Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86635.t1 | AES79079.2 | 95.9 | 343 | 14 | 0 | 1 | 343 | 8 | 350 | 2.70E-172 | 614.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86635.t1 | Q9FME2 | 38.6 | 352 | 185 | 6 | 1 | 343 | 1 | 330 | 2.6e-51 | 204.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86635.t1 | A0A072TZ72 | 95.9 | 343 | 14 | 0 | 1 | 343 | 1 | 343 | 1.9e-172 | 614.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene033053 | MS.gene86635 | PPI |
| MS.gene044455 | MS.gene86635 | PPI |
| MS.gene063501 | MS.gene86635 | PPI |
| MS.gene044456 | MS.gene86635 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86635.t1 | MTR_7g057520 | 95.640 | 344 | 15 | 0 | 1 | 344 | 1 | 344 | 0.0 | 640 |
| MS.gene86635.t1 | MTR_7g055610 | 95.640 | 344 | 15 | 0 | 1 | 344 | 8 | 351 | 0.0 | 640 |
| MS.gene86635.t1 | MTR_7g013840 | 40.960 | 354 | 172 | 9 | 10 | 343 | 12 | 348 | 2.38e-70 | 228 |
| MS.gene86635.t1 | MTR_7g013840 | 40.960 | 354 | 172 | 9 | 10 | 343 | 12 | 348 | 2.80e-70 | 228 |
| MS.gene86635.t1 | MTR_4g109640 | 39.944 | 358 | 163 | 9 | 10 | 343 | 12 | 341 | 1.56e-68 | 220 |
| MS.gene86635.t1 | MTR_4g109640 | 39.944 | 358 | 163 | 9 | 10 | 343 | 12 | 341 | 2.18e-68 | 219 |
| MS.gene86635.t1 | MTR_4g109640 | 39.944 | 358 | 163 | 9 | 10 | 343 | 12 | 341 | 2.33e-67 | 219 |
| MS.gene86635.t1 | MTR_4g083150 | 37.097 | 372 | 188 | 8 | 1 | 345 | 1 | 353 | 2.57e-65 | 214 |
| MS.gene86635.t1 | MTR_7g098440 | 31.635 | 373 | 206 | 11 | 1 | 343 | 1 | 354 | 2.73e-37 | 140 |
| MS.gene86635.t1 | MTR_1g045800 | 28.883 | 367 | 220 | 11 | 8 | 349 | 7 | 357 | 3.60e-32 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86635.t1 | AT3G25150 | 46.133 | 362 | 150 | 9 | 7 | 343 | 8 | 349 | 2.84e-92 | 285 |
| MS.gene86635.t1 | AT3G25150 | 46.133 | 362 | 150 | 9 | 7 | 343 | 107 | 448 | 1.20e-91 | 286 |
| MS.gene86635.t1 | AT5G60980 | 38.764 | 356 | 179 | 5 | 1 | 343 | 1 | 330 | 1.47e-59 | 199 |
| MS.gene86635.t1 | AT5G60980 | 38.764 | 356 | 179 | 5 | 1 | 343 | 1 | 330 | 1.47e-59 | 199 |
| MS.gene86635.t1 | AT5G60980 | 38.764 | 356 | 179 | 5 | 1 | 343 | 1 | 330 | 1.54e-59 | 199 |
| MS.gene86635.t1 | AT5G60980 | 38.764 | 356 | 179 | 5 | 1 | 343 | 1 | 330 | 1.54e-59 | 199 |
| MS.gene86635.t1 | AT5G48650 | 37.322 | 351 | 186 | 9 | 12 | 339 | 13 | 352 | 7.44e-56 | 189 |
| MS.gene86635.t1 | AT1G13730 | 32.203 | 354 | 189 | 9 | 1 | 343 | 1 | 314 | 3.16e-42 | 152 |
| MS.gene86635.t1 | AT1G13730 | 32.203 | 354 | 189 | 9 | 1 | 343 | 1 | 314 | 3.16e-42 | 152 |
| MS.gene86635.t1 | AT2G03640 | 33.815 | 346 | 186 | 11 | 3 | 341 | 2 | 311 | 4.54e-42 | 152 |
| MS.gene86635.t1 | AT2G03640 | 34.006 | 347 | 183 | 12 | 3 | 341 | 2 | 310 | 7.05e-41 | 149 |
| MS.gene86635.t1 | AT2G03640 | 34.006 | 347 | 183 | 12 | 3 | 341 | 2 | 310 | 7.05e-41 | 149 |
| MS.gene86635.t1 | AT2G03640 | 34.006 | 347 | 183 | 12 | 3 | 341 | 2 | 310 | 7.05e-41 | 149 |
| MS.gene86635.t1 | AT2G03640 | 34.006 | 347 | 183 | 12 | 3 | 341 | 2 | 310 | 1.24e-40 | 149 |
| MS.gene86635.t1 | AT1G69250 | 33.526 | 346 | 198 | 12 | 1 | 343 | 1 | 317 | 8.98e-40 | 146 |
| MS.gene86635.t1 | AT1G69250 | 33.237 | 346 | 199 | 12 | 1 | 343 | 1 | 317 | 1.12e-39 | 145 |
| MS.gene86635.t1 | AT3G07250 | 30.994 | 342 | 186 | 14 | 10 | 339 | 3 | 306 | 3.32e-28 | 116 |
| MS.gene86635.t1 | AT5G43960 | 29.609 | 358 | 218 | 11 | 10 | 343 | 6 | 353 | 4.78e-28 | 114 |
| MS.gene86635.t1 | AT5G43960 | 29.885 | 261 | 153 | 8 | 106 | 343 | 41 | 294 | 1.22e-19 | 89.7 |
| MS.gene86635.t1 | AT3G55540 | 33.600 | 125 | 77 | 4 | 15 | 133 | 32 | 156 | 1.91e-13 | 70.9 |
| MS.gene86635.t1 | AT3G24463 | 35.922 | 103 | 62 | 4 | 13 | 111 | 9 | 111 | 9.17e-12 | 62.4 |
Find 92 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACTAGAACCATTTGTTTC+TGG | 0.167296 | 6.1:+49756318 | None:intergenic |
| TCTTCGGCACTTCTTCAATT+TGG | 0.175338 | 6.1:+49756696 | None:intergenic |
| TCCGTAATGACAGCTGCTTC+TGG | 0.220668 | 6.1:-49756402 | MS.gene86635:CDS |
| CTTCGGCACTTCTTCAATTT+GGG | 0.237490 | 6.1:+49756697 | None:intergenic |
| GATAATATGTTCAAGAAGTT+TGG | 0.272836 | 6.1:-49756061 | MS.gene86635:CDS |
| GGAGTCATTGTCTTGGTCAC+TGG | 0.284606 | 6.1:-49757213 | MS.gene86635:CDS |
| TCTGATGAAGACATTGGTTT+TGG | 0.317873 | 6.1:-49754814 | MS.gene86635:CDS |
| TCTTCATCAGACTCTTCTTC+AGG | 0.318738 | 6.1:+49754826 | None:intergenic |
| GAGTCATTGTCTTGGTCACT+GGG | 0.328550 | 6.1:-49757212 | MS.gene86635:CDS |
| TGGACACCGCCACTCTTGAT+AGG | 0.341350 | 6.1:+49756037 | None:intergenic |
| GTGGATGCACAAGAGTCTTT+TGG | 0.375158 | 6.1:-49757240 | MS.gene86635:CDS |
| GCTGCTTTCTGTGAATCATT+AGG | 0.376741 | 6.1:+49756770 | None:intergenic |
| ATACCTTTGCTGTCCTAACT+TGG | 0.400943 | 6.1:+49756017 | None:intergenic |
| TTCACAGAAGGTAGCTGAAT+TGG | 0.401296 | 6.1:-49756723 | MS.gene86635:CDS |
| CCGTAATGACAGCTGCTTCT+GGG | 0.406551 | 6.1:-49756401 | MS.gene86635:CDS |
| TAAAACCTATGCACATGCTC+AGG | 0.418125 | 6.1:+49757921 | None:intergenic |
| AGGGCATGTGTAGCATTTCC+AGG | 0.424842 | 6.1:+49756088 | None:intergenic |
| AGCATCATGTTACCATTCTC+AGG | 0.433770 | 6.1:+49757033 | None:intergenic |
| TTCCTTGCTCCTCAAGAGAA+AGG | 0.437287 | 6.1:-49757141 | MS.gene86635:CDS |
| TGACTGCTGAGGATGGTGAT+AGG | 0.438498 | 6.1:-49756880 | MS.gene86635:CDS |
| CCCAGAAGCAGCTGTCATTA+CGG | 0.438517 | 6.1:+49756401 | None:intergenic |
| TGCCAAGGAGGCGGCAAAGA+AGG | 0.439243 | 6.1:-49754854 | MS.gene86635:intron |
| AGTGTTGGATCCTCCTGTGC+TGG | 0.440145 | 6.1:-49756930 | MS.gene86635:CDS |
| AGAGTGGCGGTGTCCAAGTT+AGG | 0.440879 | 6.1:-49756030 | MS.gene86635:CDS |
| CCGATGATACCATCTGGTTC+AGG | 0.443109 | 6.1:+49757873 | None:intergenic |
| AGAAGTCTACAATCCAGAAA+AGG | 0.444292 | 6.1:-49756849 | MS.gene86635:CDS |
| TTGGTCACTGGGTTTATGAT+AGG | 0.445866 | 6.1:-49757201 | MS.gene86635:CDS |
| GAAGTCTACAATCCAGAAAA+GGG | 0.452472 | 6.1:-49756848 | MS.gene86635:CDS |
| TCAGCAAGAACCTCAGGAAC+AGG | 0.454683 | 6.1:+49756797 | None:intergenic |
| TACCAAGATGTCAGTAAGCT+TGG | 0.454912 | 6.1:-49757900 | MS.gene86635:CDS |
| GGCTATTCAATTTATTTGAA+AGG | 0.459524 | 6.1:-49756115 | MS.gene86635:CDS |
| GCTATTCAATTTATTTGAAA+GGG | 0.459913 | 6.1:-49756114 | MS.gene86635:CDS |
| GGAATTTCAGCAAGAACCTC+AGG | 0.465142 | 6.1:+49756791 | None:intergenic |
| ATGGAGGCATATGATTTCTT+CGG | 0.469501 | 6.1:+49756680 | None:intergenic |
| ATTTATTTGAAAGGGCTGCC+TGG | 0.471179 | 6.1:-49756106 | MS.gene86635:CDS |
| ACTCTTGTGCATCCACAGAT+AGG | 0.475539 | 6.1:+49757247 | None:intergenic |
| GACCAAGCTTACTGACATCT+TGG | 0.477816 | 6.1:+49757898 | None:intergenic |
| GGAGATCCAATGTCATGATC+AGG | 0.484436 | 6.1:+49757063 | None:intergenic |
| TGTTGATGAAAATGAAATCA+AGG | 0.484974 | 6.1:-49757088 | MS.gene86635:CDS |
| TGACAAGAAGATACTGTCAA+TGG | 0.484996 | 6.1:-49757295 | MS.gene86635:CDS |
| ACAAAGTAGCCTTTCTCTTG+AGG | 0.490719 | 6.1:+49757132 | None:intergenic |
| GCTACCTTCTGTGAATCATC+AGG | 0.503178 | 6.1:+49756731 | None:intergenic |
| TCTCCTGCCTCTCCTGAGAA+TGG | 0.504733 | 6.1:-49757045 | MS.gene86635:intron |
| GGAACTTGTGTCTCCAGCAC+AGG | 0.507872 | 6.1:+49756917 | None:intergenic |
| ATATATATACATACAACATC+AGG | 0.509407 | 6.1:+49758247 | None:intergenic |
| GCAGTCACAGATATTTGCTC+TGG | 0.513035 | 6.1:+49756896 | None:intergenic |
| TTACCATTCTCAGGAGAGGC+AGG | 0.514038 | 6.1:+49757042 | None:intergenic |
| TTCAGAGAATCAAGTTCCTC+CGG | 0.526348 | 6.1:-49758272 | MS.gene86635:CDS |
| ACCATTTGTTTCTGGCACAC+TGG | 0.527488 | 6.1:+49756326 | None:intergenic |
| AATGATTCACAGAAAGCAGC+TGG | 0.531023 | 6.1:-49756767 | MS.gene86635:CDS |
| GACAAGAAGATACTGTCAAT+GGG | 0.533669 | 6.1:-49757294 | MS.gene86635:CDS |
| GCAAGTGTCTGTTGAAGAAG+AGG | 0.533771 | 6.1:-49756825 | MS.gene86635:CDS |
| TCCAGTGTGCCAGAAACAAA+TGG | 0.535626 | 6.1:-49756327 | MS.gene86635:CDS |
| GTAGCTTAAGGTAATGAAAG+AGG | 0.550794 | 6.1:-49756439 | MS.gene86635:intron |
| TCTAGTATAAGTACTAATGA+AGG | 0.557933 | 6.1:-49756303 | MS.gene86635:CDS |
| AAGGAACCTGATCATGACAT+TGG | 0.558690 | 6.1:-49757069 | MS.gene86635:CDS |
| GACTGCTGAGGATGGTGATA+GGG | 0.564877 | 6.1:-49756879 | MS.gene86635:CDS |
| AGTATAAGTACTAATGAAGG+TGG | 0.568379 | 6.1:-49756300 | MS.gene86635:CDS |
| TTTGTTTCTGGCACACTGGA+TGG | 0.571504 | 6.1:+49756330 | None:intergenic |
| GAAGAGTCTGATGAAGACAT+TGG | 0.571608 | 6.1:-49754820 | MS.gene86635:CDS |
| CCTGAACCAGATGGTATCAT+CGG | 0.573611 | 6.1:-49757873 | MS.gene86635:CDS |
| AGCCTTTCTCTTGAGGAGCA+AGG | 0.578397 | 6.1:+49757139 | None:intergenic |
| GGACACCGCCACTCTTGATA+GGG | 0.579408 | 6.1:+49756038 | None:intergenic |
| AAAACCTATGCACATGCTCA+GGG | 0.586213 | 6.1:+49757922 | None:intergenic |
| CACTGGGTTTATGATAGGAA+AGG | 0.597377 | 6.1:-49757196 | MS.gene86635:CDS |
| GTGATGCCGATGATACCATC+TGG | 0.601385 | 6.1:+49757867 | None:intergenic |
| ACTTGTGTCTCCAGCACAGG+AGG | 0.604167 | 6.1:+49756920 | None:intergenic |
| ATACATACAACATCAGGTGC+CGG | 0.606983 | 6.1:+49758253 | None:intergenic |
| TCTTGAACATATTATCAACA+AGG | 0.608367 | 6.1:+49756068 | None:intergenic |
| GCAGCTGTCATTACGGAGGA+CGG | 0.611765 | 6.1:+49756408 | None:intergenic |
| GCAAATATCTGTGACTGCTG+AGG | 0.616027 | 6.1:-49756891 | MS.gene86635:CDS |
| CTTGAACATATTATCAACAA+GGG | 0.626265 | 6.1:+49756069 | None:intergenic |
| ATATCTGTGACTGCTGAGGA+TGG | 0.626749 | 6.1:-49756887 | MS.gene86635:CDS |
| GAGAGAGCTCACGGCCATTG+TGG | 0.628746 | 6.1:+49757842 | None:intergenic |
| TGTTCCTGATGATTCACAGA+AGG | 0.634860 | 6.1:-49756735 | MS.gene86635:CDS |
| AAGTCTACAATCCAGAAAAG+GGG | 0.635113 | 6.1:-49756847 | MS.gene86635:CDS |
| TAGTGCGGAGATCCTATCTG+TGG | 0.636226 | 6.1:-49757259 | MS.gene86635:CDS |
| AAAGCCCTGAGCATGTGCAT+AGG | 0.637108 | 6.1:-49757926 | MS.gene86635:CDS |
| GGAAACAATCAAGAAACTGA+AGG | 0.637783 | 6.1:-49756279 | MS.gene86635:intron |
| AGAGGAAGCTCCTGTTCCTG+AGG | 0.641981 | 6.1:-49756807 | MS.gene86635:CDS |
| TCTGGCACACTGGATGGTGA+AGG | 0.641996 | 6.1:+49756336 | None:intergenic |
| CATGTTACCATTCTCAGGAG+AGG | 0.648742 | 6.1:+49757038 | None:intergenic |
| GGGTTATAGTGAACTTAGTG+CGG | 0.649351 | 6.1:-49757274 | MS.gene86635:CDS |
| CTTGGTCGTCCTGAACCAGA+TGG | 0.650811 | 6.1:-49757882 | MS.gene86635:CDS |
| AAGTTTGGCCCTATCAAGAG+TGG | 0.651104 | 6.1:-49756046 | MS.gene86635:CDS |
| AGAACAGACACTTACAATGG+AGG | 0.661527 | 6.1:+49756664 | None:intergenic |
| CATCGGCATCACAACCACAA+TGG | 0.675733 | 6.1:-49757856 | MS.gene86635:CDS |
| TGTCCAAGTTAGGACAGCAA+AGG | 0.677658 | 6.1:-49756020 | MS.gene86635:intron |
| ATAGTAGTACTGTTCAACAA+AGG | 0.683995 | 6.1:+49757959 | None:intergenic |
| TTTGGCCCTATCAAGAGTGG+CGG | 0.685024 | 6.1:-49756043 | MS.gene86635:CDS |
| CATACAACATCAGGTGCCGG+AGG | 0.709159 | 6.1:+49758256 | None:intergenic |
| AGAAGCAGCTGTCATTACGG+AGG | 0.717591 | 6.1:+49756404 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAACAAAAAAACA+GGG | + | chr6.1:49757098-49757117 | None:intergenic | 10.0% |
| !! | TTTAAAAAAAACAAAAAAAC+AGG | + | chr6.1:49757099-49757118 | None:intergenic | 10.0% |
| !!! | TAGTTTTCAATTTTAAAAAA+AGG | - | chr6.1:49757868-49757887 | MS.gene86635:CDS | 10.0% |
| !! | AACTTAGATTCTAATAAATA+TGG | - | chr6.1:49755649-49755668 | MS.gene86635:intron | 15.0% |
| !! | ACAATGGAAATAAATTTAAA+AGG | + | chr6.1:49755604-49755623 | None:intergenic | 15.0% |
| !! | TACATATACATATACATATA+TGG | + | chr6.1:49756831-49756850 | None:intergenic | 15.0% |
| !!! | CTCATTATTAATTTGTTTTT+AGG | - | chr6.1:49757446-49757465 | MS.gene86635:intron | 15.0% |
| !! | AAAAATATTCTTACTTGGAA+TGG | + | chr6.1:49757407-49757426 | None:intergenic | 20.0% |
| !! | ACAGAAAAAATATTCTTACT+TGG | + | chr6.1:49757412-49757431 | None:intergenic | 20.0% |
| !! | ATAACAAGTAACATTTACAA+TGG | + | chr6.1:49756485-49756504 | None:intergenic | 20.0% |
| !! | ATATATATACATACAACATC+AGG | + | chr6.1:49754831-49754850 | None:intergenic | 20.0% |
| !! | ATTGAAATAAATTCGTGAAA+AGG | + | chr6.1:49757576-49757595 | None:intergenic | 20.0% |
| !! | GCTATTCAATTTATTTGAAA+GGG | - | chr6.1:49756961-49756980 | MS.gene86635:intron | 20.0% |
| !! | TAGAATCTAAGTTAACAAAT+GGG | + | chr6.1:49755642-49755661 | None:intergenic | 20.0% |
| !! | TATTTATTGATGTGTTCAAT+TGG | - | chr6.1:49756918-49756937 | MS.gene86635:CDS | 20.0% |
| !! | TTAGAATCTAAGTTAACAAA+TGG | + | chr6.1:49755643-49755662 | None:intergenic | 20.0% |
| !!! | ATTTTTAATGTGATTGGTTT+AGG | - | chr6.1:49755084-49755103 | MS.gene86635:intron | 20.0% |
| ! | AAGATATTGTACAAACCAAT+TGG | + | chr6.1:49755415-49755434 | None:intergenic | 25.0% |
| ! | AATATCACTATGATAAACAC+AGG | + | chr6.1:49756902-49756921 | None:intergenic | 25.0% |
| ! | ATATCACTATGATAAACACA+GGG | + | chr6.1:49756901-49756920 | None:intergenic | 25.0% |
| ! | CATAGCCACTAATATATATT+CGG | + | chr6.1:49757764-49757783 | None:intergenic | 25.0% |
| ! | CTTGAACATATTATCAACAA+GGG | + | chr6.1:49757009-49757028 | None:intergenic | 25.0% |
| ! | GATAATATGTTCAAGAAGTT+TGG | - | chr6.1:49757014-49757033 | MS.gene86635:intron | 25.0% |
| ! | GGCTATTCAATTTATTTGAA+AGG | - | chr6.1:49756960-49756979 | MS.gene86635:intron | 25.0% |
| ! | TAACATTTACAATGGAAACT+CGG | + | chr6.1:49756477-49756496 | None:intergenic | 25.0% |
| ! | TACAAAAGAAAAAGAGTCTT+AGG | - | chr6.1:49758040-49758059 | MS.gene86635:intron | 25.0% |
| ! | TCAATATTCATATCTCCAAT+TGG | - | chr6.1:49755397-49755416 | MS.gene86635:intron | 25.0% |
| ! | TCCTCTAATAATTTCAAACT+AGG | + | chr6.1:49757703-49757722 | None:intergenic | 25.0% |
| ! | TCTAGTATAAGTACTAATGA+AGG | - | chr6.1:49756772-49756791 | MS.gene86635:CDS | 25.0% |
| ! | TCTTGAACATATTATCAACA+AGG | + | chr6.1:49757010-49757029 | None:intergenic | 25.0% |
| ! | TGTTGAGATAAATAGAAGAA+AGG | - | chr6.1:49757318-49757337 | MS.gene86635:intron | 25.0% |
| ! | TTCTTCTATTTATCTCAACA+TGG | + | chr6.1:49757318-49757337 | None:intergenic | 25.0% |
| ! | TTGTACAAAATAGTGTTTAG+CGG | - | chr6.1:49754969-49754988 | MS.gene86635:intron | 25.0% |
| !! | TGTTGATGAAAATGAAATCA+AGG | - | chr6.1:49755987-49756006 | MS.gene86635:intron | 25.0% |
| !!! | AAATGCAATTTTGAGAGATT+TGG | - | chr6.1:49757524-49757543 | MS.gene86635:intron | 25.0% |
| !!! | CAAACGTTTTTAGTCTAATA+TGG | - | chr6.1:49757901-49757920 | MS.gene86635:CDS | 25.0% |
| !!! | TGACTGATTTTTAATGTGAT+TGG | - | chr6.1:49755078-49755097 | MS.gene86635:intron | 25.0% |
| !!! | TTGTTGATTTTGTTAAATGC+AGG | - | chr6.1:49758132-49758151 | MS.gene86635:intron | 25.0% |
| AAAATGCACACAAGAAACAA+GGG | + | chr6.1:49755362-49755381 | None:intergenic | 30.0% | |
| AAATGAAGAATACTGTCATG+AGG | - | chr6.1:49757981-49758000 | MS.gene86635:intron | 30.0% | |
| AACAAGCAACTTTAGTTAAC+AGG | + | chr6.1:49756109-49756128 | None:intergenic | 30.0% | |
| AAGAAATTACACCAATGCAT+AGG | + | chr6.1:49755496-49755515 | None:intergenic | 30.0% | |
| AATCGCTATTTGACAACATT+GGG | - | chr6.1:49755017-49755036 | MS.gene86635:intron | 30.0% | |
| AGTATAAGTACTAATGAAGG+TGG | - | chr6.1:49756775-49756794 | MS.gene86635:CDS | 30.0% | |
| ATACTAGAACCATTTGTTTC+TGG | + | chr6.1:49756760-49756779 | None:intergenic | 30.0% | |
| ATAGTAGTACTGTTCAACAA+AGG | + | chr6.1:49755119-49755138 | None:intergenic | 30.0% | |
| ATATATATTAGTGGCTATGC+AGG | - | chr6.1:49757765-49757784 | MS.gene86635:intron | 30.0% | |
| CTAAATCCAATCAAGAGTTA+CGG | + | chr6.1:49757813-49757832 | None:intergenic | 30.0% | |
| GCATTTAGATGATCATACAA+TGG | + | chr6.1:49755620-49755639 | None:intergenic | 30.0% | |
| TAAAATGCACACAAGAAACA+AGG | + | chr6.1:49755363-49755382 | None:intergenic | 30.0% | |
| TAATCGCTATTTGACAACAT+TGG | - | chr6.1:49755016-49755035 | MS.gene86635:intron | 30.0% | |
| TATAGAACAGACACTTACAA+TGG | + | chr6.1:49756417-49756436 | None:intergenic | 30.0% | |
| TATTCTTACTTGGAATGGAT+TGG | + | chr6.1:49757402-49757421 | None:intergenic | 30.0% | |
| TATTCTTGACTCTATTACAC+TGG | - | chr6.1:49756504-49756523 | MS.gene86635:intron | 30.0% | |
| TTTCAAATAACGCCTATTTG+CGG | + | chr6.1:49754944-49754963 | None:intergenic | 30.0% | |
| ! | ATTCTTACTTGGAATGGATT+GGG | + | chr6.1:49757401-49757420 | None:intergenic | 30.0% |
| ! | CTTTATAGCTGTCTATGTTT+TGG | - | chr6.1:49755311-49755330 | MS.gene86635:intron | 30.0% |
| ! | GCCTAGTTTGAAATTATTAG+AGG | - | chr6.1:49757699-49757718 | MS.gene86635:intron | 30.0% |
| !! | AGTTTGTTTAAGTTTTGCGA+TGG | - | chr6.1:49754903-49754922 | MS.gene86635:intron | 30.0% |
| !! | TTAATGTGATTGGTTTAGGT+TGG | - | chr6.1:49755088-49755107 | MS.gene86635:intron | 30.0% |
| !!! | TAACCATGTTTTAATACCCT+TGG | - | chr6.1:49755449-49755468 | MS.gene86635:intron | 30.0% |
| !!! | TTAAGGCGTGGTTTTATTAA+GGG | - | chr6.1:49756064-49756083 | MS.gene86635:CDS | 30.0% |
| !!! | TTGTTATTTTCCTCTGTAAC+TGG | - | chr6.1:49756603-49756622 | MS.gene86635:intron | 30.0% |
| AAATGCACACAAGAAACAAG+GGG | + | chr6.1:49755361-49755380 | None:intergenic | 35.0% | |
| AAGTCTACAATCCAGAAAAG+GGG | - | chr6.1:49756228-49756247 | MS.gene86635:intron | 35.0% | |
| AGAAGTCTACAATCCAGAAA+AGG | - | chr6.1:49756226-49756245 | MS.gene86635:intron | 35.0% | |
| AGAATATGAGTGAGTAGTGA+TGG | + | chr6.1:49757271-49757290 | None:intergenic | 35.0% | |
| AGTGAAACTACTAGGAAAAG+AGG | + | chr6.1:49757177-49757196 | None:intergenic | 35.0% | |
| ATATCCAAAGCAATGTTCAG+AGG | + | chr6.1:49755531-49755550 | None:intergenic | 35.0% | |
| CTAGCATAGAAGTAGAGATA+AGG | + | chr6.1:49757851-49757870 | None:intergenic | 35.0% | |
| GAAGTCTACAATCCAGAAAA+GGG | - | chr6.1:49756227-49756246 | MS.gene86635:intron | 35.0% | |
| GAATGGTAACATGATGCTTA+AGG | - | chr6.1:49756047-49756066 | MS.gene86635:CDS | 35.0% | |
| GACAAGAAGATACTGTCAAT+GGG | - | chr6.1:49755781-49755800 | MS.gene86635:intron | 35.0% | |
| GGAAACAATCAAGAAACTGA+AGG | - | chr6.1:49756796-49756815 | MS.gene86635:CDS | 35.0% | |
| GTAGCTTAAGGTAATGAAAG+AGG | - | chr6.1:49756636-49756655 | MS.gene86635:intron | 35.0% | |
| GTGCACCGAATATATATTAG+TGG | - | chr6.1:49757756-49757775 | MS.gene86635:intron | 35.0% | |
| TAACTCCCTTCCTAAAAGAA+TGG | + | chr6.1:49757221-49757240 | None:intergenic | 35.0% | |
| TAAGAACCGTAACTCTTGAT+TGG | - | chr6.1:49757804-49757823 | MS.gene86635:intron | 35.0% | |
| TCATACAATGTTGTGAATCG+CGG | - | chr6.1:49754865-49754884 | MS.gene86635:intron | 35.0% | |
| TGACAAGAAGATACTGTCAA+TGG | - | chr6.1:49755780-49755799 | MS.gene86635:intron | 35.0% | |
| ! | AGAGATTTGGAGTCAAACAT+TGG | - | chr6.1:49757537-49757556 | MS.gene86635:intron | 35.0% |
| ! | ATGGAGGCATATGATTTCTT+CGG | + | chr6.1:49756398-49756417 | None:intergenic | 35.0% |
| ! | GAGATTTGGAGTCAAACATT+GGG | - | chr6.1:49757538-49757557 | MS.gene86635:intron | 35.0% |
| ! | GCTGCTAGCTAATAACTTTT+TGG | - | chr6.1:49757124-49757143 | MS.gene86635:CDS | 35.0% |
| ! | TATGGATTGAGTGTTAGAAG+TGG | - | chr6.1:49755667-49755686 | MS.gene86635:intron | 35.0% |
| ! | TTATTTTCCTCTGTAACTGG+TGG | - | chr6.1:49756606-49756625 | MS.gene86635:intron | 35.0% |
| !! | AAAGGCATCAGCAAGTAATT+AGG | + | chr6.1:49755586-49755605 | None:intergenic | 35.0% |
| !! | AAGCATAGTGCCATTCTTTT+AGG | - | chr6.1:49757208-49757227 | MS.gene86635:CDS | 35.0% |
| !! | ATAGTGCCATTCTTTTAGGA+AGG | - | chr6.1:49757212-49757231 | MS.gene86635:CDS | 35.0% |
| !! | TAGTGCCATTCTTTTAGGAA+GGG | - | chr6.1:49757213-49757232 | MS.gene86635:CDS | 35.0% |
| !!! | CTTAAGGCGTGGTTTTATTA+AGG | - | chr6.1:49756063-49756082 | MS.gene86635:CDS | 35.0% |
| !!! | GACATTGGTTTTGGTTTGTT+CGG | - | chr6.1:49758270-49758289 | MS.gene86635:CDS | 35.0% |
| !!! | TCTGATGAAGACATTGGTTT+TGG | - | chr6.1:49758261-49758280 | MS.gene86635:CDS | 35.0% |
| AAAACCTATGCACATGCTCA+GGG | + | chr6.1:49755156-49755175 | None:intergenic | 40.0% | |
| AAGGAACCTGATCATGACAT+TGG | - | chr6.1:49756006-49756025 | MS.gene86635:intron | 40.0% | |
| AATGATTCACAGAAAGCAGC+TGG | - | chr6.1:49756308-49756327 | MS.gene86635:CDS | 40.0% | |
| ACAAAGTAGCCTTTCTCTTG+AGG | + | chr6.1:49755946-49755965 | None:intergenic | 40.0% | |
| ACACCAATGCATAGGCATAT+GGG | + | chr6.1:49755488-49755507 | None:intergenic | 40.0% | |
| ACGAGAGATCGTAAAGTAAG+AGG | - | chr6.1:49757347-49757366 | MS.gene86635:intron | 40.0% | |
| AGAAAGAGCAAGAAAGGAAG+AGG | + | chr6.1:49756445-49756464 | None:intergenic | 40.0% | |
| AGAACAGACACTTACAATGG+AGG | + | chr6.1:49756414-49756433 | None:intergenic | 40.0% | |
| AGAACAGCCACAAGTTTACT+TGG | + | chr6.1:49758160-49758179 | None:intergenic | 40.0% | |
| AGAATGGCACTATGCTTATG+AGG | + | chr6.1:49757205-49757224 | None:intergenic | 40.0% | |
| AGCATCATGTTACCATTCTC+AGG | + | chr6.1:49756045-49756064 | None:intergenic | 40.0% | |
| ATACATACAACATCAGGTGC+CGG | + | chr6.1:49754825-49754844 | None:intergenic | 40.0% | |
| ATTTATTTGAAAGGGCTGCC+TGG | - | chr6.1:49756969-49756988 | MS.gene86635:intron | 40.0% | |
| CAAACCTCTGAACATTGCTT+TGG | - | chr6.1:49755524-49755543 | MS.gene86635:intron | 40.0% | |
| CAATCAAGAAACTGAAGGTC+TGG | - | chr6.1:49756801-49756820 | MS.gene86635:CDS | 40.0% | |
| CACTGGGTTTATGATAGGAA+AGG | - | chr6.1:49755879-49755898 | MS.gene86635:intron | 40.0% | |
| CATACAATGTTGTGAATCGC+GGG | - | chr6.1:49754866-49754885 | MS.gene86635:intron | 40.0% | |
| CATCAGCAAGTAATTAGGTG+GGG | + | chr6.1:49755581-49755600 | None:intergenic | 40.0% | |
| CCTATTTCATTTCACCAAGC+AGG | - | chr6.1:49755753-49755772 | MS.gene86635:intron | 40.0% | |
| CTTCGGCACTTCTTCAATTT+GGG | + | chr6.1:49756381-49756400 | None:intergenic | 40.0% | |
| CTTCTTGTCAATTTCCTGCT+TGG | + | chr6.1:49755770-49755789 | None:intergenic | 40.0% | |
| GAAAGAGCAAGAAAGGAAGA+GGG | + | chr6.1:49756444-49756463 | None:intergenic | 40.0% | |
| GAACAGCCACAAGTTTACTT+GGG | + | chr6.1:49758159-49758178 | None:intergenic | 40.0% | |
| GAAGAGTCTGATGAAGACAT+TGG | - | chr6.1:49758255-49758274 | MS.gene86635:intron | 40.0% | |
| GAGTCTAGAAAGAGCAAGAA+AGG | + | chr6.1:49756451-49756470 | None:intergenic | 40.0% | |
| GCATCAGCAAGTAATTAGGT+GGG | + | chr6.1:49755582-49755601 | None:intergenic | 40.0% | |
| GGGTTATAGTGAACTTAGTG+CGG | - | chr6.1:49755801-49755820 | MS.gene86635:intron | 40.0% | |
| TAAAACCTATGCACATGCTC+AGG | + | chr6.1:49755157-49755176 | None:intergenic | 40.0% | |
| TACACCAATGCATAGGCATA+TGG | + | chr6.1:49755489-49755508 | None:intergenic | 40.0% | |
| TACCAAGATGTCAGTAAGCT+TGG | - | chr6.1:49755175-49755194 | MS.gene86635:intron | 40.0% | |
| TCTTCATCAGACTCTTCTTC+AGG | + | chr6.1:49758252-49758271 | None:intergenic | 40.0% | |
| TCTTCGGCACTTCTTCAATT+TGG | + | chr6.1:49756382-49756401 | None:intergenic | 40.0% | |
| TGTTCCTGATGATTCACAGA+AGG | - | chr6.1:49756340-49756359 | MS.gene86635:CDS | 40.0% | |
| TTCACAGAAGGTAGCTGAAT+TGG | - | chr6.1:49756352-49756371 | MS.gene86635:CDS | 40.0% | |
| TTCAGAGAATCAAGTTCCTC+CGG | - | chr6.1:49754803-49754822 | MS.gene86635:CDS | 40.0% | |
| TTGGTCACTGGGTTTATGAT+AGG | - | chr6.1:49755874-49755893 | MS.gene86635:intron | 40.0% | |
| ! | ATACCTTTGCTGTCCTAACT+TGG | + | chr6.1:49757061-49757080 | None:intergenic | 40.0% |
| ! | CCTGCTTGGTGAAATGAAAT+AGG | + | chr6.1:49755756-49755775 | None:intergenic | 40.0% |
| ! | GCTGCTTTCTGTGAATCATT+AGG | + | chr6.1:49756308-49756327 | None:intergenic | 40.0% |
| !! | GACAGCAAAGGTATTTCACT+TGG | - | chr6.1:49757067-49757086 | MS.gene86635:CDS | 40.0% |
| !! | GAGCCAAGGGTATTAAAACA+TGG | + | chr6.1:49755455-49755474 | None:intergenic | 40.0% |
| !! | TACTTGGAATGGATTGGGTT+GGG | + | chr6.1:49757396-49757415 | None:intergenic | 40.0% |
| !! | TCTTTTAGGAAGGGAGTTAG+TGG | - | chr6.1:49757222-49757241 | MS.gene86635:CDS | 40.0% |
| !! | TTACTTGGAATGGATTGGGT+TGG | + | chr6.1:49757397-49757416 | None:intergenic | 40.0% |
| AACAGATCCACCAGTTACAG+AGG | + | chr6.1:49756616-49756635 | None:intergenic | 45.0% | |
| AAGTTTGGCCCTATCAAGAG+TGG | - | chr6.1:49757029-49757048 | MS.gene86635:intron | 45.0% | |
| AATAGCCCTCAGCTGTCAAA+AGG | + | chr6.1:49756947-49756966 | None:intergenic | 45.0% | |
| ACACCCATATGCCTATGCAT+TGG | - | chr6.1:49755482-49755501 | MS.gene86635:intron | 45.0% | |
| ACTCTTGTGCATCCACAGAT+AGG | + | chr6.1:49755831-49755850 | None:intergenic | 45.0% | |
| AGGTGGGAAGTGAAACTACT+AGG | + | chr6.1:49757185-49757204 | None:intergenic | 45.0% | |
| AGTGCTATAGTGCCGCAAAT+AGG | - | chr6.1:49754929-49754948 | MS.gene86635:intron | 45.0% | |
| ATATCTGTGACTGCTGAGGA+TGG | - | chr6.1:49756188-49756207 | MS.gene86635:intron | 45.0% | |
| ATGGCACTATGCTTATGAGG+TGG | + | chr6.1:49757202-49757221 | None:intergenic | 45.0% | |
| CATGTTACCATTCTCAGGAG+AGG | + | chr6.1:49756040-49756059 | None:intergenic | 45.0% | |
| CCTGAACCAGATGGTATCAT+CGG | - | chr6.1:49755202-49755221 | MS.gene86635:intron | 45.0% | |
| GACCAAGCTTACTGACATCT+TGG | + | chr6.1:49755180-49755199 | None:intergenic | 45.0% | |
| GAGGATCCAACACTGAAAGA+GGG | + | chr6.1:49756139-49756158 | None:intergenic | 45.0% | |
| GAGTCATTGTCTTGGTCACT+GGG | - | chr6.1:49755863-49755882 | MS.gene86635:intron | 45.0% | |
| GCAAATATCTGTGACTGCTG+AGG | - | chr6.1:49756184-49756203 | MS.gene86635:intron | 45.0% | |
| GCAAGTGTCTGTTGAAGAAG+AGG | - | chr6.1:49756250-49756269 | MS.gene86635:intron | 45.0% | |
| GCAGTCACAGATATTTGCTC+TGG | + | chr6.1:49756182-49756201 | None:intergenic | 45.0% | |
| GCTACCTTCTGTGAATCATC+AGG | + | chr6.1:49756347-49756366 | None:intergenic | 45.0% | |
| GGAATTTCAGCAAGAACCTC+AGG | + | chr6.1:49756287-49756306 | None:intergenic | 45.0% | |
| GGAGATCCAATGTCATGATC+AGG | + | chr6.1:49756015-49756034 | None:intergenic | 45.0% | |
| GGCATCAGCAAGTAATTAGG+TGG | + | chr6.1:49755583-49755602 | None:intergenic | 45.0% | |
| GGTGCAGTTTCTCTCTAAGT+GGG | + | chr6.1:49757297-49757316 | None:intergenic | 45.0% | |
| GGTGGATCTGTTGTAGCTTA+AGG | - | chr6.1:49756624-49756643 | MS.gene86635:intron | 45.0% | |
| GTAACATGATGCTTAAGGCG+TGG | - | chr6.1:49756052-49756071 | MS.gene86635:CDS | 45.0% | |
| GTTGTCCTCTCATACCTCAT+GGG | - | chr6.1:49755333-49755352 | MS.gene86635:intron | 45.0% | |
| TCCAGTGTGCCAGAAACAAA+TGG | - | chr6.1:49756748-49756767 | MS.gene86635:CDS | 45.0% | |
| TGGCACTATGCTTATGAGGT+GGG | + | chr6.1:49757201-49757220 | None:intergenic | 45.0% | |
| TGGTGCAGTTTCTCTCTAAG+TGG | + | chr6.1:49757298-49757317 | None:intergenic | 45.0% | |
| TGTCCAAGTTAGGACAGCAA+AGG | - | chr6.1:49757055-49757074 | MS.gene86635:CDS | 45.0% | |
| TTCCTTGCTCCTCAAGAGAA+AGG | - | chr6.1:49755934-49755953 | MS.gene86635:intron | 45.0% | |
| ! | ATGCACAAGAGTCTTTTGGC+GGG | - | chr6.1:49755839-49755858 | MS.gene86635:intron | 45.0% |
| ! | ATGTTGTGAATCGCGGGTTA+TGG | - | chr6.1:49754872-49754891 | MS.gene86635:intron | 45.0% |
| ! | GATGCACAAGAGTCTTTTGG+CGG | - | chr6.1:49755838-49755857 | MS.gene86635:intron | 45.0% |
| ! | GTGGATGCACAAGAGTCTTT+TGG | - | chr6.1:49755835-49755854 | MS.gene86635:intron | 45.0% |
| !! | ACCATTTGTTTCTGGCACAC+TGG | + | chr6.1:49756752-49756771 | None:intergenic | 45.0% |
| !! | TTTGTTTCTGGCACACTGGA+TGG | + | chr6.1:49756748-49756767 | None:intergenic | 45.0% |
| AAAGCCCTGAGCATGTGCAT+AGG | - | chr6.1:49755149-49755168 | MS.gene86635:intron | 50.0% | |
| AGAAGCAGCTGTCATTACGG+AGG | + | chr6.1:49756674-49756693 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGCTCA+CGG | + | chr6.1:49755245-49755264 | None:intergenic | 50.0% | |
| AGCCTTTCTCTTGAGGAGCA+AGG | + | chr6.1:49755939-49755958 | None:intergenic | 50.0% | |
| AGGGCATGTGTAGCATTTCC+AGG | + | chr6.1:49756990-49757009 | None:intergenic | 50.0% | |
| CATCGGCATCACAACCACAA+TGG | - | chr6.1:49755219-49755238 | MS.gene86635:intron | 50.0% | |
| CCAACACTGAAAGAGGGTTG+AGG | + | chr6.1:49756133-49756152 | None:intergenic | 50.0% | |
| CCCAGAAGCAGCTGTCATTA+CGG | + | chr6.1:49756677-49756696 | None:intergenic | 50.0% | |
| CCGTAATGACAGCTGCTTCT+GGG | - | chr6.1:49756674-49756693 | MS.gene86635:intron | 50.0% | |
| CCTCAACCCTCTTTCAGTGT+TGG | - | chr6.1:49756130-49756149 | MS.gene86635:intron | 50.0% | |
| CTAGTGCTGTCAAACAGCCA+CGG | + | chr6.1:49757662-49757681 | None:intergenic | 50.0% | |
| GACTGCTGAGGATGGTGATA+GGG | - | chr6.1:49756196-49756215 | MS.gene86635:intron | 50.0% | |
| GAGTATAGCTCCTTGTACCG+TGG | - | chr6.1:49757642-49757661 | MS.gene86635:intron | 50.0% | |
| GCAAGTAATTAGGTGGGGTC+TGG | + | chr6.1:49755576-49755595 | None:intergenic | 50.0% | |
| GCAGGACCCAAGTAAACTTG+TGG | - | chr6.1:49758150-49758169 | MS.gene86635:intron | 50.0% | |
| GGAGGATCCAACACTGAAAG+AGG | + | chr6.1:49756140-49756159 | None:intergenic | 50.0% | |
| GGAGTCATTGTCTTGGTCAC+TGG | - | chr6.1:49755862-49755881 | MS.gene86635:intron | 50.0% | |
| GGGTGTAGAGTAAGAGCCAA+GGG | + | chr6.1:49755468-49755487 | None:intergenic | 50.0% | |
| GGTTGTCCTCTCATACCTCA+TGG | - | chr6.1:49755332-49755351 | MS.gene86635:intron | 50.0% | |
| GTGATGCCGATGATACCATC+TGG | + | chr6.1:49755211-49755230 | None:intergenic | 50.0% | |
| TAGTGCGGAGATCCTATCTG+TGG | - | chr6.1:49755816-49755835 | MS.gene86635:intron | 50.0% | |
| TCAGCAAGAACCTCAGGAAC+AGG | + | chr6.1:49756281-49756300 | None:intergenic | 50.0% | |
| TCCGTAATGACAGCTGCTTC+TGG | - | chr6.1:49756673-49756692 | MS.gene86635:intron | 50.0% | |
| TGACTGCTGAGGATGGTGAT+AGG | - | chr6.1:49756195-49756214 | MS.gene86635:intron | 50.0% | |
| TGGGTGTAGAGTAAGAGCCA+AGG | + | chr6.1:49755469-49755488 | None:intergenic | 50.0% | |
| TGTCAAACAGCCACGGTACA+AGG | + | chr6.1:49757655-49757674 | None:intergenic | 50.0% | |
| TTACCATTCTCAGGAGAGGC+AGG | + | chr6.1:49756036-49756055 | None:intergenic | 50.0% | |
| TTTGGCCCTATCAAGAGTGG+CGG | - | chr6.1:49757032-49757051 | MS.gene86635:intron | 50.0% | |
| ! | ACAGACACTTGCCCCTTTTC+TGG | + | chr6.1:49756242-49756261 | None:intergenic | 50.0% |
| ! | CCGATGATACCATCTGGTTC+AGG | + | chr6.1:49755205-49755224 | None:intergenic | 50.0% |
| ! | GGTTGCCTTTTGACAGCTGA+GGG | - | chr6.1:49756939-49756958 | MS.gene86635:intron | 50.0% |
| ! | TGCACAAGAGTCTTTTGGCG+GGG | - | chr6.1:49755840-49755859 | MS.gene86635:intron | 50.0% |
| ! | TGGTTGCCTTTTGACAGCTG+AGG | - | chr6.1:49756938-49756957 | MS.gene86635:intron | 50.0% |
| !! | AGAAACAAGGGGTACCCATG+AGG | + | chr6.1:49755350-49755369 | None:intergenic | 50.0% |
| ACTTGTGTCTCCAGCACAGG+AGG | + | chr6.1:49756158-49756177 | None:intergenic | 55.0% | |
| AGAGGAAGCTCCTGTTCCTG+AGG | - | chr6.1:49756268-49756287 | MS.gene86635:intron | 55.0% | |
| AGAGTGGCGGTGTCCAAGTT+AGG | - | chr6.1:49757045-49757064 | MS.gene86635:intron | 55.0% | |
| CTTGGTCGTCCTGAACCAGA+TGG | - | chr6.1:49755193-49755212 | MS.gene86635:intron | 55.0% | |
| GCAGCTGTCATTACGGAGGA+CGG | + | chr6.1:49756670-49756689 | None:intergenic | 55.0% | |
| GGAACTTGTGTCTCCAGCAC+AGG | + | chr6.1:49756161-49756180 | None:intergenic | 55.0% | |
| GGACACCGCCACTCTTGATA+GGG | + | chr6.1:49757040-49757059 | None:intergenic | 55.0% | |
| GGGTACCCATGAGGTATGAG+AGG | + | chr6.1:49755341-49755360 | None:intergenic | 55.0% | |
| TCTCCTGCCTCTCCTGAGAA+TGG | - | chr6.1:49756030-49756049 | MS.gene86635:CDS | 55.0% | |
| TCTGGCACACTGGATGGTGA+AGG | + | chr6.1:49756742-49756761 | None:intergenic | 55.0% | |
| TGGACACCGCCACTCTTGAT+AGG | + | chr6.1:49757041-49757060 | None:intergenic | 55.0% | |
| TTCCTTCTTTGCCGCCTCCT+TGG | + | chr6.1:49758226-49758245 | None:intergenic | 55.0% | |
| ! | AGTGTTGGATCCTCCTGTGC+TGG | - | chr6.1:49756145-49756164 | MS.gene86635:intron | 55.0% |
| ! | GCACAAGAGTCTTTTGGCGG+GGG | - | chr6.1:49755841-49755860 | MS.gene86635:intron | 55.0% |
| !! | CATACAACATCAGGTGCCGG+AGG | + | chr6.1:49754822-49754841 | None:intergenic | 55.0% |
| ACCACCAGAAGCAGCAGCTG+GGG | + | chr6.1:49758188-49758207 | None:intergenic | 60.0% | |
| CACCACCAGAAGCAGCAGCT+GGG | + | chr6.1:49758189-49758208 | None:intergenic | 60.0% | |
| GAGAGAGCTCACGGCCATTG+TGG | + | chr6.1:49755236-49755255 | None:intergenic | 60.0% | |
| TGCCAAGGAGGCGGCAAAGA+AGG | - | chr6.1:49758221-49758240 | MS.gene86635:intron | 60.0% | |
| TGGCGGGGGAGTCATTGTCT+TGG | - | chr6.1:49755855-49755874 | MS.gene86635:intron | 60.0% | |
| CTTTGCCGCCTCCTTGGCAG+CGG | + | chr6.1:49758220-49758239 | None:intergenic | 65.0% | |
| GCACCACCAGAAGCAGCAGC+TGG | + | chr6.1:49758190-49758209 | None:intergenic | 65.0% | |
| CCTCCTTGGCAGCGGCAGCA+GGG | + | chr6.1:49758212-49758231 | None:intergenic | 70.0% | |
| TGCTGCCGCTGCCAAGGAGG+CGG | - | chr6.1:49758212-49758231 | MS.gene86635:intron | 70.0% | |
| ! | GCCCCAGCTGCTGCTTCTGG+TGG | - | chr6.1:49758184-49758203 | MS.gene86635:intron | 70.0% |
| ! | GCTGCCCCAGCTGCTGCTTC+TGG | - | chr6.1:49758181-49758200 | MS.gene86635:intron | 70.0% |
| CCCTGCTGCCGCTGCCAAGG+AGG | - | chr6.1:49758209-49758228 | MS.gene86635:intron | 75.0% | |
| GCCTCCTTGGCAGCGGCAGC+AGG | + | chr6.1:49758213-49758232 | None:intergenic | 75.0% | |
| GTGCCCTGCTGCCGCTGCCA+AGG | - | chr6.1:49758206-49758225 | MS.gene86635:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 49754795 | 49758302 | 49754795 | ID=MS.gene86635 |
| chr6.1 | mRNA | 49754795 | 49758302 | 49754795 | ID=MS.gene86635.t1;Parent=MS.gene86635 |
| chr6.1 | exon | 49758261 | 49758302 | 49758261 | ID=MS.gene86635.t1.exon1;Parent=MS.gene86635.t1 |
| chr6.1 | CDS | 49758261 | 49758302 | 49758261 | ID=cds.MS.gene86635.t1;Parent=MS.gene86635.t1 |
| chr6.1 | exon | 49757854 | 49757991 | 49757854 | ID=MS.gene86635.t1.exon2;Parent=MS.gene86635.t1 |
| chr6.1 | CDS | 49757854 | 49757991 | 49757854 | ID=cds.MS.gene86635.t1;Parent=MS.gene86635.t1 |
| chr6.1 | exon | 49757046 | 49757322 | 49757046 | ID=MS.gene86635.t1.exon3;Parent=MS.gene86635.t1 |
| chr6.1 | CDS | 49757046 | 49757322 | 49757046 | ID=cds.MS.gene86635.t1;Parent=MS.gene86635.t1 |
| chr6.1 | exon | 49756679 | 49756950 | 49756679 | ID=MS.gene86635.t1.exon4;Parent=MS.gene86635.t1 |
| chr6.1 | CDS | 49756679 | 49756950 | 49756679 | ID=cds.MS.gene86635.t1;Parent=MS.gene86635.t1 |
| chr6.1 | exon | 49756280 | 49756457 | 49756280 | ID=MS.gene86635.t1.exon5;Parent=MS.gene86635.t1 |
| chr6.1 | CDS | 49756280 | 49756457 | 49756280 | ID=cds.MS.gene86635.t1;Parent=MS.gene86635.t1 |
| chr6.1 | exon | 49756021 | 49756142 | 49756021 | ID=MS.gene86635.t1.exon6;Parent=MS.gene86635.t1 |
| chr6.1 | CDS | 49756021 | 49756142 | 49756021 | ID=cds.MS.gene86635.t1;Parent=MS.gene86635.t1 |
| chr6.1 | exon | 49754795 | 49754866 | 49754795 | ID=MS.gene86635.t1.exon7;Parent=MS.gene86635.t1 |
| chr6.1 | CDS | 49754795 | 49754866 | 49754795 | ID=cds.MS.gene86635.t1;Parent=MS.gene86635.t1 |
| Gene Sequence |
| Protein sequence |
