AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene88377

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88377.t1 MTR_2g081070 97.672 1203 27 1 1 1202 1 1203 0.0 2440
MS.gene88377.t1 MTR_8g464480 67.577 1209 353 11 1 1201 1 1178 0.0 1631
MS.gene88377.t1 MTR_1g114540 55.244 1211 421 20 48 1199 7 1155 0.0 1242
MS.gene88377.t1 MTR_1g038793 57.629 1088 406 13 132 1199 113 1165 0.0 1225
MS.gene88377.t1 MTR_3g105200 41.916 835 440 17 138 942 3 822 0.0 627
MS.gene88377.t1 MTR_3g105200 41.916 835 440 17 138 942 3 822 0.0 626
MS.gene88377.t1 MTR_4g125690 42.839 782 415 15 143 907 12 778 0.0 617
MS.gene88377.t1 MTR_7g099290 38.080 948 500 20 143 1022 12 940 0.0 612
MS.gene88377.t1 MTR_1g037500 40.574 801 443 15 134 917 5 789 0.0 612
MS.gene88377.t1 MTR_1g070280 40.237 845 459 16 143 967 12 830 0.0 611
MS.gene88377.t1 MTR_1g070280 40.237 845 459 16 143 967 12 830 0.0 610
MS.gene88377.t1 MTR_1g070280 40.237 845 459 16 143 967 12 830 0.0 610
MS.gene88377.t1 MTR_7g115430 37.006 962 545 22 143 1062 12 954 0.0 605
MS.gene88377.t1 MTR_1g080600 40.655 824 443 19 143 937 12 818 0.0 603
MS.gene88377.t1 MTR_1g070400 40.145 827 453 16 143 942 10 821 0.0 600
MS.gene88377.t1 MTR_1g015620 40.288 834 450 16 138 942 3 817 0.0 598
MS.gene88377.t1 MTR_2g062660 34.745 1039 574 26 143 1135 12 992 2.45e-175 559
MS.gene88377.t1 MTR_1g070280 40.280 643 349 11 314 947 1 617 2.61e-150 475
MS.gene88377.t1 MTR_6g007010 76.471 119 12 2 134 250 8 112 2.66e-54 184
MS.gene88377.t1 MTR_1g069290 30.573 471 258 12 621 1037 1 456 2.42e-51 197
MS.gene88377.t1 MTR_1g023610 32.110 218 95 7 985 1195 39 210 9.82e-25 103
MS.gene88377.t1 MTR_7g026950 78.182 55 12 0 510 564 31 85 3.33e-23 96.3
MS.gene88377.t1 MTR_1g069305 41.667 144 76 4 430 568 1 141 4.00e-23 97.4
MS.gene88377.t1 MTR_2g066850 35.714 126 77 3 350 473 580 703 6.34e-18 90.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88377.t1 AT5G54280 61.066 1238 420 17 1 1196 1 1218 0.0 1524
MS.gene88377.t1 AT5G54280 64.327 1040 345 12 170 1196 2 1028 0.0 1377
MS.gene88377.t1 AT4G27370 56.917 1200 441 15 10 1198 1 1135 0.0 1304
MS.gene88377.t1 AT4G27370 56.917 1200 441 15 10 1198 1 1135 0.0 1304
MS.gene88377.t1 AT4G27370 56.667 1200 444 15 10 1198 1 1135 0.0 1299
MS.gene88377.t1 AT4G27370 56.177 1198 451 13 10 1198 1 1133 0.0 1289
MS.gene88377.t1 AT3G19960 57.059 1190 429 14 53 1199 13 1163 0.0 1286
MS.gene88377.t1 AT3G19960 57.059 1190 429 14 53 1199 13 1163 0.0 1286
MS.gene88377.t1 AT3G19960 57.059 1190 429 14 53 1199 13 1163 0.0 1286
MS.gene88377.t1 AT1G50360 58.455 1100 397 14 125 1199 86 1150 0.0 1244
MS.gene88377.t1 AT3G19960 53.219 1227 428 20 53 1199 13 1173 0.0 1167
MS.gene88377.t1 AT3G19960 63.761 872 279 8 53 898 13 873 0.0 1103
MS.gene88377.t1 AT1G04160 41.388 836 440 18 143 948 12 827 0.0 634
MS.gene88377.t1 AT1G04160 41.388 836 440 18 143 948 12 827 0.0 634
MS.gene88377.t1 AT5G43900 41.176 833 443 17 144 948 73 886 0.0 631
MS.gene88377.t1 AT5G43900 41.176 833 443 17 144 948 13 826 0.0 631
MS.gene88377.t1 AT5G43900 41.205 830 444 17 144 948 73 883 0.0 625
MS.gene88377.t1 AT1G17580 43.646 779 405 16 143 904 11 772 0.0 617
MS.gene88377.t1 AT2G20290 40.413 824 449 18 144 941 12 819 0.0 613
MS.gene88377.t1 AT2G20290 40.413 824 449 18 144 941 12 819 0.0 613
MS.gene88377.t1 AT2G20290 40.413 824 449 18 144 941 12 819 0.0 613
MS.gene88377.t1 AT2G20290 40.170 824 451 18 144 941 23 830 0.0 612
MS.gene88377.t1 AT2G33240 40.745 832 448 17 143 957 11 814 0.0 611
MS.gene88377.t1 AT2G33240 40.745 832 448 17 143 957 29 832 0.0 610
MS.gene88377.t1 AT2G33240 40.745 832 448 17 143 957 34 837 0.0 610
MS.gene88377.t1 AT2G33240 40.745 832 448 17 143 957 29 832 0.0 610
MS.gene88377.t1 AT2G33240 40.745 832 448 17 143 957 29 832 0.0 610
MS.gene88377.t1 AT2G33240 40.745 832 448 17 143 957 29 832 0.0 610
MS.gene88377.t1 AT1G54560 41.688 782 424 15 143 907 15 781 0.0 610
MS.gene88377.t1 AT2G33240 40.745 832 448 17 143 957 29 832 0.0 610
MS.gene88377.t1 AT1G54560 41.688 782 424 15 143 907 12 778 0.0 610
MS.gene88377.t1 AT1G04600 39.952 841 462 16 143 967 12 825 0.0 609
MS.gene88377.t1 AT1G08730 41.560 782 425 15 143 907 20 786 0.0 607
MS.gene88377.t1 AT1G08730 41.560 782 425 15 143 907 12 778 0.0 607
MS.gene88377.t1 AT2G31900 40.253 790 443 13 143 917 12 787 0.0 606
MS.gene88377.t1 AT2G31900 40.253 790 443 13 143 917 12 787 0.0 606
MS.gene88377.t1 AT2G31900 40.253 790 443 13 143 917 12 787 0.0 606
MS.gene88377.t1 AT4G33200 37.759 964 532 23 138 1055 11 952 0.0 598
MS.gene88377.t1 AT4G33200 37.759 964 532 23 138 1055 11 952 0.0 598
MS.gene88377.t1 AT4G33200 37.759 964 532 23 138 1055 11 952 0.0 598
MS.gene88377.t1 AT4G33200 37.759 964 532 23 138 1055 11 952 0.0 597
MS.gene88377.t1 AT5G20490 36.440 955 510 18 143 1033 12 933 0.0 592
MS.gene88377.t1 AT5G20490 36.440 955 510 18 143 1033 11 932 0.0 591
MS.gene88377.t1 AT4G28710 37.381 947 512 22 144 1022 12 945 0.0 586
MS.gene88377.t1 AT3G58160 39.795 779 438 14 143 905 10 773 0.0 569
MS.gene88377.t1 AT3G58160 39.795 779 438 14 143 905 10 773 0.0 568
MS.gene88377.t1 AT3G58160 39.795 779 438 14 143 905 10 773 0.0 568
MS.gene88377.t1 AT3G58160 39.795 779 438 14 143 905 10 773 0.0 567
MS.gene88377.t1 AT3G58160 39.795 779 438 14 143 905 10 773 0.0 567
MS.gene88377.t1 AT5G20490 37.000 900 471 17 197 1033 1 867 5.20e-178 564
MS.gene88377.t1 AT2G31900 40.683 703 380 11 256 947 14 690 3.54e-168 537
MS.gene88377.t1 AT2G31900 37.823 542 316 9 383 917 2 529 4.09e-112 381
MS.gene88377.t1 AT2G33240 33.639 327 190 7 635 957 2 305 3.28e-42 169
MS.gene88377.t1 AT1G42680 86.076 79 10 1 282 360 56 133 1.58e-36 136

Find 255 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTTGACGTTGGCCTTGC+TGG 0.183195 2.4:+17269067 None:intergenic
TTTAAGGTTGATGGTGAAAA+TGG 0.211037 2.4:-17269007 MS.gene88377:CDS
CAAGCTAATCCTCGCTTTAA+AGG 0.231247 2.4:-17263966 MS.gene88377:CDS
AGAATACAAGATGCGATTAA+AGG 0.245729 2.4:-17259610 MS.gene88377:CDS
TAAGAAGTTGATGTTGGATT+TGG 0.253940 2.4:-17268945 MS.gene88377:CDS
AGATGCTCGCTGCAATATTA+TGG 0.259871 2.4:-17265420 MS.gene88377:CDS
TGTTTCTTATTTCATCAAAA+AGG 0.268800 2.4:-17268783 MS.gene88377:intron
TTCAAAGATGTACAGATTTA+CGG 0.269792 2.4:-17267458 MS.gene88377:CDS
GCTCAAATGTTGTGGAGTTT+TGG 0.271208 2.4:-17262583 MS.gene88377:CDS
GGATCTTCACCTCATCTTAA+AGG 0.273421 2.4:-17266008 MS.gene88377:intron
GAGAGATGGCAACGGTAGTT+TGG 0.289387 2.4:-17259784 MS.gene88377:CDS
CGAGGACAATCAAGAGTGTT+TGG 0.289765 2.4:-17264300 MS.gene88377:CDS
AAGCCAACTTGATACATTTC+AGG 0.292503 2.4:+17262336 None:intergenic
GGCTCCACCTTCACCGGAAT+TGG 0.300241 2.4:-17268816 MS.gene88377:CDS
AAGTTCTGACCTTATGATAA+TGG 0.301427 2.4:+17267220 None:intergenic
CGGCCTTGACAACCCGTCTT+TGG 0.307079 2.4:+17260445 None:intergenic
ATAAGTATCCTTGACATTTA+CGG 0.312486 2.4:-17264704 MS.gene88377:CDS
AATGCCGGCGGTAGGTCTTT+AGG 0.317541 2.4:+17269091 None:intergenic
CTCTTGGTGGTGGCAGTTGT+GGG 0.318968 2.4:-17266985 MS.gene88377:CDS
CCCAGTCCCCACTTTCCTCT+TGG 0.321736 2.4:+17267896 None:intergenic
ATTGGAGGATAAGAGAAAAT+TGG 0.321972 2.4:-17261424 MS.gene88377:CDS
TAAGTATCCTTGACATTTAC+GGG 0.327882 2.4:-17264703 MS.gene88377:CDS
GTCATCATAAACAGTTCTAT+TGG 0.328126 2.4:-17266188 MS.gene88377:intron
ACGATTATGTCTCTGCTTAC+AGG 0.331775 2.4:-17267433 MS.gene88377:CDS
CATAGAAGGAAGGGAAGTTT+TGG 0.339922 2.4:-17268971 MS.gene88377:CDS
CCGAATGCTAAGCAACTTCC+TGG 0.341223 2.4:-17262636 MS.gene88377:CDS
GAAATTGCAAGAAGGAAATA+TGG 0.342390 2.4:-17261049 MS.gene88377:CDS
GGATTGAGAGCAATTAAAAT+TGG 0.345264 2.4:+17267482 None:intergenic
GTAAATGTCAAGGATACTTA+TGG 0.353475 2.4:+17264706 None:intergenic
TAAAGCGAGGATTAGCTTGC+AGG 0.353796 2.4:+17263970 None:intergenic
AAGACTAAAATTACGGAATT+CGG 0.366640 2.4:-17259577 MS.gene88377:CDS
TCCTCGCTTTAAAGGGGAAT+GGG 0.369735 2.4:-17263958 MS.gene88377:CDS
TCCACACCCTCTAAAATATC+AGG 0.375830 2.4:+17267684 None:intergenic
GGAAGAATACAGTCAACTTC+TGG 0.376912 2.4:-17267875 MS.gene88377:CDS
ACATTGTCATCTTCCAATTC+CGG 0.382161 2.4:+17268803 None:intergenic
TTCTGTATGCAGAGTAAAGC+TGG 0.383304 2.4:-17267506 MS.gene88377:intron
TCTATGCCAGTTTGTTTGAC+TGG 0.383915 2.4:-17264784 MS.gene88377:CDS
CTTCAAAGGTGTGCTGCAAC+CGG 0.384863 2.4:+17259839 None:intergenic
CTGCCGCAATGTCAATGTTT+TGG 0.385989 2.4:+17265146 None:intergenic
TTCCACAGAAACTTCATGTT+TGG 0.389916 2.4:-17267928 MS.gene88377:intron
CAGGTGCTGCCTAAGTTTGT+TGG 0.392173 2.4:+17263989 None:intergenic
ACCAAACTGTATCTTCGAAC+AGG 0.392713 2.4:-17262312 MS.gene88377:CDS
CTCCACAACATTTGAGCTGC+TGG 0.400144 2.4:+17262589 None:intergenic
TGGAGGTTGTTAGGATTTCA+AGG 0.400822 2.4:-17262563 MS.gene88377:CDS
TTGGTCGAGGTAAGAACAAC+AGG 0.401176 2.4:-17259702 MS.gene88377:CDS
AAGCTAATCCTCGCTTTAAA+GGG 0.401383 2.4:-17263965 MS.gene88377:CDS
GAAATTCATTTCAGCACAAC+GGG 0.403303 2.4:-17266381 MS.gene88377:CDS
AGAGATGGCAACGGTAGTTT+GGG 0.403486 2.4:-17259783 MS.gene88377:CDS
AATGTTATACTAGAAGCTTT+TGG 0.403624 2.4:-17266938 MS.gene88377:CDS
GCTCTTGGTGGTGGCAGTTG+TGG 0.405488 2.4:-17266986 MS.gene88377:CDS
AATTTGATTGCTTCTGAGAC+TGG 0.411484 2.4:+17263156 None:intergenic
TCGGAGTCAAAATCTGCCTT+TGG 0.413389 2.4:-17260481 MS.gene88377:CDS
CCAGGAAGTTGCTTAGCATT+CGG 0.415055 2.4:+17262636 None:intergenic
GAAATGAAATGGGGCATAGA+AGG 0.415419 2.4:-17268985 MS.gene88377:CDS
AAAATTACGGAATTCGGAAA+TGG 0.417420 2.4:-17259571 MS.gene88377:CDS
CGATGAAGATGCAAGAGCTT+TGG 0.421592 2.4:-17259721 MS.gene88377:CDS
TAATTCGTGGGTGGTTGGTT+CGG 0.422170 2.4:-17260868 MS.gene88377:CDS
CATTACGATAAACTTAAGAT+TGG 0.426715 2.4:-17261345 MS.gene88377:CDS
CTCTGTGGCTCCACCTTCAC+CGG 0.428130 2.4:-17268822 MS.gene88377:CDS
GTTGGCCTTGCTGGCAATGC+CGG 0.429220 2.4:+17269076 None:intergenic
TGGAAATAAGAAGTTGATGT+TGG 0.429284 2.4:-17268951 MS.gene88377:CDS
TATAGGTCTACTCTCTCTAT+TGG 0.429287 2.4:-17264054 MS.gene88377:CDS
GAGTTTCCGCAGTTCTTCAA+TGG 0.430416 2.4:+17259659 None:intergenic
ACCTCCTCGCCGGCGGCAAC+CGG 0.430425 2.4:+17269044 None:intergenic
GGTGAAAATGGAAATGAAAT+GGG 0.431190 2.4:-17268995 MS.gene88377:CDS
TTACGGGTTTGAGTCATTCC+AGG 0.433300 2.4:-17264687 MS.gene88377:intron
GTAAATCTGTACATCTTTGA+AGG 0.433854 2.4:+17267460 None:intergenic
GTTAATAAATCACTTGAAGT+TGG 0.436680 2.4:-17264749 MS.gene88377:CDS
TTCCCCGCACATAGGGGCTC+TGG 0.437131 2.4:-17263135 MS.gene88377:CDS
GCAGCTTATAATGAAATGAT+AGG 0.440487 2.4:-17267368 MS.gene88377:CDS
TCTTGATGTGTCATTCTAGT+AGG 0.440596 2.4:+17262531 None:intergenic
ATTGTCCTCGAAATCTACTT+TGG 0.441585 2.4:+17264313 None:intergenic
TGATAGTATCCTTGCCAGCT+TGG 0.442922 2.4:+17265169 None:intergenic
TACAGTGGTGAGAGTGGAGC+TGG 0.443781 2.4:-17267049 MS.gene88377:intron
TACTTAGCTGCTCTTGGTGG+TGG 0.443981 2.4:-17266995 MS.gene88377:CDS
CGAAAGCAAGACTAAAATTA+CGG 0.443984 2.4:-17259584 MS.gene88377:CDS
GTAAATGTGCAGAAGCCTAT+AGG 0.444175 2.4:-17264071 MS.gene88377:intron
TTCAGTGTTTGTCATTATGC+AGG 0.444455 2.4:-17263927 MS.gene88377:CDS
CCCTGTTCGAAGATACAGTT+TGG 0.444556 2.4:+17262311 None:intergenic
ATTTAGATATTTATATTCGC+TGG 0.450712 2.4:+17265666 None:intergenic
TGGTGAAAATGGAAATGAAA+TGG 0.454692 2.4:-17268996 MS.gene88377:CDS
CCAAGAGGAAAGTGGGGACT+GGG 0.454854 2.4:-17267896 MS.gene88377:CDS
TGAAAATATTGAGGAGATAG+AGG 0.458878 2.4:-17260993 MS.gene88377:CDS
GATTATATTGTAGTTGTTCG+TGG 0.459943 2.4:-17261073 MS.gene88377:intron
GCATCAGTTTCACTCTCAAA+TGG 0.461522 2.4:-17267845 MS.gene88377:CDS
TCCGAGGATGCTACATCAAT+GGG 0.462911 2.4:-17259882 MS.gene88377:CDS
TCTCAGGACTATGAAATTGA+TGG 0.463644 2.4:-17264347 MS.gene88377:intron
TACAAGCCAGTCAAACAAAC+TGG 0.465090 2.4:+17264778 None:intergenic
TCTTCTGAAATAACCACATA+AGG 0.465752 2.4:+17268917 None:intergenic
CGCAGTTCTTCAATGGAATG+TGG 0.467860 2.4:+17259666 None:intergenic
AATAGAGAGAGTAGACCTAT+AGG 0.468654 2.4:+17264056 None:intergenic
AGAGTTGTTCAACTGGCTAA+TGG 0.470379 2.4:-17266068 MS.gene88377:CDS
CTCGCTGCAATATTATGGTT+GGG 0.471921 2.4:-17265415 MS.gene88377:CDS
CTGAGACTGGTTAAGCGTCT+TGG 0.472790 2.4:+17263169 None:intergenic
AAACTCAAACACAGGTTTGA+AGG 0.473624 2.4:-17259642 MS.gene88377:CDS
ATTCAAGTTAATGCATCAGT+TGG 0.475718 2.4:-17262694 MS.gene88377:CDS
AACTAAAACAATTTGAGAAA+AGG 0.475726 2.4:-17260374 MS.gene88377:CDS
TTTAAGATACATCCTGAGAA+TGG 0.476283 2.4:-17260821 MS.gene88377:CDS
ATAAACAGTTCTATTGGAAA+AGG 0.476484 2.4:-17266182 MS.gene88377:intron
CAGGTTGTGTATGATACAAA+TGG 0.477610 2.4:-17263278 MS.gene88377:CDS
TTGCTGGCAATGCCGGCGGT+AGG 0.478298 2.4:+17269083 None:intergenic
ACCAAGAGGAAAGTGGGGAC+TGG 0.479895 2.4:-17267897 MS.gene88377:CDS
CTTTAAAGGGGAATGGGGAA+AGG 0.480701 2.4:-17263952 MS.gene88377:CDS
GTGCTGCAACCGGGTGTTCG+AGG 0.482115 2.4:+17259849 None:intergenic
AGAGGAAAATGCCGAGTTGA+GGG 0.484509 2.4:-17260400 MS.gene88377:CDS
TCTAAAATATCAGGATTAGC+TGG 0.485172 2.4:+17267693 None:intergenic
TTCCGAGGATGCTACATCAA+TGG 0.485547 2.4:-17259883 MS.gene88377:CDS
TAAATCAATCCATTATCATA+AGG 0.486712 2.4:-17267229 MS.gene88377:intron
GCAACAGAAGAATCATCAAC+AGG 0.487099 2.4:+17268845 None:intergenic
TATGACCAAAGTAGATTTCG+AGG 0.487142 2.4:-17264318 MS.gene88377:CDS
AGTGTTAGATCGGTTGCCCT+TGG 0.487744 2.4:+17264014 None:intergenic
TATTTCTTCTGAAAATATTG+AGG 0.488471 2.4:-17261002 MS.gene88377:CDS
ATGCAATACTTAGCTGCTCT+TGG 0.490125 2.4:-17267001 MS.gene88377:CDS
AATCCAGAGCCCCTATGTGC+GGG 0.491570 2.4:+17263132 None:intergenic
ACCCATCAGCGTCGCAGCAC+TGG 0.492011 2.4:+17265236 None:intergenic
AATCAAATTCCCCGCACATA+GGG 0.494093 2.4:-17263142 MS.gene88377:CDS
AAGAAGGAAATATGGTGTTA+TGG 0.494103 2.4:-17261041 MS.gene88377:CDS
CAATGGATCTTGAGATGCAT+TGG 0.494533 2.4:+17262398 None:intergenic
AGTGACTGCATGAACATTGA+TGG 0.495121 2.4:-17265640 MS.gene88377:CDS
TAACACTTGCCAACAAACTT+AGG 0.496054 2.4:-17263998 MS.gene88377:CDS
TGTCATTCTAGTAGGATATC+CGG 0.499087 2.4:+17262539 None:intergenic
ACCAGTGCTGCGACGCTGAT+GGG 0.500513 2.4:-17265237 MS.gene88377:CDS
GTCAAGAGGCCGGTTGCCGC+CGG 0.500607 2.4:-17269053 MS.gene88377:CDS
CAATCAAATTCCCCGCACAT+AGG 0.500729 2.4:-17263143 MS.gene88377:CDS
TCATCTTCCAATTCCGGTGA+AGG 0.503890 2.4:+17268809 None:intergenic
CTTGCTTCTGAGAATGCAAA+TGG 0.504051 2.4:-17259954 MS.gene88377:CDS
AACCAGTGCTGCGACGCTGA+TGG 0.504362 2.4:-17265238 MS.gene88377:CDS
GCAGTCAAGAGTTGTTCAAC+TGG 0.506129 2.4:-17266075 MS.gene88377:intron
TTTGTAGGTTGGTGCATTGG+AGG 0.510085 2.4:-17261439 MS.gene88377:intron
CAATACTTAGCTGCTCTTGG+TGG 0.510699 2.4:-17266998 MS.gene88377:CDS
AAAAGTCGGCGGAGATGGTG+GGG 0.511910 2.4:-17259546 MS.gene88377:CDS
AAATATCAGGATTAGCTGGC+AGG 0.512220 2.4:+17267697 None:intergenic
TGAAATGGGGCATAGAAGGA+AGG 0.512484 2.4:-17268981 MS.gene88377:CDS
GCTCGCTGCAATATTATGGT+TGG 0.513847 2.4:-17265416 MS.gene88377:CDS
TTTGTTGGCAAGTGTTAGAT+CGG 0.514871 2.4:+17264004 None:intergenic
TACCGCCGGCATTGCCAGCA+AGG 0.514935 2.4:-17269081 MS.gene88377:CDS
TTTAAAGGGGAATGGGGAAA+GGG 0.517747 2.4:-17263951 MS.gene88377:CDS
ATCCTCGCTTTAAAGGGGAA+TGG 0.518442 2.4:-17263959 MS.gene88377:CDS
GAGTGTTGGCACAAAGTTCA+AGG 0.519121 2.4:-17263099 MS.gene88377:intron
GAAGTTGGCAAACGCCGTAC+TGG 0.519212 2.4:-17264734 MS.gene88377:CDS
TCCCATTGATGTAGCATCCT+CGG 0.519421 2.4:+17259881 None:intergenic
GCTATCATACTACTACAATC+TGG 0.524303 2.4:-17260971 MS.gene88377:intron
AACAGGATGCATCGAAAGAT+CGG 0.525257 2.4:-17260500 MS.gene88377:intron
GCCGGTTGCCGCCGGCGAGG+AGG 0.525993 2.4:-17269045 MS.gene88377:CDS
TCTAGTAATTCGTGGGTGGT+TGG 0.528833 2.4:-17260873 MS.gene88377:intron
GGATTTGGAATCTCCTTATG+TGG 0.532162 2.4:-17268930 MS.gene88377:CDS
TGAATAGAATCAGAAGGCAT+TGG 0.535131 2.4:+17263233 None:intergenic
TGATTCTTCTGTTGCCTCTG+TGG 0.535675 2.4:-17268837 MS.gene88377:CDS
TTCGTGGGTGGTTGGTTCGG+AGG 0.536157 2.4:-17260865 MS.gene88377:CDS
TAAAACAATTTGAGAAAAGG+TGG 0.536563 2.4:-17260371 MS.gene88377:CDS
GAATCATAACAGAAAGGTGA+TGG 0.536680 2.4:+17259903 None:intergenic
AACTGCGGAAACTCAAACAC+AGG 0.538197 2.4:-17259650 MS.gene88377:CDS
CAAGGCCAACGTCAAGAGGC+CGG 0.540301 2.4:-17269063 MS.gene88377:CDS
GAGCTTCTTGCAATAGAAGA+TGG 0.542330 2.4:+17269163 None:intergenic
GTGTTTGGATCTCTTTGAGA+AGG 0.543275 2.4:-17264285 MS.gene88377:intron
CCCCATTCCCCTTTAAAGCG+AGG 0.543858 2.4:+17263957 None:intergenic
ACCTTTCTGTTATGATTCCG+AGG 0.548081 2.4:-17259898 MS.gene88377:CDS
CCAGCAAGGCCAACGTCAAG+AGG 0.550891 2.4:-17269067 MS.gene88377:CDS
CTGATGGGTTGCAGTTCTCA+AGG 0.551348 2.4:-17265222 MS.gene88377:CDS
GAGGCCGGTTGCCGCCGGCG+AGG 0.551770 2.4:-17269048 MS.gene88377:CDS
GGCCTTGCTGGCAATGCCGG+CGG 0.551903 2.4:+17269079 None:intergenic
TACGTTTACAGTGGTGAGAG+TGG 0.552751 2.4:-17267055 MS.gene88377:intron
TTCAAAGGTGTGCTGCAACC+GGG 0.555326 2.4:+17259840 None:intergenic
ACAGCAACCGAGACACTCAA+TGG 0.556567 2.4:+17262381 None:intergenic
TTTAGCAGAACTCCAAAGAC+GGG 0.557225 2.4:-17260457 MS.gene88377:CDS
ATTGAAGTGGTGAACGATGA+AGG 0.559225 2.4:-17265355 MS.gene88377:intron
CTCCAGCAGCTCAAATGTTG+TGG 0.559258 2.4:-17262591 MS.gene88377:CDS
ATGTTGTTGAAGCCTCTCAT+TGG 0.563891 2.4:+17264541 None:intergenic
AAAGTCGGCGGAGATGGTGG+GGG 0.564353 2.4:-17259545 MS.gene88377:CDS
TCAAACACAGGTTTGAAGGA+TGG 0.565403 2.4:-17259638 MS.gene88377:CDS
GGCAACCGGCCTCTTGACGT+TGG 0.565691 2.4:+17269058 None:intergenic
TAAATCTGTACATCTTTGAA+GGG 0.565715 2.4:+17267461 None:intergenic
AGATCTTCATCATATATGCC+AGG 0.567794 2.4:+17262618 None:intergenic
TGAAGATTGTGAAGAACTGA+GGG 0.570925 2.4:+17267630 None:intergenic
CAAAACATTGACATTGCGGC+AGG 0.571714 2.4:-17265145 MS.gene88377:intron
ACTGTATCTTCGAACAGGGC+AGG 0.572975 2.4:-17262307 MS.gene88377:intron
CTTTAGCAGAACTCCAAAGA+CGG 0.573217 2.4:-17260458 MS.gene88377:CDS
TGGAGTTCTGCTAAAGCCAA+AGG 0.573767 2.4:+17260465 None:intergenic
GAAGTCAAAGCAATGAGAGA+TGG 0.573901 2.4:-17259798 MS.gene88377:CDS
AGAAACTTCATGTTTGGTGT+AGG 0.574447 2.4:-17267922 MS.gene88377:CDS
CCTCCTGAAATGTATCAAGT+TGG 0.574724 2.4:-17262339 MS.gene88377:CDS
TCTCGAACTCCTCGAACACC+CGG 0.575626 2.4:-17259858 MS.gene88377:CDS
GGAGGTTGTTAGGATTTCAA+GGG 0.577187 2.4:-17262562 MS.gene88377:CDS
GGCAAAGACCTCCTCGCCGG+CGG 0.578360 2.4:+17269037 None:intergenic
AATTGATGCAAGAGACGCGT+TGG 0.579791 2.4:-17264816 MS.gene88377:CDS
TCTTCCAATTCCGGTGAAGG+TGG 0.580653 2.4:+17268812 None:intergenic
TAGGCAACCAAGAGGAAAGT+GGG 0.582241 2.4:-17267903 MS.gene88377:CDS
AAGAGATGCTTGATTCGCTA+CGG 0.583525 2.4:-17269135 MS.gene88377:CDS
TCAAGATCCATTGAGTGTCT+CGG 0.583596 2.4:-17262388 MS.gene88377:CDS
GAAATGGGGCATAGAAGGAA+GGG 0.583632 2.4:-17268980 MS.gene88377:CDS
ACTCCAAAGACGGGTTGTCA+AGG 0.584545 2.4:-17260448 MS.gene88377:CDS
AATCATAACAGAAAGGTGAT+GGG 0.585932 2.4:+17259904 None:intergenic
TGTTTGTCATTATGCAGGAG+AGG 0.586227 2.4:-17263922 MS.gene88377:intron
CATTTGCATTCTCAGAAGCA+AGG 0.586571 2.4:+17259955 None:intergenic
GATTCACAAAAGCAGAGTGT+TGG 0.586723 2.4:-17263113 MS.gene88377:CDS
TTTATCTAGTAATTCGTGGG+TGG 0.587849 2.4:-17260877 MS.gene88377:intron
GTGCAACGAGGATCAAGAGC+GGG 0.588885 2.4:-17265449 MS.gene88377:CDS
TTCGAAGATGTCAGACGACA+AGG 0.590953 2.4:-17260777 MS.gene88377:intron
TCATATAATCCAAGCTGGCA+AGG 0.592658 2.4:-17265178 MS.gene88377:CDS
CGAGACAAGGATGAAAACAA+TGG 0.593654 2.4:-17260340 MS.gene88377:CDS
TCCTCGGAATCATAACAGAA+AGG 0.595831 2.4:+17259897 None:intergenic
TCTGTATGCAGAGTAAAGCT+GGG 0.596542 2.4:-17267505 MS.gene88377:intron
ATTATAAGCTGCATCTACCA+TGG 0.597260 2.4:+17267379 None:intergenic
CTGAAGATTGTGAAGAACTG+AGG 0.597633 2.4:+17267629 None:intergenic
TGAAATTCATTTCAGCACAA+CGG 0.598167 2.4:-17266382 MS.gene88377:CDS
TCTACTCATATAATCCAAGC+TGG 0.598237 2.4:-17265183 MS.gene88377:CDS
ATCAAATTCCCCGCACATAG+GGG 0.598596 2.4:-17263141 MS.gene88377:CDS
TGAAAACAATGGAGGAAATG+TGG 0.599789 2.4:-17260329 MS.gene88377:CDS
GTAGGCAACCAAGAGGAAAG+TGG 0.601405 2.4:-17267904 MS.gene88377:CDS
GTTGTTAGGATTTCAAGGGC+CGG 0.602452 2.4:-17262558 MS.gene88377:CDS
CCTCGCTTTAAAGGGGAATG+GGG 0.602847 2.4:-17263957 MS.gene88377:CDS
ACTCAAACCCGTAAATGTCA+AGG 0.606819 2.4:+17264696 None:intergenic
GAAAATACACCTTTAAGATG+AGG 0.607198 2.4:+17265999 None:intergenic
AAGAGGAAAATGCCGAGTTG+AGG 0.611284 2.4:-17260401 MS.gene88377:CDS
TTCGTGGAGAAATTGCAAGA+AGG 0.611565 2.4:-17261057 MS.gene88377:CDS
CATCTAGTTGTGAACTGCTG+CGG 0.612886 2.4:-17263199 MS.gene88377:CDS
TTAGGCAAAGACCTCCTCGC+CGG 0.614307 2.4:+17269034 None:intergenic
GTTGCTGCAGGTTATGAAAG+TGG 0.618316 2.4:-17267733 MS.gene88377:intron
AGCTAATCCTCGCTTTAAAG+GGG 0.620142 2.4:-17263964 MS.gene88377:CDS
CCAAACTGTATCTTCGAACA+GGG 0.620451 2.4:-17262311 MS.gene88377:CDS
CCAACTTGATACATTTCAGG+AGG 0.620775 2.4:+17262339 None:intergenic
AGACTGCTAGAATACTTCAA+AGG 0.620825 2.4:+17259825 None:intergenic
TACTTATGGATCTACCAGTA+CGG 0.622051 2.4:+17264720 None:intergenic
AGTAGTTGAATAGAATCAGA+AGG 0.623560 2.4:+17263227 None:intergenic
GATGCAACATCATGTCTTGA+AGG 0.625934 2.4:+17259927 None:intergenic
GCTTATAATGAAATGATAGG+AGG 0.628927 2.4:-17267365 MS.gene88377:intron
CACATTCCATTGAAGAACTG+CGG 0.634185 2.4:-17259665 MS.gene88377:CDS
GTATGGGTTTCTGCTCGCTG+AGG 0.636571 2.4:-17262421 MS.gene88377:CDS
GAATCCAGAGCCCCTATGTG+CGG 0.637096 2.4:+17263131 None:intergenic
AGATGCAAGAGCTTTGGTCG+AGG 0.640300 2.4:-17259715 MS.gene88377:CDS
TAATGAAAATCACATTGAAG+TGG 0.640317 2.4:-17265368 MS.gene88377:CDS
ACAGTGGTGAGAGTGGAGCT+GGG 0.640986 2.4:-17267048 MS.gene88377:intron
CAACTTGATACATTTCAGGA+GGG 0.641607 2.4:+17262340 None:intergenic
GTGAAAATGGAAATGAAATG+GGG 0.642989 2.4:-17268994 MS.gene88377:CDS
ATCCAGAGCCCCTATGTGCG+GGG 0.643120 2.4:+17263133 None:intergenic
TTCAACTGGCTAATGGCGAG+AGG 0.651569 2.4:-17266061 MS.gene88377:CDS
TCTACTCTCTCTATTGGACG+AGG 0.654007 2.4:-17264048 MS.gene88377:CDS
GAAGCCTAAAGACCTACCGC+CGG 0.659149 2.4:-17269095 MS.gene88377:CDS
ATCATAACAGAAAGGTGATG+GGG 0.659923 2.4:+17259905 None:intergenic
GCATAAACTATGCCAATGAG+AGG 0.661227 2.4:-17264553 MS.gene88377:CDS
GGTGGATTGAATACGAGACA+AGG 0.663322 2.4:-17260353 MS.gene88377:CDS
AGATGCTTGATTCGCTACGG+CGG 0.665363 2.4:-17269132 MS.gene88377:CDS
TTTATACAGCGAATAAAGTG+AGG 0.669836 2.4:+17262660 None:intergenic
TCACCAAAACATTGACATTG+CGG 0.674975 2.4:-17265149 MS.gene88377:CDS
CTTGCAATAGAAGATGGTGA+AGG 0.680682 2.4:+17269169 None:intergenic
GACAAGGATGAAAACAATGG+AGG 0.682517 2.4:-17260337 MS.gene88377:CDS
CGGTGAAGGTGGAGCCACAG+AGG 0.683675 2.4:+17268823 None:intergenic
ACAGCGAATAAAGTGAGGCG+TGG 0.685289 2.4:+17262665 None:intergenic
GTTTGGTGTAGGCAACCAAG+AGG 0.697026 2.4:-17267911 MS.gene88377:CDS
AGGCAACCAAGAGGAAAGTG+GGG 0.708295 2.4:-17267902 MS.gene88377:CDS
AAAGCAATGAGAGATGGCAA+CGG 0.715162 2.4:-17259792 MS.gene88377:CDS
TGTGCAACGAGGATCAAGAG+CGG 0.729882 2.4:-17265450 MS.gene88377:CDS
CGTCGTTCAAATGTGCAACG+AGG 0.739942 2.4:-17265461 MS.gene88377:CDS
TGGTCGAGGTAAGAACAACA+GGG 0.743078 2.4:-17259701 MS.gene88377:CDS
GGAATTGTAGAAACAGCACA+AGG 0.753864 2.4:+17268866 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr2.4 gene 17259521 17269203 17259521 ID=MS.gene88377
chr2.4 mRNA 17259521 17269203 17259521 ID=MS.gene88377.t1;Parent=MS.gene88377
chr2.4 exon 17268784 17269203 17268784 ID=MS.gene88377.t1.exon1;Parent=MS.gene88377.t1
chr2.4 CDS 17268784 17269203 17268784 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17267841 17267942 17267841 ID=MS.gene88377.t1.exon2;Parent=MS.gene88377.t1
chr2.4 CDS 17267841 17267942 17267841 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17267602 17267745 17267602 ID=MS.gene88377.t1.exon3;Parent=MS.gene88377.t1
chr2.4 CDS 17267602 17267745 17267602 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17267366 17267516 17267366 ID=MS.gene88377.t1.exon4;Parent=MS.gene88377.t1
chr2.4 CDS 17267366 17267516 17267366 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17267230 17267257 17267230 ID=MS.gene88377.t1.exon5;Parent=MS.gene88377.t1
chr2.4 CDS 17267230 17267257 17267230 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17266898 17267066 17266898 ID=MS.gene88377.t1.exon6;Parent=MS.gene88377.t1
chr2.4 CDS 17266898 17267066 17266898 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17266352 17266415 17266352 ID=MS.gene88377.t1.exon7;Parent=MS.gene88377.t1
chr2.4 CDS 17266352 17266415 17266352 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17266183 17266196 17266183 ID=MS.gene88377.t1.exon8;Parent=MS.gene88377.t1
chr2.4 CDS 17266183 17266196 17266183 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17266009 17266093 17266009 ID=MS.gene88377.t1.exon9;Parent=MS.gene88377.t1
chr2.4 CDS 17266009 17266093 17266009 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17265606 17265709 17265606 ID=MS.gene88377.t1.exon10;Parent=MS.gene88377.t1
chr2.4 CDS 17265606 17265709 17265606 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17265356 17265494 17265356 ID=MS.gene88377.t1.exon11;Parent=MS.gene88377.t1
chr2.4 CDS 17265356 17265494 17265356 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17265146 17265264 17265146 ID=MS.gene88377.t1.exon12;Parent=MS.gene88377.t1
chr2.4 CDS 17265146 17265264 17265146 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17264688 17264840 17264688 ID=MS.gene88377.t1.exon13;Parent=MS.gene88377.t1
chr2.4 CDS 17264688 17264840 17264688 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17264508 17264597 17264508 ID=MS.gene88377.t1.exon14;Parent=MS.gene88377.t1
chr2.4 CDS 17264508 17264597 17264508 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17264286 17264363 17264286 ID=MS.gene88377.t1.exon15;Parent=MS.gene88377.t1
chr2.4 CDS 17264286 17264363 17264286 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17263923 17264081 17263923 ID=MS.gene88377.t1.exon16;Parent=MS.gene88377.t1
chr2.4 CDS 17263923 17264081 17263923 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17263100 17263297 17263100 ID=MS.gene88377.t1.exon17;Parent=MS.gene88377.t1
chr2.4 CDS 17263100 17263297 17263100 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17262519 17262724 17262519 ID=MS.gene88377.t1.exon18;Parent=MS.gene88377.t1
chr2.4 CDS 17262519 17262724 17262519 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17262308 17262443 17262308 ID=MS.gene88377.t1.exon19;Parent=MS.gene88377.t1
chr2.4 CDS 17262308 17262443 17262308 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17261325 17261454 17261325 ID=MS.gene88377.t1.exon20;Parent=MS.gene88377.t1
chr2.4 CDS 17261325 17261454 17261325 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17260972 17261082 17260972 ID=MS.gene88377.t1.exon21;Parent=MS.gene88377.t1
chr2.4 CDS 17260972 17261082 17260972 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17260778 17260890 17260778 ID=MS.gene88377.t1.exon22;Parent=MS.gene88377.t1
chr2.4 CDS 17260778 17260890 17260778 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17260305 17260517 17260305 ID=MS.gene88377.t1.exon23;Parent=MS.gene88377.t1
chr2.4 CDS 17260305 17260517 17260305 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
chr2.4 exon 17259521 17260003 17259521 ID=MS.gene88377.t1.exon24;Parent=MS.gene88377.t1
chr2.4 CDS 17259521 17260003 17259521 ID=cds.MS.gene88377.t1;Parent=MS.gene88377.t1
Gene Sequence

>MS.gene88377

ATGATGTTATCACCTTCACCATCTTCTATTGCAAGAAGCTCTTTAGAAGAGATGCTTGATTCGCTACGGCGGCGAGACGAAGAAGAGAAGCCTAAAGACCTACCGCCGGCATTGCCAGCAAGGCCAACGTCAAGAGGCCGGTTGCCGCCGGCGAGGAGGTCTTTGCCTAAAAGTTTTAAGGTTGATGGTGAAAATGGAAATGAAATGGGGCATAGAAGGAAGGGAAGTTTTGGAAATAAGAAGTTGATGTTGGATTTGGAATCTCCTTATGTGGTTATTTCAGAAGAGAATAGTGTTATTAGTGAACAATCTTCACCTTGTGCTGTTTCTACAATTCCTGTTGATGATTCTTCTGTTGCCTCTGTGGCTCCACCTTCACCGGAATTGGAAGATGACAATGTTTCTTATTTCATCAAAAAGGTAACTAAGGACTTTAAATTTTTGTGGTTTTGCAATTTGCAATGGTAACTAGATTTTGGTTGAAGTTTTAACAGTGGTTTTAGTGTTAATCTGTTTCTTTTTTTGTATTTTATATTCTAGTTCTTGAATATGATGAGGTTTTGGTGTTTGATTGGATGAAAAGCAATTGCTTGAGTGAAATATGGAAGGTGGTGTTAGAAAAAAGCAATTAGCATGGCCCTTTCAGAATTACAAATAAAACCACACTCTACACATGCCAGTTAGATTATGGGTTTTGTTAAACAATGCCTTAAGTTAAGGAGAGTCGATATTTAAAAGTTTTTATTGAAAATCATAGCAGCATTCCATGGATTATTATTTACTAAAAAGTCACACTTTCTAATTGATTTTTTTTTAATATTTTTAATTCCTAGACAAGTGCTTTTCGAGCACTGCTTCACATTTGCCCTAGATGATTAAAATTGATGCAAGACTGTTTCTAATTTAAATTTAAAGATATCATTATATATTGGTATTTATCGGCTCATACATTGGTTCGGAGCCTTTATTTGGTTGATATTTCATACCGGCACCAGTTCTTTGGTAGGCTAATTTTCTTTCTGTTTCTGTTGCTTCCCCAAAACCTTCCTATTGCTTGATTTTTATATAATTGAACTACATCAAAGTTACTTTTAACGGATTACCTAAGATGGTTTTTTGTGCTTGTTATCTATTTAGTAATTAGTAATGTGTAAGAGTGTTTTTTGTTTTGCCTATTAACTATTGGTGTAGATTCAAGTTGAGAGGTTGACTGCATGTGTTTTTCTGTTAAATTTCCTTTCTGTTTTTGGTTTTTCCACAGAAACTTCATGTTTGGTGTAGGCAACCAAGAGGAAAGTGGGGACTGGGAAGAATACAGTCAACTTCTGGAGAACAAGCATCAGTTTCACTCTCAAATGGAAATGTAAACTTCTAAACATTTTGTGTCTTTATAAGATAGTATTCATTGTTGACTATGCGAGATAACATGCTATTTGTGTGGATGAGTTGTTGCTGCAGGTTATGAAAGTGGCACGAACAGATCTCCTGCCAGCTAATCCTGATATTTTAGAGGGTGTGGATGATCTTATACAGCTCAGCTATTTGAACGAGCCCTCAGTTCTTCACAATCTTCAGTTTAGATATTCTCAAGATATGATTTATGTATGTCTGCTGCTATGGTTTGTTGTTTTACTCAGATGATTATCTATGTATTCTCATATGCTGCTTGTGTGTTTTCTGTATGCAGAGTAAAGCTGGGCCAATTTTAATTGCTCTCAATCCCTTCAAAGATGTACAGATTTACGGAAACGATTATGTCTCTGCTTACAGGAAGAAATCTCTTGATAGTCCTCACGTTTTTGCCATGGTAGATGCAGCTTATAATGAAATGATAGGAGGTAAATAAAATTCTCCTTTCTTTCTCCTCCTTTGAAATCGTTATTATGTAGTTGTACGATATATGATATATTTACATAGGTTTTCTGTTTACGTGTTGTTCATTGCAGAGGAAGTAAATCAATCCATTATCATAAGGTCAGAACTTGGTACATTTAAGGCTCTTTTTGTTTATGTTCCAAAAATAGATAGCATCAAATTGTTATTTTTTTTTTTTTTTATAATAATCAAATTGTTATTATAATAAGATATAGCCTGCTTGTATATTTGTTAATAATCACAGTTACAATTACGTTTACAGTGGTGAGAGTGGAGCTGGGAAAACAGAAACAGCGAAAATTGCGATGCAATACTTAGCTGCTCTTGGTGGTGGCAGTTGTGGGATAGAAAATGAAGTTCTTCAGACAAATGTTATACTAGAAGCTTTTGGCAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGTGAGTTTTTTGTTCTTTTCATTTTGGTGAAACTTACTCCTGTTGTTGCTTTATTGTAGCTCTGCTTGACATGTTTTCTATCAAAAATGTCCATAAAAAGACAAATCTACAATTTAAGCCTTTCTTTTAATTTTCTGAAAGCCGTGTCAAGTAGTGTTGTTGTTGTTTGATCCGTGTAGCCGACCCCACCTAGTGGGATATGGCTTGGTTGTTGTTTCTGTGTAGAACAGTGTTCAAACTGCAGCTATAGCGACACTATAATGTTGTAGTGTAGTGGAATTAGTCGCTATTGTTATGCGATATCCTATTTAGTACAAATTGTTGTCAAATAGCGACTATTGTGGCGTTATAGTCCTGTAGCGTAACAGAATTTTAACAAACTATTTTATGCGATCCACAATTGACAACACTGGTTTAGAATGTTGTGGATGGTATCTAATGGCTGATCACTTCAACTGATTTCCATTTTTAATTTGGTGTAGGGGAAGTTGATTGAAATTCATTTCAGCACAACGGGAAAAATGTGCGGGGCTAAAATTCAAACCTGTAAGCATGTTCAAGTGAAATATGTTTCATAAAGTTTTGTTCTTTTAAGATAGACGATTTTTTTTTTTTTTTTTTTATTAAAAATCTACTGATTCAACTTGATCTGACGGCTTCGTGTTTCTCATATGCCGATTCCCATATGTCATCATAAACAGTTCTATTGGAAAAGGTAACTTGTGTTTCTTATTTGAACTTAAGTATGGAACTGAAATATTTAACTTTCTCGATTTCTTATATCACCGTGTCTTCTGTCGGCAGTCAAGAGTTGTTCAACTGGCTAATGGCGAGAGGTCTTATCACATATTTTATCAACTTTGTGCTGGATCTTCACCTCATCTTAAAGGTGTATTTTCTATACAACCTATCAATTAGTTGGGATACATGTATACTTCTGTATCATCTTTGATATCTCAATGACCATCTTTGAGATAATCTTTTTAAATATGACTTTGAATTGGATCCTCCTCTGCTGTTTAATTTTATTTACAAATTTTAAACAGACACCTTTTACATGGAAATTCATTGACACCGATTCCCGTAAACAAATGCATAATTTACATTTGCCTTTTGATTTCTACATCAGCTTAATTGAGCTAGCTTGTACATATTATTACTCACGAAATCATACTCTTTTCTGTGCAGAGAGGCTAAATCTTAGAGCAGCCAGCGAATATAAATATCTAAATCAGAGTGACTGCATGAACATTGATGGCGTTAATGATGCTAAAAAGTTTCATAGGCTAAAGGTATATTGTTTGACAGTTCATTTACTGAACAATAACTTCCCAGTATATTTACGGCCTCCTGAGATCTCATGTTATTTATTTTCCCCTTTTGGCATCTGTATTTTCCCCCAGAAAGCATTGGACGTCGTTCAAATGTGCAACGAGGATCAAGAGCGGGTCTTTAAGATGCTCGCTGCAATATTATGGTTGGGAAATATATCATTCCATGTTAATGATAATGAAAATCACATTGAAGTGGTGAACGATGAAGGTAGGATTCATAGTTTATGCATAATGTTTTTAAATGGGCTATTCGCACCTTATCATGTTTATAAATGTTTATTTATATTTTGTTTTGGCAGCTGTAACCAGTGCTGCGACGCTGATGGGTTGCAGTTCTCAAGGACTAATGACAGTATTATCTACTCATATAATCCAAGCTGGCAAGGATACTATCACCAAAACATTGACATTGCGGCAGGTCCGTTTATTACTTGAACAATTCAGTCAGGGCCAGTTTGTTACGGTTATTACATTTTTTGTATACTTTTAGGAGTTTTTTCAAAATCAATAATCACTTTTAGGAGTTTTTATCTACTTGTTACAACTTATAAAAAATGAAAATCTGGAAGAAAAAAATAATAATCTAAAAACTGCTTAAAATGAAAAGCAGTTTTGAGTAACTTGGTTTAAAAATCAATTTTGTAACAAGCAGGGCCCGTAACTTATTATTTTATAGCTCATTGTCGAATTATATTAAGTCTAATCTTTATATTCCATATTCAGGCAATTGATGCAAGAGACGCGTTGGCAAAATTTATCTATGCCAGTTTGTTTGACTGGCTTGTAGAACAAGTTAATAAATCACTTGAAGTTGGCAAACGCCGTACTGGTAGATCCATAAGTATCCTTGACATTTACGGGTTTGAGTCATTCCAGGTTTGCTATTTATTTATATTCTTATTATTGTTCCTTCTTATACTATCGGTATGTTTTCTGATATTTTTTCTTTTTGTTTTTCTTTTGTAGAAAAACAGCTTTGAACAGTTGTGCATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAATCGACATCTTTTTAAACTGGAGCAACAGGTTAGTGACTGTTTTAAGCTTCAATTTTATATGAAAAATTATGAATGTGTGACACAACGTGAACATTCATATGGCATGCTATGTATTCTTGAATAGACATGATATGCATTACAGCATTATCACAACTTATATATCTTGTCTCAGGACTATGAAATTGATGGCGTTGATATGACCAAAGTAGATTTCGAGGACAATCAAGAGTGTTTGGATCTCTTTGAGAAGGTATTTATATGGTTTAAGCTTTTCTATATCTTTTGTCTGAGCCAGTTAATAGGCCGTTGAGTGTTGGCTTTTGTTGCATCCATTTAAGGACAATACACATTTTTGCATATCAAAATATTTTGTTCCGGTCTCAATATTGGAGCTCACATTAACATTATTCTGTGACTTAGTATACTAATTATGTATTGTTTTGTAAATGTGCAGAAGCCTATAGGTCTACTCTCTCTATTGGACGAGGAATCAAATTTTCCAAGGGCAACCGATCTAACACTTGCCAACAAACTTAGGCAGCACCTGCAAGCTAATCCTCGCTTTAAAGGGGAATGGGGAAAGGGTTTCAGTGTTTGTCATTATGCAGGAGAGGTTAGTAGCTTCTCTGCATTTAAGACACTTCCTCGTTTGGTTGCTTTAAAATTTATTTGTTGCATTTTTTTTAATAGTCAAATTGATCCTTCCAATCCATTCTGTTATAAATATACTTCCTCTCTTTCTTTTTAACTCAGTTTTTTAGAAGAATTTTGTTCCTATTTATTTGTCATTTTCAAAGTTCAATGCAACATTAACAATTTTTTTGTGAATGATTCCTTTTAACTATTTATTGTAGAGAGACAAATAGGTGCAATACGATAATATATATACCTTTTAAATATAATAACATCTCTCTCTCGAGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGCCTTTTACCAATAAACTTTGCTTATTTAAGTTTCTTTTTCCTTTTCTTGCAATTCAATACTAAAATTAAATGCCGGGTGTTTTCTAGAAAAAATTATTAACTTACAATTTTTTTTTGAGTAGCATTGATAATTTTCTGGTTTCAAATTTAAATGTGGAATGCGTACCATGGAAGTTAACTTTGTGTACTTATGTTTCTGATCATTCTAATCCGGTCCTCAATCAGGTTGTGTATGATACAAATGGCTTTCTAGAGAAGAACAGAGATCCAATGCCTTCTGATTCTATTCAACTACTATCATCATCTAGTTGTGAACTGCTGCGGTCGTTCTCCAAGACGCTTAACCAGTCTCAGAAGCAATCAAATTCCCCGCACATAGGGGCTCTGGATTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGTATTCTTGTACCATTACTTGACCTGGTTCTAAATCTTTAATATTTTCAAAGAAATGATTTTGACATTATTGATTTATGGAGATGAACTTAGATAGATAAATGACACTGAGAAATAAGCAAAATGGCATACTTTGGGATTTGGATTCCACGCATTGGATGCACGACGCATTAATTAATTTTGGTCGTCAGATCTCAAATCAATAGTGTAGATTATTTGAAAAATGATTTAGTGAAGGTGTAATGTGAGCCAACTGACCTCAAATCAATGGTCGAGATAGATTAATGCATCTAAATGCGTGGATTTATAAATGCCGGGAATCTGAATCCCCAGTATTTGAGGTGAATTTTAGGACTGACGTCTCTCTTTCTTTTAGGGTCAATTATTCAAGTTAATGCATCAGTTGGAGAGCACCACGCCTCACTTTATTCGCTGTATAAAGCCGAATGCTAAGCAACTTCCTGGCATATATGATGAAGATCTTGTTCTCCAGCAGCTCAAATGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCAAGGGCCGGATATCCTACTAGAATGACACATCAAGATTTTGCCAGAAGGTAGTGGAGAAAATGACTATATTTTTGGATTATCTTGAGTATTGTGCTAATATATACATTTCTACATATATTTAGGTATGGGTTTCTGCTCGCTGAGGCCAATGCATCTCAAGATCCATTGAGTGTCTCGGTTGCTGTTTTGCAACAATTTAATATCCCTCCTGAAATGTATCAAGTTGGCTTCACCAAACTGTATCTTCGAACAGGGCAGGTATGTGTGAGCAGCTTCATGTTTTAACAGTGTATAGCGCCAAGAGCTGTAGTATTGGCGAATAAATCATGGTTAGGTTGGCAATTAGATTCATTAAGCAATAAAACATCCATATCTAAGTCCACCTTAACCTATAACTTAACATCCAATCATATCAATAGATTTAATGAAGTATAAGTGATTGTATGGTTAGTTTAGTAATTGTTGAGAGTTCCACATTAGATGGATATGATCTGAAAAAATGTTTATAAGCGGGGTGCATCATTCGCCTTACGAGCTGGATTTGTAGGGATGAGTTAGTCCCAATCCAAATTCTAAGAGTTATAATCAACCTAAAATATTTGTTGGATGCCCAAATGTTTATAGAGTGACATACATTTGGACTTGTAGGAATCTAGTTGCATTTAAAAAAAAAACGATGGTGGAGAATGAAATCTTGCACAAATGACAGTTTAATTAGTTTATGATAGAGAGAAAGAGGAGAGTTTTACTTTTTTTAATATATAAATATGATTTTAAATTTGGTTTTAATGGGTTTTAGAAATTTTCTGTGGATCCTAAATGTATTGATGGATTTATGTTTATCCATTCCTTACAATACAATCCCCTTTTATTTTTTCATTTAACACTTCAGTCACAGTTGATTCCACCTAACAGTTACTGTTTAGAAAGTTATCCACTATTTTCTTCCCCAAATGAGTATTTTGGTTCTGAACTATGAATTTGTTTGCTTGTTTTAGTTATATATTATTTATAAATATTGACTTTAGTCTTGTTTTAGCCGATTTTTTTTATCAATTCATAGAGCGGTTTATCTGACGTGATTATTCTTGTGCTTTGATTGATTTTGTAGGTTGGTGCATTGGAGGATAAGAGAAAATTGGTTTTGCAGGGAGTACTCGGGGTTCAAAAATGGGTTCGGGGTCATCAAGCTCGCAGTCATTACGATAAACTTAAGATTGGAGTGACAACTTTACAATCATGTAATGCCTGGATATCAATATTACTTTATTTGTATCAAAAGCTCAGCTGGTTCTTCATTTTATGAATTTTTTTTCTTTTTTGTGAATATTTTTTCAAGATACTTTACAAAAAAATCATAGCTAATATTAAACCAAAAAGAAAACTCAGTGCTTTTTGCTTAACCTCGGTGGACTTGAGTATTCATAACCTCGGTTATAGTTTGTATGCAAATATCTTAATTGCTACTTTGATTATATTGTAGTTGTTCGTGGAGAAATTGCAAGAAGGAAATATGGTGTTATGGTGAAGTCGTCTATAACTATTTCTTCTGAAAATATTGAGGAGATAGAGGCTATCATACTACTACAATCTGGTTAGTGTGTTTTTTGTAAAGTATACCCTTGGTACATGCATGATATATGATTTTCTTAATATTCGTTACCTTTTTATCTAGTAATTCGTGGGTGGTTGGTTCGGAGGCATAATAGTAGCTTATGTAAGTTTAAGATACATCCTGAGAATGGAAAAACGAGGCGAAGGTCACGTTCGAAGATGTCAGACGACAAGGTACTTTACTATGCATTTTTTTTAATTTGGAAAAATATGCAATAGATTCTAATCTGATTTCCTCAAAGTTTTAATTTAGATGCCATTGATTTGGGTTTTTTTAAGTTGTTTTATACATTTAAATAGTATTCTCCTCCTTTTTACGTCCATCCAACTAAAAAATGTCAATTTTTAGTAGAACTCCAAACCTTGTTGAAGTTCCTAGCCTTTCAATGTGTTAAATGTCTTATTATTTTTTATTTTTTTATTTTTTTAAACAGGATGCATCGAAAGATCGGAGTCAAAATCTGCCTTTGGCTTTAGCAGAACTCCAAAGACGGGTTGTCAAGGCCGAATCAACTATAGAGCAAAAAGAAGAGGAAAATGCCGAGTTGAGGGAACAACTAAAACAATTTGAGAAAAGGTGGATTGAATACGAGACAAGGATGAAAACAATGGAGGAAATGTGGCAACGACAAATGTCATCTTTGCAAGTATGTTTTCATATCATCAATTTTTTACATGCTCATTAATGTTATTGTAATGGATGGTGTTGATTCATCTCATCAAACCTAGCTTTTGTTTAGCTCATTCTGTTGTAGCCTTTTTGAACATATGCATGGTATCTCTCCAACCCTCCATCCATAATTAAGAGAAGTGCAACCAGTAATACATTCTTTAATACACTACTGCAATTGAGACCTAAAAATTGCAAACTTATTTACTATAATAGTCATATTTGTAAACTGTATAAGCGTTTGAAACCTACAAATTCTGATTGCAATTTCAATGCAGATGAGTCTTGCTGCTGCTAGAAGCAGCCTTGCTTCTGAGAATGCAAATGGTCAACCTTCAAGACATGATGTTGCATCCCCATCACCTTTCTGTTATGATTCCGAGGATGCTACATCAATGGGATCTCGAACTCCTCGAACACCCGGTTGCAGCACACCTTTGAAGTATTCTAGCAGTCTTTCAGAAGTCAAAGCAATGAGAGATGGCAACGGTAGTTTGGGCAATCTGATGAAAGAGTTTGAGCAGCGCAGTCAGACATTCGATGAAGATGCAAGAGCTTTGGTCGAGGTAAGAACAACAGGGCAGTCTGCGAATCCACATTCCATTGAAGAACTGCGGAAACTCAAACACAGGTTTGAAGGATGGAAGAAAGAATACAAGATGCGATTAAAGGAAACGAAAGCAAGACTAAAATTACGGAATTCGGAAATGGAAAAAAGTCGGCGGAGATGGTGGGGGAAATTGAGTTCTAGAGCACAATAA
Protein sequence

>MS.gene88377.t1

MMLSPSPSSIARSSLEEMLDSLRRRDEEEKPKDLPPALPARPTSRGRLPPARRSLPKSFKVDGENGNEMGHRRKGSFGNKKLMLDLESPYVVISEENSVISEQSSPCAVSTIPVDDSSVASVAPPSPELEDDNVSYFIKKKLHVWCRQPRGKWGLGRIQSTSGEQASVSLSNGNVMKVARTDLLPANPDILEGVDDLIQLSYLNEPSVLHNLQFRYSQDMIYSKAGPILIALNPFKDVQIYGNDYVSAYRKKSLDSPHVFAMVDAAYNEMIGEEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSCGIENEVLQTNVILEAFGNAKTSRNDNSSRFGKLIEIHFSTTGKMCGAKIQTFLLEKSRVVQLANGERSYHIFYQLCAGSSPHLKERLNLRAASEYKYLNQSDCMNIDGVNDAKKFHRLKKALDVVQMCNEDQERVFKMLAAILWLGNISFHVNDNENHIEVVNDEAVTSAATLMGCSSQGLMTVLSTHIIQAGKDTITKTLTLRQAIDARDALAKFIYASLFDWLVEQVNKSLEVGKRRTGRSISILDIYGFESFQKNSFEQLCINYANERLQQHFNRHLFKLEQQDYEIDGVDMTKVDFEDNQECLDLFEKKPIGLLSLLDEESNFPRATDLTLANKLRQHLQANPRFKGEWGKGFSVCHYAGEVVYDTNGFLEKNRDPMPSDSIQLLSSSSCELLRSFSKTLNQSQKQSNSPHIGALDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNAKQLPGIYDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQDFARRYGFLLAEANASQDPLSVSVAVLQQFNIPPEMYQVGFTKLYLRTGQVGALEDKRKLVLQGVLGVQKWVRGHQARSHYDKLKIGVTTLQSFVRGEIARRKYGVMVKSSITISSENIEEIEAIILLQSVIRGWLVRRHNSSLCKFKIHPENGKTRRRSRSKMSDDKDASKDRSQNLPLALAELQRRVVKAESTIEQKEEENAELREQLKQFEKRWIEYETRMKTMEEMWQRQMSSLQMSLAAARSSLASENANGQPSRHDVASPSPFCYDSEDATSMGSRTPRTPGCSTPLKYSSSLSEVKAMRDGNGSLGNLMKEFEQRSQTFDEDARALVEVRTTGQSANPHSIEELRKLKHRFEGWKKEYKMRLKETKARLKLRNSEMEKSRRRWWGKLSSRAQ