AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87272

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87272.t1 MTR_2g082650 99.060 532 5 0 1 532 10 541 0.0 1101
MS.gene87272.t1 MTR_2g082650 99.272 412 3 0 121 532 1 412 0.0 857
MS.gene87272.t1 MTR_4g133570 67.481 532 105 6 1 532 1 464 0.0 684
MS.gene87272.t1 MTR_7g012370 54.095 525 234 3 1 519 1 524 0.0 598
MS.gene87272.t1 MTR_6g013840 52.542 531 250 2 1 530 1 530 0.0 581
MS.gene87272.t1 MTR_7g012370 52.360 445 205 3 1 439 1 444 8.70e-166 478
MS.gene87272.t1 MTR_3g452360 41.682 547 283 8 1 530 1 528 2.64e-142 421
MS.gene87272.t1 MTR_3g452360 48.072 389 189 2 145 530 1 379 8.09e-129 381
MS.gene87272.t1 MTR_2g027740 41.096 438 236 6 94 530 249 665 4.45e-115 355
MS.gene87272.t1 MTR_8g092000 40.865 416 222 5 115 530 187 578 1.26e-113 349
MS.gene87272.t1 MTR_3g107930 39.243 423 240 5 109 531 182 587 5.39e-109 337
MS.gene87272.t1 MTR_7g055600 42.118 425 226 6 106 530 28 432 6.45e-109 332
MS.gene87272.t1 MTR_7g057530 42.118 425 226 6 106 530 28 432 6.45e-109 332
MS.gene87272.t1 MTR_7g075840 41.587 416 224 5 115 530 266 662 7.11e-109 339
MS.gene87272.t1 MTR_2g015550 39.506 405 221 8 129 530 149 532 8.20e-109 335
MS.gene87272.t1 MTR_3g107930 39.243 423 240 5 109 531 259 664 5.02e-108 337
MS.gene87272.t1 MTR_6g016380 40.136 441 232 10 99 530 136 553 1.33e-105 327
MS.gene87272.t1 MTR_4g109890 38.532 436 232 8 100 528 126 532 3.62e-104 323
MS.gene87272.t1 MTR_8g033360 41.361 382 207 5 115 496 233 597 2.63e-100 318
MS.gene87272.t1 MTR_2g461670 37.269 432 245 8 101 530 182 589 3.93e-96 304
MS.gene87272.t1 MTR_7g096160 34.053 417 232 6 117 532 280 654 1.28e-84 275
MS.gene87272.t1 MTR_2g006790 35.309 405 214 9 129 530 149 508 1.35e-84 271
MS.gene87272.t1 MTR_1g070490 31.920 401 228 6 133 530 239 597 1.35e-64 221
MS.gene87272.t1 MTR_7g074680 30.093 432 255 9 112 532 210 605 1.42e-51 186
MS.gene87272.t1 MTR_7g074680 30.093 432 255 9 112 532 230 625 1.76e-51 186
MS.gene87272.t1 MTR_7g074680 30.324 432 254 9 112 532 230 625 2.33e-51 186
MS.gene87272.t1 MTR_7g074680 30.093 432 255 9 112 532 170 565 3.10e-51 184
MS.gene87272.t1 MTR_7g074680 30.324 432 254 9 112 532 250 645 3.68e-51 185
MS.gene87272.t1 MTR_7g074680 30.750 400 237 8 137 532 299 662 7.27e-51 185
MS.gene87272.t1 MTR_4g133942 39.764 254 110 7 283 530 116 332 4.95e-45 162
MS.gene87272.t1 MTR_4g118030 29.255 188 110 6 329 505 145 320 1.78e-23 102
MS.gene87272.t1 MTR_4g081360 61.111 72 12 1 461 532 3 58 7.28e-21 86.7
MS.gene87272.t1 MTR_3g092310 27.602 221 132 8 312 517 122 329 1.01e-20 94.0
MS.gene87272.t1 MTR_5g036580 30.151 199 121 8 329 517 166 356 1.82e-19 90.9
MS.gene87272.t1 MTR_3g111600 30.348 201 118 9 329 517 80 270 4.71e-19 87.8
MS.gene87272.t1 MTR_7g109210 29.949 197 123 9 329 517 159 348 1.74e-18 87.4
MS.gene87272.t1 MTR_7g094230 27.128 188 113 6 329 505 151 325 3.11e-18 86.7
MS.gene87272.t1 MTR_6g008900 28.889 225 139 10 304 517 143 357 5.15e-18 86.3
MS.gene87272.t1 MTR_4g071620 28.889 225 139 10 304 517 143 357 5.15e-18 86.3
MS.gene87272.t1 MTR_1g021855 30.151 199 122 8 329 517 165 356 1.12e-17 85.1
MS.gene87272.t1 MTR_8g078240 25.592 211 137 8 326 524 139 341 1.40e-15 78.6
MS.gene87272.t1 MTR_1g089820 27.128 188 113 6 329 505 154 328 5.17e-14 73.9
MS.gene87272.t1 MTR_5g059865 51.163 86 39 2 162 245 49 133 1.56e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87272.t1 AT5G54690 79.401 534 108 2 1 532 1 534 0.0 868
MS.gene87272.t1 AT5G15470 55.367 531 235 2 1 530 1 530 0.0 632
MS.gene87272.t1 AT3G01040 55.179 531 236 2 1 530 1 530 0.0 624
MS.gene87272.t1 AT3G01040 55.179 531 236 2 1 530 1 530 0.0 624
MS.gene87272.t1 AT3G01040 52.354 531 218 3 1 530 1 497 0.0 567
MS.gene87272.t1 AT3G58790 41.650 509 279 6 31 530 39 538 2.18e-131 393
MS.gene87272.t1 AT3G58790 45.813 406 209 3 130 530 7 406 8.09e-128 379
MS.gene87272.t1 AT5G47780 43.192 426 214 6 112 530 210 614 3.11e-118 362
MS.gene87272.t1 AT3G61130 41.587 416 223 5 115 530 276 671 2.16e-117 361
MS.gene87272.t1 AT3G25140 41.647 425 228 6 106 530 153 557 3.89e-113 347
MS.gene87272.t1 AT1G18580 38.928 429 242 6 100 528 126 534 1.25e-109 337
MS.gene87272.t1 AT3G02350 43.333 420 218 6 112 530 159 559 1.41e-107 333
MS.gene87272.t1 AT4G38270 40.976 410 221 6 125 530 286 678 1.04e-105 331
MS.gene87272.t1 AT4G38270 40.976 410 221 6 125 530 282 674 1.12e-105 331
MS.gene87272.t1 AT2G46480 39.120 432 246 4 99 530 124 538 2.46e-101 316
MS.gene87272.t1 AT2G46480 39.120 432 246 4 99 530 137 551 3.89e-101 316
MS.gene87272.t1 AT2G20810 40.295 407 217 9 129 530 150 535 6.95e-98 306
MS.gene87272.t1 AT2G46480 35.417 432 237 4 99 530 124 513 9.72e-87 277
MS.gene87272.t1 AT2G46480 35.417 432 237 4 99 530 137 526 1.36e-86 277
MS.gene87272.t1 AT1G06780 32.874 435 251 7 99 532 195 589 6.76e-80 261
MS.gene87272.t1 AT1G06780 32.874 435 251 7 99 532 208 602 9.05e-80 261
MS.gene87272.t1 AT2G30575 33.573 417 235 7 115 530 233 608 5.72e-79 259
MS.gene87272.t1 AT2G38650 32.326 430 239 10 112 530 229 617 9.70e-61 211
MS.gene87272.t1 AT2G38650 32.326 430 239 10 112 530 229 617 9.70e-61 211
MS.gene87272.t1 AT2G38650 33.036 336 174 9 112 436 229 524 2.83e-38 147
MS.gene87272.t1 AT3G28340 29.864 221 125 10 312 517 141 346 1.37e-20 94.0
MS.gene87272.t1 AT4G02130 30.612 196 123 7 329 517 150 339 1.59e-20 93.6
MS.gene87272.t1 AT4G02130 30.612 196 123 7 329 517 150 339 1.59e-20 93.6
MS.gene87272.t1 AT4G02130 30.612 196 123 7 329 517 150 339 1.59e-20 93.6
MS.gene87272.t1 AT3G06260 25.373 201 137 6 311 505 131 324 1.73e-20 93.6
MS.gene87272.t1 AT3G62660 29.592 196 125 7 329 517 164 353 2.26e-18 87.4
MS.gene87272.t1 AT1G70090 26.136 352 201 16 179 517 54 359 2.49e-18 87.4
MS.gene87272.t1 AT1G70090 26.136 352 201 16 179 517 54 359 2.49e-18 87.4
MS.gene87272.t1 AT1G02720 29.082 196 126 7 329 517 165 354 3.03e-18 87.0
MS.gene87272.t1 AT1G02720 29.082 196 126 7 329 517 165 354 3.03e-18 87.0
MS.gene87272.t1 AT1G13250 29.302 215 138 8 311 517 125 333 3.23e-16 80.5
MS.gene87272.t1 AT1G19300 28.358 201 122 9 329 517 150 340 6.22e-16 79.7
MS.gene87272.t1 AT1G24170 28.934 197 126 8 329 517 172 362 9.71e-16 79.7
MS.gene87272.t1 AT3G50760 27.053 207 140 7 326 524 133 336 2.34e-15 77.8

Find 125 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTAGGGCCAAGGATTT+TGG 0.132357 2.2:+14418242 MS.gene87272:CDS
TCCACGTTATAGATCCTTTC+TGG 0.192422 2.2:+14420144 MS.gene87272:CDS
ATATAGATACTCTTGGATTT+TGG 0.205827 2.2:-14418821 None:intergenic
TAACTGTTTACGACCTAATA+AGG 0.231203 2.2:+14419050 MS.gene87272:CDS
CGTCGAGGCGCCTTTCTTAT+AGG 0.234099 2.2:+14416919 MS.gene87272:CDS
AAAGTTTGGTATATCACTTC+TGG 0.235664 2.2:-14418396 None:intergenic
AATTATATTTGCAGGTTGTC+TGG 0.274163 2.2:+14418215 MS.gene87272:intron
ATGTGTATAACAACCTTATT+AGG 0.277373 2.2:-14419063 None:intergenic
TAAGAGATTACAGTTGATTC+AGG 0.287098 2.2:-14418273 None:intergenic
GAAGGTGAGGTCGCAGTTTA+GGG 0.291398 2.2:+14419236 MS.gene87272:CDS
AGAAGGTGAGGTCGCAGTTT+AGG 0.293050 2.2:+14419235 MS.gene87272:CDS
ACAAGTTTGTGATGTCAAAA+AGG 0.308600 2.2:+14419626 MS.gene87272:CDS
GTCCACAATGACCTTAGTTC+TGG 0.325187 2.2:-14420275 None:intergenic
CAATTGGTTCATCTAAAGTT+TGG 0.330150 2.2:-14418410 None:intergenic
AAGTTTAACTGCAAATGTTT+TGG 0.330421 2.2:-14418517 None:intergenic
ACAAACTTTAGAAGAGTTCA+TGG 0.335034 2.2:+14418467 MS.gene87272:CDS
ACCTAGTCCTTTGTTCCATA+AGG 0.339141 2.2:-14418795 None:intergenic
ATGATATGTATTGCTTATAT+TGG 0.339918 2.2:-14419761 None:intergenic
CTGTTATTAGGTAACCCTTA+TGG 0.345194 2.2:+14418780 MS.gene87272:intron
CCTTTGAAAACCAATCAAAA+TGG 0.349718 2.2:-14419176 None:intergenic
AGGCATGTTACTGTCCTTCC+AGG 0.350319 2.2:+14416861 MS.gene87272:CDS
TTCTCCATTGCTTCTAAAAC+AGG 0.359856 2.2:-14419207 None:intergenic
TGCAGTTAAACTTAGAGAAA+TGG 0.369361 2.2:+14418527 MS.gene87272:CDS
TATCTGAGGCTAAAACAAAA+TGG 0.373236 2.2:-14418987 None:intergenic
TTCTGGCATATGCTTGGATT+GGG 0.375631 2.2:+14420161 MS.gene87272:CDS
AAGGCGTGCTGCTGCGTTGT+TGG 0.378821 2.2:-14418914 None:intergenic
ATGAACTCTTCTAAAGTTTG+TGG 0.385053 2.2:-14418465 None:intergenic
CCTAGTCCTTTGTTCCATAA+GGG 0.386334 2.2:-14418794 None:intergenic
GGCTAAAACAAAATGGTAAT+AGG 0.387821 2.2:-14418980 None:intergenic
TTTCTGGCATATGCTTGGAT+TGG 0.395599 2.2:+14420160 MS.gene87272:CDS
TATGCTTGGATTGGGATATC+AGG 0.401194 2.2:+14420169 MS.gene87272:CDS
TCAATCACAGCAGGTGATAA+AGG 0.405589 2.2:-14419138 None:intergenic
TTTAGTTCATCATTGCCAAT+TGG 0.409872 2.2:-14418426 None:intergenic
CCTGGATTGATAGCATTTCA+TGG 0.413843 2.2:+14420116 MS.gene87272:CDS
TCAAGACAATGAAGTTGTTT+CGG 0.419494 2.2:-14418868 None:intergenic
ACAGCTGTGGATGGCATTGA+TGG 0.427978 2.2:+14416999 MS.gene87272:CDS
AACGAATGTGCTTGGGCCTA+CGG 0.428513 2.2:+14419703 MS.gene87272:CDS
CTTATTATCCCATGCAGGCT+TGG 0.429889 2.2:+14419103 MS.gene87272:CDS
TTTATCACCTGCTGTGATTG+AGG 0.440648 2.2:+14419140 MS.gene87272:CDS
GATCCTTTCTGGCATATGCT+TGG 0.446300 2.2:+14420155 MS.gene87272:CDS
AGATAATGTGCTTGCTGCCT+CGG 0.449906 2.2:+14419005 MS.gene87272:CDS
AGAGTTCATGGTTAAAATGA+AGG 0.450820 2.2:+14418479 MS.gene87272:CDS
CAAACTTTAGATGAACCAAT+TGG 0.453888 2.2:+14418411 MS.gene87272:CDS
GCTTTGCCCTGCCATTGAAA+TGG 0.454180 2.2:-14420232 None:intergenic
TCAATCCCAACGAATGTGCT+TGG 0.455578 2.2:+14419695 MS.gene87272:CDS
AATTGGCAATGATGAACTAA+AGG 0.456766 2.2:+14418428 MS.gene87272:CDS
TTAAATCAGACCTGAGTTTG+TGG 0.457853 2.2:+14420075 MS.gene87272:CDS
GTGTCATCCATTTCAATGGC+AGG 0.458742 2.2:+14420225 MS.gene87272:CDS
AAGTTTGGTATATCACTTCT+GGG 0.462799 2.2:-14418395 None:intergenic
TAAGCAATACATATCATCAC+TGG 0.462837 2.2:+14419767 MS.gene87272:CDS
GCATGGGATAATAAGTCTTC+CGG 0.467541 2.2:-14419095 None:intergenic
TGCATATATCTCCAAGTTTG+AGG 0.468657 2.2:+14416841 MS.gene87272:CDS
AACTCTTTAAGTCCTTTGCC+TGG 0.474489 2.2:-14416879 None:intergenic
ACCTGAGTTTGTGGCAGCTA+GGG 0.474996 2.2:+14420084 MS.gene87272:CDS
CAATCCCAACGAATGTGCTT+GGG 0.478614 2.2:+14419696 MS.gene87272:CDS
ATTATATTTGCAGGTTGTCT+GGG 0.486059 2.2:+14418216 MS.gene87272:intron
ACAGTAACATGCCTCAAACT+TGG 0.488081 2.2:-14416852 None:intergenic
TAGGCCCAAGCACATTCGTT+GGG 0.491286 2.2:-14419700 None:intergenic
CTTTAAGTCCTTTGCCTGGA+AGG 0.491497 2.2:-14416875 None:intergenic
ATTCAGTGATGAACCACGTT+CGG 0.493068 2.2:+14419343 MS.gene87272:CDS
ATTGGCAATGATGAACTAAA+GGG 0.496348 2.2:+14418429 MS.gene87272:CDS
GCAGTTTAGGGGAGGTTCAT+CGG 0.501375 2.2:+14419248 MS.gene87272:CDS
CATGGCGATATAGATACTCT+TGG 0.502065 2.2:-14418828 None:intergenic
AAGACCACCTTGTTAAGACT+TGG 0.504189 2.2:-14419502 None:intergenic
GACATGAATGGAAAAGTGAA+TGG 0.504634 2.2:+14419577 MS.gene87272:CDS
CTGTGGGACATTGACATGAA+TGG 0.510723 2.2:+14419565 MS.gene87272:CDS
ACCTGCTGTGATTGAGGTCA+AGG 0.515480 2.2:+14419146 MS.gene87272:CDS
CAATGAGAACCAAGCCTGCA+TGG 0.521244 2.2:-14419112 None:intergenic
TAGGAATTGTCAACAAGGGC+AGG 0.527659 2.2:-14418961 None:intergenic
CCATGAAATGCTATCAATCC+AGG 0.531538 2.2:-14420116 None:intergenic
ATATCATCACTGGGTTGCGC+AGG 0.531838 2.2:+14419777 MS.gene87272:CDS
TTGATTTGGAGGCTTGGAGG+AGG 0.533922 2.2:+14419737 MS.gene87272:CDS
TCCCTAGCTGCCACAAACTC+AGG 0.537117 2.2:-14420085 None:intergenic
GCTGGTGTCATCCATTTCAA+TGG 0.546735 2.2:+14420221 MS.gene87272:CDS
GACCTGAGTTTGTGGCAGCT+AGG 0.547386 2.2:+14420083 MS.gene87272:CDS
AGAAGAGCATCCTATAAGAA+AGG 0.547606 2.2:-14416929 None:intergenic
GTATGCTGCTTGATGCTACA+TGG 0.547890 2.2:-14418846 None:intergenic
GTAGGCCCAAGCACATTCGT+TGG 0.549124 2.2:-14419701 None:intergenic
AACTGATCTTACACCTCTGT+GGG 0.552088 2.2:+14419549 MS.gene87272:CDS
CAGCTAGGGACATTACCTCC+TGG 0.553175 2.2:+14420098 MS.gene87272:CDS
TTCATCACTGAATTATACTT+CGG 0.553891 2.2:-14419333 None:intergenic
AGCAATGGAGAAAGATCAGA+AGG 0.555930 2.2:+14419218 MS.gene87272:CDS
TGTTATTGCAGCAAAACTAC+AGG 0.556038 2.2:+14419302 MS.gene87272:CDS
GGTCGTCTACCCAAAATCCT+TGG 0.557130 2.2:-14418252 None:intergenic
GCCTTGACCTCAATCACAGC+AGG 0.559932 2.2:-14419147 None:intergenic
CAAAACAAGTGCTCTACCAT+AGG 0.561432 2.2:+14417023 MS.gene87272:CDS
TTCATGGTTAAAATGAAGGA+AGG 0.563822 2.2:+14418483 MS.gene87272:CDS
ATGGTTAAAATGAAGGAAGG+TGG 0.565029 2.2:+14418486 MS.gene87272:CDS
AATCCAAGCATATGCCAGAA+AGG 0.569673 2.2:-14420158 None:intergenic
GTTACTGTCCTTCCAGGCAA+AGG 0.576045 2.2:+14416867 MS.gene87272:CDS
GAAGACTTATTATCCCATGC+AGG 0.581237 2.2:+14419098 MS.gene87272:CDS
TTCCAGAACTAAGGTCATTG+TGG 0.590238 2.2:+14420273 MS.gene87272:CDS
GTTGACGATGTTGAGAATGC+TGG 0.595078 2.2:+14420203 MS.gene87272:CDS
AATGAGAACCAAGCCTGCAT+GGG 0.602294 2.2:-14419111 None:intergenic
TATGGAACAAAGGACTAGGT+TGG 0.602971 2.2:+14418798 MS.gene87272:CDS
CCCTTATGGAACAAAGGACT+AGG 0.608232 2.2:+14418794 MS.gene87272:CDS
TGTCATCCATTTCAATGGCA+GGG 0.612684 2.2:+14420226 MS.gene87272:CDS
AGGTAACCCTTATGGAACAA+AGG 0.619724 2.2:+14418788 MS.gene87272:intron
TCAATGGCAGGGCAAAGCCA+TGG 0.623067 2.2:+14420237 MS.gene87272:CDS
GTTCCGCAGACGGTAGCTGA+AGG 0.623605 2.2:-14418933 None:intergenic
GTTGTTTCCAAGTCTTAACA+AGG 0.625853 2.2:+14419495 MS.gene87272:intron
AAACTGATCTTACACCTCTG+TGG 0.626571 2.2:+14419548 MS.gene87272:CDS
ACGCCTTCAGCTACCGTCTG+CGG 0.629379 2.2:+14418930 MS.gene87272:CDS
GCAATGATGAACTAAAGGGA+AGG 0.629505 2.2:+14418433 MS.gene87272:CDS
GCAGGAACTAGTTCCGCAGA+CGG 0.630003 2.2:-14418943 None:intergenic
CGGGTAGATGTATCCGAACG+TGG 0.633258 2.2:-14419356 None:intergenic
GTGAGGTCGCAGTTTAGGGG+AGG 0.635528 2.2:+14419240 MS.gene87272:CDS
GGAGCAGTGGAAACATGCAA+TGG 0.639468 2.2:+14419598 MS.gene87272:CDS
GGCAGCAAGCACATTATCTG+AGG 0.641548 2.2:-14419001 None:intergenic
GTTTCCAAGTCTTAACAAGG+TGG 0.642127 2.2:+14419498 MS.gene87272:CDS
GGAAAAGCTATGTCTAGCCA+TGG 0.645591 2.2:-14420254 None:intergenic
TGGAAAAGTGAATGGAGCAG+TGG 0.647140 2.2:+14419585 MS.gene87272:CDS
GGTAATAGGAATTGTCAACA+AGG 0.647228 2.2:-14418966 None:intergenic
AAGCAATACATATCATCACT+GGG 0.652205 2.2:+14419768 MS.gene87272:CDS
TGGAGAAAGATCAGAAGGTG+AGG 0.652916 2.2:+14419223 MS.gene87272:CDS
TTATACACATAATTACAGAC+CGG 0.653156 2.2:+14419076 MS.gene87272:CDS
GTAATAGGAATTGTCAACAA+GGG 0.660966 2.2:-14418965 None:intergenic
AAGGTGAGGTCGCAGTTTAG+GGG 0.680449 2.2:+14419237 MS.gene87272:CDS
GCCAGAAAGGATCTATAACG+TGG 0.683226 2.2:-14420145 None:intergenic
TCAAAGTGAAAGTTGCGTCG+AGG 0.683701 2.2:+14416904 MS.gene87272:CDS
GTATCACAATGTCATCGTCG+AGG 0.702865 2.2:-14419525 None:intergenic
GAGTGATGTTGCAACAACCG+AGG 0.712252 2.2:-14419022 None:intergenic
TGAAATGCTATCAATCCAGG+AGG 0.724414 2.2:-14420113 None:intergenic
CGTTCGGATACATCTACCCG+AGG 0.733629 2.2:+14419359 MS.gene87272:CDS
TTCATGTCAATGTCCCACAG+AGG 0.769997 2.2:-14419562 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATGAAATTTTTTATTCTA+TGG - chr2.2:14417833-14417852 None:intergenic 10.0%
!! ACTGTTAAAATAACTTATAA+TGG - chr2.2:14418021-14418040 None:intergenic 15.0%
!! TATTTGTCTTTATTGTATTA+TGG - chr2.2:14419975-14419994 None:intergenic 15.0%
!!! AATGATTCATATTTTAAACT+CGG + chr2.2:14417158-14417177 MS.gene87272:intron 15.0%
!!! AATTTAGATCTATTTTCATA+TGG + chr2.2:14418119-14418138 MS.gene87272:intron 15.0%
!!! CAATTATTTTGATTTTCTAT+TGG + chr2.2:14418341-14418360 MS.gene87272:intron 15.0%
!!! TGAAATTTTTAGATATTAGA+GGG - chr2.2:14419678-14419697 None:intergenic 15.0%
!!! TTGAAATTTTTAGATATTAG+AGG - chr2.2:14419679-14419698 None:intergenic 15.0%
!! AAGATAATTCATTATATGCA+AGG - chr2.2:14417877-14417896 None:intergenic 20.0%
!! ATGATAAATGAACTGTTATT+AGG + chr2.2:14418768-14418787 MS.gene87272:intron 20.0%
!! ATGATATGTATTGCTTATAT+TGG - chr2.2:14419764-14419783 None:intergenic 20.0%
!! CAAATCAATAAAAATGTTAC+CGG + chr2.2:14417568-14417587 MS.gene87272:intron 20.0%
!! CACTAGAATTATTTCAAATT+TGG - chr2.2:14418712-14418731 None:intergenic 20.0%
!! TAACTTCTAATTATATTTGC+AGG + chr2.2:14418207-14418226 MS.gene87272:intron 20.0%
!! TTTATTGTATTATGGTAGAA+GGG - chr2.2:14419967-14419986 None:intergenic 20.0%
!!! AACTTGTCTGTATTTTTATA+TGG + chr2.2:14418045-14418064 MS.gene87272:intron 20.0%
!!! AAGATTTTAAAATCAAAAGC+CGG - chr2.2:14417590-14417609 None:intergenic 20.0%
!!! ATAGTAATTATGTCACATTT+TGG + chr2.2:14417382-14417401 MS.gene87272:intron 20.0%
!!! CATTTTTATTGATTTGTTAG+AGG - chr2.2:14417564-14417583 None:intergenic 20.0%
!!! GATGATTCATATTTTAAACT+CGG + chr2.2:14417288-14417307 MS.gene87272:intron 20.0%
!!! TTATTTTGATTTTCTATTGG+TGG + chr2.2:14418344-14418363 MS.gene87272:intron 20.0%
! ACAATTAGAATAGTTACTGT+TGG + chr2.2:14417796-14417815 MS.gene87272:intron 25.0%
! ACTGTAAAATTTCAATCCAA+CGG - chr2.2:14418624-14418643 None:intergenic 25.0%
! AGTGCACAAAAACATTTATT+TGG - chr2.2:14419441-14419460 None:intergenic 25.0%
! ATCATTTGATCTTCAATCAA+TGG + chr2.2:14417343-14417362 MS.gene87272:intron 25.0%
! ATGTGTATAACAACCTTATT+AGG - chr2.2:14419066-14419085 None:intergenic 25.0%
! CTTTATTGTATTATGGTAGA+AGG - chr2.2:14419968-14419987 None:intergenic 25.0%
! GTATTACATTCTACAGAAAA+GGG + chr2.2:14419807-14419826 MS.gene87272:intron 25.0%
! TGTATTACATTCTACAGAAA+AGG + chr2.2:14419806-14419825 MS.gene87272:intron 25.0%
! TTAAGTCTTAGCTTCATTAT+AGG - chr2.2:14418101-14418120 None:intergenic 25.0%
! TTATACACATAATTACAGAC+CGG + chr2.2:14419076-14419095 MS.gene87272:CDS 25.0%
! TTATTGTATTATGGTAGAAG+GGG - chr2.2:14419966-14419985 None:intergenic 25.0%
! TTCATCACTGAATTATACTT+CGG - chr2.2:14419336-14419355 None:intergenic 25.0%
!! AAGTTTAACTGCAAATGTTT+TGG - chr2.2:14418520-14418539 None:intergenic 25.0%
!! ATATAGATACTCTTGGATTT+TGG - chr2.2:14418824-14418843 None:intergenic 25.0%
!!! AAATGACATGACTTTTTCAT+AGG + chr2.2:14418371-14418390 MS.gene87272:intron 25.0%
!!! AAGCATGTTATTTTTTGCAA+AGG + chr2.2:14417493-14417512 MS.gene87272:intron 25.0%
!!! ATTTTGATTGGTTTTCAAAG+GGG + chr2.2:14419178-14419197 MS.gene87272:CDS 25.0%
!!! CATTTTGATTGGTTTTCAAA+GGG + chr2.2:14419177-14419196 MS.gene87272:CDS 25.0%
!!! TTTATTGATTTGTTAGAGGT+TGG - chr2.2:14417560-14417579 None:intergenic 25.0%
AAAGTTTGGTATATCACTTC+TGG - chr2.2:14418399-14418418 None:intergenic 30.0%
AACATAAAGTCCAGAATTTG+AGG - chr2.2:14417948-14417967 None:intergenic 30.0%
AAGCAATACATATCATCACT+GGG + chr2.2:14419768-14419787 MS.gene87272:CDS 30.0%
AAGTTTGGTATATCACTTCT+GGG - chr2.2:14418398-14418417 None:intergenic 30.0%
AATTATATTTGCAGGTTGTC+TGG + chr2.2:14418215-14418234 MS.gene87272:intron 30.0%
AATTGGCAATGATGAACTAA+AGG + chr2.2:14418428-14418447 MS.gene87272:CDS 30.0%
ACAAGTTTGTGATGTCAAAA+AGG + chr2.2:14419626-14419645 MS.gene87272:CDS 30.0%
AGAGTTCATGGTTAAAATGA+AGG + chr2.2:14418479-14418498 MS.gene87272:CDS 30.0%
ATGTAGGAAATAGATTCCTT+AGG - chr2.2:14417409-14417428 None:intergenic 30.0%
ATTATATTTGCAGGTTGTCT+GGG + chr2.2:14418216-14418235 MS.gene87272:intron 30.0%
ATTGGCAATGATGAACTAAA+GGG + chr2.2:14418429-14418448 MS.gene87272:CDS 30.0%
CAAACTTTAGATGAACCAAT+TGG + chr2.2:14418411-14418430 MS.gene87272:CDS 30.0%
GGCTAAAACAAAATGGTAAT+AGG - chr2.2:14418983-14419002 None:intergenic 30.0%
GTAATAGGAATTGTCAACAA+GGG - chr2.2:14418968-14418987 None:intergenic 30.0%
GTTGTCTGGGAAAAAAATTA+GGG + chr2.2:14418229-14418248 MS.gene87272:CDS 30.0%
TAACTGTTTACGACCTAATA+AGG + chr2.2:14419050-14419069 MS.gene87272:CDS 30.0%
TAAGCAATACATATCATCAC+TGG + chr2.2:14419767-14419786 MS.gene87272:CDS 30.0%
TCAAGACAATGAAGTTGTTT+CGG - chr2.2:14418871-14418890 None:intergenic 30.0%
TGCAGTTAAACTTAGAGAAA+TGG + chr2.2:14418527-14418546 MS.gene87272:CDS 30.0%
TGTAGGAAATAGATTCCTTA+GGG - chr2.2:14417408-14417427 None:intergenic 30.0%
TTCATGGTTAAAATGAAGGA+AGG + chr2.2:14418483-14418502 MS.gene87272:CDS 30.0%
! ACAAACTTTAGAAGAGTTCA+TGG + chr2.2:14418467-14418486 MS.gene87272:CDS 30.0%
! AGTTTTGCTGCAATAACATT+TGG - chr2.2:14419300-14419319 None:intergenic 30.0%
! CAATTGGTTCATCTAAAGTT+TGG - chr2.2:14418413-14418432 None:intergenic 30.0%
! CCTTTGAAAACCAATCAAAA+TGG - chr2.2:14419179-14419198 None:intergenic 30.0%
! TAAGAGATTACAGTTGATTC+AGG - chr2.2:14418276-14418295 None:intergenic 30.0%
! TATCTGAGGCTAAAACAAAA+TGG - chr2.2:14418990-14419009 None:intergenic 30.0%
! TTTAGTTCATCATTGCCAAT+TGG - chr2.2:14418429-14418448 None:intergenic 30.0%
! TTTGAGACTTCAACTTGAAA+AGG - chr2.2:14418746-14418765 None:intergenic 30.0%
! TTTTACAGTTCTCAATCCAA+CGG + chr2.2:14418635-14418654 MS.gene87272:intron 30.0%
!! ATGAACTCTTCTAAAGTTTG+TGG - chr2.2:14418468-14418487 None:intergenic 30.0%
!! ATTTAACTTGCCTCAAATTC+TGG + chr2.2:14417935-14417954 MS.gene87272:intron 30.0%
!! CTTATGAGCTATCACTTTTA+TGG - chr2.2:14420016-14420035 None:intergenic 30.0%
!!! CATGAACATTTTTGATTTGG+AGG + chr2.2:14419726-14419745 MS.gene87272:CDS 30.0%
!!! CCATTTTGATTGGTTTTCAA+AGG + chr2.2:14419176-14419195 MS.gene87272:CDS 30.0%
AAGCGAGATATTGTGACTAA+AGG - chr2.2:14417109-14417128 None:intergenic 35.0%
AATTCTAGTGGTCAACACAT+CGG - chr2.2:14418664-14418683 None:intergenic 35.0%
ACCAAGCTCTTTCAAACAAA+AGG - chr2.2:14419880-14419899 None:intergenic 35.0%
ACCAATAACACGAATTCTAG+TGG - chr2.2:14418676-14418695 None:intergenic 35.0%
ACCACTAGAATTCGTGTTAT+TGG + chr2.2:14418672-14418691 MS.gene87272:intron 35.0%
ATCAAAAATGTTCATGCCGT+AGG - chr2.2:14419722-14419741 None:intergenic 35.0%
ATGGTTAAAATGAAGGAAGG+TGG + chr2.2:14418486-14418505 MS.gene87272:CDS 35.0%
CTGTTATTAGGTAACCCTTA+TGG + chr2.2:14418780-14418799 MS.gene87272:intron 35.0%
GACATGAATGGAAAAGTGAA+TGG + chr2.2:14419577-14419596 MS.gene87272:CDS 35.0%
GGTAATAGGAATTGTCAACA+AGG - chr2.2:14418969-14418988 None:intergenic 35.0%
GGTTGTCTGGGAAAAAAATT+AGG + chr2.2:14418228-14418247 MS.gene87272:intron 35.0%
TCTGTTATTACAGATTCACC+TGG - chr2.2:14417695-14417714 None:intergenic 35.0%
TGAGTGTAACTAGATACTGA+CGG + chr2.2:14419841-14419860 MS.gene87272:intron 35.0%
TGATTACGCAGTTAGAAAGA+AGG + chr2.2:14417242-14417261 MS.gene87272:intron 35.0%
TGCATATATCTCCAAGTTTG+AGG + chr2.2:14416841-14416860 MS.gene87272:CDS 35.0%
TGTTATTGCAGCAAAACTAC+AGG + chr2.2:14419302-14419321 MS.gene87272:CDS 35.0%
TTAAATCAGACCTGAGTTTG+TGG + chr2.2:14420075-14420094 MS.gene87272:CDS 35.0%
TTTCAAATTTGGATTCCGTG+CGG - chr2.2:14418701-14418720 None:intergenic 35.0%
! AAAATTAGGGCCAAGGATTT+TGG + chr2.2:14418242-14418261 MS.gene87272:CDS 35.0%
! AAATTAGGGCCAAGGATTTT+GGG + chr2.2:14418243-14418262 MS.gene87272:CDS 35.0%
! ACATAGCTTTTCCAGAACTA+AGG + chr2.2:14420264-14420283 MS.gene87272:CDS 35.0%
! CTCTTTCAAACAAAAGGCAT+TGG - chr2.2:14419874-14419893 None:intergenic 35.0%
! GTTGTTTCCAAGTCTTAACA+AGG + chr2.2:14419495-14419514 MS.gene87272:intron 35.0%
!! AGAAGAGCATCCTATAAGAA+AGG - chr2.2:14416932-14416951 None:intergenic 35.0%
!! CGGCATGAACATTTTTGATT+TGG + chr2.2:14419723-14419742 MS.gene87272:CDS 35.0%
!! TGTTCTTCACTTTTCTTCTG+AGG + chr2.2:14416961-14416980 MS.gene87272:CDS 35.0%
!! TTCTCCATTGCTTCTAAAAC+AGG - chr2.2:14419210-14419229 None:intergenic 35.0%
!!! ACATTTTTGATTTGGAGGCT+TGG + chr2.2:14419731-14419750 MS.gene87272:CDS 35.0%
!!! TGTGTTTGTTTTAACAGCTG+TGG + chr2.2:14416986-14417005 MS.gene87272:CDS 35.0%
!!! TTTGTTTTAACAGCTGTGGA+TGG + chr2.2:14416990-14417009 MS.gene87272:CDS 35.0%
AAACTGATCTTACACCTCTG+TGG + chr2.2:14419548-14419567 MS.gene87272:CDS 40.0%
AACCAAAACGTGACGAAGTT+TGG - chr2.2:14418149-14418168 None:intergenic 40.0%
AACTCTTTAAGTCCTTTGCC+TGG - chr2.2:14416882-14416901 None:intergenic 40.0%
AACTGATCTTACACCTCTGT+GGG + chr2.2:14419549-14419568 MS.gene87272:CDS 40.0%
AAGACCACCTTGTTAAGACT+TGG - chr2.2:14419505-14419524 None:intergenic 40.0%
AAGCATGAACACATGTGTGA+AGG + chr2.2:14417441-14417460 MS.gene87272:intron 40.0%
AATCCAAGCATATGCCAGAA+AGG - chr2.2:14420161-14420180 None:intergenic 40.0%
ACAGTAACATGCCTCAAACT+TGG - chr2.2:14416855-14416874 None:intergenic 40.0%
ACCAAAACGTGACGAAGTTT+GGG - chr2.2:14418148-14418167 None:intergenic 40.0%
ACCTAGTCCTTTGTTCCATA+AGG - chr2.2:14418798-14418817 None:intergenic 40.0%
AGCAATGGAGAAAGATCAGA+AGG + chr2.2:14419218-14419237 MS.gene87272:CDS 40.0%
AGGTAACCCTTATGGAACAA+AGG + chr2.2:14418788-14418807 MS.gene87272:intron 40.0%
ATACATCTACCCGAGGTAAA+AGG + chr2.2:14419366-14419385 MS.gene87272:intron 40.0%
ATTCAGTGATGAACCACGTT+CGG + chr2.2:14419343-14419362 MS.gene87272:CDS 40.0%
CAAAACAAGTGCTCTACCAT+AGG + chr2.2:14417023-14417042 MS.gene87272:CDS 40.0%
CAACTTCAATTGTTGTGCCA+AGG + chr2.2:14419938-14419957 MS.gene87272:intron 40.0%
CATGGCGATATAGATACTCT+TGG - chr2.2:14418831-14418850 None:intergenic 40.0%
CCATGAAATGCTATCAATCC+AGG - chr2.2:14420119-14420138 None:intergenic 40.0%
CCTAGTCCTTTGTTCCATAA+GGG - chr2.2:14418797-14418816 None:intergenic 40.0%
GAAGACTTATTATCCCATGC+AGG + chr2.2:14419098-14419117 MS.gene87272:CDS 40.0%
GCAATGATGAACTAAAGGGA+AGG + chr2.2:14418433-14418452 MS.gene87272:CDS 40.0%
GCATGGGATAATAAGTCTTC+CGG - chr2.2:14419098-14419117 None:intergenic 40.0%
GTTTCCAAGTCTTAACAAGG+TGG + chr2.2:14419498-14419517 MS.gene87272:CDS 40.0%
TACATCTACCCGAGGTAAAA+GGG + chr2.2:14419367-14419386 MS.gene87272:intron 40.0%
TATGGAACAAAGGACTAGGT+TGG + chr2.2:14418798-14418817 MS.gene87272:CDS 40.0%
TCAATCACAGCAGGTGATAA+AGG - chr2.2:14419141-14419160 None:intergenic 40.0%
TCCACGTTATAGATCCTTTC+TGG + chr2.2:14420144-14420163 MS.gene87272:CDS 40.0%
TGAAATGCTATCAATCCAGG+AGG - chr2.2:14420116-14420135 None:intergenic 40.0%
TGGGAAAAAAATTAGGGCCA+AGG + chr2.2:14418235-14418254 MS.gene87272:CDS 40.0%
TGTCATCCATTTCAATGGCA+GGG + chr2.2:14420226-14420245 MS.gene87272:CDS 40.0%
TTCCAGAACTAAGGTCATTG+TGG + chr2.2:14420273-14420292 MS.gene87272:CDS 40.0%
TTCTGGCATATGCTTGGATT+GGG + chr2.2:14420161-14420180 MS.gene87272:CDS 40.0%
TTTATCACCTGCTGTGATTG+AGG + chr2.2:14419140-14419159 MS.gene87272:CDS 40.0%
! CCTGGATTGATAGCATTTCA+TGG + chr2.2:14420116-14420135 MS.gene87272:CDS 40.0%
! TATGCTTGGATTGGGATATC+AGG + chr2.2:14420169-14420188 MS.gene87272:CDS 40.0%
! TTTCTGGCATATGCTTGGAT+TGG + chr2.2:14420160-14420179 MS.gene87272:CDS 40.0%
!! AGGCATTGCACCATTTTGAT+TGG + chr2.2:14419166-14419185 MS.gene87272:CDS 40.0%
!! GCCTTTTGTTTGAAAGAGCT+TGG + chr2.2:14419876-14419895 MS.gene87272:intron 40.0%
!! TATGTCACATTTTGGCCCTA+AGG + chr2.2:14417390-14417409 MS.gene87272:intron 40.0%
!!! GGTACCTGTTTTAGAAGCAA+TGG + chr2.2:14419203-14419222 MS.gene87272:CDS 40.0%
!!! TGATTGGTTTTCAAAGGGGA+AGG + chr2.2:14419182-14419201 MS.gene87272:CDS 40.0%
!!! TTTTTGATTTGGAGGCTTGG+AGG + chr2.2:14419734-14419753 MS.gene87272:CDS 40.0%
AATGAGAACCAAGCCTGCAT+GGG - chr2.2:14419114-14419133 None:intergenic 45.0%
ATCAGCACATTTGTGACCGT+TGG + chr2.2:14418605-14418624 MS.gene87272:intron 45.0%
CAATCCCAACGAATGTGCTT+GGG + chr2.2:14419696-14419715 MS.gene87272:CDS 45.0%
CACATGTGTGAAGGTGGATA+AGG + chr2.2:14417450-14417469 MS.gene87272:intron 45.0%
CATGAACACATGTGTGAAGG+TGG + chr2.2:14417444-14417463 MS.gene87272:intron 45.0%
CCCTTATGGAACAAAGGACT+AGG + chr2.2:14418794-14418813 MS.gene87272:CDS 45.0%
CGTGTGTGAGAGAGAAAAGA+GGG - chr2.2:14417055-14417074 None:intergenic 45.0%
CTGTGGGACATTGACATGAA+TGG + chr2.2:14419565-14419584 MS.gene87272:CDS 45.0%
CTTATTATCCCATGCAGGCT+TGG + chr2.2:14419103-14419122 MS.gene87272:CDS 45.0%
CTTTAAGTCCTTTGCCTGGA+AGG - chr2.2:14416878-14416897 None:intergenic 45.0%
GCCAGAAAGGATCTATAACG+TGG - chr2.2:14420148-14420167 None:intergenic 45.0%
GCTTGTGACTCTGTCTATGT+AGG - chr2.2:14417425-14417444 None:intergenic 45.0%
GGAAAAGCTATGTCTAGCCA+TGG - chr2.2:14420257-14420276 None:intergenic 45.0%
GTATCACAATGTCATCGTCG+AGG - chr2.2:14419528-14419547 None:intergenic 45.0%
GTCCACAATGACCTTAGTTC+TGG - chr2.2:14420278-14420297 None:intergenic 45.0%
GTGTCATCCATTTCAATGGC+AGG + chr2.2:14420225-14420244 MS.gene87272:CDS 45.0%
GTTGACGATGTTGAGAATGC+TGG + chr2.2:14420203-14420222 MS.gene87272:CDS 45.0%
TAGGAATTGTCAACAAGGGC+AGG - chr2.2:14418964-14418983 None:intergenic 45.0%
TCAAAGTGAAAGTTGCGTCG+AGG + chr2.2:14416904-14416923 MS.gene87272:CDS 45.0%
TCAATCCCAACGAATGTGCT+TGG + chr2.2:14419695-14419714 MS.gene87272:CDS 45.0%
TGGAAAAGTGAATGGAGCAG+TGG + chr2.2:14419585-14419604 MS.gene87272:CDS 45.0%
TGGAGAAAGATCAGAAGGTG+AGG + chr2.2:14419223-14419242 MS.gene87272:CDS 45.0%
TTCATGTCAATGTCCCACAG+AGG - chr2.2:14419565-14419584 None:intergenic 45.0%
! AGATAATGTGCTTGCTGCCT+CGG + chr2.2:14419005-14419024 MS.gene87272:CDS 45.0%
! CTAGCTATCCCTTTTACCTC+GGG - chr2.2:14419378-14419397 None:intergenic 45.0%
! GATCCTTTCTGGCATATGCT+TGG + chr2.2:14420155-14420174 MS.gene87272:CDS 45.0%
! GCTAGCTATCCCTTTTACCT+CGG - chr2.2:14419379-14419398 None:intergenic 45.0%
! GTATGCTGCTTGATGCTACA+TGG - chr2.2:14418849-14418868 None:intergenic 45.0%
! TCCCAAACTTCGTCACGTTT+TGG + chr2.2:14418144-14418163 MS.gene87272:intron 45.0%
!! GAAAAGAGGGAGAGTACCTA+TGG - chr2.2:14417042-14417061 None:intergenic 45.0%
!! GCTGGTGTCATCCATTTCAA+TGG + chr2.2:14420221-14420240 MS.gene87272:CDS 45.0%
!! AATTGAAAAATTTAATAAAA+TGG - chr2.2:14418326-14418345 None:intergenic 5.0%
AACGAATGTGCTTGGGCCTA+CGG + chr2.2:14419703-14419722 MS.gene87272:CDS 50.0%
AAGGTGAGGTCGCAGTTTAG+GGG + chr2.2:14419237-14419256 MS.gene87272:CDS 50.0%
ACCTGAGTTTGTGGCAGCTA+GGG + chr2.2:14420084-14420103 MS.gene87272:CDS 50.0%
ACCTGCTGTGATTGAGGTCA+AGG + chr2.2:14419146-14419165 MS.gene87272:CDS 50.0%
ACCTTGCAGTAGCAGGATGA+GGG - chr2.2:14417672-14417691 None:intergenic 50.0%
AGAAGGTGAGGTCGCAGTTT+AGG + chr2.2:14419235-14419254 MS.gene87272:CDS 50.0%
AGGCATGTTACTGTCCTTCC+AGG + chr2.2:14416861-14416880 MS.gene87272:CDS 50.0%
ATATCATCACTGGGTTGCGC+AGG + chr2.2:14419777-14419796 MS.gene87272:CDS 50.0%
CAATGAGAACCAAGCCTGCA+TGG - chr2.2:14419115-14419134 None:intergenic 50.0%
GAAGGTGAGGTCGCAGTTTA+GGG + chr2.2:14419236-14419255 MS.gene87272:CDS 50.0%
GAGTGATGTTGCAACAACCG+AGG - chr2.2:14419025-14419044 None:intergenic 50.0%
GCAGTTTAGGGGAGGTTCAT+CGG + chr2.2:14419248-14419267 MS.gene87272:CDS 50.0%
GCGTGTGTGAGAGAGAAAAG+AGG - chr2.2:14417056-14417075 None:intergenic 50.0%
GCTTTGCCCTGCCATTGAAA+TGG - chr2.2:14420235-14420254 None:intergenic 50.0%
GGAGCAGTGGAAACATGCAA+TGG + chr2.2:14419598-14419617 MS.gene87272:CDS 50.0%
GGCAGCAAGCACATTATCTG+AGG - chr2.2:14419004-14419023 None:intergenic 50.0%
GGTCGTCTACCCAAAATCCT+TGG - chr2.2:14418255-14418274 None:intergenic 50.0%
GTTACTGTCCTTCCAGGCAA+AGG + chr2.2:14416867-14416886 MS.gene87272:CDS 50.0%
TAGGCCCAAGCACATTCGTT+GGG - chr2.2:14419703-14419722 None:intergenic 50.0%
TGAAGTTGCTGCCATGTGAC+TGG - chr2.2:14419926-14419945 None:intergenic 50.0%
TTATGGTAGAAGGGGAGCCT+TGG - chr2.2:14419958-14419977 None:intergenic 50.0%
! ACAGCTGTGGATGGCATTGA+TGG + chr2.2:14416999-14417018 MS.gene87272:CDS 50.0%
! TCGTGTTATTGGTGACCGCA+CGG + chr2.2:14418683-14418702 MS.gene87272:intron 50.0%
! TGTCCTCTTCTTTTCCCCTG+CGG + chr2.2:14418558-14418577 MS.gene87272:intron 50.0%
!! TTGATTTGGAGGCTTGGAGG+AGG + chr2.2:14419737-14419756 MS.gene87272:CDS 50.0%
ATCCTGCTACTGCAAGGTCC+AGG + chr2.2:14417674-14417693 MS.gene87272:intron 55.0%
CAGCTAGGGACATTACCTCC+TGG + chr2.2:14420098-14420117 MS.gene87272:CDS 55.0%
CGGGTAGATGTATCCGAACG+TGG - chr2.2:14419359-14419378 None:intergenic 55.0%
CGTTCGGATACATCTACCCG+AGG + chr2.2:14419359-14419378 MS.gene87272:CDS 55.0%
GACCTGAGTTTGTGGCAGCT+AGG + chr2.2:14420083-14420102 MS.gene87272:CDS 55.0%
GACCTTGCAGTAGCAGGATG+AGG - chr2.2:14417673-14417692 None:intergenic 55.0%
GCAGGAACTAGTTCCGCAGA+CGG - chr2.2:14418946-14418965 None:intergenic 55.0%
GCCTTGACCTCAATCACAGC+AGG - chr2.2:14419150-14419169 None:intergenic 55.0%
GTAGGCCCAAGCACATTCGT+TGG - chr2.2:14419704-14419723 None:intergenic 55.0%
GTCAACACATCGGTGACCGT+TGG - chr2.2:14418654-14418673 None:intergenic 55.0%
TCAATGGCAGGGCAAAGCCA+TGG + chr2.2:14420237-14420256 MS.gene87272:CDS 55.0%
TCCCTAGCTGCCACAAACTC+AGG - chr2.2:14420088-14420107 None:intergenic 55.0%
TCCCTCATCCTGCTACTGCA+AGG + chr2.2:14417668-14417687 MS.gene87272:intron 55.0%
TGACCGCAGGGGAAAAGAAG+AGG - chr2.2:14418564-14418583 None:intergenic 55.0%
TTGCGCGCACACACATAGTC+AGG + chr2.2:14417080-14417099 MS.gene87272:intron 55.0%
! CGTCGAGGCGCCTTTCTTAT+AGG + chr2.2:14416919-14416938 MS.gene87272:CDS 55.0%
ACGCCTTCAGCTACCGTCTG+CGG + chr2.2:14418930-14418949 MS.gene87272:CDS 60.0%
CACCTGGACCTTGCAGTAGC+AGG - chr2.2:14417679-14417698 None:intergenic 60.0%
CGTGCAAACAGTGACCGCAG+GGG - chr2.2:14418575-14418594 None:intergenic 60.0%
GCCATGTGACTGGACCTCAC+AGG - chr2.2:14419916-14419935 None:intergenic 60.0%
GCCTGTGAGGTCCAGTCACA+TGG + chr2.2:14419912-14419931 MS.gene87272:intron 60.0%
GCGTGCAAACAGTGACCGCA+GGG - chr2.2:14418576-14418595 None:intergenic 60.0%
GTGAGGTCGCAGTTTAGGGG+AGG + chr2.2:14419240-14419259 MS.gene87272:CDS 60.0%
GTTCCGCAGACGGTAGCTGA+AGG - chr2.2:14418936-14418955 None:intergenic 60.0%
TGCGTGCAAACAGTGACCGC+AGG - chr2.2:14418577-14418596 None:intergenic 60.0%
! AAGGCGTGCTGCTGCGTTGT+TGG - chr2.2:14418917-14418936 None:intergenic 60.0%
TTGCGCGACTCGAGCCTGTG+AGG + chr2.2:14419899-14419918 MS.gene87272:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 14416834 14420352 14416834 ID=MS.gene87272
chr2.2 mRNA 14416834 14420352 14416834 ID=MS.gene87272.t1;Parent=MS.gene87272
chr2.2 exon 14416834 14417044 14416834 ID=MS.gene87272.t1.exon1;Parent=MS.gene87272.t1
chr2.2 CDS 14416834 14417044 14416834 ID=cds.MS.gene87272.t1;Parent=MS.gene87272.t1
chr2.2 exon 14418229 14418284 14418229 ID=MS.gene87272.t1.exon2;Parent=MS.gene87272.t1
chr2.2 CDS 14418229 14418284 14418229 ID=cds.MS.gene87272.t1;Parent=MS.gene87272.t1
chr2.2 exon 14418393 14418548 14418393 ID=MS.gene87272.t1.exon3;Parent=MS.gene87272.t1
chr2.2 CDS 14418393 14418548 14418393 ID=cds.MS.gene87272.t1;Parent=MS.gene87272.t1
chr2.2 exon 14418790 14419380 14418790 ID=MS.gene87272.t1.exon4;Parent=MS.gene87272.t1
chr2.2 CDS 14418790 14419380 14418790 ID=cds.MS.gene87272.t1;Parent=MS.gene87272.t1
chr2.2 exon 14419496 14419798 14419496 ID=MS.gene87272.t1.exon5;Parent=MS.gene87272.t1
chr2.2 CDS 14419496 14419798 14419496 ID=cds.MS.gene87272.t1;Parent=MS.gene87272.t1
chr2.2 exon 14420071 14420352 14420071 ID=MS.gene87272.t1.exon6;Parent=MS.gene87272.t1
chr2.2 CDS 14420071 14420352 14420071 ID=cds.MS.gene87272.t1;Parent=MS.gene87272.t1
Gene Sequence

>MS.gene87272

ATGCAGCTGCATATATCTCCAAGTTTGAGGCATGTTACTGTCCTTCCAGGCAAAGGACTTAAAGAGTTTATCAAAGTGAAAGTTGCGTCGAGGCGCCTTTCTTATAGGATGCTCTTCTATTCACTTTTGTTCTTCACTTTTCTTCTGAGGTTTGTGTTTGTTTTAACAGCTGTGGATGGCATTGATGGACAAAACAAGTGCTCTACCATAGGTACTCTCCCTCTTTTCTCTCTCACACACGCACACTTGCGCGCACACACATAGTCAGGTCGCCTTTAGTCACAATATCTCGCTTTCATCGCAGTTAGACTGTCAGAATAGTCTAATGATTCATATTTTAAACTCGGTAAATTAGATTTAAAAATTACGCATAATATGAATTCTCAAGTCACATTATGAATCATGAGATGATTACGCAGTTAGAAAGAAGGTTAGAATAGTTGAATAAATATTAGATGATTCATATTTTAAACTCGGTAAATTGAATTTCGAGACAATTCAAAATATGAATCATTTGATCTTCAATCAATGGTTCTGATTAAATAACTATAGTAATTATGTCACATTTTGGCCCTAAGGAATCTATTTCCTACATAGACAGAGTCACAAGCATGAACACATGTGTGAAGGTGGATAAGGCTTAAGTTTTCTATATATCAAAGCATGTTATTTTTTGCAAAGGCTTTGAACTTCTAATGATTTAAATAACTATTTTTGCTGCATCCAACCTCTAACAAATCAATAAAAATGTTACCGGCTTTTGATTTTAAAATCTTATCTGATACTCAGTTTGTTTATCTAATCAGAAAATGTACTACTATTTTTTTATGATTATCCCTCATCCTGCTACTGCAAGGTCCAGGTGAATCTGTAATAACAGACACATCAAACAAAAATACAGATATCTAATAAAGATTCTTTATGTTATCACTTTTGTCAGAACTGTACTTTATGTATCTTGTACAATTAGAATAGTTACTGTTGGAGCAAGCTTGACCATAGAATAAAAAATTTCATTAATACAGCACAAACTCATAAGACCTTGCATATAATGAATTATCTTGTAATTTGATAATTACAATGCTAAAGCATGAATTTTAGATTTAACTTGCCTCAAATTCTGGACTTTATGTTTCATAGTTTTTTTAAAAATTAAAGACTTGTTACAACTTGACATCACAATTCCATTATAAGTTATTTTAACAGTTCAAAACTTGTCTGTATTTTTATATGGTTGACAATTTAATAATAATTTTTTATCTCTCCTATAATGAAGCTAAGACTTAATTTAGATCTATTTTCATATGGTATCCCAAACTTCGTCACGTTTTGGTTATTCAAATATCACTCATATTTATATATGATATTTTGATTAACTTCTAATTATATTTGCAGGTTGTCTGGGAAAAAAATTAGGGCCAAGGATTTTGGGTAGACGACCTGAATCAACTGTAATCTCTTAACTCTTCTGATAAGCTGAAAAATATTACCATTTTATTAAATTTTTCAATTATTTTGATTTTCTATTGGTGGCTGAAAATGACATGACTTTTTCATAGGTCCCAGAAGTGATATACCAAACTTTAGATGAACCAATTGGCAATGATGAACTAAAGGGAAGGTTTGATATTCCACAAACTTTAGAAGAGTTCATGGTTAAAATGAAGGAAGGTGGATATGATGCCAAAACATTTGCAGTTAAACTTAGAGAAATGGTACAACACTGTCCTCTTCTTTTCCCCTGCGGTCACTGTTTGCACGCATTAACGCAATCAGCACATTTGTGACCGTTGGATTGAAATTTTACAGTTCTCAATCCAACGGTCACCGATGTGTTGACCACTAGAATTCGTGTTATTGGTGACCGCACGGAATCCAAATTTGAAATAATTCTAGTGATTTTCTTGCACCTTTTCAAGTTGAAGTCTCAAATAATGATAAATGAACTGTTATTAGGTAACCCTTATGGAACAAAGGACTAGGTTGGCCAAAATCCAAGAGTATCTATATCGCCATGTAGCATCAAGCAGCATACCGAAACAACTTCATTGTCTTGACTTGAGATTAGCACATGAGCATACCAACAACGCAGCAGCACGCCTTCAGCTACCGTCTGCGGAACTAGTTCCTGCCCTTGTTGACAATTCCTATTACCATTTTGTTTTAGCCTCAGATAATGTGCTTGCTGCCTCGGTTGTTGCAACATCACTCGTTCGTAACTGTTTACGACCTAATAAGGTTGTTATACACATAATTACAGACCGGAAGACTTATTATCCCATGCAGGCTTGGTTCTCATTGCATCCTTTATCACCTGCTGTGATTGAGGTCAAGGCATTGCACCATTTTGATTGGTTTTCAAAGGGGAAGGTACCTGTTTTAGAAGCAATGGAGAAAGATCAGAAGGTGAGGTCGCAGTTTAGGGGAGGTTCATCGGCTATAGTTGCGAATACATCTGAGAAGCCAAATGTTATTGCAGCAAAACTACAGGCACTTAGTCCGAAGTATAATTCAGTGATGAACCACGTTCGGATACATCTACCCGAGGTAAAAGGGATAGCTAGCATAGCAAGTAAATCATTTTTGTTTTTTGATAGCTTATAACCAAATAAATGTTTTTGTGCACTGTGATGCTTATAACAATGACAATTTTTCATAACAGTTGTTTCCAAGTCTTAACAAGGTGGTCTTCCTCGACGATGACATTGTGATACAAACTGATCTTACACCTCTGTGGGACATTGACATGAATGGAAAAGTGAATGGAGCAGTGGAAACATGCAATGGAGAAGACAAGTTTGTGATGTCAAAAAGGTTGAAAAGTTATTTGAACTTTTCTCACCCTCTAATATCTAAAAATTTCAATCCCAACGAATGTGCTTGGGCCTACGGCATGAACATTTTTGATTTGGAGGCTTGGAGGAGGACCAATATAAGCAATACATATCATCACTGGGTTGCGCAGGTATGTTTGTATTACATTCTACAGAAAAGGGAATATGCATTGTGAGTGTAACTAGATACTGACGGTGCATCTCCAATGCCTTTTGTTTGAAAGAGCTTGGTTGCGCGACTCGAGCCTGTGAGGTCCAGTCACATGGCAGCAACTTCAATTGTTGTGCCAAGGCTCCCCTTCTACCATAATACAATAAAGACAAATATGTATTATAATTGAATTTCCATAAAAGTGATAGCTCATAAGATATAGTATTGATATTTTCATTTTGATTTATGCAGAATATTAAATCAGACCTGAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTGATAGCATTTCATGGTCATGTCCACGTTATAGATCCTTTCTGGCATATGCTTGGATTGGGATATCAGGAAAATACAAATGTTGACGATGTTGAGAATGCTGGTGTCATCCATTTCAATGGCAGGGCAAAGCCATGGCTAGACATAGCTTTTCCAGAACTAAGGTCATTGTGGACAAAATATGTCGACTTCTCAGATAAGTTCATTAAAAGCTGCAACATTAGAGCATGA
Protein sequence

>MS.gene87272.t1

MQLHISPSLRHVTVLPGKGLKEFIKVKVASRRLSYRMLFYSLLFFTFLLRFVFVLTAVDGIDGQNKCSTIGCLGKKLGPRILGRRPESTVPEVIYQTLDEPIGNDELKGRFDIPQTLEEFMVKMKEGGYDAKTFAVKLREMVTLMEQRTRLAKIQEYLYRHVASSSIPKQLHCLDLRLAHEHTNNAAARLQLPSAELVPALVDNSYYHFVLASDNVLAASVVATSLVRNCLRPNKVVIHIITDRKTYYPMQAWFSLHPLSPAVIEVKALHHFDWFSKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTSEKPNVIAAKLQALSPKYNSVMNHVRIHLPELFPSLNKVVFLDDDIVIQTDLTPLWDIDMNGKVNGAVETCNGEDKFVMSKRLKSYLNFSHPLISKNFNPNECAWAYGMNIFDLEAWRRTNISNTYHHWVAQNIKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTNVDDVENAGVIHFNGRAKPWLDIAFPELRSLWTKYVDFSDKFIKSCNIRA