Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87215.t1 | RHN59169.1 | 60.4 | 503 | 154 | 8 | 1 | 482 | 1 | 479 | 1.80E-112 | 416.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87215.t1 | A0A396I0R2 | 60.4 | 503 | 154 | 8 | 1 | 482 | 1 | 479 | 1.3e-112 | 416.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05351 | MS.gene87215 | 0.806625 | 7.51E-50 | -1.69E-46 |
| MS.gene057814 | MS.gene87215 | 0.837321 | 5.57E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87215.t1 | MTR_2g102860 | 83.453 | 139 | 23 | 0 | 340 | 478 | 13 | 151 | 9.43e-69 | 217 |
| MS.gene87215.t1 | MTR_5g080310 | 79.866 | 149 | 26 | 1 | 334 | 482 | 122 | 266 | 9.67e-69 | 221 |
| MS.gene87215.t1 | MTR_0029s0140 | 83.333 | 144 | 24 | 0 | 332 | 475 | 241 | 384 | 1.38e-68 | 224 |
| MS.gene87215.t1 | MTR_0029s0140 | 44.681 | 188 | 96 | 1 | 160 | 339 | 162 | 349 | 4.44e-43 | 157 |
| MS.gene87215.t1 | MTR_4g017750 | 83.217 | 143 | 20 | 1 | 333 | 475 | 110 | 248 | 7.21e-68 | 218 |
| MS.gene87215.t1 | MTR_2g020090 | 68.790 | 157 | 48 | 1 | 319 | 475 | 49 | 204 | 8.09e-68 | 217 |
| MS.gene87215.t1 | MTR_3g058800 | 73.239 | 142 | 37 | 1 | 334 | 475 | 10 | 150 | 5.82e-66 | 210 |
| MS.gene87215.t1 | MTR_6g463490 | 83.761 | 117 | 19 | 0 | 362 | 478 | 3 | 119 | 2.31e-63 | 202 |
| MS.gene87215.t1 | MTR_1g023240 | 74.051 | 158 | 35 | 1 | 315 | 472 | 17 | 168 | 2.35e-62 | 204 |
| MS.gene87215.t1 | MTR_4g023110 | 73.134 | 134 | 35 | 1 | 332 | 465 | 7 | 139 | 4.56e-61 | 196 |
| MS.gene87215.t1 | MTR_8g027455 | 54.487 | 156 | 62 | 4 | 333 | 482 | 24 | 176 | 7.83e-43 | 157 |
| MS.gene87215.t1 | MTR_1g077650 | 66.346 | 104 | 34 | 1 | 333 | 436 | 46 | 148 | 2.54e-40 | 144 |
| MS.gene87215.t1 | MTR_5g053700 | 82.000 | 50 | 5 | 1 | 426 | 475 | 1 | 46 | 2.01e-18 | 79.3 |
| MS.gene87215.t1 | MTR_7g035425 | 37.037 | 108 | 55 | 3 | 176 | 273 | 179 | 283 | 1.86e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 158 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCTGGTTTAGGCTCTTTC+AGG | 0.183435 | 6.1:-30988822 | MS.gene87215:intron |
| CATGATTGAGGGTTAGTCTT+AGG | 0.184506 | 6.1:+30986674 | None:intergenic |
| TGGAGGGATTTGTTGTTGTT+GGG | 0.261186 | 6.1:+30989255 | None:intergenic |
| GTGGAGGGATTTGTTGTTGT+TGG | 0.265730 | 6.1:+30989254 | None:intergenic |
| CTGGCGTCAGCTCAGGCTGC+TGG | 0.280344 | 6.1:+30986638 | None:intergenic |
| TATGGCACCCTACCTCCTTA+TGG | 0.289334 | 6.1:-30989337 | MS.gene87215:CDS |
| TTGCCCTTGCTCTTTCCATT+AGG | 0.302043 | 6.1:+30989577 | None:intergenic |
| ATAACTGCTATCATCACTTT+TGG | 0.303053 | 6.1:-30988880 | MS.gene87215:CDS |
| TTGCTCTTTCCATTAGGTTT+CGG | 0.328125 | 6.1:+30989583 | None:intergenic |
| TAATGCAGACCAAGTGTTCT+TGG | 0.346146 | 6.1:-30988718 | MS.gene87215:intron |
| CCGGTTCTTCTTTGCTTTGT+CGG | 0.346522 | 6.1:+30988511 | None:intergenic |
| CTTGCCGAGGCTATTTCTAA+TGG | 0.350981 | 6.1:-30986823 | MS.gene87215:CDS |
| CCAGTACATCCTGGATATTA+TGG | 0.365206 | 6.1:-30989355 | MS.gene87215:CDS |
| TCTTCTAGCCAGGGTTCACC+TGG | 0.380100 | 6.1:-30989445 | MS.gene87215:CDS |
| CGCATCTCTGGCGTCAGCTC+AGG | 0.380128 | 6.1:+30986631 | None:intergenic |
| CGAGAATCTCTCGGATAATC+CGG | 0.382857 | 6.1:+30989058 | None:intergenic |
| ATGATTGAGGGTTAGTCTTA+GGG | 0.390145 | 6.1:+30986675 | None:intergenic |
| GGATTTGTTGTTGTTGGGGA+AGG | 0.398880 | 6.1:+30989260 | None:intergenic |
| TTGTCTCCTCAAACCGCATA+CGG | 0.400455 | 6.1:+30988615 | None:intergenic |
| ATGGCACCCTACCTCCTTAT+GGG | 0.404620 | 6.1:-30989336 | MS.gene87215:CDS |
| AGGAGCAGCTGGCACAGTTT+AGG | 0.406187 | 6.1:-30986510 | MS.gene87215:CDS |
| GAAGAACCGGGCGTCGGAAA+AGG | 0.413034 | 6.1:-30988498 | MS.gene87215:CDS |
| ATCTGCTACATCTTCTAGCC+AGG | 0.413120 | 6.1:-30989455 | MS.gene87215:CDS |
| GCTATACGGTCTTGGTAACT+TGG | 0.413255 | 6.1:-30986731 | MS.gene87215:CDS |
| GATTGCTTCAGCAGCCGGTT+TGG | 0.416531 | 6.1:+30988916 | None:intergenic |
| TGTTGTTGTTGGGGTTGTGG+TGG | 0.418549 | 6.1:+30989157 | None:intergenic |
| TGAATATGGTGGTAAATGAT+AGG | 0.419203 | 6.1:+30989297 | None:intergenic |
| GTTGTTGTTGGGGTTGTGGT+GGG | 0.422252 | 6.1:+30989158 | None:intergenic |
| TGAATAAGCTCCCGCATCTC+TGG | 0.423368 | 6.1:+30986619 | None:intergenic |
| CCGACAAAGCAAAGAAGAAC+CGG | 0.424122 | 6.1:-30988511 | MS.gene87215:CDS |
| GTTGTGGAGGGATTTGTTGT+AGG | 0.427635 | 6.1:+30989212 | None:intergenic |
| TGTTGTTGTTGGGGAACAGG+TGG | 0.434610 | 6.1:+30989184 | None:intergenic |
| AATGCAGACCAAGTGTTCTT+GGG | 0.435174 | 6.1:-30988717 | MS.gene87215:intron |
| GTTGTTGTTGGGGAACAGGT+GGG | 0.436449 | 6.1:+30989185 | None:intergenic |
| TTGCCGAGGCTATTTCTAAT+GGG | 0.436783 | 6.1:-30986822 | MS.gene87215:CDS |
| TGAGCTGACGCCAGAGATGC+GGG | 0.441007 | 6.1:-30986629 | MS.gene87215:CDS |
| TCCTCCTCATCTACCGGATA+AGG | 0.441120 | 6.1:+30986427 | None:intergenic |
| GGAATGCCTCCGAAACCTAA+TGG | 0.442258 | 6.1:-30989592 | MS.gene87215:CDS |
| GCAGAAGCCGTCGCAGGAGC+AGG | 0.442516 | 6.1:+30989403 | None:intergenic |
| CTCGTCGTCGATTCATCTTA+AGG | 0.445948 | 6.1:-30989039 | MS.gene87215:CDS |
| TGGCGTCAGCTCAGGCTGCT+GGG | 0.447507 | 6.1:+30986639 | None:intergenic |
| TTTCTTGTTGGGGCTGTGGT+GGG | 0.448866 | 6.1:+30989131 | None:intergenic |
| AAGAAGAAGGGAAAGCTATA+CGG | 0.450481 | 6.1:-30986745 | MS.gene87215:CDS |
| ACCGGATAAGGCTCAACATT+GGG | 0.453953 | 6.1:+30986439 | None:intergenic |
| CCATAATATCCAGGATGTAC+TGG | 0.458343 | 6.1:+30989355 | None:intergenic |
| TTGTGGAGGGATTTGTTGTA+GGG | 0.460385 | 6.1:+30989213 | None:intergenic |
| GGGATTTGTTGTAGGGAAGA+AGG | 0.460436 | 6.1:+30989220 | None:intergenic |
| GATCTGATTGCTTCAGCAGC+CGG | 0.463673 | 6.1:+30988911 | None:intergenic |
| TTAATTGCTCTTGCGTCAAA+CGG | 0.464925 | 6.1:+30986596 | None:intergenic |
| AGGACCCTTCACCATGATTG+AGG | 0.467659 | 6.1:+30986662 | None:intergenic |
| CAGGAGCAGGTACACTAGCC+TGG | 0.474014 | 6.1:+30989416 | None:intergenic |
| TCATGAAGCTCGTTAATAAA+CGG | 0.475717 | 6.1:+30988327 | None:intergenic |
| GGGTTCACCTGGGTCCTCCC+AGG | 0.480027 | 6.1:-30989434 | MS.gene87215:CDS |
| AAGGGAAAGCTATACGGTCT+TGG | 0.480141 | 6.1:-30986739 | MS.gene87215:CDS |
| GCTCCTCATATGACCTTTGA+CGG | 0.484551 | 6.1:+30986527 | None:intergenic |
| GGAGGGATTTGTTGTTGTTG+GGG | 0.486144 | 6.1:+30989256 | None:intergenic |
| TAGCACGCTCGTCGCAGTAT+TGG | 0.486252 | 6.1:+30988280 | None:intergenic |
| TTGATGCAACACTACCCTTC+CGG | 0.489648 | 6.1:+30986698 | None:intergenic |
| CATAGCTTCCCAAGAACACT+TGG | 0.490648 | 6.1:+30988709 | None:intergenic |
| TCCCAATGTTGAGCCTTATC+CGG | 0.490951 | 6.1:-30986440 | MS.gene87215:CDS |
| GCGGTATAATACTCACTTAG+TGG | 0.494631 | 6.1:-30989545 | MS.gene87215:CDS |
| AAGAACCGGGCGTCGGAAAA+GGG | 0.501037 | 6.1:-30988497 | MS.gene87215:CDS |
| CTCTTTCCATTAGGTTTCGG+AGG | 0.502358 | 6.1:+30989586 | None:intergenic |
| GAAAGAGCAAGGGCAACAGC+AGG | 0.505028 | 6.1:-30989570 | MS.gene87215:CDS |
| GGCACAGTTTAGGCAAGCTC+AGG | 0.505048 | 6.1:-30986500 | MS.gene87215:CDS |
| CGAAGAGGGTGGTGGAGAGC+TGG | 0.506575 | 6.1:-30989101 | MS.gene87215:CDS |
| GCAGTAGAAATGACAGGCAT+CGG | 0.507512 | 6.1:+30989496 | None:intergenic |
| ATTCTTTGACCTTCAACACT+TGG | 0.510375 | 6.1:-30986786 | MS.gene87215:CDS |
| AAGATTTGCTTAACCGTCAA+AGG | 0.511841 | 6.1:-30986540 | MS.gene87215:CDS |
| TGAGGAGCAGAAGCCGTCGC+AGG | 0.513097 | 6.1:+30989397 | None:intergenic |
| AATACTGCGACGAGCGTGCT+AGG | 0.515851 | 6.1:-30988278 | MS.gene87215:CDS |
| TTTGTTGTAGGGAAGAAGGT+GGG | 0.521691 | 6.1:+30989224 | None:intergenic |
| ATGATAGCAGTTATGAATGA+TGG | 0.523463 | 6.1:+30988889 | None:intergenic |
| GCTTCAGCAGCCGGTTTGGA+AGG | 0.524446 | 6.1:+30988920 | None:intergenic |
| TATGGTGGTAAATGATAGGT+CGG | 0.525246 | 6.1:+30989301 | None:intergenic |
| GGAGGAAGGAAGGTCCCATA+AGG | 0.527593 | 6.1:+30989322 | None:intergenic |
| GGACCCTTCACCATGATTGA+GGG | 0.531656 | 6.1:+30986663 | None:intergenic |
| TACTGGAGGGCACATGTAAG+TGG | 0.532234 | 6.1:+30989372 | None:intergenic |
| TCATCATCCTCCTCATCTAC+CGG | 0.536805 | 6.1:+30986421 | None:intergenic |
| CAGTAGAAATGACAGGCATC+GGG | 0.537420 | 6.1:+30989497 | None:intergenic |
| TAACCGTCAAAGGTCATATG+AGG | 0.541572 | 6.1:-30986530 | MS.gene87215:CDS |
| GGTAGGGTGCCATAATATCC+AGG | 0.544917 | 6.1:+30989346 | None:intergenic |
| TTAAAAGCGGCGCACTAGTG+TGG | 0.545514 | 6.1:+30986464 | None:intergenic |
| AAGGTCATATGAGGAGCAGC+TGG | 0.546890 | 6.1:-30986521 | MS.gene87215:CDS |
| AGGAGCAGGTACACTAGCCT+GGG | 0.550263 | 6.1:+30989417 | None:intergenic |
| TAAAAGCGGCGCACTAGTGT+GGG | 0.551339 | 6.1:+30986465 | None:intergenic |
| CTGAGCTGACGCCAGAGATG+CGG | 0.553348 | 6.1:-30986630 | MS.gene87215:CDS |
| CAAGAAAATGTGGTCGAAGA+GGG | 0.555530 | 6.1:-30989115 | MS.gene87215:CDS |
| AAATAGCCTCGGCAAGCTGC+CGG | 0.555959 | 6.1:+30986830 | None:intergenic |
| ATGTGCCCTCCAGTACATCC+TGG | 0.557262 | 6.1:-30989364 | MS.gene87215:CDS |
| CGAGCGTGCTAGGAGTGTGC+AGG | 0.557294 | 6.1:-30988268 | MS.gene87215:intron |
| AGTTGCTGGAGACAAGAAGA+AGG | 0.557374 | 6.1:-30986758 | MS.gene87215:CDS |
| TACCGGATAAGGCTCAACAT+TGG | 0.558734 | 6.1:+30986438 | None:intergenic |
| GGGAGGACCCAGGTGAACCC+TGG | 0.559461 | 6.1:+30989437 | None:intergenic |
| ATAGGCTAGGAGGTTACGTC+GGG | 0.559517 | 6.1:-30988352 | MS.gene87215:intron |
| CTAAGACTAACCCTCAATCA+TGG | 0.562434 | 6.1:-30986673 | MS.gene87215:CDS |
| GGAAGGTCCCATAAGGAGGT+AGG | 0.563395 | 6.1:+30989329 | None:intergenic |
| GCAAGGGCAACAGCAGGAAG+CGG | 0.568162 | 6.1:-30989564 | MS.gene87215:CDS |
| GTAACTTGGCTGCTAACTAC+CGG | 0.570124 | 6.1:-30986717 | MS.gene87215:CDS |
| ACGCTCGTCGCAGTATTGGC+CGG | 0.570260 | 6.1:+30988284 | None:intergenic |
| TGTCTCCTCAAACCGCATAC+GGG | 0.571839 | 6.1:+30988616 | None:intergenic |
| AATGTGGTCGAAGAGGGTGG+TGG | 0.572688 | 6.1:-30989109 | MS.gene87215:CDS |
| ACTGGTGGTTGCTGAGCGTA+TGG | 0.574441 | 6.1:-30988461 | MS.gene87215:intron |
| TCTGCTACATCTTCTAGCCA+GGG | 0.575189 | 6.1:-30989454 | MS.gene87215:CDS |
| ATGATAGGTCGGAGGAAGGA+AGG | 0.575427 | 6.1:+30989312 | None:intergenic |
| CTTAGTGGACGCAGCGACAG+AGG | 0.579770 | 6.1:-30989530 | MS.gene87215:CDS |
| AGCAAAGAAGAACCGGGCGT+CGG | 0.582886 | 6.1:-30988504 | MS.gene87215:CDS |
| AGAGCAATTAACGCAGCAGA+TGG | 0.584639 | 6.1:-30986584 | MS.gene87215:CDS |
| TTGAACAGGAGGAGTATGAC+CGG | 0.586858 | 6.1:-30986849 | MS.gene87215:intron |
| GTAAATGATAGGTCGGAGGA+AGG | 0.587191 | 6.1:+30989308 | None:intergenic |
| CTAACCCTCAATCATGGTGA+AGG | 0.587704 | 6.1:-30986667 | MS.gene87215:CDS |
| TTTAGGCAAGCTCAGGCTCA+AGG | 0.588836 | 6.1:-30986493 | MS.gene87215:CDS |
| TGAACTTACGAGTTTCCACT+AGG | 0.589440 | 6.1:+30989016 | None:intergenic |
| GGGCACATGTAAGTGGGATG+AGG | 0.589794 | 6.1:+30989379 | None:intergenic |
| GTAGATGCAGTAGAAATGAC+AGG | 0.591240 | 6.1:+30989490 | None:intergenic |
| GAAGGTCCCATAAGGAGGTA+GGG | 0.591901 | 6.1:+30989330 | None:intergenic |
| GAAACCTAATGGAAAGAGCA+AGG | 0.595131 | 6.1:-30989581 | MS.gene87215:CDS |
| GAGAATCTCTCGGATAATCC+GGG | 0.595824 | 6.1:+30989059 | None:intergenic |
| TAGTGTACCTGCTCCTGCGA+CGG | 0.598519 | 6.1:-30989410 | MS.gene87215:CDS |
| AAGCGGCGCACTAGTGTGGG+AGG | 0.600468 | 6.1:+30986468 | None:intergenic |
| GTATGACCGGCAGCTTGCCG+AGG | 0.601524 | 6.1:-30986836 | MS.gene87215:CDS |
| CGATTCATCTTAAGGCCTAG+TGG | 0.601629 | 6.1:-30989031 | MS.gene87215:CDS |
| CGACAAAGCAAAGAAGAACC+GGG | 0.601764 | 6.1:-30988510 | MS.gene87215:CDS |
| CTTCTAGCCAGGGTTCACCT+GGG | 0.603050 | 6.1:-30989444 | MS.gene87215:CDS |
| ACAAGAAAATGTGGTCGAAG+AGG | 0.610168 | 6.1:-30989116 | MS.gene87215:CDS |
| ATTTGTTGTAGGGAAGAAGG+TGG | 0.610524 | 6.1:+30989223 | None:intergenic |
| TACTTAGAAGAGCCCGTATG+CGG | 0.616606 | 6.1:-30988628 | MS.gene87215:intron |
| GGAAGGAAGGTCCCATAAGG+AGG | 0.617014 | 6.1:+30989325 | None:intergenic |
| GATGTTTAATGATGTTTACC+CGG | 0.618633 | 6.1:-30989077 | MS.gene87215:CDS |
| GCCTTATCCGGTAGATGAGG+AGG | 0.618778 | 6.1:-30986428 | MS.gene87215:CDS |
| TAATATCCAGGATGTACTGG+AGG | 0.622903 | 6.1:+30989358 | None:intergenic |
| CTTGGCTGCTAACTACCGGA+AGG | 0.625442 | 6.1:-30986713 | MS.gene87215:CDS |
| GTTGCTGGAGACAAGAAGAA+GGG | 0.632114 | 6.1:-30986757 | MS.gene87215:CDS |
| AATAGGCTAGGAGGTTACGT+CGG | 0.632889 | 6.1:-30988353 | MS.gene87215:intron |
| AATCGACGACGAGAATCTCT+CGG | 0.634346 | 6.1:+30989049 | None:intergenic |
| TAACCCTCAATCATGGTGAA+GGG | 0.637969 | 6.1:-30986666 | MS.gene87215:CDS |
| TGTGGTGGGACTGAATATGG+TGG | 0.638237 | 6.1:+30989286 | None:intergenic |
| GGTAGATGAGGAGGATGATG+AGG | 0.638477 | 6.1:-30986419 | MS.gene87215:CDS |
| GCAGCAGATGGCAAGTCAAG+CGG | 0.638666 | 6.1:-30986572 | MS.gene87215:CDS |
| CATGTGACAAATAGGCTAGG+AGG | 0.639349 | 6.1:-30988362 | MS.gene87215:intron |
| TGAGCCTTATCCGGTAGATG+AGG | 0.639385 | 6.1:-30986431 | MS.gene87215:CDS |
| AAACCTAATGGAAAGAGCAA+GGG | 0.642664 | 6.1:-30989580 | MS.gene87215:CDS |
| AGACCCATTAGAAATAGCCT+CGG | 0.644902 | 6.1:+30986819 | None:intergenic |
| ACACTAGCCTGGGAGGACCC+AGG | 0.645467 | 6.1:+30989427 | None:intergenic |
| GGTGGTAAATGATAGGTCGG+AGG | 0.646104 | 6.1:+30989304 | None:intergenic |
| CGTCAGCTCAGGCTGCTGGG+AGG | 0.651312 | 6.1:+30986642 | None:intergenic |
| TTGGAAGACATATGGTGATG+TGG | 0.652180 | 6.1:-30988861 | MS.gene87215:CDS |
| TCAACATTGGGACTTAAAAG+CGG | 0.654070 | 6.1:+30986451 | None:intergenic |
| AGCGGCGCACTAGTGTGGGA+GGG | 0.654626 | 6.1:+30986469 | None:intergenic |
| AGCAGGTACACTAGCCTGGG+AGG | 0.658527 | 6.1:+30989420 | None:intergenic |
| TTGGCTGCTAACTACCGGAA+GGG | 0.659168 | 6.1:-30986712 | MS.gene87215:CDS |
| GGAGGATGCATTCACACTGG+TGG | 0.660778 | 6.1:-30988476 | MS.gene87215:CDS |
| GAAAATGTGGTCGAAGAGGG+TGG | 0.661104 | 6.1:-30989112 | MS.gene87215:CDS |
| AACCGGGCGTCGGAAAAGGG+AGG | 0.663571 | 6.1:-30988494 | MS.gene87215:CDS |
| ACAGCCCCAACAAGAAAATG+TGG | 0.669400 | 6.1:-30989125 | MS.gene87215:CDS |
| AAGGGAGGATGCATTCACAC+TGG | 0.674246 | 6.1:-30988479 | MS.gene87215:CDS |
| AATATCCAGGATGTACTGGA+GGG | 0.686056 | 6.1:+30989359 | None:intergenic |
| ACTGGAGGGCACATGTAAGT+GGG | 0.711086 | 6.1:+30989373 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATAATAAACAAAATA+AGG | + | chr6.1:30989047-30989066 | None:intergenic | 10.0% |
| !! | ACAATCAAAATTAAATGATA+TGG | + | chr6.1:30987596-30987615 | None:intergenic | 15.0% |
| !!! | AAAATTGAGGATTTTATAAA+AGG | - | chr6.1:30987960-30987979 | MS.gene87215:intron | 15.0% |
| !!! | TATTTTGTTATTATTTGAAC+AGG | - | chr6.1:30989140-30989159 | MS.gene87215:CDS | 15.0% |
| !! | CAGTAAAAATGAAATTGATA+TGG | + | chr6.1:30988211-30988230 | None:intergenic | 20.0% |
| !! | TATAAAGATTAAGAACACAT+TGG | + | chr6.1:30988874-30988893 | None:intergenic | 20.0% |
| !! | TGAAAAATTTGAGAAAAATC+AGG | - | chr6.1:30988120-30988139 | MS.gene87215:intron | 20.0% |
| !!! | AAGCCTTATAATATCTATTT+AGG | + | chr6.1:30988574-30988593 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTAATCCGAATTG+TGG | - | chr6.1:30987851-30987870 | MS.gene87215:intron | 20.0% |
| !!! | TTTTATTTCATGTGACAAAT+AGG | - | chr6.1:30987633-30987652 | MS.gene87215:intron | 20.0% |
| ! | AAAATATTTAAGGACAGAAC+TGG | + | chr6.1:30989126-30989145 | None:intergenic | 25.0% |
| ! | AAGGAAACTAATCATAAGAA+TGG | + | chr6.1:30989028-30989047 | None:intergenic | 25.0% |
| ! | AATTTCAGTTAAGCAAAAGT+TGG | + | chr6.1:30987884-30987903 | None:intergenic | 25.0% |
| ! | ACAAATTCATAAGCAATAAC+AGG | + | chr6.1:30988446-30988465 | None:intergenic | 25.0% |
| ! | ATTTCAGTTAAGCAAAAGTT+GGG | + | chr6.1:30987883-30987902 | None:intergenic | 25.0% |
| ! | CAAATTCATAAGCAATAACA+GGG | + | chr6.1:30988445-30988464 | None:intergenic | 25.0% |
| ! | GAAAACTATATAGAATCAAG+TGG | + | chr6.1:30988785-30988804 | None:intergenic | 25.0% |
| ! | TGGCCTAAATAGATATTATA+AGG | - | chr6.1:30988568-30988587 | MS.gene87215:intron | 25.0% |
| ! | TGTTGTTGAATTTCTCTAAT+TGG | - | chr6.1:30988229-30988248 | MS.gene87215:intron | 25.0% |
| !! | ACTTTTGCTTAACTGAAATT+TGG | - | chr6.1:30987884-30987903 | MS.gene87215:intron | 25.0% |
| !! | TAGAATTTAGAACTTATCAC+AGG | - | chr6.1:30988839-30988858 | MS.gene87215:CDS | 25.0% |
| !! | TGTTTCTGTCAAAAAAATTG+AGG | - | chr6.1:30987947-30987966 | MS.gene87215:intron | 25.0% |
| !!! | GCTTTTTGAAAGAATAGAAA+AGG | - | chr6.1:30988169-30988188 | MS.gene87215:intron | 25.0% |
| !!! | TTTGTTATTATTTGAACAGG+AGG | - | chr6.1:30989143-30989162 | MS.gene87215:CDS | 25.0% |
| AAAACTGAGTACTAAGGTAA+GGG | + | chr6.1:30988603-30988622 | None:intergenic | 30.0% | |
| AAAGTCGATTAAAATTACCG+CGG | + | chr6.1:30988401-30988420 | None:intergenic | 30.0% | |
| AAGACTCATAAGTCAACATT+AGG | + | chr6.1:30988356-30988375 | None:intergenic | 30.0% | |
| AATAACAGAGAAACAGTGTA+AGG | + | chr6.1:30989096-30989115 | None:intergenic | 30.0% | |
| AATGACAAATAAGACAGAAC+TGG | + | chr6.1:30987825-30987844 | None:intergenic | 30.0% | |
| ATGATAGCAGTTATGAATGA+TGG | + | chr6.1:30987117-30987136 | None:intergenic | 30.0% | |
| CATTACATAGCTCAATTCTT+CGG | + | chr6.1:30988277-30988296 | None:intergenic | 30.0% | |
| GATGTTTAATGATGTTTACC+CGG | - | chr6.1:30986926-30986945 | MS.gene87215:intron | 30.0% | |
| TCATGAAGCTCGTTAATAAA+CGG | + | chr6.1:30987679-30987698 | None:intergenic | 30.0% | |
| TGAATATGGTGGTAAATGAT+AGG | + | chr6.1:30986709-30986728 | None:intergenic | 30.0% | |
| TGAGACTTATGATAAAACTC+TGG | + | chr6.1:30988057-30988076 | None:intergenic | 30.0% | |
| TGGTGAATTGGTTAAGTATT+GGG | - | chr6.1:30987445-30987464 | MS.gene87215:intron | 30.0% | |
| TGTGAATTATGATCGATTGT+TGG | - | chr6.1:30988007-30988026 | MS.gene87215:intron | 30.0% | |
| TTAACCAATTCACCAAAGAT+AGG | + | chr6.1:30987440-30987459 | None:intergenic | 30.0% | |
| TTATGATAAAACTCTGGTGA+GGG | + | chr6.1:30988051-30988070 | None:intergenic | 30.0% | |
| TTGGTGAATTGGTTAAGTAT+TGG | - | chr6.1:30987444-30987463 | MS.gene87215:intron | 30.0% | |
| TTTCAGTTAAGCAAAAGTTG+GGG | + | chr6.1:30987882-30987901 | None:intergenic | 30.0% | |
| TTTGTGTTATAGATGTCTTG+CGG | - | chr6.1:30988461-30988480 | MS.gene87215:intron | 30.0% | |
| ! | ATAACTGCTATCATCACTTT+TGG | - | chr6.1:30987123-30987142 | MS.gene87215:intron | 30.0% |
| ! | CTCTTGTTCTAGATATGATT+TGG | - | chr6.1:30987913-30987932 | MS.gene87215:intron | 30.0% |
| ! | TTTTCTTGCAATCACATAAC+AGG | + | chr6.1:30988962-30988981 | None:intergenic | 30.0% |
| !! | GTTCTGTCTTATTTGTCATT+TGG | - | chr6.1:30987825-30987844 | MS.gene87215:intron | 30.0% |
| !!! | AACTTTTTTCCAAGTGTTGA+AGG | + | chr6.1:30989229-30989248 | None:intergenic | 30.0% |
| AAACCTAATGGAAAGAGCAA+GGG | - | chr6.1:30986423-30986442 | MS.gene87215:CDS | 35.0% | |
| AACACTTGGAAAAAAGTTGC+TGG | - | chr6.1:30989231-30989250 | MS.gene87215:CDS | 35.0% | |
| AAGAAGAAGGGAAAGCTATA+CGG | - | chr6.1:30989258-30989277 | MS.gene87215:CDS | 35.0% | |
| AAGATTAAGAACACATTGGC+TGG | + | chr6.1:30988870-30988889 | None:intergenic | 35.0% | |
| ATTCTTTGACCTTCAACACT+TGG | - | chr6.1:30989217-30989236 | MS.gene87215:CDS | 35.0% | |
| CAAAACTGAGTACTAAGGTA+AGG | + | chr6.1:30988604-30988623 | None:intergenic | 35.0% | |
| CGAAGAATTGAGCTATGTAA+TGG | - | chr6.1:30988275-30988294 | MS.gene87215:CDS | 35.0% | |
| CGCAAGTTGTAATTGCTTAT+AGG | + | chr6.1:30988936-30988955 | None:intergenic | 35.0% | |
| CTAGCACACATAATTATCTC+AGG | + | chr6.1:30988097-30988116 | None:intergenic | 35.0% | |
| CTTATGATAAAACTCTGGTG+AGG | + | chr6.1:30988052-30988071 | None:intergenic | 35.0% | |
| GAAACGCACAAAAATAAGTC+CGG | - | chr6.1:30987700-30987719 | MS.gene87215:intron | 35.0% | |
| TATGGTGGTAAATGATAGGT+CGG | + | chr6.1:30986705-30986724 | None:intergenic | 35.0% | |
| TCAACATTGGGACTTAAAAG+CGG | + | chr6.1:30989555-30989574 | None:intergenic | 35.0% | |
| TTAATTGCTCTTGCGTCAAA+CGG | + | chr6.1:30989410-30989429 | None:intergenic | 35.0% | |
| TTGCTCTTTCCATTAGGTTT+CGG | + | chr6.1:30986423-30986442 | None:intergenic | 35.0% | |
| TTTCATGTGACAAATAGGCT+AGG | - | chr6.1:30987638-30987657 | MS.gene87215:intron | 35.0% | |
| ! | AAGATTTGCTTAACCGTCAA+AGG | - | chr6.1:30989463-30989482 | MS.gene87215:CDS | 35.0% |
| ! | ATGATAATGAAAAAGAGCGC+TGG | - | chr6.1:30987165-30987184 | MS.gene87215:intron | 35.0% |
| ! | TACCTTAGTACTCAGTTTTG+TGG | - | chr6.1:30988604-30988623 | MS.gene87215:intron | 35.0% |
| ! | TTCGACCACATTTTCTTGTT+GGG | + | chr6.1:30986886-30986905 | None:intergenic | 35.0% |
| ! | TTTTAATCCGAATTGTGGTC+TGG | - | chr6.1:30987856-30987875 | MS.gene87215:intron | 35.0% |
| !! | ACCTTAGTACTCAGTTTTGT+GGG | - | chr6.1:30988605-30988624 | MS.gene87215:intron | 35.0% |
| !! | ATGATTGAGGGTTAGTCTTA+GGG | + | chr6.1:30989331-30989350 | None:intergenic | 35.0% |
| !! | CATCACTTTTGGAAGACATA+TGG | - | chr6.1:30987134-30987153 | MS.gene87215:intron | 35.0% |
| !! | CGACTTTGTTGATTCTTACA+AGG | - | chr6.1:30988414-30988433 | MS.gene87215:intron | 35.0% |
| !!! | GCACTATTTTTGTTGCAGTT+TGG | - | chr6.1:30987797-30987816 | MS.gene87215:intron | 35.0% |
| AATATCCAGGATGTACTGGA+GGG | + | chr6.1:30986647-30986666 | None:intergenic | 40.0% | |
| AATGCAGACCAAGTGTTCTT+GGG | - | chr6.1:30987286-30987305 | MS.gene87215:intron | 40.0% | |
| ACAAGAAAATGTGGTCGAAG+AGG | - | chr6.1:30986887-30986906 | MS.gene87215:intron | 40.0% | |
| ACCAATTCACCAAAGATAGG+CGG | + | chr6.1:30987437-30987456 | None:intergenic | 40.0% | |
| AGACCCATTAGAAATAGCCT+CGG | + | chr6.1:30989187-30989206 | None:intergenic | 40.0% | |
| ATCTCAGGAGTTGCATCTTT+AGG | + | chr6.1:30988082-30988101 | None:intergenic | 40.0% | |
| ATTTAAGGACAGAACTGGCA+AGG | + | chr6.1:30989121-30989140 | None:intergenic | 40.0% | |
| CAAGAAAATGTGGTCGAAGA+GGG | - | chr6.1:30986888-30986907 | MS.gene87215:intron | 40.0% | |
| CCAGTACATCCTGGATATTA+TGG | - | chr6.1:30986648-30986667 | MS.gene87215:CDS | 40.0% | |
| CCATAATATCCAGGATGTAC+TGG | + | chr6.1:30986651-30986670 | None:intergenic | 40.0% | |
| CTAAGACTAACCCTCAATCA+TGG | - | chr6.1:30989330-30989349 | MS.gene87215:CDS | 40.0% | |
| GAAACCTAATGGAAAGAGCA+AGG | - | chr6.1:30986422-30986441 | MS.gene87215:CDS | 40.0% | |
| GAAGGTGATGAATGATACAG+AGG | + | chr6.1:30988500-30988519 | None:intergenic | 40.0% | |
| GCGGTATAATACTCACTTAG+TGG | - | chr6.1:30986458-30986477 | MS.gene87215:CDS | 40.0% | |
| GTAGATGCAGTAGAAATGAC+AGG | + | chr6.1:30986516-30986535 | None:intergenic | 40.0% | |
| TAACCCTCAATCATGGTGAA+GGG | - | chr6.1:30989337-30989356 | MS.gene87215:CDS | 40.0% | |
| TAACCGTCAAAGGTCATATG+AGG | - | chr6.1:30989473-30989492 | MS.gene87215:CDS | 40.0% | |
| TAATATCCAGGATGTACTGG+AGG | + | chr6.1:30986648-30986667 | None:intergenic | 40.0% | |
| TAATGCAGACCAAGTGTTCT+TGG | - | chr6.1:30987285-30987304 | MS.gene87215:intron | 40.0% | |
| TCCCACAAAACTGAGTACTA+AGG | + | chr6.1:30988609-30988628 | None:intergenic | 40.0% | |
| TCTATTTAGGCCATGTCTCT+AGG | + | chr6.1:30988561-30988580 | None:intergenic | 40.0% | |
| TGAACTTACGAGTTTCCACT+AGG | + | chr6.1:30986990-30987009 | None:intergenic | 40.0% | |
| TGTCTCTAGGCAATGAAGAA+CGG | + | chr6.1:30988548-30988567 | None:intergenic | 40.0% | |
| TTAAAATTACCGCGGACAGA+TGG | + | chr6.1:30988393-30988412 | None:intergenic | 40.0% | |
| TTCTTCATTGCCTAGAGACA+TGG | - | chr6.1:30988548-30988567 | MS.gene87215:intron | 40.0% | |
| ! | CTTCGACCACATTTTCTTGT+TGG | + | chr6.1:30986887-30986906 | None:intergenic | 40.0% |
| ! | CTTGTCGTATCTCTCAGTTT+TGG | - | chr6.1:30987762-30987781 | MS.gene87215:intron | 40.0% |
| ! | TCGACCACATTTTCTTGTTG+GGG | + | chr6.1:30986885-30986904 | None:intergenic | 40.0% |
| ! | TTGGAAGACATATGGTGATG+TGG | - | chr6.1:30987142-30987161 | MS.gene87215:intron | 40.0% |
| ! | TTTGTTGTAGGGAAGAAGGT+GGG | + | chr6.1:30986782-30986801 | None:intergenic | 40.0% |
| !! | ATGAAAAAGAGCGCTGGTTT+AGG | - | chr6.1:30987171-30987190 | MS.gene87215:intron | 40.0% |
| !! | ATTTGTTGTAGGGAAGAAGG+TGG | + | chr6.1:30986783-30986802 | None:intergenic | 40.0% |
| !! | CATGATTGAGGGTTAGTCTT+AGG | + | chr6.1:30989332-30989351 | None:intergenic | 40.0% |
| !! | TGGAGGGATTTGTTGTTGTT+GGG | + | chr6.1:30986751-30986770 | None:intergenic | 40.0% |
| !! | TTGCCGAGGCTATTTCTAAT+GGG | - | chr6.1:30989181-30989200 | MS.gene87215:CDS | 40.0% |
| !! | TTGTGGAGGGATTTGTTGTA+GGG | + | chr6.1:30986793-30986812 | None:intergenic | 40.0% |
| !! | TTTTGTGGTGGGACTGAATA+TGG | + | chr6.1:30986723-30986742 | None:intergenic | 40.0% |
| !!! | TGGTGGGTTTTGTTGTTGTT+GGG | + | chr6.1:30986832-30986851 | None:intergenic | 40.0% |
| !!! | TTTTGTTGTTGTTGGGGAAC+AGG | + | chr6.1:30986825-30986844 | None:intergenic | 40.0% |
| !!! | TTTTGTTGTTGTTGGGGTTG+TGG | + | chr6.1:30986852-30986871 | None:intergenic | 40.0% |
| AAGGGAAAGCTATACGGTCT+TGG | - | chr6.1:30989264-30989283 | MS.gene87215:CDS | 45.0% | |
| AATAGGCTAGGAGGTTACGT+CGG | - | chr6.1:30987650-30987669 | MS.gene87215:intron | 45.0% | |
| AATCGACGACGAGAATCTCT+CGG | + | chr6.1:30986957-30986976 | None:intergenic | 45.0% | |
| ACAGCCCCAACAAGAAAATG+TGG | - | chr6.1:30986878-30986897 | MS.gene87215:intron | 45.0% | |
| ACCGGATAAGGCTCAACATT+GGG | + | chr6.1:30989567-30989586 | None:intergenic | 45.0% | |
| AGAGCAATTAACGCAGCAGA+TGG | - | chr6.1:30989419-30989438 | MS.gene87215:CDS | 45.0% | |
| AGTTGCTGGAGACAAGAAGA+AGG | - | chr6.1:30989245-30989264 | MS.gene87215:CDS | 45.0% | |
| ATCTGCTACATCTTCTAGCC+AGG | - | chr6.1:30986548-30986567 | MS.gene87215:CDS | 45.0% | |
| CAGTAGAAATGACAGGCATC+GGG | + | chr6.1:30986509-30986528 | None:intergenic | 45.0% | |
| CATAGCTTCCCAAGAACACT+TGG | + | chr6.1:30987297-30987316 | None:intergenic | 45.0% | |
| CATGTGACAAATAGGCTAGG+AGG | - | chr6.1:30987641-30987660 | MS.gene87215:intron | 45.0% | |
| CCAATTCACCAAAGATAGGC+GGG | + | chr6.1:30987436-30987455 | None:intergenic | 45.0% | |
| CCGACAAAGCAAAGAAGAAC+CGG | - | chr6.1:30987492-30987511 | MS.gene87215:intron | 45.0% | |
| CCGGTTCTTCTTTGCTTTGT+CGG | + | chr6.1:30987495-30987514 | None:intergenic | 45.0% | |
| CGACAAAGCAAAGAAGAACC+GGG | - | chr6.1:30987493-30987512 | MS.gene87215:intron | 45.0% | |
| CGAGAATCTCTCGGATAATC+CGG | + | chr6.1:30986948-30986967 | None:intergenic | 45.0% | |
| CGATTCATCTTAAGGCCTAG+TGG | - | chr6.1:30986972-30986991 | MS.gene87215:intron | 45.0% | |
| CTAACCCTCAATCATGGTGA+AGG | - | chr6.1:30989336-30989355 | MS.gene87215:CDS | 45.0% | |
| CTCTTTCCATTAGGTTTCGG+AGG | + | chr6.1:30986420-30986439 | None:intergenic | 45.0% | |
| GAGAATCTCTCGGATAATCC+GGG | + | chr6.1:30986947-30986966 | None:intergenic | 45.0% | |
| GATAAAACTCTGGTGAGGGA+AGG | + | chr6.1:30988047-30988066 | None:intergenic | 45.0% | |
| GCAGTAGAAATGACAGGCAT+CGG | + | chr6.1:30986510-30986529 | None:intergenic | 45.0% | |
| GCTCCTCATATGACCTTTGA+CGG | + | chr6.1:30989479-30989498 | None:intergenic | 45.0% | |
| GGTTTGAGGAGACAAGAAAG+CGG | - | chr6.1:30987396-30987415 | MS.gene87215:intron | 45.0% | |
| GTAAATGATAGGTCGGAGGA+AGG | + | chr6.1:30986698-30986717 | None:intergenic | 45.0% | |
| GTAACTTGGCTGCTAACTAC+CGG | - | chr6.1:30989286-30989305 | MS.gene87215:CDS | 45.0% | |
| GTTGCTGGAGACAAGAAGAA+GGG | - | chr6.1:30989246-30989265 | MS.gene87215:CDS | 45.0% | |
| TACCGGATAAGGCTCAACAT+TGG | + | chr6.1:30989568-30989587 | None:intergenic | 45.0% | |
| TACTTAGAAGAGCCCGTATG+CGG | - | chr6.1:30987375-30987394 | MS.gene87215:intron | 45.0% | |
| TAGATGTCTTGCGGCAACTT+TGG | - | chr6.1:30988470-30988489 | MS.gene87215:CDS | 45.0% | |
| TCATCATCCTCCTCATCTAC+CGG | + | chr6.1:30989585-30989604 | None:intergenic | 45.0% | |
| TCTGCTACATCTTCTAGCCA+GGG | - | chr6.1:30986549-30986568 | MS.gene87215:CDS | 45.0% | |
| TTGATGCAACACTACCCTTC+CGG | + | chr6.1:30989308-30989327 | None:intergenic | 45.0% | |
| TTGCCCTTGCTCTTTCCATT+AGG | + | chr6.1:30986429-30986448 | None:intergenic | 45.0% | |
| TTGTCTCCTCAAACCGCATA+CGG | + | chr6.1:30987391-30987410 | None:intergenic | 45.0% | |
| TTGTGATATCAGCAGCAACG+AGG | + | chr6.1:30988301-30988320 | None:intergenic | 45.0% | |
| ! | ACATTTTCTTGTTGGGGCTG+TGG | + | chr6.1:30986879-30986898 | None:intergenic | 45.0% |
| ! | CAGCTTTTTGCCTTCCAAAC+CGG | - | chr6.1:30987073-30987092 | MS.gene87215:intron | 45.0% |
| ! | GCTATACGGTCTTGGTAACT+TGG | - | chr6.1:30989272-30989291 | MS.gene87215:CDS | 45.0% |
| ! | TCCCAATGTTGAGCCTTATC+CGG | - | chr6.1:30989563-30989582 | MS.gene87215:CDS | 45.0% |
| ! | TGTTGTTGGGGAAGGTTTTG+TGG | + | chr6.1:30986738-30986757 | None:intergenic | 45.0% |
| ! | TTGAACAGGAGGAGTATGAC+CGG | - | chr6.1:30989154-30989173 | MS.gene87215:CDS | 45.0% |
| !! | CTCGTCGTCGATTCATCTTA+AGG | - | chr6.1:30986964-30986983 | MS.gene87215:intron | 45.0% |
| !! | CTTGCCGAGGCTATTTCTAA+TGG | - | chr6.1:30989180-30989199 | MS.gene87215:CDS | 45.0% |
| !! | GGAGGGATTTGTTGTTGTTG+GGG | + | chr6.1:30986750-30986769 | None:intergenic | 45.0% |
| !! | GGATTTGTTGTTGTTGGGGA+AGG | + | chr6.1:30986746-30986765 | None:intergenic | 45.0% |
| !! | GGGATTTGTTGTAGGGAAGA+AGG | + | chr6.1:30986786-30986805 | None:intergenic | 45.0% |
| !! | GTGGAGGGATTTGTTGTTGT+TGG | + | chr6.1:30986752-30986771 | None:intergenic | 45.0% |
| !! | GTTGTGGAGGGATTTGTTGT+AGG | + | chr6.1:30986755-30986774 | None:intergenic | 45.0% |
| !!! | AAGGTGGGTTTTGTTGTGGA+GGG | + | chr6.1:30986767-30986786 | None:intergenic | 45.0% |
| !!! | GAAGAAGGTGGGTTTTGTTG+TGG | + | chr6.1:30986771-30986790 | None:intergenic | 45.0% |
| !!! | GGTGGGTTTTGTTGTTGTTG+GGG | + | chr6.1:30986831-30986850 | None:intergenic | 45.0% |
| !!! | GTGGTGGGTTTTGTTGTTGT+TGG | + | chr6.1:30986833-30986852 | None:intergenic | 45.0% |
| !! | AAATAATAACAAAATATTTA+AGG | + | chr6.1:30989136-30989155 | None:intergenic | 5.0% |
| AAGGGAGGATGCATTCACAC+TGG | - | chr6.1:30987524-30987543 | MS.gene87215:intron | 50.0% | |
| AAGGTCATATGAGGAGCAGC+TGG | - | chr6.1:30989482-30989501 | MS.gene87215:CDS | 50.0% | |
| AATTACCGCGGACAGATGGT+TGG | + | chr6.1:30988389-30988408 | None:intergenic | 50.0% | |
| AGAAAGCGGCCACATTGGAT+TGG | - | chr6.1:30987410-30987429 | MS.gene87215:intron | 50.0% | |
| AGACAAGAAAGCGGCCACAT+TGG | - | chr6.1:30987405-30987424 | MS.gene87215:intron | 50.0% | |
| AGGACCCTTCACCATGATTG+AGG | + | chr6.1:30989344-30989363 | None:intergenic | 50.0% | |
| ATAGGCTAGGAGGTTACGTC+GGG | - | chr6.1:30987651-30987670 | MS.gene87215:intron | 50.0% | |
| ATGATAGGTCGGAGGAAGGA+AGG | + | chr6.1:30986694-30986713 | None:intergenic | 50.0% | |
| ATGGCACCCTACCTCCTTAT+GGG | - | chr6.1:30986667-30986686 | MS.gene87215:CDS | 50.0% | |
| CCCGCCTATCTTTGGTGAAT+TGG | - | chr6.1:30987433-30987452 | MS.gene87215:intron | 50.0% | |
| CCTTCATCATGACACGTGAG+CGG | - | chr6.1:30988515-30988534 | MS.gene87215:CDS | 50.0% | |
| GAAAATGTGGTCGAAGAGGG+TGG | - | chr6.1:30986891-30986910 | MS.gene87215:intron | 50.0% | |
| GAAGGTCCCATAAGGAGGTA+GGG | + | chr6.1:30986676-30986695 | None:intergenic | 50.0% | |
| GATCTGATTGCTTCAGCAGC+CGG | + | chr6.1:30987095-30987114 | None:intergenic | 50.0% | |
| GGACCCTTCACCATGATTGA+GGG | + | chr6.1:30989343-30989362 | None:intergenic | 50.0% | |
| GGTAGATGAGGAGGATGATG+AGG | - | chr6.1:30989584-30989603 | MS.gene87215:CDS | 50.0% | |
| GGTGGTAAATGATAGGTCGG+AGG | + | chr6.1:30986702-30986721 | None:intergenic | 50.0% | |
| TAAAAGCGGCGCACTAGTGT+GGG | + | chr6.1:30989541-30989560 | None:intergenic | 50.0% | |
| TATGGCACCCTACCTCCTTA+TGG | - | chr6.1:30986666-30986685 | MS.gene87215:CDS | 50.0% | |
| TCCTCCTCATCTACCGGATA+AGG | + | chr6.1:30989579-30989598 | None:intergenic | 50.0% | |
| TCTGGTGAGGGAAGGAGTTA+GGG | + | chr6.1:30988039-30988058 | None:intergenic | 50.0% | |
| TGAATAAGCTCCCGCATCTC+TGG | + | chr6.1:30989387-30989406 | None:intergenic | 50.0% | |
| TGTCTCCTCAAACCGCATAC+GGG | + | chr6.1:30987390-30987409 | None:intergenic | 50.0% | |
| TTAAAAGCGGCGCACTAGTG+TGG | + | chr6.1:30989542-30989561 | None:intergenic | 50.0% | |
| TTGGCTGCTAACTACCGGAA+GGG | - | chr6.1:30989291-30989310 | MS.gene87215:CDS | 50.0% | |
| TTTAGGCAAGCTCAGGCTCA+AGG | - | chr6.1:30989510-30989529 | MS.gene87215:CDS | 50.0% | |
| TTTCTTGTTGGGGCTGTGGT+GGG | + | chr6.1:30986875-30986894 | None:intergenic | 50.0% | |
| ! | ACTGGAGGGCACATGTAAGT+GGG | + | chr6.1:30986633-30986652 | None:intergenic | 50.0% |
| ! | CAGAGCTGCTGCACGTTTTT+CGG | - | chr6.1:30987349-30987368 | MS.gene87215:intron | 50.0% |
| ! | GGTAGGGTGCCATAATATCC+AGG | + | chr6.1:30986660-30986679 | None:intergenic | 50.0% |
| ! | GTTGTTGTTGGGGAACAGGT+GGG | + | chr6.1:30986821-30986840 | None:intergenic | 50.0% |
| ! | GTTGTTGTTGGGGTTGTGGT+GGG | + | chr6.1:30986848-30986867 | None:intergenic | 50.0% |
| ! | TACTGGAGGGCACATGTAAG+TGG | + | chr6.1:30986634-30986653 | None:intergenic | 50.0% |
| ! | TGAGCCTTATCCGGTAGATG+AGG | - | chr6.1:30989572-30989591 | MS.gene87215:CDS | 50.0% |
| ! | TGTGGTGGGACTGAATATGG+TGG | + | chr6.1:30986720-30986739 | None:intergenic | 50.0% |
| ! | TGTTGTTGTTGGGGAACAGG+TGG | + | chr6.1:30986822-30986841 | None:intergenic | 50.0% |
| ! | TGTTGTTGTTGGGGTTGTGG+TGG | + | chr6.1:30986849-30986868 | None:intergenic | 50.0% |
| ! | TTTTCTTGTTGGGGCTGTGG+TGG | + | chr6.1:30986876-30986895 | None:intergenic | 50.0% |
| !! | GGTTAAGTATTGGGCGTCTG+AGG | - | chr6.1:30987454-30987473 | MS.gene87215:intron | 50.0% |
| !! | GTTGGGGAAGGTTTTGTGGT+GGG | + | chr6.1:30986734-30986753 | None:intergenic | 50.0% |
| !! | TGTTGGGGAAGGTTTTGTGG+TGG | + | chr6.1:30986735-30986754 | None:intergenic | 50.0% |
| !!! | ACAGGTGGGTTTTGTTGTGG+AGG | + | chr6.1:30986807-30986826 | None:intergenic | 50.0% |
| !!! | CAGGTGGGTTTTGTTGTGGA+GGG | + | chr6.1:30986806-30986825 | None:intergenic | 50.0% |
| !!! | GAAGGTGGGTTTTGTTGTGG+AGG | + | chr6.1:30986768-30986787 | None:intergenic | 50.0% |
| !!! | GGAACAGGTGGGTTTTGTTG+TGG | + | chr6.1:30986810-30986829 | None:intergenic | 50.0% |
| AAATAGCCTCGGCAAGCTGC+CGG | + | chr6.1:30989176-30989195 | None:intergenic | 55.0% | |
| AAGAGCCCGTATGCGGTTTG+AGG | - | chr6.1:30987382-30987401 | MS.gene87215:intron | 55.0% | |
| AATACTGCGACGAGCGTGCT+AGG | - | chr6.1:30987725-30987744 | MS.gene87215:intron | 55.0% | |
| AATGTGGTCGAAGAGGGTGG+TGG | - | chr6.1:30986894-30986913 | MS.gene87215:intron | 55.0% | |
| ACTGGTGGTTGCTGAGCGTA+TGG | - | chr6.1:30987542-30987561 | MS.gene87215:intron | 55.0% | |
| AGCAAAGAAGAACCGGGCGT+CGG | - | chr6.1:30987499-30987518 | MS.gene87215:intron | 55.0% | |
| AGGAGCAGCTGGCACAGTTT+AGG | - | chr6.1:30989493-30989512 | MS.gene87215:CDS | 55.0% | |
| ATAGGCGGGCCAATCCAATG+TGG | + | chr6.1:30987422-30987441 | None:intergenic | 55.0% | |
| ATGTGCCCTCCAGTACATCC+TGG | - | chr6.1:30986639-30986658 | MS.gene87215:CDS | 55.0% | |
| CCGCTCACGTGTCATGATGA+AGG | + | chr6.1:30988518-30988537 | None:intergenic | 55.0% | |
| CTCCATGCTCAGATCAGACG+CGG | + | chr6.1:30988643-30988662 | None:intergenic | 55.0% | |
| CTCTGGTGAGGGAAGGAGTT+AGG | + | chr6.1:30988040-30988059 | None:intergenic | 55.0% | |
| CTTCTAGCCAGGGTTCACCT+GGG | - | chr6.1:30986559-30986578 | MS.gene87215:CDS | 55.0% | |
| CTTGGCTGCTAACTACCGGA+AGG | - | chr6.1:30989290-30989309 | MS.gene87215:CDS | 55.0% | |
| GAAAGAGCAAGGGCAACAGC+AGG | - | chr6.1:30986433-30986452 | MS.gene87215:CDS | 55.0% | |
| GATTGCTTCAGCAGCCGGTT+TGG | + | chr6.1:30987090-30987109 | None:intergenic | 55.0% | |
| GCAGCAGATGGCAAGTCAAG+CGG | - | chr6.1:30989431-30989450 | MS.gene87215:CDS | 55.0% | |
| GCCTTATCCGGTAGATGAGG+AGG | - | chr6.1:30989575-30989594 | MS.gene87215:CDS | 55.0% | |
| GGAAGGAAGGTCCCATAAGG+AGG | + | chr6.1:30986681-30986700 | None:intergenic | 55.0% | |
| GGAAGGTCCCATAAGGAGGT+AGG | + | chr6.1:30986677-30986696 | None:intergenic | 55.0% | |
| GGAGGAAGGAAGGTCCCATA+AGG | + | chr6.1:30986684-30986703 | None:intergenic | 55.0% | |
| GGAGGATGCATTCACACTGG+TGG | - | chr6.1:30987527-30987546 | MS.gene87215:intron | 55.0% | |
| GGCACAGTTTAGGCAAGCTC+AGG | - | chr6.1:30989503-30989522 | MS.gene87215:CDS | 55.0% | |
| GGGCACATGTAAGTGGGATG+AGG | + | chr6.1:30986627-30986646 | None:intergenic | 55.0% | |
| GTTGGGGCCAGACCACAATT+CGG | + | chr6.1:30987866-30987885 | None:intergenic | 55.0% | |
| TAGCACGCTCGTCGCAGTAT+TGG | + | chr6.1:30987726-30987745 | None:intergenic | 55.0% | |
| TAGTGTACCTGCTCCTGCGA+CGG | - | chr6.1:30986593-30986612 | MS.gene87215:CDS | 55.0% | |
| TCTTCTAGCCAGGGTTCACC+TGG | - | chr6.1:30986558-30986577 | MS.gene87215:CDS | 55.0% | |
| TGCATCCAACCATCTGTCCG+CGG | - | chr6.1:30988381-30988400 | MS.gene87215:intron | 55.0% | |
| ! | AGGAGCAGGTACACTAGCCT+GGG | + | chr6.1:30986589-30986608 | None:intergenic | 55.0% |
| !! | AAGAACCGGGCGTCGGAAAA+GGG | - | chr6.1:30987506-30987525 | MS.gene87215:intron | 55.0% |
| !! | GCGCTGGTTTAGGCTCTTTC+AGG | - | chr6.1:30987181-30987200 | MS.gene87215:intron | 55.0% |
| !! | TGGATTGGCCCGCCTATCTT+TGG | - | chr6.1:30987425-30987444 | MS.gene87215:intron | 55.0% |
| AGCCGCGTCTGATCTGAGCA+TGG | - | chr6.1:30988638-30988657 | MS.gene87215:CDS | 60.0% | |
| CAGGAGCAGGTACACTAGCC+TGG | + | chr6.1:30986590-30986609 | None:intergenic | 60.0% | |
| CGCGTCTGATCTGAGCATGG+AGG | - | chr6.1:30988641-30988660 | MS.gene87215:CDS | 60.0% | |
| CTGAGCTGACGCCAGAGATG+CGG | - | chr6.1:30989373-30989392 | MS.gene87215:CDS | 60.0% | |
| GCAAGGGCAACAGCAGGAAG+CGG | - | chr6.1:30986439-30986458 | MS.gene87215:CDS | 60.0% | |
| TGAGCTGACGCCAGAGATGC+GGG | - | chr6.1:30989374-30989393 | MS.gene87215:CDS | 60.0% | |
| ! | AGCAGGTACACTAGCCTGGG+AGG | + | chr6.1:30986586-30986605 | None:intergenic | 60.0% |
| ! | ATCCTCCCTTTTCCGACGCC+CGG | + | chr6.1:30987514-30987533 | None:intergenic | 60.0% |
| ! | CTTAGTGGACGCAGCGACAG+AGG | - | chr6.1:30986473-30986492 | MS.gene87215:CDS | 60.0% |
| ! | TTGGGCGTCTGAGGCGTTCA+AGG | - | chr6.1:30987463-30987482 | MS.gene87215:intron | 60.0% |
| !! | ACGCTCGTCGCAGTATTGGC+CGG | + | chr6.1:30987722-30987741 | None:intergenic | 60.0% |
| !! | GAAGAACCGGGCGTCGGAAA+AGG | - | chr6.1:30987505-30987524 | MS.gene87215:intron | 60.0% |
| !! | GCTTCAGCAGCCGGTTTGGA+AGG | + | chr6.1:30987086-30987105 | None:intergenic | 60.0% |
| AAGCGGCGCACTAGTGTGGG+AGG | + | chr6.1:30989538-30989557 | None:intergenic | 65.0% | |
| AGCGGCGCACTAGTGTGGGA+GGG | + | chr6.1:30989537-30989556 | None:intergenic | 65.0% | |
| CGCATCTCTGGCGTCAGCTC+AGG | + | chr6.1:30989375-30989394 | None:intergenic | 65.0% | |
| GTATGACCGGCAGCTTGCCG+AGG | - | chr6.1:30989167-30989186 | MS.gene87215:CDS | 65.0% | |
| TGAGGAGCAGAAGCCGTCGC+AGG | + | chr6.1:30986609-30986628 | None:intergenic | 65.0% | |
| TGGCGTCAGCTCAGGCTGCT+GGG | + | chr6.1:30989367-30989386 | None:intergenic | 65.0% | |
| ! | ACACTAGCCTGGGAGGACCC+AGG | + | chr6.1:30986579-30986598 | None:intergenic | 65.0% |
| ! | CGAGCGTGCTAGGAGTGTGC+AGG | - | chr6.1:30987735-30987754 | MS.gene87215:intron | 65.0% |
| !! | AACCGGGCGTCGGAAAAGGG+AGG | - | chr6.1:30987509-30987528 | MS.gene87215:intron | 65.0% |
| !! | CGAAGAGGGTGGTGGAGAGC+TGG | - | chr6.1:30986902-30986921 | MS.gene87215:intron | 65.0% |
| CGTCAGCTCAGGCTGCTGGG+AGG | + | chr6.1:30989364-30989383 | None:intergenic | 70.0% | |
| CTGGCGTCAGCTCAGGCTGC+TGG | + | chr6.1:30989368-30989387 | None:intergenic | 70.0% | |
| GCAGAAGCCGTCGCAGGAGC+AGG | + | chr6.1:30986603-30986622 | None:intergenic | 70.0% | |
| GGGAGGACCCAGGTGAACCC+TGG | + | chr6.1:30986569-30986588 | None:intergenic | 70.0% | |
| GGGTTCACCTGGGTCCTCCC+AGG | - | chr6.1:30986569-30986588 | MS.gene87215:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 30986414 | 30989611 | 30986414 | ID=MS.gene87215 |
| chr6.1 | mRNA | 30986414 | 30989611 | 30986414 | ID=MS.gene87215.t1;Parent=MS.gene87215 |
| chr6.1 | exon | 30989025 | 30989611 | 30989025 | ID=MS.gene87215.t1.exon1;Parent=MS.gene87215.t1 |
| chr6.1 | CDS | 30989025 | 30989611 | 30989025 | ID=cds.MS.gene87215.t1;Parent=MS.gene87215.t1 |
| chr6.1 | exon | 30988823 | 30988949 | 30988823 | ID=MS.gene87215.t1.exon2;Parent=MS.gene87215.t1 |
| chr6.1 | CDS | 30988823 | 30988949 | 30988823 | ID=cds.MS.gene87215.t1;Parent=MS.gene87215.t1 |
| chr6.1 | exon | 30988629 | 30988732 | 30988629 | ID=MS.gene87215.t1.exon3;Parent=MS.gene87215.t1 |
| chr6.1 | CDS | 30988629 | 30988732 | 30988629 | ID=cds.MS.gene87215.t1;Parent=MS.gene87215.t1 |
| chr6.1 | exon | 30988462 | 30988540 | 30988462 | ID=MS.gene87215.t1.exon4;Parent=MS.gene87215.t1 |
| chr6.1 | CDS | 30988462 | 30988540 | 30988462 | ID=cds.MS.gene87215.t1;Parent=MS.gene87215.t1 |
| chr6.1 | exon | 30988269 | 30988370 | 30988269 | ID=MS.gene87215.t1.exon5;Parent=MS.gene87215.t1 |
| chr6.1 | CDS | 30988269 | 30988370 | 30988269 | ID=cds.MS.gene87215.t1;Parent=MS.gene87215.t1 |
| chr6.1 | exon | 30986414 | 30986863 | 30986414 | ID=MS.gene87215.t1.exon6;Parent=MS.gene87215.t1 |
| chr6.1 | CDS | 30986414 | 30986863 | 30986414 | ID=cds.MS.gene87215.t1;Parent=MS.gene87215.t1 |
| Gene Sequence |
| Protein sequence |
