATAG+AGG | - | chr6.3:8545276-8545295 | MS.gene86076:CDS | 45.0% | |
| TAAGGAGAGTTTGAGTGAGG+AGG | - | chr6.3:8544337-8544356 | MS.gene86076:CDS | 45.0% | |
| TCAGCTAGACACTTCAGACA+TGG | + | chr6.3:8546093-8546112 | None:intergenic | 45.0% | |
| TGAACCTTCAACGTCTCCAT+TGG | + | chr6.3:8546043-8546062 | None:intergenic | 45.0% | |
| TGACGTTGTTGAAGAGGTTG+GGG | - | chr6.3:8544727-8544746 | MS.gene86076:CDS | 45.0% | |
| TGCAAATCGATAAAACCCGC+CGG | + | chr6.3:8544102-8544121 | None:intergenic | 45.0% | |
| TGCTTGACAGGCAGTTCTTA+TGG | - | chr6.3:8545787-8545806 | MS.gene86076:CDS | 45.0% | |
| TTGACAGGCAGTTCTTATGG+GGG | - | chr6.3:8545790-8545809 | MS.gene86076:CDS | 45.0% | |
| ! | AAGATGGTGTTGGGAGGAAT+AGG | - | chr6.3:8544267-8544286 | MS.gene86076:CDS | 45.0% |
| ! | AGATGGTGTTGGGAGGAATA+GGG | - | chr6.3:8544268-8544287 | MS.gene86076:CDS | 45.0% |
| ! | AGGATGCGGTTTTGCACAAA+AGG | - | chr6.3:8545149-8545168 | MS.gene86076:CDS | 45.0% |
| ! | GATCACTGGTTGCAGCATAA+TGG | - | chr6.3:8544568-8544587 | MS.gene86076:intron | 45.0% |
| ! | GTGATAATGTTGTAACCGGC+GGG | - | chr6.3:8544084-8544103 | MS.gene86076:intron | 45.0% |
| ! | TCTGAAGTGTCTAGCTGATG+CGG | - | chr6.3:8546095-8546114 | MS.gene86076:intron | 45.0% |
| !! | TGTTGATGGCGAAAAGGACT+AGG | - | chr6.3:8544810-8544829 | MS.gene86076:CDS | 45.0% |
| !! | TGTTGGTGATGAGGTGAAGA+AGG | - | chr6.3:8544163-8544182 | MS.gene86076:CDS | 45.0% |
| AGCCGTAATTACTGCTGGTG+AGG | - | chr6.3:8545690-8545709 | MS.gene86076:CDS | 50.0% | |
| AGGAGACTCCACCAATTTGG+TGG | - | chr6.3:8545710-8545729 | MS.gene86076:CDS | 50.0% | |
| AGGTTCAGATGTGGATGCCT+CGG | - | chr6.3:8546056-8546075 | MS.gene86076:intron | 50.0% | |
| CATACTATGTAGCTGCCGCT+GGG | - | chr6.3:8544786-8544805 | MS.gene86076:CDS | 50.0% | |
| GATGCCAATGGAGACGTTGA+AGG | - | chr6.3:8546036-8546055 | MS.gene86076:intron | 50.0% | |
| GCGAAAGATGCCCACCAAAT+TGG | + | chr6.3:8545724-8545743 | None:intergenic | 50.0% | |
| GGAATGATGCTGCAACACTG+TGG | - | chr6.3:8544866-8544885 | MS.gene86076:CDS | 50.0% | |
| GGAGACTCCACCAATTTGGT+GGG | - | chr6.3:8545711-8545730 | MS.gene86076:CDS | 50.0% | |
| GGCAAATCATTGGTGGGACA+TGG | - | chr6.3:8545467-8545486 | MS.gene86076:CDS | 50.0% | |
| GTGAGGAGACTCCACCAATT+TGG | - | chr6.3:8545707-8545726 | MS.gene86076:CDS | 50.0% | |
| TAATCGGAAGGCCTTCGAGA+TGG | - | chr6.3:8545819-8545838 | MS.gene86076:CDS | 50.0% | |
| TTTCGCCATCAACATCCCAG+CGG | + | chr6.3:8544804-8544823 | None:intergenic | 50.0% | |
| ! | CTGAAGTGTCTAGCTGATGC+GGG | - | chr6.3:8546096-8546115 | MS.gene86076:intron | 50.0% |
| ! | GAGGAAGGGTATGTTGGAGT+AGG | - | chr6.3:8544224-8544243 | MS.gene86076:CDS | 50.0% |
| ! | GTTGAAGCTTGTGAGGGTGT+TGG | - | chr6.3:8544146-8544165 | MS.gene86076:CDS | 50.0% |
| ! | TGAAGTGTCTAGCTGATGCG+GGG | - | chr6.3:8546097-8546116 | MS.gene86076:intron | 50.0% |
| !! | CTGGGATGTTGATGGCGAAA+AGG | - | chr6.3:8544804-8544823 | MS.gene86076:CDS | 50.0% |
| !! | TTGTGAGGGTGTTGGTGATG+AGG | - | chr6.3:8544154-8544173 | MS.gene86076:CDS | 50.0% |
| CATCGTCTTTGCGAACTCGC+TGG | + | chr6.3:8545113-8545132 | None:intergenic | 55.0% | |
| CATTGCCCTTTGCATGCTGC+AGG | - | chr6.3:8545493-8545512 | MS.gene86076:CDS | 55.0% | |
| CCAGCGGCAGCTACATAGTA+TGG | + | chr6.3:8544788-8544807 | None:intergenic | 55.0% | |
| CCATACTATGTAGCTGCCGC+TGG | - | chr6.3:8544785-8544804 | MS.gene86076:CDS | 55.0% | |
| CTGCAGCATGCAAAGGGCAA+TGG | + | chr6.3:8545495-8545514 | None:intergenic | 55.0% | |
| TGGGGGTGAACGTAATCGGA+AGG | - | chr6.3:8545807-8545826 | MS.gene86076:CDS | 55.0% | |
| ! | GCGGTAAAGATGGTGTTGGG+AGG | - | chr6.3:8544261-8544280 | MS.gene86076:CDS | 55.0% |
| AGCTGCCGCTGGGATGTTGA+TGG | - | chr6.3:8544796-8544815 | MS.gene86076:CDS | 60.0% | |
| AGGCATGTCGAGCGGTTGCA+AGG | - | chr6.3:8544357-8544376 | MS.gene86076:CDS | 60.0% | |
| CTCGCTGGACTTCCACTCCT+TGG | + | chr6.3:8545098-8545117 | None:intergenic | 60.0% | |
| ! | GAGTGAGGAGGCATGTCGAG+CGG | - | chr6.3:8544349-8544368 | MS.gene86076:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 8543743 | 8546224 | 8543743 | ID=MS.gene86076 |
| chr6.3 | mRNA | 8543743 | 8546224 | 8543743 | ID=MS.gene86076.t1;Parent=MS.gene86076 |
| chr6.3 | exon | 8546221 | 8546224 | 8546221 | ID=MS.gene86076.t1.exon1;Parent=MS.gene86076.t1 |
| chr6.3 | CDS | 8546221 | 8546224 | 8546221 | ID=cds.MS.gene86076.t1;Parent=MS.gene86076.t1 |
| chr6.3 | exon | 8544626 | 8546009 | 8544626 | ID=MS.gene86076.t1.exon2;Parent=MS.gene86076.t1 |
| chr6.3 | CDS | 8544626 | 8546009 | 8544626 | ID=cds.MS.gene86076.t1;Parent=MS.gene86076.t1 |
| chr6.3 | exon | 8544127 | 8544514 | 8544127 | ID=MS.gene86076.t1.exon3;Parent=MS.gene86076.t1 |
| chr6.3 | CDS | 8544127 | 8544514 | 8544127 | ID=cds.MS.gene86076.t1;Parent=MS.gene86076.t1 |
| chr6.3 | exon | 8543743 | 8544039 | 8543743 | ID=MS.gene86076.t1.exon4;Parent=MS.gene86076.t1 |
| chr6.3 | CDS | 8543743 | 8544039 | 8543743 | ID=cds.MS.gene86076.t1;Parent=MS.gene86076.t1 |
| Gene Sequence |
| Protein sequence |
