AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87374

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87374.t1 MTR_8g078760 97.125 626 18 0 1 626 1 626 0.0 1266
MS.gene87374.t1 MTR_8g078760 96.415 530 19 0 1 530 1 530 0.0 1067
MS.gene87374.t1 MTR_5g018820 67.937 630 177 12 5 626 12 624 0.0 808
MS.gene87374.t1 MTR_4g068920 42.233 618 308 11 26 625 47 633 1.30e-142 429
MS.gene87374.t1 MTR_5g012790 29.088 636 360 16 12 625 22 588 2.93e-68 233
MS.gene87374.t1 MTR_8g079840 28.976 459 286 7 169 620 170 595 2.18e-42 162
MS.gene87374.t1 MTR_5g079910 30.372 349 212 8 296 624 176 513 4.35e-39 151
MS.gene87374.t1 MTR_5g017790 29.940 334 193 7 294 620 245 544 4.56e-38 149
MS.gene87374.t1 MTR_5g017790 29.940 334 193 7 294 620 233 532 5.55e-38 148
MS.gene87374.t1 MTR_3g101340 31.138 334 190 7 296 620 235 537 2.15e-37 146
MS.gene87374.t1 MTR_3g101340 31.138 334 190 7 296 620 261 563 4.41e-37 146
MS.gene87374.t1 MTR_1g021040 27.434 565 359 17 66 620 22 545 8.17e-37 145
MS.gene87374.t1 MTR_4g058015 30.595 353 200 10 299 620 351 689 1.19e-36 146
MS.gene87374.t1 MTR_3g101340 30.882 340 191 8 296 620 260 570 2.94e-35 140
MS.gene87374.t1 MTR_3g073590 30.303 231 149 4 391 618 581 802 7.92e-23 103
MS.gene87374.t1 MTR_8g079840 26.997 363 228 7 169 528 170 498 4.39e-22 100
MS.gene87374.t1 MTR_8g033290 32.778 180 110 3 398 574 408 579 3.43e-21 98.6
MS.gene87374.t1 MTR_5g061340 31.694 183 116 3 404 584 766 941 2.78e-19 92.8
MS.gene87374.t1 MTR_1g035690 32.222 180 110 4 398 574 386 556 9.66e-17 84.3
MS.gene87374.t1 MTR_5g017790 28.804 184 100 4 294 475 245 399 1.78e-16 82.4
MS.gene87374.t1 MTR_5g079910 25.806 186 122 4 296 468 176 358 1.75e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87374.t1 AT5G66600 56.508 630 229 15 10 626 17 614 0.0 637
MS.gene87374.t1 AT5G66600 56.508 630 229 15 10 626 17 614 0.0 637
MS.gene87374.t1 AT5G66600 56.508 630 229 15 10 626 17 614 0.0 637
MS.gene87374.t1 AT5G66600 56.508 630 229 15 10 626 17 614 0.0 637
MS.gene87374.t1 AT5G66600 56.508 630 229 15 10 626 17 614 0.0 637
MS.gene87374.t1 AT5G66600 56.844 621 225 14 17 626 6 594 0.0 633
MS.gene87374.t1 AT5G66600 58.609 575 201 12 61 626 14 560 0.0 619
MS.gene87374.t1 AT5G66600 55.198 529 196 13 10 528 17 514 8.69e-177 512
MS.gene87374.t1 AT5G66600 55.198 529 196 13 10 528 17 514 8.69e-177 512
MS.gene87374.t1 AT5G66600 55.198 529 196 13 10 528 17 514 8.69e-177 512
MS.gene87374.t1 AT5G66600 55.198 529 196 13 10 528 17 514 8.69e-177 512
MS.gene87374.t1 AT5G66600 53.170 489 189 12 10 488 17 475 3.69e-152 448
MS.gene87374.t1 AT5G66600 53.170 489 189 12 10 488 17 475 3.69e-152 448
MS.gene87374.t1 AT5G66600 53.170 489 189 12 10 488 17 475 3.69e-152 448
MS.gene87374.t1 AT2G23700 54.545 451 177 9 181 626 280 707 9.94e-151 452
MS.gene87374.t1 AT2G23700 46.369 179 84 6 5 175 1 175 1.59e-27 118
MS.gene87374.t1 AT5G66600 55.530 434 161 9 61 488 14 421 8.37e-146 430
MS.gene87374.t1 AT3G18900 39.416 548 236 12 79 620 68 525 2.79e-108 336
MS.gene87374.t1 AT3G18900 39.416 548 236 12 79 620 73 530 4.17e-108 336
MS.gene87374.t1 AT3G18900 40.038 522 218 11 104 620 18 449 2.74e-107 331
MS.gene87374.t1 AT3G18900 40.038 522 218 11 104 620 18 449 2.74e-107 331
MS.gene87374.t1 AT3G18900 37.665 454 189 10 79 528 73 436 2.17e-73 243
MS.gene87374.t1 AT1G76620 36.865 453 247 12 198 625 83 521 3.19e-73 244
MS.gene87374.t1 AT1G21060 39.535 344 188 5 281 623 170 494 1.70e-66 226
MS.gene87374.t1 AT1G21060 39.535 344 188 5 281 623 182 506 1.75e-66 226
MS.gene87374.t1 AT5G47380 33.811 349 189 4 292 626 216 536 1.06e-65 225
MS.gene87374.t1 AT5G47380 33.811 349 189 4 292 626 272 592 5.92e-65 225
MS.gene87374.t1 AT5G47380 33.811 349 189 4 292 626 272 592 8.62e-65 224
MS.gene87374.t1 AT1G43020 36.888 347 172 5 281 626 140 440 1.25e-64 219
MS.gene87374.t1 AT3G18900 35.208 409 171 10 79 483 73 391 1.21e-53 189
MS.gene87374.t1 AT3G13000 32.961 358 206 8 293 620 192 545 2.82e-48 177
MS.gene87374.t1 AT3G13000 32.961 358 206 8 293 620 221 574 4.90e-48 177
MS.gene87374.t1 AT3G13000 32.961 358 206 8 293 620 221 574 4.90e-48 177
MS.gene87374.t1 AT1G16750 32.033 359 204 10 296 620 175 527 5.19e-45 168
MS.gene87374.t1 AT5G47380 34.677 248 126 3 292 531 272 491 1.55e-41 158
MS.gene87374.t1 AT1G76620 35.938 320 167 11 233 528 118 423 3.83e-41 155
MS.gene87374.t1 AT5G47380 34.979 243 122 3 292 526 272 486 6.53e-41 156
MS.gene87374.t1 AT5G42690 32.628 331 184 10 299 620 186 486 5.75e-39 150
MS.gene87374.t1 AT5G42690 32.628 331 184 10 299 620 237 537 7.71e-39 150
MS.gene87374.t1 AT5G42690 32.628 331 184 10 299 620 211 511 7.91e-39 150
MS.gene87374.t1 AT5G42690 32.628 331 184 10 299 620 238 538 7.97e-39 150
MS.gene87374.t1 AT5G42690 32.628 331 184 10 299 620 238 538 7.97e-39 150
MS.gene87374.t1 AT1G43020 35.547 256 118 5 281 536 140 348 3.58e-38 145
MS.gene87374.t1 AT4G37080 30.473 338 171 7 298 620 320 608 1.15e-37 148
MS.gene87374.t1 AT4G37080 30.473 338 171 7 298 620 320 608 1.15e-37 148
MS.gene87374.t1 AT4G37080 30.473 338 171 7 298 620 307 595 1.27e-37 148
MS.gene87374.t1 AT3G12540 29.111 371 231 10 265 620 150 503 5.10e-35 139
MS.gene87374.t1 AT3G12540 29.032 372 230 11 265 620 217 570 7.24e-35 139
MS.gene87374.t1 AT5G60720 29.692 357 208 11 299 620 341 689 4.81e-32 132
MS.gene87374.t1 AT2G39690 28.869 336 208 8 299 620 178 496 4.85e-31 127
MS.gene87374.t1 AT2G39690 28.869 336 208 8 299 620 204 522 5.88e-31 127
MS.gene87374.t1 AT2G39690 28.869 336 209 8 299 620 97 416 9.46e-31 125
MS.gene87374.t1 AT2G39690 28.994 338 206 9 299 620 178 497 1.37e-30 126
MS.gene87374.t1 AT2G39690 28.994 338 206 9 299 620 204 523 1.53e-30 126
MS.gene87374.t1 AT1G16750 32.159 227 125 7 296 498 175 396 2.57e-26 112
MS.gene87374.t1 AT4G08550 28.571 224 148 5 394 614 419 633 2.10e-21 99.4
MS.gene87374.t1 AT4G08550 28.571 224 148 5 394 614 473 687 2.53e-21 99.0
MS.gene87374.t1 AT1G43020 32.804 189 76 4 281 463 140 283 4.53e-19 88.6
MS.gene87374.t1 AT1G43020 32.804 189 76 4 281 463 140 283 6.96e-19 88.6
MS.gene87374.t1 AT1G43020 32.804 189 76 4 281 463 140 283 6.96e-19 88.6
MS.gene87374.t1 AT2G39690 28.692 237 145 6 299 528 204 423 2.34e-17 85.5
MS.gene87374.t1 AT3G11920 33.540 161 97 4 415 572 430 583 2.43e-17 86.3
MS.gene87374.t1 AT2G39690 28.452 239 144 7 299 528 204 424 7.79e-17 84.0
MS.gene87374.t1 AT4G37080 28.631 241 113 6 298 528 320 511 6.48e-16 81.3
MS.gene87374.t1 AT2G39690 29.775 178 121 3 299 475 178 352 5.20e-15 77.4

Find 130 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAGCTTATTAGCTGTTTC+TGG 0.133513 8.3:+25534608 None:intergenic
AGAGTTAGAAGTTGTATATT+TGG 0.184488 8.3:-25535304 MS.gene87374:CDS
TCCTTCACTGTTTCCTTATC+AGG 0.197617 8.3:+25536729 None:intergenic
AGAATAAAAGTTATGTTCTT+AGG 0.242399 8.3:-25537354 None:intergenic
GATACATTCTCCAAAGATTC+AGG 0.252803 8.3:-25533080 MS.gene87374:CDS
GAGAATGTATCTACAATCTT+AGG 0.257134 8.3:+25533092 None:intergenic
CTGGAATATGATCACATATT+CGG 0.260667 8.3:+25534627 None:intergenic
AACAGTTGCTCCAGAATTTC+AGG 0.263889 8.3:-25534307 MS.gene87374:CDS
AAGACTAGAAGATCAATTTA+AGG 0.265550 8.3:-25535837 MS.gene87374:CDS
CTTCACTTTGCACTTTGTTC+AGG 0.277336 8.3:-25533459 MS.gene87374:CDS
ACACTCTTTCTCAGGGATTC+AGG 0.278846 8.3:+25533014 None:intergenic
CTTGCTCTAGGTGTTGTTAC+AGG 0.286178 8.3:+25535180 None:intergenic
TTGCTGTAGATGTTGAATAT+TGG 0.297690 8.3:+25534959 None:intergenic
TAATAAGCTTTCTGAGGATA+TGG 0.308473 8.3:-25534597 MS.gene87374:CDS
TGCTGTAGATGTTGAATATT+GGG 0.327313 8.3:+25534960 None:intergenic
ACGAGGAGAAGTTAGCTTTC+TGG 0.336440 8.3:-25534238 MS.gene87374:CDS
TGGGGTATTGTCGTGTCATT+TGG 0.343001 8.3:+25535761 None:intergenic
GTTGTTGTTCAAATGCTTTA+CGG 0.343548 8.3:+25535259 None:intergenic
ATTTCTTAACACTCTTTCTC+AGG 0.352274 8.3:+25533006 None:intergenic
TACAGGCTGCATATAATGTT+GGG 0.354407 8.3:-25533950 MS.gene87374:intron
ATATGGCAGCTTTCCTGATA+AGG 0.366194 8.3:-25536742 MS.gene87374:intron
AAGAGTCTTTCTTCTCTTGA+AGG 0.368777 8.3:-25534059 MS.gene87374:intron
ATGAGACAAACCTGAATCTT+TGG 0.370103 8.3:+25533070 None:intergenic
ACCTCAACCATGGTGCTATA+TGG 0.372022 8.3:+25534371 None:intergenic
AAGAAATGTCATGCAAAATC+CGG 0.384303 8.3:-25532990 MS.gene87374:CDS
AATCCATTCTATGCTCTTCC+CGG 0.388268 8.3:+25532971 None:intergenic
AAATAAGTGACCTGAAATTC+TGG 0.390317 8.3:+25534297 None:intergenic
ACAATACAAAATACTATACT+AGG 0.390880 8.3:-25533906 MS.gene87374:CDS
GAGGAGTTATTTCTTAAGCC+TGG 0.406033 8.3:+25534452 None:intergenic
TGGAATATGATCACATATTC+GGG 0.406975 8.3:+25534628 None:intergenic
AAAGGCACTTATCGAAGTAC+TGG 0.408182 8.3:+25534505 None:intergenic
AGTTCTTGAAACACTCTCTT+CGG 0.410304 8.3:+25533182 None:intergenic
GTATGTCGAACATTATTCAT+AGG 0.412449 8.3:+25536019 None:intergenic
GAAAGGCCCGGATTAGTTAC+AGG 0.413105 8.3:+25534533 None:intergenic
TCCTCGTGTTTCAACTTCCC+CGG 0.415076 8.3:+25534254 None:intergenic
TTCAAATGCTTTACGGTACA+AGG 0.416852 8.3:+25535266 None:intergenic
GATAATCCTTTCAACGTTGA+AGG 0.421345 8.3:-25534413 MS.gene87374:CDS
AATTATTTAACCAGCTCCTT+AGG 0.423672 8.3:+25532918 None:intergenic
GATGCAGATGCAGCCACGGC+GGG 0.428257 8.3:+25535231 None:intergenic
CTCTTTGAACGATTATGCCT+TGG 0.428577 8.3:+25537176 None:intergenic
AGACCCACCTGTAACTAATC+CGG 0.455051 8.3:-25534540 MS.gene87374:CDS
GAGTACATTAGAGCCACGTT+TGG 0.459510 8.3:-25533143 MS.gene87374:CDS
TTCTGCTAGGCTGATTACTT+TGG 0.460335 8.3:+25534661 None:intergenic
TCTTTGATTAATTCTGTGGT+TGG 0.461028 8.3:+25535339 None:intergenic
TGAGATTCATACACTTCAAA+AGG 0.462070 8.3:-25535088 MS.gene87374:CDS
CCGAATGTCTCGTCCTGGAC+AGG 0.462864 8.3:-25533880 MS.gene87374:intron
TCAATTAGAAGACGTAGATC+CGG 0.462943 8.3:-25534273 MS.gene87374:CDS
TTTCAACGTTGAAGGATTCA+AGG 0.464834 8.3:-25534405 MS.gene87374:CDS
GGAATGTAGTAGATATAAAC+CGG 0.467595 8.3:-25535067 MS.gene87374:CDS
CAAGGCGACACTTGGAGTCC+AGG 0.468395 8.3:-25534470 MS.gene87374:CDS
TTGAATCCTTCAACGTTGAA+AGG 0.468691 8.3:+25534407 None:intergenic
AATGTCTTTGATTAATTCTG+TGG 0.470476 8.3:+25535335 None:intergenic
TATGTCGAACATTATTCATA+GGG 0.472023 8.3:+25536020 None:intergenic
TGCAGATGCAGCCACGGCGG+GGG 0.472343 8.3:+25535233 None:intergenic
CCTCAGGTGGAGAAACTTGA+AGG 0.473556 8.3:+25535154 None:intergenic
TTCTCAACCCTTGTCCATGA+TGG 0.474398 8.3:-25534887 MS.gene87374:CDS
TTACAGGCTGCATATAATGT+TGG 0.475584 8.3:-25533951 MS.gene87374:intron
CAATTAGAAGACGTAGATCC+GGG 0.478964 8.3:-25534272 MS.gene87374:CDS
AGTACATTAGAGCCACGTTT+GGG 0.481357 8.3:-25533142 MS.gene87374:CDS
GAAGGATTCAAGGAGTTTAG+TGG 0.483934 8.3:-25534395 MS.gene87374:CDS
TCGAAGACAAAATTCAAAGC+TGG 0.492088 8.3:-25533525 MS.gene87374:CDS
ACAAAATTCAAAGCTGGAGA+TGG 0.496463 8.3:-25533519 MS.gene87374:CDS
TTTGGATTAACAAGAGATAT+CGG 0.496903 8.3:+25535779 None:intergenic
ATTGTATGTTCCACCTGTCC+AGG 0.497922 8.3:+25533867 None:intergenic
TTGGCGATCAAGGCGACACT+TGG 0.504516 8.3:-25534478 MS.gene87374:CDS
GGACAAGGGTTGAGAATAGC+AGG 0.512212 8.3:+25534894 None:intergenic
GGTCAGATGCACATTAGAAA+AGG 0.512990 8.3:-25535816 MS.gene87374:CDS
GCCATATAGCACCATGGTTG+AGG 0.515583 8.3:-25534372 MS.gene87374:CDS
GCCTTGATCGCCAATAGAAA+AGG 0.516651 8.3:+25534487 None:intergenic
GGGATTCAGGTAGAGACTGT+TGG 0.520236 8.3:+25533027 None:intergenic
TTATAAAGAGAATCAGAAGT+TGG 0.520246 8.3:-25534339 MS.gene87374:CDS
CCTGTCCAGGACGAGACATT+CGG 0.522899 8.3:+25533880 None:intergenic
GCAAAGTGAAGAAGAGACTC+AGG 0.524963 8.3:+25533471 None:intergenic
ATCCAACTGTACATCAAAAG+AGG 0.526183 8.3:+25534433 None:intergenic
GATTCAGGTTTGTCTCATGC+TGG 0.527367 8.3:-25533065 MS.gene87374:CDS
GGGTGCCGAATGTCTCGTCC+TGG 0.527623 8.3:-25533885 MS.gene87374:CDS
TGATTCTCTTTATAAATCCA+CGG 0.529330 8.3:+25534347 None:intergenic
GACCCACCTGTAACTAATCC+GGG 0.536015 8.3:-25534539 MS.gene87374:CDS
AAGGATTCAAGGAGTTTAGT+GGG 0.542529 8.3:-25534394 MS.gene87374:CDS
GACTTGAAGGTGTGATTCCA+AGG 0.543192 8.3:-25537193 MS.gene87374:CDS
CCTTCAAGTTTCTCCACCTG+AGG 0.548538 8.3:-25535154 MS.gene87374:CDS
AGAAATGTCATGCAAAATCC+GGG 0.554408 8.3:-25532989 MS.gene87374:CDS
TTGATCCGGTTCCAGGACAC+AGG 0.559997 8.3:-25536082 MS.gene87374:intron
GACTTCAGATCAAACAAAGC+TGG 0.565264 8.3:-25536685 MS.gene87374:intron
ATATCTGATACCTAAGGAGC+TGG 0.567502 8.3:-25532928 MS.gene87374:CDS
AATCCGGGAAGAGCATAGAA+TGG 0.571165 8.3:-25532974 MS.gene87374:CDS
ACAGGCTGCATATAATGTTG+GGG 0.573278 8.3:-25533949 MS.gene87374:intron
AGCATGACTTACCTCCATCA+TGG 0.578988 8.3:+25534873 None:intergenic
TCGAAGTACTGGGAGATGAA+AGG 0.580370 8.3:+25534516 None:intergenic
TCAAGAACTAGAAGTTGCAA+AGG 0.580877 8.3:-25533168 MS.gene87374:CDS
TTTCTTAACACTCTTTCTCA+GGG 0.582135 8.3:+25533007 None:intergenic
TGCACATTAGAAAAGGCACT+TGG 0.582167 8.3:-25535809 MS.gene87374:CDS
TATCGAAAAGTGAAGTTGTG+TGG 0.588149 8.3:+25532948 None:intergenic
TCACAGAATGCAGTGCAACT+AGG 0.592322 8.3:-25536054 MS.gene87374:CDS
ACTTGAAGGACTCTTGCTCT+AGG 0.596721 8.3:+25535168 None:intergenic
AAATGACACGACAATACCCC+AGG 0.596729 8.3:-25535759 MS.gene87374:intron
GGGTACCGAGATGTTCTGCT+AGG 0.605749 8.3:+25534648 None:intergenic
GCTCTAGGTGTTGTTACAGG+AGG 0.608021 8.3:+25535183 None:intergenic
GGCTGCATCTGCATCTACCG+TGG 0.609003 8.3:-25535223 MS.gene87374:CDS
CAGGCTGCATATAATGTTGG+GGG 0.609379 8.3:-25533948 MS.gene87374:CDS
TCCTGATAAGGAAACAGTGA+AGG 0.611868 8.3:-25536730 MS.gene87374:CDS
TGATAAGGAAACAGTGAAGG+AGG 0.613956 8.3:-25536727 MS.gene87374:CDS
AACAGCTAATAAGCTTTCTG+AGG 0.613973 8.3:-25534603 MS.gene87374:CDS
TCAACCCTTGTCCATGATGG+AGG 0.616259 8.3:-25534884 MS.gene87374:intron
GGTAGATGCAGATGCAGCCA+CGG 0.616483 8.3:+25535227 None:intergenic
ACTTACCTCCATCATGGACA+AGG 0.618958 8.3:+25534879 None:intergenic
CAATACAAAATACTATACTA+GGG 0.624356 8.3:-25533905 MS.gene87374:CDS
ATGCAGATGCAGCCACGGCG+GGG 0.627236 8.3:+25535232 None:intergenic
GTACTGGGAGATGAAAGGCC+CGG 0.628975 8.3:+25534521 None:intergenic
ATCAGCCTAGCAGAACATCT+CGG 0.635510 8.3:-25534653 MS.gene87374:CDS
TCGACATACGCTGAAGCAAG+AGG 0.636747 8.3:-25536005 MS.gene87374:intron
ATGTCGAACATTATTCATAG+GGG 0.640528 8.3:+25536021 None:intergenic
AAGGCACTTATCGAAGTACT+GGG 0.648011 8.3:+25534506 None:intergenic
GGCCCGGATTAGTTACAGGT+GGG 0.648540 8.3:+25534537 None:intergenic
GTCCTTGCGTATCCCAAACG+TGG 0.649954 8.3:+25533130 None:intergenic
GCACCATGGTTGAGGTACCG+TGG 0.651466 8.3:-25534364 MS.gene87374:CDS
AGGCCCGGATTAGTTACAGG+TGG 0.655654 8.3:+25534536 None:intergenic
AGCCACGTTTGGGATACGCA+AGG 0.661192 8.3:-25533132 MS.gene87374:CDS
TGTTGAATATTGGGATAACG+AGG 0.674428 8.3:+25534969 None:intergenic
AGGAAACCACTCTGATCCAG+CGG 0.677699 8.3:-25533439 MS.gene87374:intron
CAAGGCATAATCGTTCAAAG+AGG 0.687916 8.3:-25537175 MS.gene87374:intron
TAGTGGGCCATATAGCACCA+TGG 0.691143 8.3:-25534378 MS.gene87374:CDS
TAGTTGCACTGCATTCTGTG+AGG 0.692782 8.3:+25536056 None:intergenic
AATTAGAAGACGTAGATCCG+GGG 0.693156 8.3:-25534271 MS.gene87374:CDS
AGATGCAGATGCAGCCACGG+CGG 0.694499 8.3:+25535230 None:intergenic
AATCCACGGTACCTCAACCA+TGG 0.702876 8.3:+25534361 None:intergenic
CTTACCTCCATCATGGACAA+GGG 0.706059 8.3:+25534880 None:intergenic
TCCGGGGAAGTTGAAACACG+AGG 0.710869 8.3:-25534255 MS.gene87374:CDS
TAAGTACCGCTGGATCAGAG+TGG 0.729686 8.3:+25533433 None:intergenic
TCTTCGAAGAAAAGAACACG+CGG 0.751610 8.3:+25533541 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAATAATTTACACATA+AGG + chr8.3:25536480-25536499 None:intergenic 10.0%
!!! CTTTGTTTTTTTTTTTTTTT+TGG - chr8.3:25532954-25532973 MS.gene87374:CDS 10.0%
!!! TATTATAAGTTTGAAATATT+TGG - chr8.3:25534824-25534843 MS.gene87374:intron 10.0%
!!! TTTACTGTTTTTATATTATA+TGG - chr8.3:25533503-25533522 MS.gene87374:CDS 10.0%
!!! AAAAAACATTCAGAAAATTT+TGG + chr8.3:25533863-25533882 None:intergenic 15.0%
!!! AAAAACATTCAGAAAATTTT+GGG + chr8.3:25533862-25533881 None:intergenic 15.0%
!!! AAATAGTTTTAATTAAAGCA+TGG - chr8.3:25533781-25533800 MS.gene87374:intron 15.0%
!!! AATTGTTATTTTTTTCCTTT+TGG - chr8.3:25533341-25533360 MS.gene87374:intron 15.0%
!!! ATTGTTATTTTTTTCCTTTT+GGG - chr8.3:25533342-25533361 MS.gene87374:intron 15.0%
!!! TTATTTTGCAAAATTTAACA+TGG - chr8.3:25533882-25533901 MS.gene87374:CDS 15.0%
!!! TTTTCTAGCTTTTTTAAATT+GGG - chr8.3:25533645-25533664 MS.gene87374:intron 15.0%
!!! TTTTTAAATTGGGAATTTAA+AGG - chr8.3:25533655-25533674 MS.gene87374:intron 15.0%
!!! TTTTTCTAGCTTTTTTAAAT+TGG - chr8.3:25533644-25533663 MS.gene87374:intron 15.0%
!! AATCTTATTAATAGTGAACT+TGG + chr8.3:25534592-25534611 None:intergenic 20.0%
!! AATGTGTAATGATCATTTAA+GGG + chr8.3:25534793-25534812 None:intergenic 20.0%
!! ACAATACAAAATACTATACT+AGG - chr8.3:25536356-25536375 MS.gene87374:intron 20.0%
!! ACAATTTAGTACATTAATTC+TGG + chr8.3:25534683-25534702 None:intergenic 20.0%
!! AGAGAAATGAAATGTATTAA+AGG + chr8.3:25536109-25536128 None:intergenic 20.0%
!! ATCACAATTAATTGTATATG+TGG - chr8.3:25533752-25533771 MS.gene87374:intron 20.0%
!! CAATACAAAATACTATACTA+GGG - chr8.3:25536357-25536376 MS.gene87374:intron 20.0%
!! CCAGTAATAATTTGAAAAAA+TGG + chr8.3:25534001-25534020 None:intergenic 20.0%
!! GAGAAATGAAATGTATTAAA+GGG + chr8.3:25536108-25536127 None:intergenic 20.0%
!!! ACAATAGGAATTTTTACTAA+GGG + chr8.3:25536651-25536670 None:intergenic 20.0%
!!! ACTAATTTTCTATATCCATT+TGG - chr8.3:25533365-25533384 MS.gene87374:intron 20.0%
!!! ATAACTTTGATTTTTCATGA+TGG - chr8.3:25533033-25533052 MS.gene87374:CDS 20.0%
!!! CCATTTTTTCAAATTATTAC+TGG - chr8.3:25533998-25534017 MS.gene87374:intron 20.0%
!!! TAACTTTGATTTTTCATGAT+GGG - chr8.3:25533034-25533053 MS.gene87374:CDS 20.0%
! AAATGTATTAAAGGGTAACA+TGG + chr8.3:25536100-25536119 None:intergenic 25.0%
! AAGACTAGAAGATCAATTTA+AGG - chr8.3:25534425-25534444 MS.gene87374:CDS 25.0%
! AATGTCTTTGATTAATTCTG+TGG + chr8.3:25534930-25534949 None:intergenic 25.0%
! AGAGTTAGAAGTTGTATATT+TGG - chr8.3:25534958-25534977 MS.gene87374:CDS 25.0%
! ATGATCATTACACATTGTTT+AGG - chr8.3:25534797-25534816 MS.gene87374:intron 25.0%
! CAACTTAACTGAAAAAATGA+TGG + chr8.3:25533817-25533836 None:intergenic 25.0%
! CAATGTGTAATGATCATTTA+AGG + chr8.3:25534794-25534813 None:intergenic 25.0%
! GCCAAAATTCAATCAAATTA+AGG + chr8.3:25535538-25535557 None:intergenic 25.0%
! GTGGTTTAATAACTGAAAAA+TGG + chr8.3:25534560-25534579 None:intergenic 25.0%
! TATAGAAAATTAGTCCCAAA+AGG + chr8.3:25533359-25533378 None:intergenic 25.0%
! TATGTCGAACATTATTCATA+GGG + chr8.3:25534245-25534264 None:intergenic 25.0%
! TGATTCTCTTTATAAATCCA+CGG + chr8.3:25535918-25535937 None:intergenic 25.0%
! TTATAAAGAGAATCAGAAGT+TGG - chr8.3:25535923-25535942 MS.gene87374:intron 25.0%
! TTTCTCTCACATGATTTAAT+TGG - chr8.3:25536122-25536141 MS.gene87374:intron 25.0%
! TTTGGATTAACAAGAGATAT+CGG + chr8.3:25534486-25534505 None:intergenic 25.0%
!! ACAACTTTTAGATGAAATAG+AGG + chr8.3:25533617-25533636 None:intergenic 25.0%
!! ATGTTTGAAACTAAAACTGA+AGG - chr8.3:25533408-25533427 MS.gene87374:intron 25.0%
!! CACAATAGGAATTTTTACTA+AGG + chr8.3:25536652-25536671 None:intergenic 25.0%
!! GATATTGATAGTATAGACTA+TGG - chr8.3:25534100-25534119 MS.gene87374:CDS 25.0%
!! GGTTTATTTCTTCTTCTAAT+AGG - chr8.3:25536143-25536162 MS.gene87374:intron 25.0%
!! TCTATATCCATTTGGATTTT+GGG - chr8.3:25533373-25533392 MS.gene87374:intron 25.0%
!! TGTTTGAAACTAAAACTGAA+GGG - chr8.3:25533409-25533428 MS.gene87374:intron 25.0%
!! TTCTATATCCATTTGGATTT+TGG - chr8.3:25533372-25533391 MS.gene87374:intron 25.0%
!!! AGTTTTAACCAATTATCAAC+TGG - chr8.3:25534645-25534664 MS.gene87374:CDS 25.0%
!!! CATCATTTTTTCAGTTAAGT+TGG - chr8.3:25533815-25533834 MS.gene87374:intron 25.0%
!!! GCCTTAATTTGATTGAATTT+TGG - chr8.3:25535534-25535553 MS.gene87374:intron 25.0%
AAATAAGTGACCTGAAATTC+TGG + chr8.3:25535968-25535987 None:intergenic 30.0%
AAATGACTGATTGAACCATA+CGG + chr8.3:25534328-25534347 None:intergenic 30.0%
AAGAAATGTCATGCAAAATC+CGG - chr8.3:25537272-25537291 MS.gene87374:intron 30.0%
AATATCACCACATTAAGAGA+TGG + chr8.3:25534086-25534105 None:intergenic 30.0%
AATTCTTATAGGGTTAGAGT+TGG + chr8.3:25536422-25536441 None:intergenic 30.0%
ACAAGCGGTTAATTCTTATA+GGG + chr8.3:25536432-25536451 None:intergenic 30.0%
ACCAAAATTACATCTTTGCA+TGG + chr8.3:25534728-25534747 None:intergenic 30.0%
ATATCACCACATTAAGAGAT+GGG + chr8.3:25534085-25534104 None:intergenic 30.0%
ATGTCGAACATTATTCATAG+GGG + chr8.3:25534244-25534263 None:intergenic 30.0%
ATTAATCCCATCTCTTAATG+TGG - chr8.3:25534076-25534095 MS.gene87374:CDS 30.0%
ATTCTTATAGGGTTAGAGTT+GGG + chr8.3:25536421-25536440 None:intergenic 30.0%
ATTGTGGAATTTATGCTTGA+GGG - chr8.3:25533275-25533294 MS.gene87374:intron 30.0%
ATTTCTTAACACTCTTTCTC+AGG + chr8.3:25537259-25537278 None:intergenic 30.0%
CCTAAAGTATGAATTTGATC+CGG - chr8.3:25534166-25534185 MS.gene87374:intron 30.0%
CTGGAATATGATCACATATT+CGG + chr8.3:25535638-25535657 None:intergenic 30.0%
GAGAATGTATCTACAATCTT+AGG + chr8.3:25537173-25537192 None:intergenic 30.0%
GGAATGTAGTAGATATAAAC+CGG - chr8.3:25535195-25535214 MS.gene87374:CDS 30.0%
GTATGTCGAACATTATTCAT+AGG + chr8.3:25534246-25534265 None:intergenic 30.0%
TAAACGCAATATGATACAAG+CGG + chr8.3:25536447-25536466 None:intergenic 30.0%
TACAAGCGGTTAATTCTTAT+AGG + chr8.3:25536433-25536452 None:intergenic 30.0%
TACTTTATGTCTCTTGATTG+TGG - chr8.3:25533259-25533278 MS.gene87374:intron 30.0%
TCTTCTTCTTCTTCTTCTTA+TGG - chr8.3:25533154-25533173 MS.gene87374:CDS 30.0%
TCTTTGATTAATTCTGTGGT+TGG + chr8.3:25534926-25534945 None:intergenic 30.0%
TGAGATTCATACACTTCAAA+AGG - chr8.3:25535174-25535193 MS.gene87374:CDS 30.0%
TGCTGTAGATGTTGAATATT+GGG + chr8.3:25535305-25535324 None:intergenic 30.0%
TGGAATATGATCACATATTC+GGG + chr8.3:25535637-25535656 None:intergenic 30.0%
TTCAGTACTCATCATTTGTT+TGG - chr8.3:25536932-25536951 MS.gene87374:intron 30.0%
TTCTATGTAATCACATGTGT+CGG + chr8.3:25533972-25533991 None:intergenic 30.0%
TTCTTCTTCTTATGGAAACT+CGG - chr8.3:25533162-25533181 MS.gene87374:CDS 30.0%
TTGCAAAATTTAACATGGCA+TGG - chr8.3:25533887-25533906 MS.gene87374:CDS 30.0%
TTGCTGTAGATGTTGAATAT+TGG + chr8.3:25535306-25535325 None:intergenic 30.0%
TTTCTTAACACTCTTTCTCA+GGG + chr8.3:25537258-25537277 None:intergenic 30.0%
! CTATATCCATTTGGATTTTG+GGG - chr8.3:25533374-25533393 MS.gene87374:intron 30.0%
! GAGAATGATAGTACTTTTCT+AGG - chr8.3:25535512-25535531 MS.gene87374:intron 30.0%
! GTTGTTGTTCAAATGCTTTA+CGG + chr8.3:25535006-25535025 None:intergenic 30.0%
! TAATAAGCTTTCTGAGGATA+TGG - chr8.3:25535665-25535684 MS.gene87374:intron 30.0%
! TCCATGCAAAGATGTAATTT+TGG - chr8.3:25534724-25534743 MS.gene87374:intron 30.0%
! TGATTAGAGAAGTGATTTTG+TGG - chr8.3:25533911-25533930 MS.gene87374:CDS 30.0%
! TGTACAATGTTTTCTTTGTC+TGG + chr8.3:25535226-25535245 None:intergenic 30.0%
! TTTTCGATATCTGATACCTA+AGG - chr8.3:25537328-25537347 MS.gene87374:intron 30.0%
!! AAAACACAAAGTGTTGTAAC+AGG + chr8.3:25534360-25534379 None:intergenic 30.0%
!! ACTCTTTTCACATTGTTTTG+TGG + chr8.3:25536189-25536208 None:intergenic 30.0%
!! ATTTTTACTAAGGGCTTGTT+TGG + chr8.3:25536642-25536661 None:intergenic 30.0%
!! TTAAGTTGGTATTATGAACG+TGG - chr8.3:25533829-25533848 MS.gene87374:intron 30.0%
!!! ACCTGTTTTAATATGTAGTG+TGG - chr8.3:25535429-25535448 MS.gene87374:intron 30.0%
!!! CTTCTTCTAATAGGCTTTTT+TGG - chr8.3:25536152-25536171 MS.gene87374:intron 30.0%
!!! GATTTTTCATGATGGGTTTT+AGG - chr8.3:25533041-25533060 MS.gene87374:CDS 30.0%
!!! TAATAGGCTTTTTTGGCTTA+TGG - chr8.3:25536159-25536178 MS.gene87374:intron 30.0%
!!! TACATCTGAACATCCTTTTT+TGG + chr8.3:25535140-25535159 None:intergenic 30.0%
!!! TCTTAGGTAGAAGTATTTTC+TGG + chr8.3:25537157-25537176 None:intergenic 30.0%
AACAGCTAATAAGCTTTCTG+AGG - chr8.3:25535659-25535678 MS.gene87374:intron 35.0%
AAGAGTCTTTCTTCTCTTGA+AGG - chr8.3:25536203-25536222 MS.gene87374:intron 35.0%
AAGGATTCAAGGAGTTTAGT+GGG - chr8.3:25535868-25535887 MS.gene87374:intron 35.0%
ACAAAATTCAAAGCTGGAGA+TGG - chr8.3:25536743-25536762 MS.gene87374:intron 35.0%
ACTATGGTTGATTATCGTTG+AGG - chr8.3:25534116-25534135 MS.gene87374:intron 35.0%
AGAAATGTCATGCAAAATCC+GGG - chr8.3:25537273-25537292 MS.gene87374:intron 35.0%
AGTTCTTGAAACACTCTCTT+CGG + chr8.3:25537083-25537102 None:intergenic 35.0%
ATCCAACTGTACATCAAAAG+AGG + chr8.3:25535832-25535851 None:intergenic 35.0%
ATGAGACAAACCTGAATCTT+TGG + chr8.3:25537195-25537214 None:intergenic 35.0%
ATTGAAGAAATTCCAACCTG+GGG + chr8.3:25534522-25534541 None:intergenic 35.0%
CACAATAACTTTATGCTTGC+CGG + chr8.3:25534767-25534786 None:intergenic 35.0%
CATTGAAGAAATTCCAACCT+GGG + chr8.3:25534523-25534542 None:intergenic 35.0%
CCGGATCAAATTCATACTTT+AGG + chr8.3:25534169-25534188 None:intergenic 35.0%
GAAAGTCAGCTAAAGTAGAT+AGG + chr8.3:25536276-25536295 None:intergenic 35.0%
GAACCATACGGCTAAAAATA+TGG + chr8.3:25534316-25534335 None:intergenic 35.0%
GATAATCCTTTCAACGTTGA+AGG - chr8.3:25535849-25535868 MS.gene87374:CDS 35.0%
GATACATTCTCCAAAGATTC+AGG - chr8.3:25537182-25537201 MS.gene87374:CDS 35.0%
GATCTCATAAGTCACACAAT+AGG + chr8.3:25536666-25536685 None:intergenic 35.0%
GATTGTGGAATTTATGCTTG+AGG - chr8.3:25533274-25533293 MS.gene87374:intron 35.0%
GCCACACTACATATTAAAAC+AGG + chr8.3:25535433-25535452 None:intergenic 35.0%
GTGAACTTGGAAAGAAAAAG+TGG + chr8.3:25534579-25534598 None:intergenic 35.0%
GTTGTACTGAACTTTATGAC+AGG - chr8.3:25537043-25537062 MS.gene87374:intron 35.0%
TACAGGCTGCATATAATGTT+GGG - chr8.3:25536312-25536331 MS.gene87374:intron 35.0%
TATCGAAAAGTGAAGTTGTG+TGG + chr8.3:25537317-25537336 None:intergenic 35.0%
TCAAGAACTAGAAGTTGCAA+AGG - chr8.3:25537094-25537113 MS.gene87374:intron 35.0%
TCAATTAGAAGACGTAGATC+CGG - chr8.3:25535989-25536008 MS.gene87374:intron 35.0%
TCATTGAAGAAATTCCAACC+TGG + chr8.3:25534524-25534543 None:intergenic 35.0%
TCGAAGACAAAATTCAAAGC+TGG - chr8.3:25536737-25536756 MS.gene87374:intron 35.0%
TCTTATGGAAACTCGGTATT+CGG - chr8.3:25533169-25533188 MS.gene87374:CDS 35.0%
TGTTGAATATTGGGATAACG+AGG + chr8.3:25535296-25535315 None:intergenic 35.0%
TTACAGGCTGCATATAATGT+TGG - chr8.3:25536311-25536330 MS.gene87374:intron 35.0%
TTCAAATGCTTTACGGTACA+AGG + chr8.3:25534999-25535018 None:intergenic 35.0%
TTGAATCCTTCAACGTTGAA+AGG + chr8.3:25535858-25535877 None:intergenic 35.0%
TTGTGGAATTTATGCTTGAG+GGG - chr8.3:25533276-25533295 MS.gene87374:intron 35.0%
TTGTTTGGACAAATACCTTC+TGG - chr8.3:25536947-25536966 MS.gene87374:intron 35.0%
TTTCAACGTTGAAGGATTCA+AGG - chr8.3:25535857-25535876 MS.gene87374:CDS 35.0%
! GAAAGCTTATTAGCTGTTTC+TGG + chr8.3:25535657-25535676 None:intergenic 35.0%
! GAGTCTGAATGTTTTTCTTC+TGG + chr8.3:25535253-25535272 None:intergenic 35.0%
! TCGATAAGTGCCTTTTCTAT+TGG - chr8.3:25535765-25535784 MS.gene87374:CDS 35.0%
!! TTGAGGGGTTGTTTATTTTC+TGG - chr8.3:25533291-25533310 MS.gene87374:intron 35.0%
!!! TCATGATGGGTTTTAGGAAT+GGG - chr8.3:25533047-25533066 MS.gene87374:CDS 35.0%
!!! TTCATGATGGGTTTTAGGAA+TGG - chr8.3:25533046-25533065 MS.gene87374:CDS 35.0%
AACAGTTGCTCCAGAATTTC+AGG - chr8.3:25535955-25535974 MS.gene87374:intron 40.0%
AATCCATTCTATGCTCTTCC+CGG + chr8.3:25537294-25537313 None:intergenic 40.0%
AATTAGAAGACGTAGATCCG+GGG - chr8.3:25535991-25536010 MS.gene87374:intron 40.0%
ACAGGCTGCATATAATGTTG+GGG - chr8.3:25536313-25536332 MS.gene87374:intron 40.0%
AGTACATTAGAGCCACGTTT+GGG - chr8.3:25537120-25537139 MS.gene87374:intron 40.0%
ATATCTGATACCTAAGGAGC+TGG - chr8.3:25537334-25537353 MS.gene87374:intron 40.0%
ATATGGCAGCTTTCCTGATA+AGG - chr8.3:25533520-25533539 MS.gene87374:CDS 40.0%
CAAGGCATAATCGTTCAAAG+AGG - chr8.3:25533087-25533106 MS.gene87374:CDS 40.0%
CAATTAGAAGACGTAGATCC+GGG - chr8.3:25535990-25536009 MS.gene87374:intron 40.0%
CTCAGTGTATTGCTCTTTAC+AGG - chr8.3:25536295-25536314 MS.gene87374:intron 40.0%
CTCTTTGAACGATTATGCCT+TGG + chr8.3:25533089-25533108 None:intergenic 40.0%
CTTCACTTTGCACTTTGTTC+AGG - chr8.3:25536803-25536822 MS.gene87374:intron 40.0%
CTTTCTCCCCAAAATCCAAA+TGG + chr8.3:25533383-25533402 None:intergenic 40.0%
GAAGGATTCAAGGAGTTTAG+TGG - chr8.3:25535867-25535886 MS.gene87374:intron 40.0%
GACTTCAGATCAAACAAAGC+TGG - chr8.3:25533577-25533596 MS.gene87374:intron 40.0%
GAGCTATCTTGAAGAGCTTA+TGG - chr8.3:25536534-25536553 MS.gene87374:intron 40.0%
GGTCAGATGCACATTAGAAA+AGG - chr8.3:25534446-25534465 MS.gene87374:CDS 40.0%
GTTGGTATTATGAACGTGGA+AGG - chr8.3:25533833-25533852 MS.gene87374:intron 40.0%
TATGAATTTGATCCGGTTCC+AGG - chr8.3:25534173-25534192 MS.gene87374:intron 40.0%
TATGTAATCACATGTGTCGG+TGG + chr8.3:25533969-25533988 None:intergenic 40.0%
TCCTGATAAGGAAACAGTGA+AGG - chr8.3:25533532-25533551 MS.gene87374:CDS 40.0%
TCCTTCACTGTTTCCTTATC+AGG + chr8.3:25533536-25533555 None:intergenic 40.0%
TCTTCGAAGAAAAGAACACG+CGG + chr8.3:25536724-25536743 None:intergenic 40.0%
TGATAAGGAAACAGTGAAGG+AGG - chr8.3:25533535-25533554 MS.gene87374:CDS 40.0%
TGATTAATTCTGTGGTTGGC+TGG + chr8.3:25534922-25534941 None:intergenic 40.0%
TTCTGCTAGGCTGATTACTT+TGG + chr8.3:25535604-25535623 None:intergenic 40.0%
! AAGCACTTGTGATGCTGTTT+CGG + chr8.3:25536589-25536608 None:intergenic 40.0%
! AAGGCACTTATCGAAGTACT+GGG + chr8.3:25535759-25535778 None:intergenic 40.0%
! AGACTTTTCGCTTTCTTCCA+CGG + chr8.3:25535059-25535078 None:intergenic 40.0%
! CTCCTCTTTTGATGTACAGT+TGG - chr8.3:25535827-25535846 MS.gene87374:CDS 40.0%
! TCGTAGAAAGCATGCATATG+TGG - chr8.3:25534051-25534070 MS.gene87374:intron 40.0%
!! AAAGGCACTTATCGAAGTAC+TGG + chr8.3:25535760-25535779 None:intergenic 40.0%
!! CATTTGGATTTTGGGGAGAA+AGG - chr8.3:25533381-25533400 MS.gene87374:intron 40.0%
!! GAGGAGTTATTTCTTAAGCC+TGG + chr8.3:25535813-25535832 None:intergenic 40.0%
!! GTCACACACCAGTTGATAAT+TGG + chr8.3:25534656-25534675 None:intergenic 40.0%
!! TGCACATTAGAAAAGGCACT+TGG - chr8.3:25534453-25534472 MS.gene87374:CDS 40.0%
!! TTTTCTTTGTCTGGAGTCTC+CGG + chr8.3:25535217-25535236 None:intergenic 40.0%
!!! CAGCCATATTTTTAGCCGTA+TGG - chr8.3:25534310-25534329 MS.gene87374:CDS 40.0%
!!! GTTTTAGGAATGGGACTTGA+AGG - chr8.3:25533056-25533075 MS.gene87374:CDS 40.0%
AAATGACACGACAATACCCC+AGG - chr8.3:25534503-25534522 MS.gene87374:CDS 45.0%
ACAAATACCTTCTGGCACTG+TGG - chr8.3:25536955-25536974 MS.gene87374:intron 45.0%
ACACTCTTTCTCAGGGATTC+AGG + chr8.3:25537251-25537270 None:intergenic 45.0%
ACTTACCTCCATCATGGACA+AGG + chr8.3:25535386-25535405 None:intergenic 45.0%
ACTTGAAGGACTCTTGCTCT+AGG + chr8.3:25535097-25535116 None:intergenic 45.0%
AGACCCACCTGTAACTAATC+CGG - chr8.3:25535722-25535741 MS.gene87374:intron 45.0%
AGCATGACTTACCTCCATCA+TGG + chr8.3:25535392-25535411 None:intergenic 45.0%
AGCTTTGCTCCGACTTCAAT+TGG + chr8.3:25533230-25533249 None:intergenic 45.0%
ATCAGCCTAGCAGAACATCT+CGG - chr8.3:25535609-25535628 MS.gene87374:intron 45.0%
ATTCCACTGTCCATTAGCAG+AGG - chr8.3:25533203-25533222 MS.gene87374:intron 45.0%
ATTGTATGTTCCACCTGTCC+AGG + chr8.3:25536398-25536417 None:intergenic 45.0%
CAAATACCTTCTGGCACTGT+GGG - chr8.3:25536956-25536975 MS.gene87374:intron 45.0%
CAGGCTGCATATAATGTTGG+GGG - chr8.3:25536314-25536333 MS.gene87374:intron 45.0%
CCTGAGGTCTCAACCAAAAA+AGG - chr8.3:25535124-25535143 MS.gene87374:CDS 45.0%
CTTACCTCCATCATGGACAA+GGG + chr8.3:25535385-25535404 None:intergenic 45.0%
GAGTACATTAGAGCCACGTT+TGG - chr8.3:25537119-25537138 MS.gene87374:intron 45.0%
GCAAAGTGAAGAAGAGACTC+AGG + chr8.3:25536794-25536813 None:intergenic 45.0%
GCCTTGATCGCCAATAGAAA+AGG + chr8.3:25535778-25535797 None:intergenic 45.0%
GCTTTGCTCCGACTTCAATT+GGG + chr8.3:25533229-25533248 None:intergenic 45.0%
TAACTTTCTTCCGCTTGCAG+TGG - chr8.3:25536696-25536715 MS.gene87374:CDS 45.0%
TAGTTGCACTGCATTCTGTG+AGG + chr8.3:25534209-25534228 None:intergenic 45.0%
TCACAGAATGCAGTGCAACT+AGG - chr8.3:25534208-25534227 MS.gene87374:CDS 45.0%
TGGAGGTAAGTCATGCTTCA+TGG - chr8.3:25535395-25535414 MS.gene87374:intron 45.0%
TTCAATTGGGCCTCTGCTAA+TGG + chr8.3:25533216-25533235 None:intergenic 45.0%
TTCTCAACCCTTGTCCATGA+TGG - chr8.3:25535375-25535394 MS.gene87374:intron 45.0%
! AATCCGGGAAGAGCATAGAA+TGG - chr8.3:25537288-25537307 MS.gene87374:intron 45.0%
! AGAACTGAGATAAGTACCGC+TGG + chr8.3:25536842-25536861 None:intergenic 45.0%
! CTGCTAATGGACAGTGGAAT+CGG + chr8.3:25533203-25533222 None:intergenic 45.0%
! GACTTGAAGGTGTGATTCCA+AGG - chr8.3:25533069-25533088 MS.gene87374:CDS 45.0%
! GATTCAGGTTTGTCTCATGC+TGG - chr8.3:25537197-25537216 MS.gene87374:CDS 45.0%
! GCCTTTTCTATTGGCGATCA+AGG - chr8.3:25535774-25535793 MS.gene87374:CDS 45.0%
! GTGATTTTGTGGCATGTCGA+AGG - chr8.3:25533922-25533941 MS.gene87374:CDS 45.0%
! TAATCACATGTGTCGGTGGT+GGG + chr8.3:25533965-25533984 None:intergenic 45.0%
!! ACCTCAACCATGGTGCTATA+TGG + chr8.3:25535894-25535913 None:intergenic 45.0%
!! ACGAGGAGAAGTTAGCTTTC+TGG - chr8.3:25536024-25536043 MS.gene87374:CDS 45.0%
!! CTTGCTCTAGGTGTTGTTAC+AGG + chr8.3:25535085-25535104 None:intergenic 45.0%
!! TCGAAGTACTGGGAGATGAA+AGG + chr8.3:25535749-25535768 None:intergenic 45.0%
!! TGGGGTATTGTCGTGTCATT+TGG + chr8.3:25534504-25534523 None:intergenic 45.0%
!!! CCTTTTTTGGTTGAGACCTC+AGG + chr8.3:25535127-25535146 None:intergenic 45.0%
!!! TTTTTGGTTGAGACCTCAGG+TGG + chr8.3:25535124-25535143 None:intergenic 45.0%
AATCCACGGTACCTCAACCA+TGG + chr8.3:25535904-25535923 None:intergenic 50.0%
AGCAGAGGCCCAATTGAAGT+CGG - chr8.3:25533218-25533237 MS.gene87374:intron 50.0%
AGGAAACCACTCTGATCCAG+CGG - chr8.3:25536823-25536842 MS.gene87374:intron 50.0%
CCTCAGGTGGAGAAACTTGA+AGG + chr8.3:25535111-25535130 None:intergenic 50.0%
GACCCACCTGTAACTAATCC+GGG - chr8.3:25535723-25535742 MS.gene87374:intron 50.0%
GCCATATAGCACCATGGTTG+AGG - chr8.3:25535890-25535909 MS.gene87374:intron 50.0%
GGACAAGGGTTGAGAATAGC+AGG + chr8.3:25535371-25535390 None:intergenic 50.0%
GGGATTCAGGTAGAGACTGT+TGG + chr8.3:25537238-25537257 None:intergenic 50.0%
GGTTTCTGCCATGTATGTGC+CGG - chr8.3:25534745-25534764 MS.gene87374:intron 50.0%
TATGCTTGCCGGCACATACA+TGG + chr8.3:25534756-25534775 None:intergenic 50.0%
TCAACCCTTGTCCATGATGG+AGG - chr8.3:25535378-25535397 MS.gene87374:intron 50.0%
TCCTCGTGTTTCAACTTCCC+CGG + chr8.3:25536011-25536030 None:intergenic 50.0%
TCGACATACGCTGAAGCAAG+AGG - chr8.3:25534257-25534276 MS.gene87374:CDS 50.0%
! AATCACATGTGTCGGTGGTG+GGG + chr8.3:25533964-25533983 None:intergenic 50.0%
! AGTCGGAGCAAAGCTCTAGT+TGG - chr8.3:25533235-25533254 MS.gene87374:intron 50.0%
! CATGTCGAAGGTGTAGTGTC+CGG - chr8.3:25533934-25533953 MS.gene87374:CDS 50.0%
! CCTTCAAGTTTCTCCACCTG+AGG - chr8.3:25535108-25535127 MS.gene87374:CDS 50.0%
! GTAATCACATGTGTCGGTGG+TGG + chr8.3:25533966-25533985 None:intergenic 50.0%
! GTCGGAGCAAAGCTCTAGTT+GGG - chr8.3:25533236-25533255 MS.gene87374:intron 50.0%
! TAAGTACCGCTGGATCAGAG+TGG + chr8.3:25536832-25536851 None:intergenic 50.0%
! TAGTGGGCCATATAGCACCA+TGG - chr8.3:25535884-25535903 MS.gene87374:intron 50.0%
!! GAAAGGCCCGGATTAGTTAC+AGG + chr8.3:25535732-25535751 None:intergenic 50.0%
!! GCTCTAGGTGTTGTTACAGG+AGG + chr8.3:25535082-25535101 None:intergenic 50.0%
AATGTCTCGTCCTGGACAGG+TGG - chr8.3:25536385-25536404 MS.gene87374:intron 55.0%
CCTGTCCAGGACGAGACATT+CGG + chr8.3:25536385-25536404 None:intergenic 55.0%
CTGTGAGGTAACCTGTGTCC+TGG + chr8.3:25534194-25534213 None:intergenic 55.0%
GACACGACAATACCCCAGGT+TGG - chr8.3:25534507-25534526 MS.gene87374:CDS 55.0%
GGTAACCTGTGTCCTGGAAC+CGG + chr8.3:25534188-25534207 None:intergenic 55.0%
GGTAGATGCAGATGCAGCCA+CGG + chr8.3:25535038-25535057 None:intergenic 55.0%
GTACTGGGAGATGAAAGGCC+CGG + chr8.3:25535744-25535763 None:intergenic 55.0%
GTCCTTGCGTATCCCAAACG+TGG + chr8.3:25537135-25537154 None:intergenic 55.0%
TCCGGGGAAGTTGAAACACG+AGG - chr8.3:25536007-25536026 MS.gene87374:CDS 55.0%
TGATCACCCACAGTGCCAGA+AGG + chr8.3:25536965-25536984 None:intergenic 55.0%
TTGATCCGGTTCCAGGACAC+AGG - chr8.3:25534180-25534199 MS.gene87374:intron 55.0%
TTGGCGATCAAGGCGACACT+TGG - chr8.3:25535784-25535803 MS.gene87374:CDS 55.0%
! AGCCACGTTTGGGATACGCA+AGG - chr8.3:25537130-25537149 MS.gene87374:intron 55.0%
! ATCACATGTGTCGGTGGTGG+GGG + chr8.3:25533963-25533982 None:intergenic 55.0%
!! AGGCCCGGATTAGTTACAGG+TGG + chr8.3:25535729-25535748 None:intergenic 55.0%
!! GGCCCGGATTAGTTACAGGT+GGG + chr8.3:25535728-25535747 None:intergenic 55.0%
!! GGGTACCGAGATGTTCTGCT+AGG + chr8.3:25535617-25535636 None:intergenic 55.0%
ACAACAACTATCCCCCGCCG+TGG - chr8.3:25535018-25535037 MS.gene87374:CDS 60.0%
ACACGCGGAACCACTGCAAG+CGG + chr8.3:25536709-25536728 None:intergenic 60.0%
AGATGCAGATGCAGCCACGG+CGG + chr8.3:25535035-25535054 None:intergenic 60.0%
CAAGGCGACACTTGGAGTCC+AGG - chr8.3:25535792-25535811 MS.gene87374:CDS 60.0%
CCGAATGTCTCGTCCTGGAC+AGG - chr8.3:25536382-25536401 MS.gene87374:intron 60.0%
GGCTGCATCTGCATCTACCG+TGG - chr8.3:25535039-25535058 MS.gene87374:CDS 60.0%
! GGGCCTCTGCTAATGGACAG+TGG + chr8.3:25533209-25533228 None:intergenic 60.0%
!! GCACCATGGTTGAGGTACCG+TGG - chr8.3:25535898-25535917 MS.gene87374:intron 60.0%
ATGCAGATGCAGCCACGGCG+GGG + chr8.3:25535033-25535052 None:intergenic 65.0%
GATGCAGATGCAGCCACGGC+GGG + chr8.3:25535034-25535053 None:intergenic 65.0%
!! GGGTGCCGAATGTCTCGTCC+TGG - chr8.3:25536377-25536396 MS.gene87374:intron 65.0%
TGCAGATGCAGCCACGGCGG+GGG + chr8.3:25535032-25535051 None:intergenic 70.0%
!! GTGTCGGTGGTGGGGGACAC+CGG + chr8.3:25533956-25533975 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 25532920 25537364 25532920 ID=MS.gene87374
chr8.3 mRNA 25532920 25537364 25532920 ID=MS.gene87374.t1;Parent=MS.gene87374
chr8.3 exon 25537355 25537364 25537355 ID=MS.gene87374.t1.exon1;Parent=MS.gene87374.t1
chr8.3 CDS 25537355 25537364 25537355 ID=cds.MS.gene87374.t1;Parent=MS.gene87374.t1
chr8.3 exon 25537176 25537221 25537176 ID=MS.gene87374.t1.exon2;Parent=MS.gene87374.t1
chr8.3 CDS 25537176 25537221 25537176 ID=cds.MS.gene87374.t1;Parent=MS.gene87374.t1
chr8.3 exon 25536686 25536755 25536686 ID=MS.gene87374.t1.exon3;Parent=MS.gene87374.t1
chr8.3 CDS 25536686 25536755 25536686 ID=cds.MS.gene87374.t1;Parent=MS.gene87374.t1
chr8.3 exon 25536006 25536089 25536006 ID=MS.gene87374.t1.exon4;Parent=MS.gene87374.t1
chr8.3 CDS 25536006 25536089 25536006 ID=cds.MS.gene87374.t1;Parent=MS.gene87374.t1
chr8.3 exon 25535760 25535876 25535760 ID=MS.gene87374.t1.exon5;Parent=MS.gene87374.t1
chr8.3 CDS 25535760 25535876 25535760 ID=cds.MS.gene87374.t1;Parent=MS.gene87374.t1
chr8.3 exon 25534885 25535361 25534885 ID=MS.gene87374.t1.exon6;Parent=MS.gene87374.t1
chr8.3 CDS 25534885 25535361 25534885 ID=cds.MS.gene87374.t1;Parent=MS.gene87374.t1
chr8.3 exon 25534208 25534708 25534208 ID=MS.gene87374.t1.exon7;Parent=MS.gene87374.t1
chr8.3 CDS 25534208 25534708 25534208 ID=cds.MS.gene87374.t1;Parent=MS.gene87374.t1
chr8.3 exon 25534060 25534119 25534060 ID=MS.gene87374.t1.exon8;Parent=MS.gene87374.t1
chr8.3 CDS 25534060 25534119 25534060 ID=cds.MS.gene87374.t1;Parent=MS.gene87374.t1
chr8.3 exon 25533881 25533967 25533881 ID=MS.gene87374.t1.exon9;Parent=MS.gene87374.t1
chr8.3 CDS 25533881 25533967 25533881 ID=cds.MS.gene87374.t1;Parent=MS.gene87374.t1
chr8.3 exon 25533440 25533568 25533440 ID=MS.gene87374.t1.exon10;Parent=MS.gene87374.t1
chr8.3 CDS 25533440 25533568 25533440 ID=cds.MS.gene87374.t1;Parent=MS.gene87374.t1
chr8.3 exon 25532920 25533219 25532920 ID=MS.gene87374.t1.exon11;Parent=MS.gene87374.t1
chr8.3 CDS 25532920 25533219 25532920 ID=cds.MS.gene87374.t1;Parent=MS.gene87374.t1
Gene Sequence

>MS.gene87374

ATGTTCTTAGGTAAGTAGTTTTGATTATGTTTTGCTTTGTTTTTTTTTTTTTTTTGGTATTTTCAGCAATTGTTGTTGTTTGTTTATGTTACATGTGATTAGTTTTAGTTGAAATAACTTTGATTTTTCATGATGGGTTTTAGGAATGGGACTTGAAGGTGTGATTCCAAGGCATAATCGTTCAAAGAGGTGATGCTCTATTTAATGTGTTTATGTTCTCTTGTTTTTTTTTCTTCTTCTTCTTCTTCTTCTTATGGAAACTCGGTATTCGGTCTAATGACCGATTCCACTGTCCATTAGCAGAGGCCCAATTGAAGTCGGAGCAAAGCTCTAGTTGGGTACTTTATGTCTCTTGATTGTGGAATTTATGCTTGAGGGGTTGTTTATTTTCTGGAAAATAAAGCTTTCACATTTATGTCAAAATTGTTATTTTTTTCCTTTTGGGACTAATTTTCTATATCCATTTGGATTTTGGGGAGAAAGGTGTCATGTTTGAAACTAAAACTGAAGGGTATCTCAAAATACAGTTTTTATTATATGAATTAATGAATGATTATCATAACTTATCATATATTAATTGTGTTTTACTGTTTTTATATTATATGGCAGCTTTCCTGATAAGGAAACAGTGAAGGAGGATTGTTCAGATAGCGTTGAGACTTCAGATCAAACAAAGCTGGTATAATAAATCATTCCTCTATTTCATCTAAAAGTTGTCATAACTTTTTTCTAGCTTTTTTAAATTGGGAATTTAAAGGTACAATTCTTATAAATACATTGAGTTTAATTTTGATATATTGTCTGTCAGTGTAAAAAATTTTACAGTCAAATAATCACAATTAATTGTATATGTGGTTTTTAAAATAGTTTTAATTAAAGCATGGTGCTTAAATGCCATCATTTTTTCAGTTAAGTTGGTATTATGAACGTGGAAGGAAGCCCAAAATTTTCTGAATGTTTTTTTATTTTGCAAAATTTAACATGGCATGGATGATTAGAGAAGTGATTTTGTGGCATGTCGAAGGTGTAGTGTCCGGTGTCCCCCACCACCGACACATGTGATTACATAGAATTTCTTCCATTTTTTCAAATTATTACTGGTATCTACGTGTAAATGTCTGTGTCAGTGCTTCGTAGAAAGCATGCATATGTGGTAATTAATCCCATCTCTTAATGTGGTGATATTGATAGTATAGACTATGGTTGATTATCGTTGAGGCAATTATTTATAAGCAAGATTTTCATGCCTAAAGTATGAATTTGATCCGGTTCCAGGACACAGGTTACCTCACAGAATGCAGTGCAACTAGGAAAAAACAAACCCCTATGAATAATGTTCGACATACGCTGAAGCAAGAGGTACTGTATCGCAACTGATAAATACAATATGCAGCCATATTTTTAGCCGTATGGTTCAATCAGTCATTTTGTTTTAATCCTGTTACAACACTTTGTGTTTTTCAATTATCAATGTCTATTTTGTTGCAGATTTTACAATTAGAGAAAAGACTAGAAGATCAATTTAAGGTCAGATGCACATTAGAAAAGGCACTTGGATACAGACCGATATCTCTTGTTAATCCAAATGACACGACAATACCCCAGGTTGGAATTTCTTCAATGAATTATAACAATCACCATTTTTCAGTTATTAAACCACTTTTTCTTTCCAAGTTCACTATTAATAAGATTAGTGAAAGAATGTGTAATTTCTTCGATATCGACAGTTTTAACCAATTATCAACTGGTGTGTGACAGATCCAGAATTAATGTACTAAATTGTTTTTTGAAATAACATTGATTTTCCATGCAAAGATGTAATTTTGGTTTCTGCCATGTATGTGCCGGCAAGCATAAAGTTATTGTGCAACCCTTAAATGATCATTACACATTGTTTAGGAGTCTATTATAAGTTTGAAATATTTGGTACGACTTTCTTGTTCATGTTCATGTTCATGTTCTTGTATTGCTATTTGTCTGATAAGTTTTTTCTTTTACTCCAGCCAACCACAGAATTAATCAAAGACATTGCAGTTTTAGAGTTAGAAGTTGTATATTTGGAACAATATCTTCTCTCCTTGTACCGTAAAGCATTTGAACAACAACTATCCCCCGCCGTGGCTGCATCTGCATCTACCGTGGAAGAAAGCGAAAAGTCTCCTCCTGTAACAACACCTAGAGCAAGAGTCCTTCAAGTTTCTCCACCTGAGGTCTCAACCAAAAAAGGATGTTCAGATGTACAATGTATTGATCATGAGATTCATACACTTCAAAAGGAATGTAGTAGATATAAACCGGAGACTCCAGACAAAGAAAACATTGTACATCATCCAGAAGAAAAACATTCAGACTCTAGCGTGCATCGATGTCACTCCTCGTTATCCCAATATTCAACATCTACAGCAAAAGTATCTTCTCAAGAAGAAGAGTTAACTGATTCTCTACGCGCCTGCTATTCTCAACCCTTGTCCATGATGGAGGTAAGTCATGCTTCATGGAAAATTCTTATACCTGTTTTAATATGTAGTGTGGCTCTTAATTAATCAGTTCTGTTATGAAGTTTTGTTATGAACTATATGAGCATTAATAGCAGAGAATGATAGTACTTTTCTAGGCCTTAATTTGATTGAATTTTGGCTGACTTTGTTTTCTACAGTATGCTGAAAGTGTTGATACTTCAACCAAAGTAATCAGCCTAGCAGAACATCTCGGTACCCGAATATGTGATCATATTCCAGAAACAGCTAATAAGCTTTCTGAGGATATGGTTAAATGTATATCAGCTATATATTACAAACTTGCAGACCCACCTGTAACTAATCCGGGCCTTTCATCTCCCAGTACTTCGATAAGTGCCTTTTCTATTGGCGATCAAGGCGACACTTGGAGTCCAGGCTTAAGAAATAACTCCTCTTTTGATGTACAGTTGGATAATCCTTTCAACGTTGAAGGATTCAAGGAGTTTAGTGGGCCATATAGCACCATGGTTGAGGTACCGTGGATTTATAAAGAGAATCAGAAGTTGGCAGATACAGAACAGTTGCTCCAGAATTTCAGGTCACTTATTTGTCAATTAGAAGACGTAGATCCGGGGAAGTTGAAACACGAGGAGAAGTTAGCTTTCTGGATCAACGTACACAATGCTTTAGTGATGCATGTAATTATCATTTCTCAAAACCATGTTACCCTTTAATACATTTCATTTCTCTCACATGATTTAATTGGTTTATTTCTTCTTCTAATAGGCTTTTTTGGCTTATGGAATTCCACAAAACAATGTGAAAAGAGTCTTTCTTCTCTTGAAGGTAAAAAGCAATACTAGCATTTTTAGTGAATTTGAGTATGAAACTTAGCCTATCTACTTTAGCTGACTTTCTCAGTGTATTGCTCTTTACAGGCTGCATATAATGTTGGGGGTCATACAGTCAGCGCAGACACAATACAAAATACTATACTAGGGTGCCGAATGTCTCGTCCTGGACAGGTGGAACATACAATCCCAACTCTAACCCTATAAGAATTAACCGCTTGTATCATATTGCGTTTATCATATAAGTCCTTATGTGTAAATTATTTATATGACATAAGATAAAATAAAGTCAAATTGTTTTCTTGAGCTATCTTGAAGAGCTTATGGACATGTCATTAGTTGTTTCAATAAGCTCTCCGAAACAGCATCACAAGTGCTTATGTTTATAGATAAGCTCAAATAAGCTAATCCAAACAAGCCCTTAGTAAAAATTCCTATTGTGTGACTTATGAGATCTTCTTGTAAGTAACTTTCTTCCGCTTGCAGTGGTTCCGCGTGTTCTTTTCTTCGAAGACAAAATTCAAAGCTGGAGATGGACGACAAGCATATGCAATCAAACATCCTGAGTCTCTTCTTCACTTTGCACTTTGTTCAGGAAACCACTCTGATCCAGCGGTACTTATCTCAGTTCTCGTATATATAATGTGATTTTCATTTGATTATGACATCTCCATTTTTATAATACCTGATGCTATCTTTACATTCAGTACTCATCATTTGTTTGGACAAATACCTTCTGGCACTGTGGGTGATCAAGTTAACAAAACGAACAATAACTGTTTTTTACATGTTTAATGTAAGTGAGTTGTTCATGTTGTACTGAACTTTATGACAGGTACGTGTATATACACCGAAGAGAGTGTTTCAAGAACTAGAAGTTGCAAAGGAAGAGTACATTAGAGCCACGTTTGGGATACGCAAGGACCAGAAAATACTTCTACCTAAGATTGTAGATACATTCTCCAAAGATTCAGGTTTGTCTCATGCTGGTCTTATAGAGATGATCCAACAGTCTCTACCTGAATCCCTGAGAAAGAGTGTTAAGAAATGTCATGCAAAATCCGGGAAGAGCATAGAATGGATTCCACACAACTTCACTTTTCGATATCTGATACCTAAGGAGCTGGTTAAATAA
Protein sequence

>MS.gene87374.t1

MFLGMGLEGVIPRHNRSKSFPDKETVKEDCSDSVETSDQTKLDTGYLTECSATRKKQTPMNNVRHTLKQEILQLEKRLEDQFKVRCTLEKALGYRPISLVNPNDTTIPQPTTELIKDIAVLELEVVYLEQYLLSLYRKAFEQQLSPAVAASASTVEESEKSPPVTTPRARVLQVSPPEVSTKKGCSDVQCIDHEIHTLQKECSRYKPETPDKENIVHHPEEKHSDSSVHRCHSSLSQYSTSTAKVSSQEEELTDSLRACYSQPLSMMEYAESVDTSTKVISLAEHLGTRICDHIPETANKLSEDMVKCISAIYYKLADPPVTNPGLSSPSTSISAFSIGDQGDTWSPGLRNNSSFDVQLDNPFNVEGFKEFSGPYSTMVEVPWIYKENQKLADTEQLLQNFRSLICQLEDVDPGKLKHEEKLAFWINVHNALVMHAFLAYGIPQNNVKRVFLLLKAAYNVGGHTVSADTIQNTILGCRMSRPGQWFRVFFSSKTKFKAGDGRQAYAIKHPESLLHFALCSGNHSDPAVRVYTPKRVFQELEVAKEEYIRATFGIRKDQKILLPKIVDTFSKDSGLSHAGLIEMIQQSLPESLRKSVKKCHAKSGKSIEWIPHNFTFRYLIPKELVK