Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86239.t1 | XP_003613090.1 | 96.8 | 533 | 14 | 1 | 1 | 530 | 1 | 533 | 3.50E-306 | 1060.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86239.t1 | Q8VYN6 | 78.5 | 512 | 108 | 2 | 20 | 530 | 27 | 537 | 8.2e-240 | 830.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86239.t1 | G7JXR3 | 96.8 | 533 | 14 | 1 | 1 | 530 | 1 | 533 | 2.5e-306 | 1060.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050442 | MS.gene86239 | 0.801349 | 9.39E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene86239 | 0.803132 | 4.03E-49 | -1.69E-46 |
| MS.gene056873 | MS.gene86239 | 0.806826 | 6.81E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40737 | MS.gene86239 | PPI |
| MS.gene86239 | MS.gene014596 | PPI |
| MS.gene40242 | MS.gene86239 | PPI |
| MS.gene86239 | MS.gene69076 | PPI |
| MS.gene014594 | MS.gene86239 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86239.t1 | MTR_5g032570 | 98.124 | 533 | 7 | 1 | 1 | 530 | 1 | 533 | 0.0 | 1085 |
| MS.gene86239.t1 | MTR_8g069040 | 80.534 | 524 | 89 | 3 | 20 | 530 | 6 | 529 | 0.0 | 878 |
| MS.gene86239.t1 | MTR_1g090300 | 47.380 | 458 | 208 | 7 | 79 | 530 | 90 | 520 | 7.73e-135 | 402 |
| MS.gene86239.t1 | MTR_6g090130 | 52.507 | 379 | 172 | 4 | 158 | 530 | 74 | 450 | 6.20e-134 | 398 |
| MS.gene86239.t1 | MTR_3g110395 | 52.507 | 379 | 172 | 4 | 158 | 530 | 78 | 454 | 1.02e-133 | 398 |
| MS.gene86239.t1 | MTR_8g102190 | 51.842 | 380 | 174 | 4 | 158 | 530 | 77 | 454 | 1.91e-132 | 394 |
| MS.gene86239.t1 | MTR_2g100710 | 45.098 | 459 | 217 | 6 | 79 | 530 | 23 | 453 | 8.79e-130 | 386 |
| MS.gene86239.t1 | MTR_4g134290 | 45.238 | 378 | 200 | 3 | 160 | 530 | 81 | 458 | 7.51e-116 | 350 |
| MS.gene86239.t1 | MTR_8g102190 | 52.174 | 299 | 134 | 4 | 158 | 449 | 77 | 373 | 5.47e-100 | 306 |
| MS.gene86239.t1 | MTR_8g102190 | 53.191 | 282 | 124 | 3 | 159 | 434 | 78 | 357 | 1.49e-96 | 298 |
| MS.gene86239.t1 | MTR_2g100710 | 44.904 | 363 | 165 | 7 | 79 | 434 | 23 | 357 | 4.60e-95 | 294 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86239.t1 | AT2G22480 | 78.516 | 512 | 108 | 2 | 20 | 530 | 27 | 537 | 0.0 | 838 |
| MS.gene86239.t1 | AT5G56630 | 53.050 | 377 | 171 | 3 | 158 | 530 | 77 | 451 | 5.37e-137 | 405 |
| MS.gene86239.t1 | AT4G26270 | 53.018 | 381 | 166 | 5 | 158 | 530 | 77 | 452 | 4.00e-135 | 401 |
| MS.gene86239.t1 | AT4G32840 | 52.926 | 376 | 172 | 4 | 158 | 530 | 78 | 451 | 5.19e-134 | 397 |
| MS.gene86239.t1 | AT4G29220 | 45.969 | 459 | 212 | 7 | 79 | 530 | 24 | 453 | 1.50e-133 | 396 |
| MS.gene86239.t1 | AT5G61580 | 51.715 | 379 | 175 | 4 | 158 | 530 | 128 | 504 | 2.31e-131 | 393 |
| MS.gene86239.t1 | AT5G61580 | 52.231 | 381 | 169 | 6 | 158 | 530 | 128 | 503 | 1.74e-130 | 390 |
| MS.gene86239.t1 | AT5G47810 | 44.498 | 418 | 208 | 6 | 121 | 529 | 36 | 438 | 5.48e-117 | 353 |
Find 129 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGCTGCCTTTACTTCTTC+TGG | 0.234836 | 5.1:+23094549 | None:intergenic |
| CTCTCAGGTGGCAGCCTATT+AGG | 0.270534 | 5.1:-23093935 | MS.gene86239:CDS |
| CGGATCAAAGTGTGTGTTAT+TGG | 0.270583 | 5.1:-23093459 | MS.gene86239:CDS |
| GAGATTGTTGGTATTCCTTT+TGG | 0.274193 | 5.1:-23094143 | MS.gene86239:CDS |
| ACTTACATACCTCGGGAATT+AGG | 0.276615 | 5.1:+23093131 | None:intergenic |
| AATCGGGATTGTGAAATTAA+TGG | 0.277060 | 5.1:-23093215 | MS.gene86239:CDS |
| CCATGGAAGTCTCTAGTTAT+AGG | 0.279905 | 5.1:+23096041 | None:intergenic |
| TAGTGAAATTGTGGATAGTT+TGG | 0.287015 | 5.1:-23093888 | MS.gene86239:CDS |
| GCTTTGGTATTGCAGGTTCA+TGG | 0.290416 | 5.1:-23091176 | MS.gene86239:intron |
| CTGATCCCTTTGATTCTATA+AGG | 0.291613 | 5.1:+23092983 | None:intergenic |
| CTATTGATGGACAAAACTTT+TGG | 0.291628 | 5.1:-23093408 | MS.gene86239:CDS |
| GAAGGGTGGTGGCGAGGTTA+GGG | 0.292280 | 5.1:+23096838 | None:intergenic |
| GAAGAGACGATGGTTGGTTT+TGG | 0.310529 | 5.1:+23096770 | None:intergenic |
| GCATTGATCCTGGCTGTAAT+TGG | 0.311570 | 5.1:-23094902 | MS.gene86239:CDS |
| TGAAGGGTGGTGGCGAGGTT+AGG | 0.325848 | 5.1:+23096837 | None:intergenic |
| CAGGTTCATGGTGCATTTGC+TGG | 0.329427 | 5.1:-23091164 | MS.gene86239:CDS |
| CGATGCCACATTCGACTGTT+TGG | 0.331058 | 5.1:+23091053 | None:intergenic |
| TTCCATGGGAATTATGATTC+TGG | 0.345307 | 5.1:-23096026 | MS.gene86239:CDS |
| TGCGATATTACTTCGGTGAT+TGG | 0.351808 | 5.1:+23091092 | None:intergenic |
| GTAATCACACTTGAAATATA+TGG | 0.362471 | 5.1:-23094173 | MS.gene86239:CDS |
| CTCTTTGTGTTGGGTGGAAA+TGG | 0.365286 | 5.1:-23093702 | MS.gene86239:CDS |
| GGCGCTCAGTGCATTGATCC+TGG | 0.376773 | 5.1:-23094912 | MS.gene86239:CDS |
| TTAAACTTATCTTTCCAATC+AGG | 0.379826 | 5.1:+23096672 | None:intergenic |
| TTGATTACAATGATCCTGAT+TGG | 0.380703 | 5.1:-23096686 | MS.gene86239:CDS |
| AGACAATGATATTCTATTGA+TGG | 0.383675 | 5.1:-23093421 | MS.gene86239:CDS |
| AATGCTAAACTTGGAGATAT+CGG | 0.387969 | 5.1:-23092755 | MS.gene86239:CDS |
| TTGATCCAACATACATGATT+CGG | 0.395697 | 5.1:-23092269 | MS.gene86239:CDS |
| AGTAATATCGCATCCTCAAT+TGG | 0.405969 | 5.1:-23091081 | MS.gene86239:CDS |
| CTCCGCGTGAAACTCCTAAT+AGG | 0.411712 | 5.1:+23093921 | None:intergenic |
| ATCAACATGCTCTTTGTGTT+GGG | 0.422869 | 5.1:-23093711 | MS.gene86239:CDS |
| AATAATAGCAAACCTCTTGT+TGG | 0.426233 | 5.1:+23092723 | None:intergenic |
| ATGCTAAACTTGGAGATATC+GGG | 0.438212 | 5.1:-23092754 | MS.gene86239:CDS |
| ATCGGGATTGTGAAATTAAT+GGG | 0.439443 | 5.1:-23093214 | MS.gene86239:CDS |
| TCAAATGAAGTCGGGTTGAC+CGG | 0.450420 | 5.1:+23091016 | None:intergenic |
| TGTTAGAGACTTTGAATGAA+TGG | 0.455225 | 5.1:+23096748 | None:intergenic |
| TGATCCAACATACATGATTC+GGG | 0.455405 | 5.1:-23092268 | MS.gene86239:CDS |
| ACTAATGATACCGATGCCTC+AGG | 0.456950 | 5.1:-23092779 | MS.gene86239:CDS |
| CATAGTGCATATCACGGAAT+CGG | 0.460277 | 5.1:-23093232 | MS.gene86239:CDS |
| CTGTTTGGATCCACCAATTG+AGG | 0.462985 | 5.1:+23091068 | None:intergenic |
| GAACGCATAGAAGAAGCATC+AGG | 0.466750 | 5.1:+23096600 | None:intergenic |
| CAAGTACCTTATAGAATCAA+AGG | 0.468839 | 5.1:-23092989 | MS.gene86239:CDS |
| CATTGATCCTGGCTGTAATT+GGG | 0.472888 | 5.1:-23094901 | MS.gene86239:CDS |
| ACTTGTGGAGGACTGTGTCC+TGG | 0.474252 | 5.1:-23094522 | MS.gene86239:CDS |
| GAAAATAATCAAATGAAGTC+GGG | 0.476259 | 5.1:+23091008 | None:intergenic |
| AAGGTTCCTTTCAATTTACA+TGG | 0.477045 | 5.1:-23093036 | MS.gene86239:CDS |
| AATAAATTCTGCATATATAG+AGG | 0.477305 | 5.1:-23093352 | MS.gene86239:intron |
| ATCAATCTGTCCACTGGCTA+AGG | 0.477541 | 5.1:+23093159 | None:intergenic |
| GGAGTTTCACGCGGAGGACC+TGG | 0.478048 | 5.1:-23093914 | MS.gene86239:CDS |
| TTCAATTTACATGGACCTCA+TGG | 0.479511 | 5.1:-23093027 | MS.gene86239:CDS |
| GGTGCATTTGCTGGATATAG+TGG | 0.480453 | 5.1:-23091155 | MS.gene86239:CDS |
| GATCAACATGCTCTTTGTGT+TGG | 0.483619 | 5.1:-23093712 | MS.gene86239:CDS |
| GTTTGTGTGGCAGAGGGAGC+AGG | 0.484756 | 5.1:-23092955 | MS.gene86239:CDS |
| TGTGGCAGAGGGAGCAGGAC+AGG | 0.492036 | 5.1:-23092950 | MS.gene86239:intron |
| GCCTCAGGGAATGCTAAACT+TGG | 0.493945 | 5.1:-23092764 | MS.gene86239:CDS |
| GTTGATTGATTGCAGGAAAG+AGG | 0.494138 | 5.1:-23093735 | MS.gene86239:intron |
| GTTCAAAACATTCATCTCTC+AGG | 0.497136 | 5.1:-23093950 | MS.gene86239:CDS |
| CAAAGAGTTGATGGAAATAC+CGG | 0.500018 | 5.1:-23094102 | MS.gene86239:intron |
| ATAGTGCATATCACGGAATC+GGG | 0.501886 | 5.1:-23093231 | MS.gene86239:CDS |
| TCTTAACGATGTCATTAGAC+AGG | 0.502961 | 5.1:-23094499 | MS.gene86239:intron |
| CTTCAAACCAGAAGAAGTAA+AGG | 0.503634 | 5.1:-23094556 | MS.gene86239:CDS |
| AGAAAATAATCAAATGAAGT+CGG | 0.506105 | 5.1:+23091007 | None:intergenic |
| TAATGACAGAGTGCTTCTTA+AGG | 0.510674 | 5.1:-23095976 | MS.gene86239:intron |
| TTTAGCATTCCCTGAGGCAT+CGG | 0.516712 | 5.1:+23092769 | None:intergenic |
| AGCTGTAGTTTGTGTGGCAG+AGG | 0.521624 | 5.1:-23092962 | MS.gene86239:CDS |
| ACCTGGAGTTAGTGAAATTG+TGG | 0.529574 | 5.1:-23093897 | MS.gene86239:CDS |
| TTGATTGATTGCAGGAAAGA+GGG | 0.531805 | 5.1:-23093734 | MS.gene86239:intron |
| ATTATGATTCTGGTGAGGAA+TGG | 0.538440 | 5.1:-23096016 | MS.gene86239:CDS |
| CATTCATCACCTACATCTGC+TGG | 0.539977 | 5.1:-23094933 | MS.gene86239:CDS |
| CAGCAGATGTAGGTGATGAA+TGG | 0.540591 | 5.1:+23094934 | None:intergenic |
| AAATTAATGGGCCGTAGCAG+TGG | 0.542200 | 5.1:-23093202 | MS.gene86239:CDS |
| AAGGCAGCCATTGTTACTTG+TGG | 0.549028 | 5.1:-23094537 | MS.gene86239:CDS |
| AAGGGTGGTGGCGAGGTTAG+GGG | 0.549303 | 5.1:+23096839 | None:intergenic |
| AACATGCTCTTTGTGTTGGG+TGG | 0.552403 | 5.1:-23093708 | MS.gene86239:CDS |
| CACCAGAATCATAATTCCCA+TGG | 0.554608 | 5.1:+23096024 | None:intergenic |
| GGTGGAAATGGTACACATGC+TGG | 0.556073 | 5.1:-23093690 | MS.gene86239:CDS |
| CACGCCCGAATCATGTATGT+TGG | 0.556320 | 5.1:+23092264 | None:intergenic |
| TGAGGTCCATGTAAATTGAA+AGG | 0.559778 | 5.1:+23093030 | None:intergenic |
| GGATATAGTGGCATTACAGT+AGG | 0.561938 | 5.1:-23091143 | MS.gene86239:CDS |
| TGAAATTGTGGATAGTTTGG+AGG | 0.562109 | 5.1:-23093885 | MS.gene86239:intron |
| CTTCATCATCATCATGTGCA+TGG | 0.564878 | 5.1:-23096819 | MS.gene86239:CDS |
| AAGTACCTTATAGAATCAAA+GGG | 0.565661 | 5.1:-23092988 | MS.gene86239:CDS |
| GCAGCCATTGTTACTTGTGG+AGG | 0.566120 | 5.1:-23094534 | MS.gene86239:CDS |
| TGTTCCACCCAATTACAGCC+AGG | 0.572176 | 5.1:+23094894 | None:intergenic |
| TCCACAATTTCACTAACTCC+AGG | 0.574739 | 5.1:+23093896 | None:intergenic |
| GCATACATCAATCTGTCCAC+TGG | 0.575151 | 5.1:+23093153 | None:intergenic |
| CACTGAGCGCCAGCAGATGT+AGG | 0.576254 | 5.1:+23094924 | None:intergenic |
| CGGGGTTTATATCCAACAAG+AGG | 0.576795 | 5.1:-23092735 | MS.gene86239:intron |
| GATTTCATTTACAGTTGTCA+AGG | 0.579795 | 5.1:-23093979 | MS.gene86239:intron |
| TTGCTATGAATCCACTGCTA+CGG | 0.580298 | 5.1:+23093191 | None:intergenic |
| TGTCGAGCAAATGCTTCAGA+TGG | 0.581648 | 5.1:-23092243 | MS.gene86239:CDS |
| CTAATGATACCGATGCCTCA+GGG | 0.586166 | 5.1:-23092778 | MS.gene86239:CDS |
| CATCGATGCTTAACTTCGAC+CGG | 0.587899 | 5.1:-23091035 | MS.gene86239:CDS |
| TATGGTGTAACTGAGATTGT+TGG | 0.587899 | 5.1:-23094155 | MS.gene86239:CDS |
| GGGAAAATATCAGTAACATG+AGG | 0.589366 | 5.1:+23096621 | None:intergenic |
| CCTATAACTAGAGACTTCCA+TGG | 0.595568 | 5.1:-23096041 | MS.gene86239:CDS |
| GGAAAATATCAGTAACATGA+GGG | 0.596785 | 5.1:+23096622 | None:intergenic |
| TTGAGGATGCGATATTACTT+CGG | 0.597150 | 5.1:+23091085 | None:intergenic |
| CATGCACATGATGATGATGA+AGG | 0.601136 | 5.1:+23096820 | None:intergenic |
| GGGTTCATCGAGCTGGACCT+CGG | 0.602038 | 5.1:-23094590 | MS.gene86239:CDS |
| GCTGTAGTTTGTGTGGCAGA+GGG | 0.603354 | 5.1:-23092961 | MS.gene86239:CDS |
| TGAATGGAAGAGACGATGGT+TGG | 0.610640 | 5.1:+23096764 | None:intergenic |
| CTAATGACATCGTTAAGACC+AGG | 0.614698 | 5.1:+23094504 | None:intergenic |
| TGCTAAACTTGGAGATATCG+GGG | 0.616169 | 5.1:-23092753 | MS.gene86239:CDS |
| GATTCTGGTGAGGAATGGAA+TGG | 0.617100 | 5.1:-23096011 | MS.gene86239:CDS |
| CACTGTACTTGGACAGAATG+CGG | 0.618998 | 5.1:-23092211 | MS.gene86239:intron |
| TCTTTGTGCTTCTTCAACCG+CGG | 0.622748 | 5.1:+23093377 | None:intergenic |
| GGGATCAGCTGTAGTTTGTG+TGG | 0.624112 | 5.1:-23092968 | MS.gene86239:CDS |
| CAGTCCTCCACAAGTAACAA+TGG | 0.624369 | 5.1:+23094530 | None:intergenic |
| GCTGTAATTGGGTGGAACAA+TGG | 0.626331 | 5.1:-23094890 | MS.gene86239:intron |
| CAAAACATTCATCTCTCAGG+TGG | 0.633928 | 5.1:-23093947 | MS.gene86239:CDS |
| AATATCGCATCCTCAATTGG+TGG | 0.636705 | 5.1:-23091078 | MS.gene86239:CDS |
| TGATCCTGGCTGTAATTGGG+TGG | 0.639090 | 5.1:-23094898 | MS.gene86239:CDS |
| ATGCAATCTTCCTTAGCCAG+TGG | 0.639507 | 5.1:-23093169 | MS.gene86239:CDS |
| TGGATCCAAACAGTCGAATG+TGG | 0.644484 | 5.1:-23091058 | MS.gene86239:CDS |
| GATGATGAAGGGTGGTGGCG+AGG | 0.644742 | 5.1:+23096832 | None:intergenic |
| AACGCATAGAAGAAGCATCA+GGG | 0.646346 | 5.1:+23096601 | None:intergenic |
| ATGATGATGATGAAGGGTGG+TGG | 0.647952 | 5.1:+23096827 | None:intergenic |
| CTATAACTAGAGACTTCCAT+GGG | 0.651939 | 5.1:-23096040 | MS.gene86239:CDS |
| TGATGTATGCCTAATTCCCG+AGG | 0.666643 | 5.1:-23093140 | MS.gene86239:intron |
| TAGGCACATAGTGCATATCA+CGG | 0.667976 | 5.1:-23093238 | MS.gene86239:CDS |
| ATGCACATGATGATGATGAA+GGG | 0.671280 | 5.1:+23096821 | None:intergenic |
| AGATGACTCAAAACTCCATG+AGG | 0.675700 | 5.1:+23093012 | None:intergenic |
| TGGGAATTATGATTCTGGTG+AGG | 0.678389 | 5.1:-23096021 | MS.gene86239:CDS |
| TGAATGAATGGAAGAGACGA+TGG | 0.679469 | 5.1:+23096760 | None:intergenic |
| CTATTAGGAGTTTCACGCGG+AGG | 0.683751 | 5.1:-23093920 | MS.gene86239:CDS |
| TGCAAATGCAATTCACGACG+AGG | 0.685123 | 5.1:-23093667 | MS.gene86239:intron |
| CACATGATGATGATGAAGGG+TGG | 0.713897 | 5.1:+23096824 | None:intergenic |
| TCCAAGTTTAGCATTCCCTG+AGG | 0.733572 | 5.1:+23092763 | None:intergenic |
| AGCCTATTAGGAGTTTCACG+CGG | 0.736304 | 5.1:-23093923 | MS.gene86239:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATATAAAATAAAAATCA+CGG | + | chr5.1:23094115-23094134 | None:intergenic | 10.0% |
| !! | TATTAAATAGAAAATAATAC+CGG | + | chr5.1:23094581-23094600 | None:intergenic | 10.0% |
| !!! | AAACTAAAGTATATATTTTT+AGG | + | chr5.1:23091653-23091672 | None:intergenic | 10.0% |
| !!! | TTTAGTTTAAAAAAATAACA+CGG | - | chr5.1:23091665-23091684 | MS.gene86239:intron | 10.0% |
| !! | AAATGCAATTAACTAATATA+AGG | + | chr5.1:23094249-23094268 | None:intergenic | 15.0% |
| !! | AATCAATTTCATTAATAGAA+TGG | + | chr5.1:23094027-23094046 | None:intergenic | 15.0% |
| !! | AATGCAATTAACTAATATAA+GGG | + | chr5.1:23094248-23094267 | None:intergenic | 15.0% |
| !! | ATATATATATACACAACAAT+GGG | + | chr5.1:23095715-23095734 | None:intergenic | 15.0% |
| !! | ATTAAATAGAAAATAATACC+GGG | + | chr5.1:23094580-23094599 | None:intergenic | 15.0% |
| !! | TATATATATATACACAACAA+TGG | + | chr5.1:23095716-23095735 | None:intergenic | 15.0% |
| !!! | AAATCTCTTTCAAAAATTTT+TGG | - | chr5.1:23093482-23093501 | MS.gene86239:intron | 15.0% |
| !!! | AATATTTTACTTGTCTTATT+AGG | - | chr5.1:23094617-23094636 | MS.gene86239:intron | 15.0% |
| !!! | TATATATTTTTAGGCAAATA+GGG | + | chr5.1:23091644-23091663 | None:intergenic | 15.0% |
| !!! | TATGATTTCACTTTTATTAT+TGG | - | chr5.1:23095738-23095757 | MS.gene86239:intron | 15.0% |
| !! | AAATAATATAAAGCTAGATG+TGG | + | chr5.1:23096011-23096030 | None:intergenic | 20.0% |
| !! | AATAAATTCTGCATATATAG+AGG | - | chr5.1:23094522-23094541 | MS.gene86239:CDS | 20.0% |
| !! | AATATCGAATAACAAATGTA+CGG | + | chr5.1:23096670-23096689 | None:intergenic | 20.0% |
| !! | ACAGTTTCTTTCATTATATT+TGG | + | chr5.1:23095272-23095291 | None:intergenic | 20.0% |
| !! | AGTTTATGCTTTATAAGATT+AGG | - | chr5.1:23096293-23096312 | MS.gene86239:intron | 20.0% |
| !! | ATAGAACCATTAAAACATAA+AGG | + | chr5.1:23091616-23091635 | None:intergenic | 20.0% |
| !! | ATATCTAGTTGTTGAAAATA+CGG | - | chr5.1:23096435-23096454 | MS.gene86239:intron | 20.0% |
| !! | ATTATAAGGATGAAAAATGT+AGG | - | chr5.1:23096044-23096063 | MS.gene86239:CDS | 20.0% |
| !! | TCTGAAAAAAAAAAAGTTGT+TGG | + | chr5.1:23095537-23095556 | None:intergenic | 20.0% |
| !! | TGAATATTTACAATAAACTG+TGG | - | chr5.1:23096157-23096176 | MS.gene86239:intron | 20.0% |
| !! | TTGTAATCTATGATTTCTTA+AGG | - | chr5.1:23094281-23094300 | MS.gene86239:intron | 20.0% |
| !!! | AAAGATTCTGAAATTTTTGT+AGG | - | chr5.1:23093263-23093282 | MS.gene86239:intron | 20.0% |
| !!! | AACTATTGTTCATAATTTTC+CGG | + | chr5.1:23093131-23093150 | None:intergenic | 20.0% |
| !!! | AAGATTCTGAAATTTTTGTA+GGG | - | chr5.1:23093264-23093283 | MS.gene86239:intron | 20.0% |
| !!! | AAGTTTTTTTAGTAGTTTCT+GGG | - | chr5.1:23093548-23093567 | MS.gene86239:intron | 20.0% |
| !!! | ACATCTTAAACAATTTTACA+TGG | + | chr5.1:23091416-23091435 | None:intergenic | 20.0% |
| !!! | ACATTTTTCATCCTTATAAT+TGG | + | chr5.1:23096044-23096063 | None:intergenic | 20.0% |
| !!! | ATATCATTGTCTATAGTTTT+CGG | + | chr5.1:23094445-23094464 | None:intergenic | 20.0% |
| !!! | CATTTTTCATCCTTATAATT+GGG | + | chr5.1:23096043-23096062 | None:intergenic | 20.0% |
| !!! | CTTTTAACAGAAATAAAACT+AGG | + | chr5.1:23095447-23095466 | None:intergenic | 20.0% |
| !!! | GTATATATTTTTAGGCAAAT+AGG | + | chr5.1:23091645-23091664 | None:intergenic | 20.0% |
| !!! | TAAGTTTAAAGAAGATTTTG+AGG | - | chr5.1:23091216-23091235 | MS.gene86239:intron | 20.0% |
| !!! | TAAGTTTTTTTAGTAGTTTC+TGG | - | chr5.1:23093547-23093566 | MS.gene86239:intron | 20.0% |
| !!! | TACAACTTGTTTAAATACTA+CGG | + | chr5.1:23096486-23096505 | None:intergenic | 20.0% |
| !!! | TTCTTTGGAAAAATATTTTC+AGG | + | chr5.1:23095003-23095022 | None:intergenic | 20.0% |
| !!! | TTTGTAATTCTTTTCATAGT+TGG | - | chr5.1:23091319-23091338 | MS.gene86239:intron | 20.0% |
| ! | AAAGCAGAAATCTTATATGT+AGG | + | chr5.1:23096266-23096285 | None:intergenic | 25.0% |
| ! | AAGTACCTTATAGAATCAAA+GGG | - | chr5.1:23094886-23094905 | MS.gene86239:intron | 25.0% |
| ! | ACAGTATATCAATAGAAACT+TGG | + | chr5.1:23096085-23096104 | None:intergenic | 25.0% |
| ! | AGACAAATATTACTTCTGTA+TGG | + | chr5.1:23094053-23094072 | None:intergenic | 25.0% |
| ! | AGACAATGATATTCTATTGA+TGG | - | chr5.1:23094453-23094472 | MS.gene86239:intron | 25.0% |
| ! | ATGTCTGATGATATATTCTT+TGG | + | chr5.1:23095018-23095037 | None:intergenic | 25.0% |
| ! | GGTTGAAACTTTATGAAAAT+TGG | - | chr5.1:23095203-23095222 | MS.gene86239:intron | 25.0% |
| ! | GTAATCACACTTGAAATATA+TGG | - | chr5.1:23093701-23093720 | MS.gene86239:CDS | 25.0% |
| ! | GTGCTTACAATAATGTAAAT+GGG | - | chr5.1:23095182-23095201 | MS.gene86239:intron | 25.0% |
| ! | GTTTGATACTTCATCTATAT+AGG | + | chr5.1:23095250-23095269 | None:intergenic | 25.0% |
| ! | TATGCTTTATAAGATTAGGA+GGG | - | chr5.1:23096297-23096316 | MS.gene86239:intron | 25.0% |
| ! | TCAGACGAAAAATTATTTCA+AGG | - | chr5.1:23095552-23095571 | MS.gene86239:intron | 25.0% |
| ! | TTAAAACATTTGTTCGTTCT+TGG | - | chr5.1:23092705-23092724 | MS.gene86239:intron | 25.0% |
| ! | TTAAACTTATCTTTCCAATC+AGG | + | chr5.1:23091205-23091224 | None:intergenic | 25.0% |
| ! | TTAAATACCAGATTGACATT+AGG | + | chr5.1:23093026-23093045 | None:intergenic | 25.0% |
| ! | TTACAATAAACTGTGGTAAA+TGG | - | chr5.1:23096164-23096183 | MS.gene86239:intron | 25.0% |
| ! | TTATGCTTTATAAGATTAGG+AGG | - | chr5.1:23096296-23096315 | MS.gene86239:intron | 25.0% |
| ! | TTGTACTAAATAACGTAACA+TGG | + | chr5.1:23095888-23095907 | None:intergenic | 25.0% |
| !! | AATTCATTGTTGTTAAATGG+CGG | + | chr5.1:23092135-23092154 | None:intergenic | 25.0% |
| !! | GTATCTATATCGATGATTTT+TGG | + | chr5.1:23092008-23092027 | None:intergenic | 25.0% |
| !! | GTATTTTCAACAACTAGATA+TGG | + | chr5.1:23096436-23096455 | None:intergenic | 25.0% |
| !! | GTCAATTCATTGTTGTTAAA+TGG | + | chr5.1:23092138-23092157 | None:intergenic | 25.0% |
| !! | TAGATGTTGGATATTGTTTT+AGG | - | chr5.1:23092191-23092210 | MS.gene86239:intron | 25.0% |
| !! | TCTTAAGGAAATCATCTTTT+TGG | - | chr5.1:23094296-23094315 | MS.gene86239:intron | 25.0% |
| !! | TTAAGGTAGTTTGCATTATT+TGG | - | chr5.1:23091915-23091934 | MS.gene86239:intron | 25.0% |
| !! | TTGAAGTATATATTTTTCCG+AGG | + | chr5.1:23093304-23093323 | None:intergenic | 25.0% |
| !!! | AAAGAGTTGATATGAATACA+AGG | + | chr5.1:23095793-23095812 | None:intergenic | 25.0% |
| !!! | AATCATATTAGTCTTCTTTG+TGG | - | chr5.1:23092304-23092323 | MS.gene86239:CDS | 25.0% |
| !!! | AGTTTTTAACTTACATACCT+CGG | + | chr5.1:23094754-23094773 | None:intergenic | 25.0% |
| !!! | GATCTTCCTTTATGTTTTAA+TGG | - | chr5.1:23091607-23091626 | MS.gene86239:intron | 25.0% |
| !!! | GATGGTGATTTTAATATTCT+TGG | - | chr5.1:23095322-23095341 | MS.gene86239:intron | 25.0% |
| !!! | GATTGTAATTTGTTGATGTT+TGG | - | chr5.1:23091750-23091769 | MS.gene86239:intron | 25.0% |
| !!! | TGTTATTCGATATTGATTCT+CGG | - | chr5.1:23096676-23096695 | MS.gene86239:CDS | 25.0% |
| !!! | TTGTGATTATTTGTTTTGTG+TGG | - | chr5.1:23096347-23096366 | MS.gene86239:intron | 25.0% |
| AAACAGAAGATTCCAACTTA+AGG | + | chr5.1:23092449-23092468 | None:intergenic | 30.0% | |
| AAGGTTCCTTTCAATTTACA+TGG | - | chr5.1:23094838-23094857 | MS.gene86239:intron | 30.0% | |
| AATAATAGCAAACCTCTTGT+TGG | + | chr5.1:23095154-23095173 | None:intergenic | 30.0% | |
| AATCGGGATTGTGAAATTAA+TGG | - | chr5.1:23094659-23094678 | MS.gene86239:intron | 30.0% | |
| AATGCTAAACTTGGAGATAT+CGG | - | chr5.1:23095119-23095138 | MS.gene86239:intron | 30.0% | |
| ACTGATACAAGTTCTATCTT+TGG | - | chr5.1:23094811-23094830 | MS.gene86239:intron | 30.0% | |
| AGACATAGCATGATTTACAA+GGG | + | chr5.1:23096219-23096238 | None:intergenic | 30.0% | |
| ATCGGGATTGTGAAATTAAT+GGG | - | chr5.1:23094660-23094679 | MS.gene86239:intron | 30.0% | |
| ATGAATCAATTTGACAAACC+CGG | - | chr5.1:23094559-23094578 | MS.gene86239:CDS | 30.0% | |
| ATTCCTTCACAAATTTCCTA+TGG | - | chr5.1:23092061-23092080 | MS.gene86239:intron | 30.0% | |
| ATTTAGAGATGAACATTCTC+CGG | - | chr5.1:23093109-23093128 | MS.gene86239:intron | 30.0% | |
| CAAGTACCTTATAGAATCAA+AGG | - | chr5.1:23094885-23094904 | MS.gene86239:intron | 30.0% | |
| CGATTATTTATTACCCGAAA+CGG | + | chr5.1:23092414-23092433 | None:intergenic | 30.0% | |
| CTAAAGAAACGTTCCAAATA+CGG | + | chr5.1:23091511-23091530 | None:intergenic | 30.0% | |
| GACGTTAACGAATATATTTG+AGG | + | chr5.1:23093609-23093628 | None:intergenic | 30.0% | |
| GATTTCATTTACAGTTGTCA+AGG | - | chr5.1:23093895-23093914 | MS.gene86239:CDS | 30.0% | |
| GGAAAATATCAGTAACATGA+GGG | + | chr5.1:23091255-23091274 | None:intergenic | 30.0% | |
| GGTGCTTACAATAATGTAAA+TGG | - | chr5.1:23095181-23095200 | MS.gene86239:intron | 30.0% | |
| TACAAAATGTTGTCAAGTAG+TGG | - | chr5.1:23092603-23092622 | MS.gene86239:intron | 30.0% | |
| TAGACATAGCATGATTTACA+AGG | + | chr5.1:23096220-23096239 | None:intergenic | 30.0% | |
| TAGTGAAATTGTGGATAGTT+TGG | - | chr5.1:23093986-23094005 | MS.gene86239:intron | 30.0% | |
| TGTTAGAGACTTTGAATGAA+TGG | + | chr5.1:23091129-23091148 | None:intergenic | 30.0% | |
| TTATACTTCGCCCAATTATA+AGG | - | chr5.1:23096030-23096049 | MS.gene86239:CDS | 30.0% | |
| TTGATCCAACATACATGATT+CGG | - | chr5.1:23095605-23095624 | MS.gene86239:intron | 30.0% | |
| TTGATTACAATGATCCTGAT+TGG | - | chr5.1:23091188-23091207 | MS.gene86239:intron | 30.0% | |
| ! | AAAATGTTTGACTTTCATCG+CGG | - | chr5.1:23091699-23091718 | MS.gene86239:intron | 30.0% |
| ! | AAGTTCTATCTTTGGTTCAA+AGG | - | chr5.1:23094819-23094838 | MS.gene86239:intron | 30.0% |
| ! | GATATACTGTTTTCACAGAA+AGG | - | chr5.1:23096095-23096114 | MS.gene86239:intron | 30.0% |
| ! | GTATATTGTTGATTGATTGC+AGG | - | chr5.1:23094132-23094151 | MS.gene86239:CDS | 30.0% |
| ! | TAACGTCATGTACGTTTTAT+TGG | - | chr5.1:23093622-23093641 | MS.gene86239:intron | 30.0% |
| ! | TGATTTTCCTAATGTCAATC+TGG | - | chr5.1:23093016-23093035 | MS.gene86239:CDS | 30.0% |
| ! | TTGGTTCATTGGTTGAAAAT+TGG | - | chr5.1:23092467-23092486 | MS.gene86239:intron | 30.0% |
| ! | TTTGAAGTAAATTCTGCATC+AGG | + | chr5.1:23095073-23095092 | None:intergenic | 30.0% |
| ! | TTTTAACAGCTGAAACAAAC+AGG | + | chr5.1:23093463-23093482 | None:intergenic | 30.0% |
| ! | TTTTTCACTTATCCTTGCAT+TGG | - | chr5.1:23092777-23092796 | MS.gene86239:CDS | 30.0% |
| ! | TTTTTCTGACAAAGAGTTGA+TGG | - | chr5.1:23093763-23093782 | MS.gene86239:intron | 30.0% |
| !! | AATACAACAGTTCTAAAACG+CGG | + | chr5.1:23095926-23095945 | None:intergenic | 30.0% |
| !! | AGAAAAAGCATTAAAGACAG+TGG | + | chr5.1:23096324-23096343 | None:intergenic | 30.0% |
| !! | AGTCGAATCAATTGTTGTTT+AGG | + | chr5.1:23093815-23093834 | None:intergenic | 30.0% |
| !! | ATTGCAAGCAACTTGTTTTT+CGG | - | chr5.1:23093068-23093087 | MS.gene86239:intron | 30.0% |
| !! | CGATCAAATTGTTTCTGATA+TGG | - | chr5.1:23093406-23093425 | MS.gene86239:CDS | 30.0% |
| !! | CTATTGATGGACAAAACTTT+TGG | - | chr5.1:23094466-23094485 | MS.gene86239:intron | 30.0% |
| !! | GAATCAATTGTTGTTTAGGA+GGG | + | chr5.1:23093811-23093830 | None:intergenic | 30.0% |
| !! | GGTTTGCTATTATTTGCTTA+TGG | - | chr5.1:23095160-23095179 | MS.gene86239:intron | 30.0% |
| !! | TTAAGTTGGAATCTTCTGTT+TGG | - | chr5.1:23092448-23092467 | MS.gene86239:intron | 30.0% |
| !!! | ATGTTGGATATTGTTTTAGG+TGG | - | chr5.1:23092194-23092213 | MS.gene86239:intron | 30.0% |
| !!! | CTACTTTTTGTCTCAAAATG+AGG | - | chr5.1:23091296-23091315 | MS.gene86239:intron | 30.0% |
| !!! | GTTTTTAACTTACATACCTC+GGG | + | chr5.1:23094753-23094772 | None:intergenic | 30.0% |
| !!! | TTAAAGAAGATTTTGAGGCA+CGG | - | chr5.1:23091221-23091240 | MS.gene86239:intron | 30.0% |
| AAGTAGTCAATCACAGATAG+CGG | + | chr5.1:23092682-23092701 | None:intergenic | 35.0% | |
| AGCTATAAACTTCGTGTTTG+AGG | - | chr5.1:23092349-23092368 | MS.gene86239:intron | 35.0% | |
| AGTAATATCGCATCCTCAAT+TGG | - | chr5.1:23096793-23096812 | MS.gene86239:CDS | 35.0% | |
| ATAAACTTCGTGTTTGAGGA+TGG | - | chr5.1:23092353-23092372 | MS.gene86239:intron | 35.0% | |
| ATAAAGACAGAAAGCTAGCT+AGG | + | chr5.1:23094780-23094799 | None:intergenic | 35.0% | |
| ATCAACATGCTCTTTGTGTT+GGG | - | chr5.1:23094163-23094182 | MS.gene86239:CDS | 35.0% | |
| ATCGAAATGAAGTGAAATGC+TGG | - | chr5.1:23092811-23092830 | MS.gene86239:intron | 35.0% | |
| ATGCTAAACTTGGAGATATC+GGG | - | chr5.1:23095120-23095139 | MS.gene86239:intron | 35.0% | |
| ATTATGATTCTGGTGAGGAA+TGG | - | chr5.1:23091858-23091877 | MS.gene86239:intron | 35.0% | |
| CATATGGCATTTCCACTTAT+GGG | - | chr5.1:23096409-23096428 | MS.gene86239:intron | 35.0% | |
| CTATAACTAGAGACTTCCAT+GGG | - | chr5.1:23091834-23091853 | MS.gene86239:intron | 35.0% | |
| CTATGTTTCCTTTCGAATCA+AGG | - | chr5.1:23096624-23096643 | MS.gene86239:CDS | 35.0% | |
| CTCAAATTCTTGCCTTAAGT+TGG | - | chr5.1:23092434-23092453 | MS.gene86239:intron | 35.0% | |
| CTGATCCCTTTGATTCTATA+AGG | + | chr5.1:23094894-23094913 | None:intergenic | 35.0% | |
| CTTCAAACCAGAAGAAGTAA+AGG | - | chr5.1:23093318-23093337 | MS.gene86239:intron | 35.0% | |
| GAACACGTGAAATATGATCA+CGG | + | chr5.1:23096587-23096606 | None:intergenic | 35.0% | |
| GCTGTTGTTAATGTAGATGT+TGG | - | chr5.1:23092178-23092197 | MS.gene86239:intron | 35.0% | |
| GGGAAAATATCAGTAACATG+AGG | + | chr5.1:23091256-23091275 | None:intergenic | 35.0% | |
| GGGAATTGTATTCTCATTCA+AGG | + | chr5.1:23096376-23096395 | None:intergenic | 35.0% | |
| GTTCAAAACATTCATCTCTC+AGG | - | chr5.1:23093924-23093943 | MS.gene86239:CDS | 35.0% | |
| TAGACGCTATTTAACAACTC+TGG | + | chr5.1:23095831-23095850 | None:intergenic | 35.0% | |
| TATGGTGTAACTGAGATTGT+TGG | - | chr5.1:23093719-23093738 | MS.gene86239:CDS | 35.0% | |
| TCTTAACGATGTCATTAGAC+AGG | - | chr5.1:23093375-23093394 | MS.gene86239:CDS | 35.0% | |
| TGAAATTGTGGATAGTTTGG+AGG | - | chr5.1:23093989-23094008 | MS.gene86239:intron | 35.0% | |
| TGAGGTCCATGTAAATTGAA+AGG | + | chr5.1:23094847-23094866 | None:intergenic | 35.0% | |
| TGAGGTCTGCTAATAACTAA+GGG | + | chr5.1:23093591-23093610 | None:intergenic | 35.0% | |
| TGATCCAACATACATGATTC+GGG | - | chr5.1:23095606-23095625 | MS.gene86239:intron | 35.0% | |
| TTACAAGACATTCCAATGCA+AGG | + | chr5.1:23092792-23092811 | None:intergenic | 35.0% | |
| TTCAATTTACATGGACCTCA+TGG | - | chr5.1:23094847-23094866 | MS.gene86239:intron | 35.0% | |
| TTCCATGGGAATTATGATTC+TGG | - | chr5.1:23091848-23091867 | MS.gene86239:intron | 35.0% | |
| TTGAGGATGCGATATTACTT+CGG | + | chr5.1:23096792-23096811 | None:intergenic | 35.0% | |
| TTGAGGTCTGCTAATAACTA+AGG | + | chr5.1:23093592-23093611 | None:intergenic | 35.0% | |
| TTGATTCAATGTTGTCGATG+CGG | - | chr5.1:23091968-23091987 | MS.gene86239:intron | 35.0% | |
| TTGATTGATTGCAGGAAAGA+GGG | - | chr5.1:23094140-23094159 | MS.gene86239:CDS | 35.0% | |
| TTGTACTAAATAGCGTATCG+TGG | + | chr5.1:23092588-23092607 | None:intergenic | 35.0% | |
| ! | AACAGAAACCTTGATTCGAA+AGG | + | chr5.1:23096635-23096654 | None:intergenic | 35.0% |
| ! | ATGCACATGATGATGATGAA+GGG | + | chr5.1:23091056-23091075 | None:intergenic | 35.0% |
| ! | ATTGGTTCTCAATTCTCCTA+TGG | - | chr5.1:23095756-23095775 | MS.gene86239:intron | 35.0% |
| ! | CGTATTTGGAACGTTTCTTT+AGG | - | chr5.1:23091509-23091528 | MS.gene86239:intron | 35.0% |
| ! | GAATCTTCTGTTTGGTTCAT+TGG | - | chr5.1:23092456-23092475 | MS.gene86239:intron | 35.0% |
| ! | GAGATTGTTGGTATTCCTTT+TGG | - | chr5.1:23093731-23093750 | MS.gene86239:intron | 35.0% |
| ! | GGAATTTTATGCACTGTACT+TGG | - | chr5.1:23095652-23095671 | MS.gene86239:intron | 35.0% |
| ! | GTTTTCAGTGCTGTAAAAGA+CGG | - | chr5.1:23094395-23094414 | MS.gene86239:intron | 35.0% |
| ! | TAATGACAGAGTGCTTCTTA+AGG | - | chr5.1:23091898-23091917 | MS.gene86239:intron | 35.0% |
| ! | TACAACAAACATTTTGCAGC+CGG | - | chr5.1:23096536-23096555 | MS.gene86239:intron | 35.0% |
| !! | AAGCAACTTGTTTTTCGGAA+AGG | - | chr5.1:23093073-23093092 | MS.gene86239:intron | 35.0% |
| !! | AGCAACTTGTTTTTCGGAAA+GGG | - | chr5.1:23093074-23093093 | MS.gene86239:intron | 35.0% |
| !! | CAAAGAGTTGATGGAAATAC+CGG | - | chr5.1:23093772-23093791 | MS.gene86239:intron | 35.0% |
| !! | CGAATCAATTGTTGTTTAGG+AGG | + | chr5.1:23093812-23093831 | None:intergenic | 35.0% |
| !!! | CTTGTTTTTGTGTGATGACA+GGG | - | chr5.1:23091808-23091827 | MS.gene86239:intron | 35.0% |
| !!! | GTTTGCTTTTTTCTCTCACT+TGG | - | chr5.1:23091560-23091579 | MS.gene86239:intron | 35.0% |
| !!! | TCTTGTTTTTGTGTGATGAC+AGG | - | chr5.1:23091807-23091826 | MS.gene86239:intron | 35.0% |
| AACTGTGGTAAATGGAACAC+TGG | - | chr5.1:23096172-23096191 | MS.gene86239:intron | 40.0% | |
| AATATCGCATCCTCAATTGG+TGG | - | chr5.1:23096796-23096815 | MS.gene86239:CDS | 40.0% | |
| ACCTGGAGTTAGTGAAATTG+TGG | - | chr5.1:23093977-23093996 | MS.gene86239:intron | 40.0% | |
| ACTAGATATGGACCCATAAG+TGG | + | chr5.1:23096424-23096443 | None:intergenic | 40.0% | |
| ACTTACATACCTCGGGAATT+AGG | + | chr5.1:23094746-23094765 | None:intergenic | 40.0% | |
| AGATGACTCAAAACTCCATG+AGG | + | chr5.1:23094865-23094884 | None:intergenic | 40.0% | |
| ATAGTGCATATCACGGAATC+GGG | - | chr5.1:23094643-23094662 | MS.gene86239:intron | 40.0% | |
| ATCAATTATGCCTACGTCTC+CGG | + | chr5.1:23096558-23096577 | None:intergenic | 40.0% | |
| ATGAAGTGAAATGCTGGACT+TGG | - | chr5.1:23092817-23092836 | MS.gene86239:intron | 40.0% | |
| ATGGAACACTGGAGTACAAT+AGG | - | chr5.1:23096183-23096202 | MS.gene86239:intron | 40.0% | |
| CAAAACATTCATCTCTCAGG+TGG | - | chr5.1:23093927-23093946 | MS.gene86239:CDS | 40.0% | |
| CAAGGCTGATAAACTTCCAT+AGG | + | chr5.1:23095775-23095794 | None:intergenic | 40.0% | |
| CACCAGAATCATAATTCCCA+TGG | + | chr5.1:23091853-23091872 | None:intergenic | 40.0% | |
| CATAGTGCATATCACGGAAT+CGG | - | chr5.1:23094642-23094661 | MS.gene86239:intron | 40.0% | |
| CATTGATCCTGGCTGTAATT+GGG | - | chr5.1:23092973-23092992 | MS.gene86239:CDS | 40.0% | |
| CCATGGAAGTCTCTAGTTAT+AGG | + | chr5.1:23091836-23091855 | None:intergenic | 40.0% | |
| CCTATAACTAGAGACTTCCA+TGG | - | chr5.1:23091833-23091852 | MS.gene86239:intron | 40.0% | |
| CCTTCACAAATTTCCTATGG+CGG | - | chr5.1:23092064-23092083 | MS.gene86239:intron | 40.0% | |
| CGGATCAAAGTGTGTGTTAT+TGG | - | chr5.1:23094415-23094434 | MS.gene86239:intron | 40.0% | |
| CTAATGACATCGTTAAGACC+AGG | + | chr5.1:23093373-23093392 | None:intergenic | 40.0% | |
| CTTCATCATCATCATGTGCA+TGG | - | chr5.1:23091055-23091074 | MS.gene86239:CDS | 40.0% | |
| GACATTACAGCACTATTGTG+AGG | - | chr5.1:23092631-23092650 | MS.gene86239:intron | 40.0% | |
| GATCAACATGCTCTTTGTGT+TGG | - | chr5.1:23094162-23094181 | MS.gene86239:CDS | 40.0% | |
| GCATATGGCATTTCCACTTA+TGG | - | chr5.1:23096408-23096427 | MS.gene86239:intron | 40.0% | |
| GGAGGGAAATATGAGATTAC+CGG | + | chr5.1:23093794-23093813 | None:intergenic | 40.0% | |
| GGATATAGTGGCATTACAGT+AGG | - | chr5.1:23096731-23096750 | MS.gene86239:CDS | 40.0% | |
| GTTGATTGATTGCAGGAAAG+AGG | - | chr5.1:23094139-23094158 | MS.gene86239:CDS | 40.0% | |
| TAGGCACATAGTGCATATCA+CGG | - | chr5.1:23094636-23094655 | MS.gene86239:intron | 40.0% | |
| TCAATTGTGGATCGCAGAAT+AGG | + | chr5.1:23095973-23095992 | None:intergenic | 40.0% | |
| TCCACAATTTCACTAACTCC+AGG | + | chr5.1:23093981-23094000 | None:intergenic | 40.0% | |
| TCGATATAGATACGCCATTG+CGG | - | chr5.1:23092015-23092034 | MS.gene86239:intron | 40.0% | |
| TGAATGAATGGAAGAGACGA+TGG | + | chr5.1:23091117-23091136 | None:intergenic | 40.0% | |
| TGCGATATTACTTCGGTGAT+TGG | + | chr5.1:23096785-23096804 | None:intergenic | 40.0% | |
| TGCTAAACTTGGAGATATCG+GGG | - | chr5.1:23095121-23095140 | MS.gene86239:intron | 40.0% | |
| TGGAACACTGGAGTACAATA+GGG | - | chr5.1:23096184-23096203 | MS.gene86239:intron | 40.0% | |
| TGGGAATTATGATTCTGGTG+AGG | - | chr5.1:23091853-23091872 | MS.gene86239:intron | 40.0% | |
| TTGCTATGAATCCACTGCTA+CGG | + | chr5.1:23094686-23094705 | None:intergenic | 40.0% | |
| ! | ATGACTAGCGTAAAGCGTTA+TGG | - | chr5.1:23093238-23093257 | MS.gene86239:CDS | 40.0% |
| ! | CATGCACATGATGATGATGA+AGG | + | chr5.1:23091057-23091076 | None:intergenic | 40.0% |
| ! | CCATATGCATTTTGTGCTTG+GGG | + | chr5.1:23096396-23096415 | None:intergenic | 40.0% |
| ! | GCCATATGCATTTTGTGCTT+GGG | + | chr5.1:23096397-23096416 | None:intergenic | 40.0% |
| ! | TGCCATATGCATTTTGTGCT+TGG | + | chr5.1:23096398-23096417 | None:intergenic | 40.0% |
| ! | TTGTTGTTAAATGGCGGTCA+TGG | + | chr5.1:23092129-23092148 | None:intergenic | 40.0% |
| !! | AACGCATAGAAGAAGCATCA+GGG | + | chr5.1:23091276-23091295 | None:intergenic | 40.0% |
| !! | CACAGATAGCGGAAAATAGA+AGG | + | chr5.1:23092671-23092690 | None:intergenic | 40.0% |
| !! | TCGATATTGATTCTCGGCTT+TGG | - | chr5.1:23096682-23096701 | MS.gene86239:CDS | 40.0% |
| !!! | CTTTTTTCTCTCACTTGGTC+AGG | - | chr5.1:23091565-23091584 | MS.gene86239:intron | 40.0% |
| !!! | GATGGTTGGTTTTGGAGTAA+CGG | + | chr5.1:23091099-23091118 | None:intergenic | 40.0% |
| AACATGCTCTTTGTGTTGGG+TGG | - | chr5.1:23094166-23094185 | MS.gene86239:CDS | 45.0% | |
| ACACACGCAATTTGATTCCG+TGG | - | chr5.1:23091469-23091488 | MS.gene86239:intron | 45.0% | |
| ACTAATGATACCGATGCCTC+AGG | - | chr5.1:23095095-23095114 | MS.gene86239:intron | 45.0% | |
| AGCAGCAGTGTTGTCAATTG+TGG | + | chr5.1:23095986-23096005 | None:intergenic | 45.0% | |
| AGCCTATTAGGAGTTTCACG+CGG | - | chr5.1:23093951-23093970 | MS.gene86239:CDS | 45.0% | |
| ATGCAATCTTCCTTAGCCAG+TGG | - | chr5.1:23094705-23094724 | MS.gene86239:intron | 45.0% | |
| ATGGCTGCCTTTACTTCTTC+TGG | + | chr5.1:23093328-23093347 | None:intergenic | 45.0% | |
| CAATTTGATTCCGTGGTGTG+TGG | - | chr5.1:23091476-23091495 | MS.gene86239:intron | 45.0% | |
| CACTGTACTTGGACAGAATG+CGG | - | chr5.1:23095663-23095682 | MS.gene86239:intron | 45.0% | |
| CAGCAGATGTAGGTGATGAA+TGG | + | chr5.1:23092943-23092962 | None:intergenic | 45.0% | |
| CAGTCCTCCACAAGTAACAA+TGG | + | chr5.1:23093347-23093366 | None:intergenic | 45.0% | |
| CATCGATGCTTAACTTCGAC+CGG | - | chr5.1:23096839-23096858 | MS.gene86239:CDS | 45.0% | |
| CATTCATCACCTACATCTGC+TGG | - | chr5.1:23092941-23092960 | MS.gene86239:intron | 45.0% | |
| CCCCAAGCACAAAATGCATA+TGG | - | chr5.1:23096393-23096412 | MS.gene86239:intron | 45.0% | |
| CCGCCATAGGAAATTTGTGA+AGG | + | chr5.1:23092067-23092086 | None:intergenic | 45.0% | |
| CGCTATAACGTAGCGAAGTT+TGG | - | chr5.1:23092545-23092564 | MS.gene86239:intron | 45.0% | |
| CGGGGTTTATATCCAACAAG+AGG | - | chr5.1:23095139-23095158 | MS.gene86239:intron | 45.0% | |
| CTAATGATACCGATGCCTCA+GGG | - | chr5.1:23095096-23095115 | MS.gene86239:intron | 45.0% | |
| CTCTTTGTGTTGGGTGGAAA+TGG | - | chr5.1:23094172-23094191 | MS.gene86239:CDS | 45.0% | |
| CTGTTTGGATCCACCAATTG+AGG | + | chr5.1:23096809-23096828 | None:intergenic | 45.0% | |
| GAAAAACCGCGATAGCCAAA+AGG | + | chr5.1:23093749-23093768 | None:intergenic | 45.0% | |
| GATTCTGGTGAGGAATGGAA+TGG | - | chr5.1:23091863-23091882 | MS.gene86239:intron | 45.0% | |
| GCATACATCAATCTGTCCAC+TGG | + | chr5.1:23094724-23094743 | None:intergenic | 45.0% | |
| GCGTATCGTGGAAAGAATAG+TGG | + | chr5.1:23092576-23092595 | None:intergenic | 45.0% | |
| GCTGTAATTGGGTGGAACAA+TGG | - | chr5.1:23092984-23093003 | MS.gene86239:CDS | 45.0% | |
| GCTTTGGTATTGCAGGTTCA+TGG | - | chr5.1:23096698-23096717 | MS.gene86239:CDS | 45.0% | |
| GTGACAGTTCATAGCCGTTT+CGG | - | chr5.1:23092397-23092416 | MS.gene86239:intron | 45.0% | |
| GTGGTTGTTTGCTCCGTATT+TGG | - | chr5.1:23091495-23091514 | MS.gene86239:intron | 45.0% | |
| GTTGTCGATGCGGAATATTG+TGG | - | chr5.1:23091978-23091997 | MS.gene86239:intron | 45.0% | |
| TCCAAGTTTAGCATTCCCTG+AGG | + | chr5.1:23095114-23095133 | None:intergenic | 45.0% | |
| TCGATGCGGAATATTGTGGA+AGG | - | chr5.1:23091982-23092001 | MS.gene86239:intron | 45.0% | |
| TCTTTGTGCTTCTTCAACCG+CGG | + | chr5.1:23094500-23094519 | None:intergenic | 45.0% | |
| TGAATGGAAGAGACGATGGT+TGG | + | chr5.1:23091113-23091132 | None:intergenic | 45.0% | |
| TGACAGTTCATAGCCGTTTC+GGG | - | chr5.1:23092398-23092417 | MS.gene86239:intron | 45.0% | |
| TGATGTATGCCTAATTCCCG+AGG | - | chr5.1:23094734-23094753 | MS.gene86239:intron | 45.0% | |
| TGCAAATGCAATTCACGACG+AGG | - | chr5.1:23094207-23094226 | MS.gene86239:intron | 45.0% | |
| TGGATCCAAACAGTCGAATG+TGG | - | chr5.1:23096816-23096835 | MS.gene86239:CDS | 45.0% | |
| TGTCACTAAAACACTTCGCG+AGG | + | chr5.1:23092383-23092402 | None:intergenic | 45.0% | |
| TGTCGAGCAAATGCTTCAGA+TGG | - | chr5.1:23095631-23095650 | MS.gene86239:intron | 45.0% | |
| TTTAGCATTCCCTGAGGCAT+CGG | + | chr5.1:23095108-23095127 | None:intergenic | 45.0% | |
| ! | AAATTAATGGGCCGTAGCAG+TGG | - | chr5.1:23094672-23094691 | MS.gene86239:intron | 45.0% |
| ! | AAGGCAGCCATTGTTACTTG+TGG | - | chr5.1:23093337-23093356 | MS.gene86239:intron | 45.0% |
| ! | ATCAATCTGTCCACTGGCTA+AGG | + | chr5.1:23094718-23094737 | None:intergenic | 45.0% |
| ! | ATGATGATGATGAAGGGTGG+TGG | + | chr5.1:23091050-23091069 | None:intergenic | 45.0% |
| ! | ATTCTCGGCTTTGGTATTGC+AGG | - | chr5.1:23096691-23096710 | MS.gene86239:CDS | 45.0% |
| ! | CACATGATGATGATGAAGGG+TGG | + | chr5.1:23091053-23091072 | None:intergenic | 45.0% |
| ! | GCATTGATCCTGGCTGTAAT+TGG | - | chr5.1:23092972-23092991 | MS.gene86239:CDS | 45.0% |
| ! | GGTGCATTTGCTGGATATAG+TGG | - | chr5.1:23096719-23096738 | MS.gene86239:CDS | 45.0% |
| ! | GTGTCTTTTCAGAGCTGAAG+AGG | - | chr5.1:23091155-23091174 | MS.gene86239:CDS | 45.0% |
| ! | TTTTGTAGGGTTCATCGAGC+TGG | - | chr5.1:23093277-23093296 | MS.gene86239:intron | 45.0% |
| !! | GAACGCATAGAAGAAGCATC+AGG | + | chr5.1:23091277-23091296 | None:intergenic | 45.0% |
| !! | GGTATTCCTTTTGGCTATCG+CGG | - | chr5.1:23093740-23093759 | MS.gene86239:intron | 45.0% |
| !! | TCAAATGAAGTCGGGTTGAC+CGG | + | chr5.1:23096861-23096880 | None:intergenic | 45.0% |
| !!! | AACTTTTGGCTTTGACACCG+CGG | - | chr5.1:23094480-23094499 | MS.gene86239:intron | 45.0% |
| !!! | AGAATGGCATGGCGGTTTTT+TGG | + | chr5.1:23092094-23092113 | None:intergenic | 45.0% |
| !!! | GAAGAGACGATGGTTGGTTT+TGG | + | chr5.1:23091107-23091126 | None:intergenic | 45.0% |
| CACGCCCGAATCATGTATGT+TGG | + | chr5.1:23095613-23095632 | None:intergenic | 50.0% | |
| CAGGTTCATGGTGCATTTGC+TGG | - | chr5.1:23096710-23096729 | MS.gene86239:CDS | 50.0% | |
| CGATGCCACATTCGACTGTT+TGG | + | chr5.1:23096824-23096843 | None:intergenic | 50.0% | |
| CTATTAGGAGTTTCACGCGG+AGG | - | chr5.1:23093954-23093973 | MS.gene86239:CDS | 50.0% | |
| CTCCGCGTGAAACTCCTAAT+AGG | + | chr5.1:23093956-23093975 | None:intergenic | 50.0% | |
| GAGCAAACAACCACACACCA+CGG | + | chr5.1:23091489-23091508 | None:intergenic | 50.0% | |
| GCCTCAGGGAATGCTAAACT+TGG | - | chr5.1:23095110-23095129 | MS.gene86239:intron | 50.0% | |
| GGTGGAAATGGTACACATGC+TGG | - | chr5.1:23094184-23094203 | MS.gene86239:intron | 50.0% | |
| TGATCCTGGCTGTAATTGGG+TGG | - | chr5.1:23092976-23092995 | MS.gene86239:CDS | 50.0% | |
| TGTTCCACCCAATTACAGCC+AGG | + | chr5.1:23092983-23093002 | None:intergenic | 50.0% | |
| TTGTGAAGGAATTCCCGCCA+TGG | + | chr5.1:23092053-23092072 | None:intergenic | 50.0% | |
| ! | AGCTGTAGTTTGTGTGGCAG+AGG | - | chr5.1:23094912-23094931 | MS.gene86239:CDS | 50.0% |
| ! | GCAGCCATTGTTACTTGTGG+AGG | - | chr5.1:23093340-23093359 | MS.gene86239:intron | 50.0% |
| ! | GCTGTAGTTTGTGTGGCAGA+GGG | - | chr5.1:23094913-23094932 | MS.gene86239:CDS | 50.0% |
| ! | GGGATCAGCTGTAGTTTGTG+TGG | - | chr5.1:23094906-23094925 | MS.gene86239:CDS | 50.0% |
| !!! | GTTTTTTGGACAGCCGCCAT+AGG | + | chr5.1:23092080-23092099 | None:intergenic | 50.0% |
| ACTTGTGGAGGACTGTGTCC+TGG | - | chr5.1:23093352-23093371 | MS.gene86239:intron | 55.0% | |
| AGATACGCCATTGCGGCATG+TGG | - | chr5.1:23092022-23092041 | MS.gene86239:intron | 55.0% | |
| CTCTCAGGTGGCAGCCTATT+AGG | - | chr5.1:23093939-23093958 | MS.gene86239:CDS | 55.0% | |
| TGAAGGAATTCCCGCCATGG+TGG | + | chr5.1:23092050-23092069 | None:intergenic | 55.0% | |
| ! | CATTTTGCAGCCGGAGACGT+AGG | - | chr5.1:23096545-23096564 | MS.gene86239:intron | 55.0% |
| ACCGCCATGCCATTCTGCCA+TGG | - | chr5.1:23092098-23092117 | MS.gene86239:intron | 60.0% | |
| CACTGAGCGCCAGCAGATGT+AGG | + | chr5.1:23092953-23092972 | None:intergenic | 60.0% | |
| GCCATGCCATTCTGCCATGG+CGG | - | chr5.1:23092101-23092120 | MS.gene86239:intron | 60.0% | |
| GCCATGGCAGAATGGCATGG+CGG | + | chr5.1:23092102-23092121 | None:intergenic | 60.0% | |
| GGGTTCATCGAGCTGGACCT+CGG | - | chr5.1:23093284-23093303 | MS.gene86239:intron | 60.0% | |
| GTTTGTGTGGCAGAGGGAGC+AGG | - | chr5.1:23094919-23094938 | MS.gene86239:CDS | 60.0% | |
| ! | AAGGGTGGTGGCGAGGTTAG+GGG | + | chr5.1:23091038-23091057 | None:intergenic | 60.0% |
| ! | GAAGGGTGGTGGCGAGGTTA+GGG | + | chr5.1:23091039-23091058 | None:intergenic | 60.0% |
| ! | GATGATGAAGGGTGGTGGCG+AGG | + | chr5.1:23091045-23091064 | None:intergenic | 60.0% |
| ! | GGCGCTCAGTGCATTGATCC+TGG | - | chr5.1:23092962-23092981 | MS.gene86239:CDS | 60.0% |
| ! | TGAAGGGTGGTGGCGAGGTT+AGG | + | chr5.1:23091040-23091059 | None:intergenic | 60.0% |
| ATGGCGCCGCCATGGCAGAA+TGG | + | chr5.1:23092110-23092129 | None:intergenic | 65.0% | |
| GCCGCCATGGCAGAATGGCA+TGG | + | chr5.1:23092105-23092124 | None:intergenic | 65.0% | |
| GGAGTTTCACGCGGAGGACC+TGG | - | chr5.1:23093960-23093979 | MS.gene86239:CDS | 65.0% | |
| TGTGGCAGAGGGAGCAGGAC+AGG | - | chr5.1:23094924-23094943 | MS.gene86239:CDS | 65.0% | |
| GCATGTGGCGCCACCATGGC+GGG | - | chr5.1:23092037-23092056 | MS.gene86239:intron | 70.0% | |
| GGCATGTGGCGCCACCATGG+CGG | - | chr5.1:23092036-23092055 | MS.gene86239:intron | 70.0% | |
| GGTGGCGCCACATGCCGCAA+TGG | + | chr5.1:23092032-23092051 | None:intergenic | 70.0% | |
| TGCGGCATGTGGCGCCACCA+TGG | - | chr5.1:23092033-23092052 | MS.gene86239:intron | 70.0% | |
| TGGCGGTCATGGCGCCGCCA+TGG | + | chr5.1:23092118-23092137 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 23091016 | 23096880 | 23091016 | ID=MS.gene86239 |
| chr5.1 | mRNA | 23091016 | 23096880 | 23091016 | ID=MS.gene86239.t1;Parent=MS.gene86239 |
| chr5.1 | exon | 23096579 | 23096880 | 23096579 | ID=MS.gene86239.t1.exon1;Parent=MS.gene86239.t1 |
| chr5.1 | CDS | 23096579 | 23096880 | 23096579 | ID=cds.MS.gene86239.t1;Parent=MS.gene86239.t1 |
| chr5.1 | exon | 23095977 | 23096067 | 23095977 | ID=MS.gene86239.t1.exon2;Parent=MS.gene86239.t1 |
| chr5.1 | CDS | 23095977 | 23096067 | 23095977 | ID=cds.MS.gene86239.t1;Parent=MS.gene86239.t1 |
| chr5.1 | exon | 23094891 | 23094964 | 23094891 | ID=MS.gene86239.t1.exon3;Parent=MS.gene86239.t1 |
| chr5.1 | CDS | 23094891 | 23094964 | 23094891 | ID=cds.MS.gene86239.t1;Parent=MS.gene86239.t1 |
| chr5.1 | exon | 23094500 | 23094611 | 23094500 | ID=MS.gene86239.t1.exon4;Parent=MS.gene86239.t1 |
| chr5.1 | CDS | 23094500 | 23094611 | 23094500 | ID=cds.MS.gene86239.t1;Parent=MS.gene86239.t1 |
| chr5.1 | exon | 23094103 | 23094198 | 23094103 | ID=MS.gene86239.t1.exon5;Parent=MS.gene86239.t1 |
| chr5.1 | CDS | 23094103 | 23094198 | 23094103 | ID=cds.MS.gene86239.t1;Parent=MS.gene86239.t1 |
| chr5.1 | exon | 23093886 | 23093987 | 23093886 | ID=MS.gene86239.t1.exon6;Parent=MS.gene86239.t1 |
| chr5.1 | CDS | 23093886 | 23093987 | 23093886 | ID=cds.MS.gene86239.t1;Parent=MS.gene86239.t1 |
| chr5.1 | exon | 23093668 | 23093742 | 23093668 | ID=MS.gene86239.t1.exon7;Parent=MS.gene86239.t1 |
| chr5.1 | CDS | 23093668 | 23093742 | 23093668 | ID=cds.MS.gene86239.t1;Parent=MS.gene86239.t1 |
| chr5.1 | exon | 23093353 | 23093493 | 23093353 | ID=MS.gene86239.t1.exon8;Parent=MS.gene86239.t1 |
| chr5.1 | CDS | 23093353 | 23093493 | 23093353 | ID=cds.MS.gene86239.t1;Parent=MS.gene86239.t1 |
| chr5.1 | exon | 23093141 | 23093257 | 23093141 | ID=MS.gene86239.t1.exon9;Parent=MS.gene86239.t1 |
| chr5.1 | CDS | 23093141 | 23093257 | 23093141 | ID=cds.MS.gene86239.t1;Parent=MS.gene86239.t1 |
| chr5.1 | exon | 23092951 | 23093055 | 23092951 | ID=MS.gene86239.t1.exon10;Parent=MS.gene86239.t1 |
| chr5.1 | CDS | 23092951 | 23093055 | 23092951 | ID=cds.MS.gene86239.t1;Parent=MS.gene86239.t1 |
| chr5.1 | exon | 23092736 | 23092816 | 23092736 | ID=MS.gene86239.t1.exon11;Parent=MS.gene86239.t1 |
| chr5.1 | CDS | 23092736 | 23092816 | 23092736 | ID=cds.MS.gene86239.t1;Parent=MS.gene86239.t1 |
| chr5.1 | exon | 23092212 | 23092340 | 23092212 | ID=MS.gene86239.t1.exon12;Parent=MS.gene86239.t1 |
| chr5.1 | CDS | 23092212 | 23092340 | 23092212 | ID=cds.MS.gene86239.t1;Parent=MS.gene86239.t1 |
| chr5.1 | exon | 23091016 | 23091183 | 23091016 | ID=MS.gene86239.t1.exon13;Parent=MS.gene86239.t1 |
| chr5.1 | CDS | 23091016 | 23091183 | 23091016 | ID=cds.MS.gene86239.t1;Parent=MS.gene86239.t1 |
| Gene Sequence |
| Protein sequence |
