Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87448.t1 | XP_003629450.1 | 99.6 | 243 | 1 | 0 | 1 | 243 | 2 | 244 | 4.40E-131 | 477.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87448.t1 | D3YWP0 | 27.7 | 191 | 114 | 5 | 46 | 236 | 51 | 217 | 1.8e-11 | 71.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87448.t1 | G7LES3 | 99.6 | 243 | 1 | 0 | 1 | 243 | 2 | 244 | 3.2e-131 | 477.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051838 | MS.gene87448 | -0.820967 | 5.18E-53 | -1.69E-46 |
| MS.gene056387 | MS.gene87448 | -0.806831 | 6.79E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene87448 | -0.80173 | 7.84E-49 | -1.69E-46 |
| MS.gene058418 | MS.gene87448 | 0.801214 | 1.00E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87448.t1 | MTR_8g077610 | 99.588 | 243 | 1 | 0 | 1 | 243 | 2 | 244 | 0.0 | 498 |
| MS.gene87448.t1 | MTR_4g057605 | 39.000 | 100 | 56 | 2 | 86 | 181 | 67 | 165 | 1.31e-16 | 78.6 |
| MS.gene87448.t1 | MTR_6g068940 | 35.878 | 131 | 82 | 2 | 86 | 216 | 115 | 243 | 1.36e-14 | 71.6 |
| MS.gene87448.t1 | MTR_2g090740 | 25.444 | 169 | 119 | 3 | 51 | 217 | 33 | 196 | 5.86e-14 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87448.t1 | AT5G49560 | 63.636 | 220 | 77 | 2 | 25 | 241 | 45 | 264 | 1.34e-97 | 286 |
| MS.gene87448.t1 | AT3G50850 | 60.000 | 225 | 81 | 2 | 25 | 240 | 23 | 247 | 6.83e-89 | 263 |
| MS.gene87448.t1 | AT1G08125 | 41.584 | 101 | 53 | 2 | 86 | 181 | 74 | 173 | 3.87e-15 | 73.9 |
| MS.gene87448.t1 | AT1G08125 | 41.584 | 101 | 53 | 2 | 86 | 181 | 67 | 166 | 5.06e-15 | 73.6 |
| MS.gene87448.t1 | AT1G73320 | 34.351 | 131 | 84 | 2 | 86 | 216 | 148 | 276 | 1.26e-13 | 69.7 |
| MS.gene87448.t1 | AT4G35987 | 34.375 | 128 | 68 | 5 | 86 | 211 | 130 | 243 | 2.58e-12 | 65.5 |
Find 89 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACGTGAGGGAGGTCGGTT+AGG | 0.316269 | 8.3:+26674061 | None:intergenic |
| TCATATGAAGAGATGGAAAA+AGG | 0.321690 | 8.3:-26673806 | MS.gene87448:CDS |
| TGGTGGTGGGGTTGAGGCGG+TGG | 0.326124 | 8.3:+26674199 | None:intergenic |
| AATGGGTTTGAAGTAGTTCT+TGG | 0.354771 | 8.3:+26674328 | None:intergenic |
| TTGGGTTGTACGGTGGGGAA+TGG | 0.361161 | 8.3:+26674363 | None:intergenic |
| TGGGTTGTACGGTGGGGAAT+GGG | 0.374840 | 8.3:+26674364 | None:intergenic |
| ATTGGATCGAATGGAGGAAA+TGG | 0.384082 | 8.3:+26674310 | None:intergenic |
| AAGGTCTCTCCTTCCAGCTC+TGG | 0.385465 | 8.3:-26674257 | MS.gene87448:CDS |
| AACCGTTGATTGAAACGTTA+AGG | 0.389612 | 8.3:-26673867 | MS.gene87448:CDS |
| CATGTTGATGCTCCTTGTAA+TGG | 0.391114 | 8.3:-26673733 | MS.gene87448:CDS |
| TTCTTGGTTAGGTAGTAGAT+TGG | 0.399959 | 8.3:+26674344 | None:intergenic |
| GGCTGGTGGTGGGGTTGAGG+CGG | 0.411611 | 8.3:+26674196 | None:intergenic |
| CGAGGATGCGTGGTGGGGTG+TGG | 0.423189 | 8.3:+26674148 | None:intergenic |
| AAGGTTGATGTTGATTAAGA+AGG | 0.425856 | 8.3:-26673848 | MS.gene87448:CDS |
| TTGGATCGAATGGAGGAAAT+GGG | 0.432200 | 8.3:+26674311 | None:intergenic |
| TCTTGGTTAGGTAGTAGATT+GGG | 0.434781 | 8.3:+26674345 | None:intergenic |
| AGGTGGCGGCGGGCCAGAGC+TGG | 0.444077 | 8.3:+26674244 | None:intergenic |
| CTCGAACTCGGCTCCGGCAC+CGG | 0.450903 | 8.3:-26674129 | MS.gene87448:CDS |
| TACGTTTGCATCCCTTAGGT+GGG | 0.452080 | 8.3:-26673974 | MS.gene87448:CDS |
| GAATGGGTTTGTTTCTTCGT+CGG | 0.457936 | 8.3:+26674380 | None:intergenic |
| GAGTTGAGAGGACGGTTGAG+AGG | 0.459642 | 8.3:+26674172 | None:intergenic |
| AGCGAATGGTGACCGTTGAT+TGG | 0.465364 | 8.3:+26674292 | None:intergenic |
| GACGTGAGGGAGGTCGGTTA+GGG | 0.465449 | 8.3:+26674062 | None:intergenic |
| AGCGACTATGCCGACGATGC+CGG | 0.470723 | 8.3:+26674110 | None:intergenic |
| CGAGTTCGAGGATGCGTGGT+GGG | 0.471711 | 8.3:+26674142 | None:intergenic |
| TCCGCGTTGAATTTGAGATT+CGG | 0.471852 | 8.3:+26674036 | None:intergenic |
| AACCTTAACGTTTCAATCAA+CGG | 0.475348 | 8.3:+26673865 | None:intergenic |
| CCTTGTAATGGTTCTAGAGT+TGG | 0.477461 | 8.3:-26673721 | MS.gene87448:CDS |
| GTTTGAAGTAGTTCTTGGTT+AGG | 0.484820 | 8.3:+26674333 | None:intergenic |
| GCTGCTGACGTGGAAATGAT+TGG | 0.487077 | 8.3:-26673946 | MS.gene87448:CDS |
| AGTAGATTGGGTTGTACGGT+GGG | 0.490201 | 8.3:+26674357 | None:intergenic |
| AGTTGAGAGGACGGTTGAGA+GGG | 0.490310 | 8.3:+26674173 | None:intergenic |
| AGTGACGAGTGAGGTGGCGG+CGG | 0.491669 | 8.3:+26674233 | None:intergenic |
| GTGTTACGTTTGCATCCCTT+AGG | 0.501593 | 8.3:-26673978 | MS.gene87448:CDS |
| GTTTGATGTTGTGATAGCTT+CGG | 0.502712 | 8.3:-26673917 | MS.gene87448:CDS |
| TTGAGATTCGGAACGACGTG+AGG | 0.511339 | 8.3:+26674048 | None:intergenic |
| CGGTGCCGGAGCCGAGTTCG+AGG | 0.513484 | 8.3:+26674130 | None:intergenic |
| AGAGCTGGAAGGAGAGACCT+TGG | 0.513855 | 8.3:+26674259 | None:intergenic |
| GGCTCCGGCACCGGCATCGT+CGG | 0.521008 | 8.3:-26674120 | MS.gene87448:CDS |
| CAGCAGCATGACCCCACCTA+AGG | 0.524506 | 8.3:+26673962 | None:intergenic |
| CGCATCCTCGAACTCGGCTC+CGG | 0.529068 | 8.3:-26674135 | MS.gene87448:CDS |
| GAGAGTGACGAGTGAGGTGG+CGG | 0.530040 | 8.3:+26674230 | None:intergenic |
| TAGTAGATTGGGTTGTACGG+TGG | 0.531896 | 8.3:+26674356 | None:intergenic |
| TTACGTTTGCATCCCTTAGG+TGG | 0.534207 | 8.3:-26673975 | MS.gene87448:CDS |
| GTGACGAGTGAGGTGGCGGC+GGG | 0.536697 | 8.3:+26674234 | None:intergenic |
| TATGCCGACGATGCCGGTGC+CGG | 0.538683 | 8.3:+26674116 | None:intergenic |
| GGTTGAGGCGGTGGTTGTCG+AGG | 0.542097 | 8.3:+26674208 | None:intergenic |
| GAGCTGGAAGGAGAGACCTT+GGG | 0.542111 | 8.3:+26674260 | None:intergenic |
| GGAAGCTAATGCAGAAGCTG+TGG | 0.551048 | 8.3:-26674016 | MS.gene87448:CDS |
| GGTTACGTTTGTTCCGAGTG+TGG | 0.553433 | 8.3:+26674083 | None:intergenic |
| AGGTAGTAGATTGGGTTGTA+CGG | 0.554183 | 8.3:+26674353 | None:intergenic |
| GCAGAAGCTGTGGGGTCCAA+CGG | 0.558756 | 8.3:-26674006 | MS.gene87448:CDS |
| GAAGCTAATGCAGAAGCTGT+GGG | 0.560553 | 8.3:-26674015 | MS.gene87448:CDS |
| TGAGATTCGGAACGACGTGA+GGG | 0.576809 | 8.3:+26674049 | None:intergenic |
| AGCAGCATGACCCCACCTAA+GGG | 0.580922 | 8.3:+26673963 | None:intergenic |
| CGGAACGACGTGAGGGAGGT+CGG | 0.581279 | 8.3:+26674056 | None:intergenic |
| ATAGTCGCTGCCGCCACACT+CGG | 0.581970 | 8.3:-26674096 | MS.gene87448:CDS |
| GGAAGGAGAGACCTTGGGAT+GGG | 0.584360 | 8.3:+26674265 | None:intergenic |
| GGTGTGGAGAGTTGAGAGGA+CGG | 0.595390 | 8.3:+26674164 | None:intergenic |
| TGATGGCTCATATGAAGAGA+TGG | 0.595555 | 8.3:-26673813 | MS.gene87448:CDS |
| CCACCACGCATCCTCGAACT+CGG | 0.597166 | 8.3:-26674141 | MS.gene87448:CDS |
| TGTTGTGATAGCTTCGGATG+TGG | 0.597436 | 8.3:-26673911 | MS.gene87448:CDS |
| TGGAAGGAGAGACCTTGGGA+TGG | 0.597890 | 8.3:+26674264 | None:intergenic |
| CCTCCATTCGATCCAATCAA+CGG | 0.598452 | 8.3:-26674304 | MS.gene87448:CDS |
| GAAGGAGATTGTGTTTGTGA+TGG | 0.598982 | 8.3:-26673830 | MS.gene87448:CDS |
| GGCGGCGGGCCAGAGCTGGA+AGG | 0.605814 | 8.3:+26674248 | None:intergenic |
| CCAACTCTAGAACCATTACA+AGG | 0.607697 | 8.3:+26673721 | None:intergenic |
| ACGTTTGCATCCCTTAGGTG+GGG | 0.608540 | 8.3:-26673973 | MS.gene87448:CDS |
| TGACCGTTGATTGGATCGAA+TGG | 0.614537 | 8.3:+26674301 | None:intergenic |
| GAGTTCGAGGATGCGTGGTG+GGG | 0.614565 | 8.3:+26674143 | None:intergenic |
| TTGAGAGGACGGTTGAGAGG+GGG | 0.617661 | 8.3:+26674175 | None:intergenic |
| CCGTTGATTGGATCGAATGG+AGG | 0.620603 | 8.3:+26674304 | None:intergenic |
| GTGGGGTCATGCTGCTGACG+TGG | 0.622445 | 8.3:-26673956 | MS.gene87448:CDS |
| ATTCGCTCACTCCCATCCCA+AGG | 0.623289 | 8.3:-26674276 | MS.gene87448:CDS |
| CCGAGTTCGAGGATGCGTGG+TGG | 0.629594 | 8.3:+26674141 | None:intergenic |
| GAGCCGAGTTCGAGGATGCG+TGG | 0.630016 | 8.3:+26674138 | None:intergenic |
| GTAGATTGGGTTGTACGGTG+GGG | 0.630154 | 8.3:+26674358 | None:intergenic |
| GTTGAGAGGACGGTTGAGAG+GGG | 0.632028 | 8.3:+26674174 | None:intergenic |
| AAACGTAACACTACCACCGT+TGG | 0.633263 | 8.3:+26673990 | None:intergenic |
| TACGTTTGTTCCGAGTGTGG+CGG | 0.635092 | 8.3:+26674086 | None:intergenic |
| GCTGACGTGGAAATGATTGG+AGG | 0.636522 | 8.3:-26673943 | MS.gene87448:CDS |
| TTGGGATGGGAGTGAGCGAA+TGG | 0.644190 | 8.3:+26674278 | None:intergenic |
| GATTCGGAACGACGTGAGGG+AGG | 0.646270 | 8.3:+26674052 | None:intergenic |
| GTGGGGTGTGGAGAGTTGAG+AGG | 0.653293 | 8.3:+26674160 | None:intergenic |
| GAAGCTGTGGGGTCCAACGG+TGG | 0.664465 | 8.3:-26674003 | MS.gene87448:CDS |
| GTCGAGGAGAGTGACGAGTG+AGG | 0.666536 | 8.3:+26674224 | None:intergenic |
| GAGGAGAGTGACGAGTGAGG+TGG | 0.668981 | 8.3:+26674227 | None:intergenic |
| AAGCTAATGCAGAAGCTGTG+GGG | 0.711870 | 8.3:-26674014 | MS.gene87448:CDS |
| TCCGAATCTCAAATTCAACG+CGG | 0.805092 | 8.3:-26674037 | MS.gene87448:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTGTTTATCGTTTTGTT+GGG | - | chr8.3:26674372-26674391 | MS.gene87448:CDS | 25.0% |
| AACCTTAACGTTTCAATCAA+CGG | + | chr8.3:26674206-26674225 | None:intergenic | 30.0% | |
| TCATATGAAGAGATGGAAAA+AGG | - | chr8.3:26674262-26674281 | MS.gene87448:CDS | 30.0% | |
| !! | AAGGTTGATGTTGATTAAGA+AGG | - | chr8.3:26674220-26674239 | MS.gene87448:CDS | 30.0% |
| !!! | GTTGTTGTTTATCGTTTTGT+TGG | - | chr8.3:26674371-26674390 | MS.gene87448:CDS | 30.0% |
| !!! | GTTTGTTTTTTAAGAAAGCG+AGG | - | chr8.3:26674288-26674307 | MS.gene87448:CDS | 30.0% |
| GTTTGATGTTGTGATAGCTT+CGG | - | chr8.3:26674151-26674170 | MS.gene87448:CDS | 35.0% | |
| TCTTGGTTAGGTAGTAGATT+GGG | + | chr8.3:26673726-26673745 | None:intergenic | 35.0% | |
| TTCTTGGTTAGGTAGTAGAT+TGG | + | chr8.3:26673727-26673746 | None:intergenic | 35.0% | |
| ! | AACCGTTGATTGAAACGTTA+AGG | - | chr8.3:26674201-26674220 | MS.gene87448:CDS | 35.0% |
| ! | AATGGGTTTGAAGTAGTTCT+TGG | + | chr8.3:26673743-26673762 | None:intergenic | 35.0% |
| ! | GTTTGAAGTAGTTCTTGGTT+AGG | + | chr8.3:26673738-26673757 | None:intergenic | 35.0% |
| ATTGGATCGAATGGAGGAAA+TGG | + | chr8.3:26673761-26673780 | None:intergenic | 40.0% | |
| CATGTTGATGCTCCTTGTAA+TGG | - | chr8.3:26674335-26674354 | MS.gene87448:CDS | 40.0% | |
| GAAGGAGATTGTGTTTGTGA+TGG | - | chr8.3:26674238-26674257 | MS.gene87448:CDS | 40.0% | |
| TCCGAATCTCAAATTCAACG+CGG | - | chr8.3:26674031-26674050 | MS.gene87448:CDS | 40.0% | |
| TGATGGCTCATATGAAGAGA+TGG | - | chr8.3:26674255-26674274 | MS.gene87448:CDS | 40.0% | |
| TTGGATCGAATGGAGGAAAT+GGG | + | chr8.3:26673760-26673779 | None:intergenic | 40.0% | |
| ! | AGGTAGTAGATTGGGTTGTA+CGG | + | chr8.3:26673718-26673737 | None:intergenic | 40.0% |
| ! | GAATGGGTTTGTTTCTTCGT+CGG | + | chr8.3:26673691-26673710 | None:intergenic | 40.0% |
| ! | TCCGCGTTGAATTTGAGATT+CGG | + | chr8.3:26674035-26674054 | None:intergenic | 40.0% |
| !! | CCAACTCTAGAACCATTACA+AGG | + | chr8.3:26674350-26674369 | None:intergenic | 40.0% |
| !! | CCTTGTAATGGTTCTAGAGT+TGG | - | chr8.3:26674347-26674366 | MS.gene87448:CDS | 40.0% |
| AAACGTAACACTACCACCGT+TGG | + | chr8.3:26674081-26674100 | None:intergenic | 45.0% | |
| AAGCTAATGCAGAAGCTGTG+GGG | - | chr8.3:26674054-26674073 | MS.gene87448:CDS | 45.0% | |
| CCTCCATTCGATCCAATCAA+CGG | - | chr8.3:26673764-26673783 | MS.gene87448:CDS | 45.0% | |
| GAAGCTAATGCAGAAGCTGT+GGG | - | chr8.3:26674053-26674072 | MS.gene87448:CDS | 45.0% | |
| GTGTTACGTTTGCATCCCTT+AGG | - | chr8.3:26674090-26674109 | MS.gene87448:CDS | 45.0% | |
| TACGTTTGCATCCCTTAGGT+GGG | - | chr8.3:26674094-26674113 | MS.gene87448:CDS | 45.0% | |
| TGTTGTGATAGCTTCGGATG+TGG | - | chr8.3:26674157-26674176 | MS.gene87448:CDS | 45.0% | |
| TTACGTTTGCATCCCTTAGG+TGG | - | chr8.3:26674093-26674112 | MS.gene87448:CDS | 45.0% | |
| ! | AGTAGATTGGGTTGTACGGT+GGG | + | chr8.3:26673714-26673733 | None:intergenic | 45.0% |
| ! | TAGTAGATTGGGTTGTACGG+TGG | + | chr8.3:26673715-26673734 | None:intergenic | 45.0% |
| ! | TGACCGTTGATTGGATCGAA+TGG | + | chr8.3:26673770-26673789 | None:intergenic | 45.0% |
| ACGTTTGCATCCCTTAGGTG+GGG | - | chr8.3:26674095-26674114 | MS.gene87448:CDS | 50.0% | |
| AGCGAATGGTGACCGTTGAT+TGG | + | chr8.3:26673779-26673798 | None:intergenic | 50.0% | |
| AGTTGAGAGGACGGTTGAGA+GGG | + | chr8.3:26673898-26673917 | None:intergenic | 50.0% | |
| GCTGACGTGGAAATGATTGG+AGG | - | chr8.3:26674125-26674144 | MS.gene87448:CDS | 50.0% | |
| GCTGCTGACGTGGAAATGAT+TGG | - | chr8.3:26674122-26674141 | MS.gene87448:CDS | 50.0% | |
| GGAAGCTAATGCAGAAGCTG+TGG | - | chr8.3:26674052-26674071 | MS.gene87448:CDS | 50.0% | |
| GGTTACGTTTGTTCCGAGTG+TGG | + | chr8.3:26673988-26674007 | None:intergenic | 50.0% | |
| TACGTTTGTTCCGAGTGTGG+CGG | + | chr8.3:26673985-26674004 | None:intergenic | 50.0% | |
| TGAGATTCGGAACGACGTGA+GGG | + | chr8.3:26674022-26674041 | None:intergenic | 50.0% | |
| TTGAGATTCGGAACGACGTG+AGG | + | chr8.3:26674023-26674042 | None:intergenic | 50.0% | |
| ! | CCGTTGATTGGATCGAATGG+AGG | + | chr8.3:26673767-26673786 | None:intergenic | 50.0% |
| ! | GTAGATTGGGTTGTACGGTG+GGG | + | chr8.3:26673713-26673732 | None:intergenic | 50.0% |
| AAGGTCTCTCCTTCCAGCTC+TGG | - | chr8.3:26673811-26673830 | MS.gene87448:CDS | 55.0% | |
| AGAGCTGGAAGGAGAGACCT+TGG | + | chr8.3:26673812-26673831 | None:intergenic | 55.0% | |
| AGCAGCATGACCCCACCTAA+GGG | + | chr8.3:26674108-26674127 | None:intergenic | 55.0% | |
| ATTCGCTCACTCCCATCCCA+AGG | - | chr8.3:26673792-26673811 | MS.gene87448:CDS | 55.0% | |
| GAGCTGGAAGGAGAGACCTT+GGG | + | chr8.3:26673811-26673830 | None:intergenic | 55.0% | |
| GAGTTGAGAGGACGGTTGAG+AGG | + | chr8.3:26673899-26673918 | None:intergenic | 55.0% | |
| GGAAGGAGAGACCTTGGGAT+GGG | + | chr8.3:26673806-26673825 | None:intergenic | 55.0% | |
| GGTGTGGAGAGTTGAGAGGA+CGG | + | chr8.3:26673907-26673926 | None:intergenic | 55.0% | |
| GTTGAGAGGACGGTTGAGAG+GGG | + | chr8.3:26673897-26673916 | None:intergenic | 55.0% | |
| TGGAAGGAGAGACCTTGGGA+TGG | + | chr8.3:26673807-26673826 | None:intergenic | 55.0% | |
| TGGGTTGTACGGTGGGGAAT+GGG | + | chr8.3:26673707-26673726 | None:intergenic | 55.0% | |
| TTGAGAGGACGGTTGAGAGG+GGG | + | chr8.3:26673896-26673915 | None:intergenic | 55.0% | |
| TTGGGATGGGAGTGAGCGAA+TGG | + | chr8.3:26673793-26673812 | None:intergenic | 55.0% | |
| ! | TTGGGTTGTACGGTGGGGAA+TGG | + | chr8.3:26673708-26673727 | None:intergenic | 55.0% |
| AGCGACTATGCCGACGATGC+CGG | + | chr8.3:26673961-26673980 | None:intergenic | 60.0% | |
| ATAGTCGCTGCCGCCACACT+CGG | - | chr8.3:26673972-26673991 | MS.gene87448:CDS | 60.0% | |
| CAGCAGCATGACCCCACCTA+AGG | + | chr8.3:26674109-26674128 | None:intergenic | 60.0% | |
| CCACCACGCATCCTCGAACT+CGG | - | chr8.3:26673927-26673946 | MS.gene87448:CDS | 60.0% | |
| CGAGTTCGAGGATGCGTGGT+GGG | + | chr8.3:26673929-26673948 | None:intergenic | 60.0% | |
| GACGTGAGGGAGGTCGGTTA+GGG | + | chr8.3:26674009-26674028 | None:intergenic | 60.0% | |
| GAGAGTGACGAGTGAGGTGG+CGG | + | chr8.3:26673841-26673860 | None:intergenic | 60.0% | |
| GAGGAGAGTGACGAGTGAGG+TGG | + | chr8.3:26673844-26673863 | None:intergenic | 60.0% | |
| GAGTTCGAGGATGCGTGGTG+GGG | + | chr8.3:26673928-26673947 | None:intergenic | 60.0% | |
| GATTCGGAACGACGTGAGGG+AGG | + | chr8.3:26674019-26674038 | None:intergenic | 60.0% | |
| GCAGAAGCTGTGGGGTCCAA+CGG | - | chr8.3:26674062-26674081 | MS.gene87448:CDS | 60.0% | |
| GTCGAGGAGAGTGACGAGTG+AGG | + | chr8.3:26673847-26673866 | None:intergenic | 60.0% | |
| GTGGGGTGTGGAGAGTTGAG+AGG | + | chr8.3:26673911-26673930 | None:intergenic | 60.0% | |
| CCGAGTTCGAGGATGCGTGG+TGG | + | chr8.3:26673930-26673949 | None:intergenic | 65.0% | |
| CGACGTGAGGGAGGTCGGTT+AGG | + | chr8.3:26674010-26674029 | None:intergenic | 65.0% | |
| CGCATCCTCGAACTCGGCTC+CGG | - | chr8.3:26673933-26673952 | MS.gene87448:CDS | 65.0% | |
| CGGAACGACGTGAGGGAGGT+CGG | + | chr8.3:26674015-26674034 | None:intergenic | 65.0% | |
| GAAGCTGTGGGGTCCAACGG+TGG | - | chr8.3:26674065-26674084 | MS.gene87448:CDS | 65.0% | |
| GAGCCGAGTTCGAGGATGCG+TGG | + | chr8.3:26673933-26673952 | None:intergenic | 65.0% | |
| GGTTGAGGCGGTGGTTGTCG+AGG | + | chr8.3:26673863-26673882 | None:intergenic | 65.0% | |
| GTGGGGTCATGCTGCTGACG+TGG | - | chr8.3:26674112-26674131 | MS.gene87448:CDS | 65.0% | |
| TATGCCGACGATGCCGGTGC+CGG | + | chr8.3:26673955-26673974 | None:intergenic | 65.0% | |
| ! | AGTGACGAGTGAGGTGGCGG+CGG | + | chr8.3:26673838-26673857 | None:intergenic | 65.0% |
| ! | GTTGAGAGGGGGCTGGTGGT+GGG | + | chr8.3:26673885-26673904 | None:intergenic | 65.0% |
| ! | TTGAGAGGGGGCTGGTGGTG+GGG | + | chr8.3:26673884-26673903 | None:intergenic | 65.0% |
| CTCGAACTCGGCTCCGGCAC+CGG | - | chr8.3:26673939-26673958 | MS.gene87448:CDS | 70.0% | |
| GACGGTTGAGAGGGGGCTGG+TGG | + | chr8.3:26673889-26673908 | None:intergenic | 70.0% | |
| GAGGACGGTTGAGAGGGGGC+TGG | + | chr8.3:26673892-26673911 | None:intergenic | 70.0% | |
| ! | CGAGGATGCGTGGTGGGGTG+TGG | + | chr8.3:26673923-26673942 | None:intergenic | 70.0% |
| ! | GGTTGAGAGGGGGCTGGTGG+TGG | + | chr8.3:26673886-26673905 | None:intergenic | 70.0% |
| ! | GTGACGAGTGAGGTGGCGGC+GGG | + | chr8.3:26673837-26673856 | None:intergenic | 70.0% |
| !! | GGCTGGTGGTGGGGTTGAGG+CGG | + | chr8.3:26673875-26673894 | None:intergenic | 70.0% |
| !! | TGGTGGTGGGGTTGAGGCGG+TGG | + | chr8.3:26673872-26673891 | None:intergenic | 70.0% |
| ! | CGGTGCCGGAGCCGAGTTCG+AGG | + | chr8.3:26673941-26673960 | None:intergenic | 75.0% |
| !! | GGCTCCGGCACCGGCATCGT+CGG | - | chr8.3:26673948-26673967 | MS.gene87448:CDS | 75.0% |
| !! | GGGGGCTGGTGGTGGGGTTG+AGG | + | chr8.3:26673878-26673897 | None:intergenic | 75.0% |
| ! | GGCGGCGGGCCAGAGCTGGA+AGG | + | chr8.3:26673823-26673842 | None:intergenic | 80.0% |
| !! | AGGTGGCGGCGGGCCAGAGC+TGG | + | chr8.3:26673827-26673846 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 26673678 | 26674412 | 26673678 | ID=MS.gene87448 |
| chr8.3 | mRNA | 26673678 | 26674412 | 26673678 | ID=MS.gene87448.t1;Parent=MS.gene87448 |
| chr8.3 | exon | 26673678 | 26674412 | 26673678 | ID=MS.gene87448.t1.exon1;Parent=MS.gene87448.t1 |
| chr8.3 | CDS | 26673678 | 26674412 | 26673678 | ID=cds.MS.gene87448.t1;Parent=MS.gene87448.t1 |
| Gene Sequence |
| Protein sequence |
