Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88895.t1 | XP_013469608.1 | 81.9 | 270 | 6 | 1 | 1 | 270 | 1 | 227 | 3.60E-118 | 434.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88895.t1 | A0A072VPP7 | 81.9 | 270 | 6 | 1 | 1 | 270 | 1 | 227 | 2.6e-118 | 434.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049321 | MS.gene88895 | 0.825549 | 4.41E-54 | -1.69E-46 |
| MS.gene049419 | MS.gene88895 | 0.807041 | 6.13E-50 | -1.69E-46 |
| MS.gene051848 | MS.gene88895 | 0.834682 | 2.60E-56 | -1.69E-46 |
| MS.gene054479 | MS.gene88895 | -0.802972 | 4.35E-49 | -1.69E-46 |
| MS.gene058223 | MS.gene88895 | 0.823734 | 1.18E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88895.t1 | MTR_1g098260 | 81.852 | 270 | 6 | 1 | 1 | 270 | 1 | 227 | 4.86e-157 | 436 |
| MS.gene88895.t1 | MTR_1g098260 | 97.059 | 204 | 6 | 0 | 1 | 204 | 1 | 204 | 6.87e-147 | 409 |
| MS.gene88895.t1 | MTR_1g098260 | 96.739 | 184 | 6 | 0 | 1 | 184 | 1 | 184 | 6.72e-130 | 366 |
| MS.gene88895.t1 | MTR_1g098260 | 96.216 | 185 | 7 | 0 | 1 | 185 | 1 | 185 | 1.11e-128 | 363 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88895.t1 | AT1G22790 | 53.623 | 207 | 78 | 6 | 1 | 190 | 1 | 206 | 1.40e-59 | 188 |
| MS.gene88895.t1 | AT1G22790 | 53.623 | 207 | 78 | 6 | 1 | 190 | 1 | 206 | 1.40e-59 | 188 |
| MS.gene88895.t1 | AT1G34010 | 43.548 | 186 | 79 | 6 | 1 | 185 | 1 | 161 | 5.85e-40 | 137 |
| MS.gene88895.t1 | AT1G34010 | 43.548 | 186 | 79 | 6 | 1 | 185 | 1 | 161 | 5.85e-40 | 137 |
| MS.gene88895.t1 | AT1G34010 | 43.548 | 186 | 79 | 6 | 1 | 185 | 66 | 226 | 2.55e-39 | 137 |
Find 84 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGGCTTACTTGTTATTC+TGG | 0.167627 | 1.1:+70660300 | MS.gene88895:CDS |
| TATGCCTCTCCTCAAGCTTT+TGG | 0.191293 | 1.1:+70658699 | MS.gene88895:CDS |
| TTCTTCTCTGCTTCGGCTTC+AGG | 0.195978 | 1.1:+70657532 | MS.gene88895:CDS |
| GGGCCTGAGCCTACTCCTTT+TGG | 0.208630 | 1.1:+70657564 | MS.gene88895:CDS |
| CATGTCCTATAAACCATTTC+AGG | 0.267175 | 1.1:-70660324 | None:intergenic |
| GGAGTTGAGGGTCAGATTCT+TGG | 0.321871 | 1.1:-70657648 | None:intergenic |
| CTTCTTTCTGCTTGATCACC+AGG | 0.334073 | 1.1:-70657970 | None:intergenic |
| TGCTTTGGTCGCACTTCCGC+AGG | 0.348461 | 1.1:+70657721 | MS.gene88895:CDS |
| ATCACCAATGTCAACGATAA+TGG | 0.368141 | 1.1:-70660226 | None:intergenic |
| TTGTTATTCTGGACCTGAAA+TGG | 0.369570 | 1.1:+70660311 | MS.gene88895:CDS |
| CTGATGTTATTTGCAGTAGA+AGG | 0.376579 | 1.1:+70657502 | None:intergenic |
| TGTGCCTCCTTTGTCTGCTT+TGG | 0.387522 | 1.1:+70657706 | MS.gene88895:CDS |
| CTTGGTCTACCAACTGGTAA+TGG | 0.398010 | 1.1:-70657630 | None:intergenic |
| TGGAGGATTCTTCTCTGCTT+CGG | 0.400442 | 1.1:+70657525 | MS.gene88895:CDS |
| TCAGATGATGAATATGATAA+TGG | 0.406348 | 1.1:+70661007 | MS.gene88895:CDS |
| TCTTCTCTGCTTCGGCTTCA+GGG | 0.410976 | 1.1:+70657533 | MS.gene88895:CDS |
| ACCTGATGCGTCTTGCTCAT+TGG | 0.415636 | 1.1:-70657929 | None:intergenic |
| GCGGGAAAGGCGATTCTTTG+TGG | 0.428089 | 1.1:-70657680 | None:intergenic |
| CCTCATTCCTTTGACCCAAA+AGG | 0.437528 | 1.1:-70657579 | None:intergenic |
| TGATAACAATGATGGTATAA+AGG | 0.444241 | 1.1:+70657846 | MS.gene88895:CDS |
| TCCTTTCCATCATTAGAAAC+CGG | 0.451042 | 1.1:-70657808 | None:intergenic |
| TGCAGCTATGGTGTTTACCT+TGG | 0.453966 | 1.1:+70660283 | MS.gene88895:CDS |
| TGGAAGCCAGCTGGAGTTGA+GGG | 0.459813 | 1.1:-70657660 | None:intergenic |
| TGGTGAAACATCATGTTGTT+GGG | 0.460560 | 1.1:-70657779 | None:intergenic |
| ACCAATGAGCAAGACGCATC+AGG | 0.466072 | 1.1:+70657928 | MS.gene88895:CDS |
| CAGATTCTTGGTCTACCAAC+TGG | 0.473927 | 1.1:-70657636 | None:intergenic |
| AGGAGGCACACCCGCGGGAA+AGG | 0.474287 | 1.1:-70657693 | None:intergenic |
| CTCTTAAAAGTAGCATTAGA+AGG | 0.478292 | 1.1:+70657872 | MS.gene88895:CDS |
| GTTCCACGGTGCAACTCTCA+TGG | 0.480426 | 1.1:-70657608 | None:intergenic |
| TGGGTTGGTCCGACTTTAAG+AGG | 0.483807 | 1.1:-70657760 | None:intergenic |
| GGGCTACCGGTTTCTAATGA+TGG | 0.487640 | 1.1:+70657802 | MS.gene88895:CDS |
| GTGGAAGCCAGCTGGAGTTG+AGG | 0.488108 | 1.1:-70657661 | None:intergenic |
| CAACAACATGATGTTTCACC+AGG | 0.491096 | 1.1:+70657781 | MS.gene88895:CDS |
| CTGGTGAAACATCATGTTGT+TGG | 0.491892 | 1.1:-70657780 | None:intergenic |
| TTCAATTTACATTATCGCAC+AGG | 0.500378 | 1.1:-70661047 | None:intergenic |
| ATCTGACCCTCAACTCCAGC+TGG | 0.500906 | 1.1:+70657654 | MS.gene88895:CDS |
| GGACATGTCGTTTGTACTCC+TGG | 0.502337 | 1.1:+70657952 | MS.gene88895:CDS |
| TGAAGCAAGGAGTGGCGCTT+CGG | 0.507113 | 1.1:+70658670 | MS.gene88895:intron |
| TGATGTTTCACCAGGGCTAC+CGG | 0.511052 | 1.1:+70657789 | MS.gene88895:CDS |
| AAAGCTTGAGGAGAGGCATA+TGG | 0.514117 | 1.1:-70658696 | None:intergenic |
| TTCCTTCAACTGCAGTGAAG+TGG | 0.515417 | 1.1:+70660979 | MS.gene88895:intron |
| GACAAAGGAGGCACACCCGC+GGG | 0.516351 | 1.1:-70657698 | None:intergenic |
| CATATAGATGATAACAATGA+TGG | 0.521660 | 1.1:+70657838 | MS.gene88895:CDS |
| TCATTAGAAACCGGTAGCCC+TGG | 0.527877 | 1.1:-70657799 | None:intergenic |
| GATTCTTTGTGGAAGCCAGC+TGG | 0.528710 | 1.1:-70657669 | None:intergenic |
| TTATTTGCAGTAGAAGGTGG+AGG | 0.532906 | 1.1:+70657508 | MS.gene88895:CDS |
| GACCCAAAAGGAGTAGGCTC+AGG | 0.534302 | 1.1:-70657567 | None:intergenic |
| CTGGTGATCAAGCAGAAAGA+AGG | 0.536495 | 1.1:+70657971 | MS.gene88895:CDS |
| GAAACATCATGTTGTTGGGT+TGG | 0.541784 | 1.1:-70657775 | None:intergenic |
| AGCACCATTATCGTTGACAT+TGG | 0.544239 | 1.1:+70660222 | MS.gene88895:CDS |
| ATTATCGTTGACATTGGTGA+TGG | 0.545602 | 1.1:+70660228 | MS.gene88895:CDS |
| TTCCACGGTGCAACTCTCAT+GGG | 0.559762 | 1.1:-70657607 | None:intergenic |
| GTCAACGATAATGGTGCTGA+AGG | 0.560710 | 1.1:-70660217 | None:intergenic |
| AGACAAAGGAGGCACACCCG+CGG | 0.568338 | 1.1:-70657699 | None:intergenic |
| CAAAGAATCGCCTTTCCCGC+GGG | 0.568676 | 1.1:+70657683 | MS.gene88895:CDS |
| TTCGGCTTCAGGGTATAGCA+AGG | 0.570156 | 1.1:+70657543 | MS.gene88895:CDS |
| GGTCCGACTTTAAGAGGTGA+TGG | 0.570924 | 1.1:-70657754 | None:intergenic |
| ATGTTATTTGCAGTAGAAGG+TGG | 0.573304 | 1.1:+70657505 | MS.gene88895:CDS |
| ACCAACTGGTAATGGTTCCA+CGG | 0.576625 | 1.1:-70657622 | None:intergenic |
| ACCGGTTTCTAATGATGGAA+AGG | 0.577810 | 1.1:+70657807 | MS.gene88895:CDS |
| GCTTTGGTCGCACTTCCGCA+GGG | 0.579792 | 1.1:+70657722 | MS.gene88895:CDS |
| ACAAAGAATCGCCTTTCCCG+CGG | 0.591445 | 1.1:+70657682 | MS.gene88895:CDS |
| TTCAACTGCAGTGAAGTGGA+TGG | 0.592726 | 1.1:+70660983 | MS.gene88895:intron |
| TCCTTTGACCCAAAAGGAGT+AGG | 0.598947 | 1.1:-70657573 | None:intergenic |
| TGTGGGAAGGAATGCAGCTA+TGG | 0.599320 | 1.1:+70660271 | MS.gene88895:CDS |
| TAATAAATCAGTTTCTGTTG+AGG | 0.605165 | 1.1:+70657903 | MS.gene88895:CDS |
| AAATACGAGAATTTGAGCCC+AGG | 0.614035 | 1.1:+70658034 | MS.gene88895:CDS |
| CCAGAATAACAAGTAAGCCA+AGG | 0.616750 | 1.1:-70660300 | None:intergenic |
| CAGAAAGAAGGAGAGTGCAG+TGG | 0.619006 | 1.1:+70657983 | MS.gene88895:CDS |
| TTGTTATCATCTATATGAGA+GGG | 0.619691 | 1.1:-70657832 | None:intergenic |
| CACAGACACCCAAAAGCTTG+AGG | 0.620393 | 1.1:-70658708 | None:intergenic |
| TCGGCTTCAGGGTATAGCAA+GGG | 0.629191 | 1.1:+70657544 | MS.gene88895:CDS |
| ATTGTTATCATCTATATGAG+AGG | 0.632848 | 1.1:-70657833 | None:intergenic |
| ACCGTGGAACCATTACCAGT+TGG | 0.634769 | 1.1:+70657621 | MS.gene88895:CDS |
| AGTGCGACCAAAGCAGACAA+AGG | 0.639795 | 1.1:-70657713 | None:intergenic |
| ACTCCATCACCTCTTAAAGT+CGG | 0.647699 | 1.1:+70657751 | MS.gene88895:CDS |
| GAAACTGATTTATTACTGTG+TGG | 0.656477 | 1.1:-70657895 | None:intergenic |
| GCGACCAAAGCAGACAAAGG+AGG | 0.660173 | 1.1:-70657710 | None:intergenic |
| AATGAGCAAGACGCATCAGG+TGG | 0.664133 | 1.1:+70657931 | MS.gene88895:CDS |
| ACACCCAAAAGCTTGAGGAG+AGG | 0.681513 | 1.1:-70658703 | None:intergenic |
| GTGCAGTGGACAGATGCTTG+CGG | 0.709323 | 1.1:+70657997 | MS.gene88895:CDS |
| AACAACATGATGTTTCACCA+GGG | 0.731260 | 1.1:+70657782 | MS.gene88895:CDS |
| TGATGGAGTATCATGCCCTG+CGG | 0.746184 | 1.1:-70657737 | None:intergenic |
| AACCCATGAGAGTTGCACCG+TGG | 0.749362 | 1.1:+70657605 | MS.gene88895:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATGCAAAAAAAAAAAAA+GGG | + | chr1.1:70659043-70659062 | MS.gene88895:intron | 10.0% |
| !! | AAAAATGATCATAATAGAAT+AGG | - | chr1.1:70658942-70658961 | None:intergenic | 15.0% |
| !! | AAATAAAATATTCAAATACC+TGG | - | chr1.1:70658055-70658074 | None:intergenic | 15.0% |
| !! | AAATACAAATCAAATCAAAT+GGG | - | chr1.1:70659479-70659498 | None:intergenic | 15.0% |
| !! | AATAAAATATTCAAATACCT+GGG | - | chr1.1:70658054-70658073 | None:intergenic | 15.0% |
| !! | GTTTATGCAAAAAAAAAAAA+AGG | + | chr1.1:70659042-70659061 | MS.gene88895:intron | 15.0% |
| !! | TAAATACAAATCAAATCAAA+TGG | - | chr1.1:70659480-70659499 | None:intergenic | 15.0% |
| !! | TTGAAAAAATGTTTATAAGT+AGG | + | chr1.1:70659748-70659767 | MS.gene88895:intron | 15.0% |
| !! | TTTATATGATGTTTGATTAA+TGG | + | chr1.1:70658783-70658802 | MS.gene88895:intron | 15.0% |
| !!! | AGGTGAATAATAATAAATTT+TGG | + | chr1.1:70658736-70658755 | MS.gene88895:intron | 15.0% |
| !!! | ATTATACAATTTTAGATTAG+AGG | + | chr1.1:70658119-70658138 | MS.gene88895:intron | 15.0% |
| !!! | CTAAACAATTTTTTTTTACA+GGG | - | chr1.1:70659116-70659135 | None:intergenic | 15.0% |
| !!! | GGTGAATAATAATAAATTTT+GGG | + | chr1.1:70658737-70658756 | MS.gene88895:intron | 15.0% |
| !!! | TAAACAATTTTTTTTTACAG+GGG | - | chr1.1:70659115-70659134 | None:intergenic | 15.0% |
| !!! | TAATTTCTTTTGATCTATTT+TGG | + | chr1.1:70658637-70658656 | MS.gene88895:intron | 15.0% |
| !!! | TCTAAACAATTTTTTTTTAC+AGG | - | chr1.1:70659117-70659136 | None:intergenic | 15.0% |
| !! | AAAAAATGTTTATAAGTAGG+AGG | + | chr1.1:70659751-70659770 | MS.gene88895:intron | 20.0% |
| !! | AAAACAAAAACCAAACAAAT+CGG | - | chr1.1:70658877-70658896 | None:intergenic | 20.0% |
| !! | ACTAGAATAGAAAAAGTTTA+TGG | + | chr1.1:70660654-70660673 | MS.gene88895:intron | 20.0% |
| !! | AGAAATTAATTCAAATTTGC+AGG | - | chr1.1:70658625-70658644 | None:intergenic | 20.0% |
| !! | ATTAAGTAGAATACATAACA+TGG | + | chr1.1:70659908-70659927 | MS.gene88895:intron | 20.0% |
| !! | TATCATATAGAATCAATTAC+AGG | - | chr1.1:70660953-70660972 | None:intergenic | 20.0% |
| !! | TATTGTTGAACGTAATAAAT+TGG | - | chr1.1:70659401-70659420 | None:intergenic | 20.0% |
| !! | TCCTGACAATAAAATAAAAT+CGG | - | chr1.1:70658155-70658174 | None:intergenic | 20.0% |
| !!! | AAACAATTTTTTTTTACAGG+GGG | - | chr1.1:70659114-70659133 | None:intergenic | 20.0% |
| !!! | AAAGAATGAAAAAAAGTACA+TGG | - | chr1.1:70660026-70660045 | None:intergenic | 20.0% |
| !!! | AAGAATGAAAAAAAGTACAT+GGG | - | chr1.1:70660025-70660044 | None:intergenic | 20.0% |
| !!! | AGTTGTCTTTAATTTTCAAA+TGG | - | chr1.1:70658556-70658575 | None:intergenic | 20.0% |
| !!! | ATCAAACAAAATAAAGTATC+AGG | - | chr1.1:70658188-70658207 | None:intergenic | 20.0% |
| !!! | ATTTTATTTTCCGATTTGTT+TGG | + | chr1.1:70658864-70658883 | MS.gene88895:intron | 20.0% |
| !!! | CAAAGAATTTTCAAATTACA+AGG | - | chr1.1:70659146-70659165 | None:intergenic | 20.0% |
| !!! | TTTTTGACCTTTATAATTAG+AGG | + | chr1.1:70658893-70658912 | MS.gene88895:intron | 20.0% |
| ! | AATTACTTTCAATCAAGTCT+TGG | - | chr1.1:70660681-70660700 | None:intergenic | 25.0% |
| ! | ACAGCATATACACAAATTAA+TGG | - | chr1.1:70660845-70660864 | None:intergenic | 25.0% |
| ! | ACTATATGCTTGCATAATAT+TGG | - | chr1.1:70660722-70660741 | None:intergenic | 25.0% |
| ! | ATACCTGTTATTATATGAGT+TGG | + | chr1.1:70660866-70660885 | MS.gene88895:intron | 25.0% |
| ! | ATATGTTAAAATTCCCACAT+TGG | + | chr1.1:70659713-70659732 | MS.gene88895:intron | 25.0% |
| ! | ATTGTTATCATCTATATGAG+AGG | - | chr1.1:70657836-70657855 | None:intergenic | 25.0% |
| ! | CATATAGATGATAACAATGA+TGG | + | chr1.1:70657838-70657857 | MS.gene88895:CDS | 25.0% |
| ! | CCTGACAATAAAATAAAATC+GGG | - | chr1.1:70658154-70658173 | None:intergenic | 25.0% |
| ! | CTATATGCTTGCATAATATT+GGG | - | chr1.1:70660721-70660740 | None:intergenic | 25.0% |
| ! | GAAGATCATAAAAGTAATAC+AGG | - | chr1.1:70659337-70659356 | None:intergenic | 25.0% |
| ! | GACTTGATTGAAAGTAATTT+AGG | + | chr1.1:70660682-70660701 | MS.gene88895:intron | 25.0% |
| ! | TAAATGATGTTCCAATAAAC+AGG | - | chr1.1:70659521-70659540 | None:intergenic | 25.0% |
| ! | TAAGATAAAATCAAATCCCT+TGG | - | chr1.1:70659450-70659469 | None:intergenic | 25.0% |
| ! | TAATAAATCAGTTTCTGTTG+AGG | + | chr1.1:70657903-70657922 | MS.gene88895:CDS | 25.0% |
| ! | TCAGATGATGAATATGATAA+TGG | + | chr1.1:70661007-70661026 | MS.gene88895:CDS | 25.0% |
| ! | TGATAACAATGATGGTATAA+AGG | + | chr1.1:70657846-70657865 | MS.gene88895:CDS | 25.0% |
| ! | TTAAGGATCTACAAGTTTAA+TGG | - | chr1.1:70658489-70658508 | None:intergenic | 25.0% |
| ! | TTAGAAGCAGTATTTAACAT+TGG | - | chr1.1:70660115-70660134 | None:intergenic | 25.0% |
| ! | TTGAATTAAGCATTACTCTT+TGG | + | chr1.1:70659806-70659825 | MS.gene88895:intron | 25.0% |
| ! | TTGTTATCATCTATATGAGA+GGG | - | chr1.1:70657835-70657854 | None:intergenic | 25.0% |
| ! | TTGTTCATTCCAAATGATAT+CGG | + | chr1.1:70658447-70658466 | MS.gene88895:intron | 25.0% |
| ! | TTTGTAGTCAAAATTCATGA+AGG | - | chr1.1:70659176-70659195 | None:intergenic | 25.0% |
| !! | GAATTTTCAAATTACAAGGT+TGG | - | chr1.1:70659142-70659161 | None:intergenic | 25.0% |
| !! | TGTTGTTTATAAACTTCTTG+AGG | - | chr1.1:70658973-70658992 | None:intergenic | 25.0% |
| !! | TTTTACATTTGATTGATCTG+TGG | - | chr1.1:70660090-70660109 | None:intergenic | 25.0% |
| AAGTTATATCTCTTCCAATG+TGG | - | chr1.1:70659730-70659749 | None:intergenic | 30.0% | |
| AGAAACCGTTAATATTACAG+GGG | - | chr1.1:70659085-70659104 | None:intergenic | 30.0% | |
| AGAATAGGAACAATGATAGA+GGG | - | chr1.1:70658927-70658946 | None:intergenic | 30.0% | |
| AGTTATATCTCTTCCAATGT+GGG | - | chr1.1:70659729-70659748 | None:intergenic | 30.0% | |
| ATACCATGTAGAAAGTAATG+GGG | - | chr1.1:70659598-70659617 | None:intergenic | 30.0% | |
| ATATAGAATCAATTACAGGC+AGG | - | chr1.1:70660949-70660968 | None:intergenic | 30.0% | |
| ATCCTCAACAGATCTATATA+TGG | - | chr1.1:70659626-70659645 | None:intergenic | 30.0% | |
| ATGTAAAATTCCTTAGAGCT+TGG | - | chr1.1:70658425-70658444 | None:intergenic | 30.0% | |
| CAACCAACTCATATAATAAC+AGG | - | chr1.1:70660872-70660891 | None:intergenic | 30.0% | |
| CACGAAAACAAACAATAACA+AGG | - | chr1.1:70660918-70660937 | None:intergenic | 30.0% | |
| CAGAAACCGTTAATATTACA+GGG | - | chr1.1:70659086-70659105 | None:intergenic | 30.0% | |
| CATGTTTATTACTACAGTCT+AGG | - | chr1.1:70659565-70659584 | None:intergenic | 30.0% | |
| CTACTTAATCTCTATGAACA+AGG | - | chr1.1:70659897-70659916 | None:intergenic | 30.0% | |
| CTCTTAAAAGTAGCATTAGA+AGG | + | chr1.1:70657872-70657891 | MS.gene88895:CDS | 30.0% | |
| GACATGCAGTTTATATGAAT+AGG | - | chr1.1:70660178-70660197 | None:intergenic | 30.0% | |
| GATACCATGTAGAAAGTAAT+GGG | - | chr1.1:70659599-70659618 | None:intergenic | 30.0% | |
| GTATAATAGTACGAAGAGAA+AGG | - | chr1.1:70658106-70658125 | None:intergenic | 30.0% | |
| TAATCTCTATGAACAAGGTA+AGG | - | chr1.1:70659892-70659911 | None:intergenic | 30.0% | |
| TAGAATAGGAACAATGATAG+AGG | - | chr1.1:70658928-70658947 | None:intergenic | 30.0% | |
| TCGATATCAGCTGTAATAAA+AGG | + | chr1.1:70658075-70658094 | MS.gene88895:intron | 30.0% | |
| TGAAACTGGAAGAAAACTAT+AGG | + | chr1.1:70660625-70660644 | MS.gene88895:intron | 30.0% | |
| TGATACCATGTAGAAAGTAA+TGG | - | chr1.1:70659600-70659619 | None:intergenic | 30.0% | |
| TGCAAAAGAATTGGTTGTTA+GGG | + | chr1.1:70660459-70660478 | MS.gene88895:intron | 30.0% | |
| TGTAAAATTCCTTAGAGCTT+GGG | - | chr1.1:70658424-70658443 | None:intergenic | 30.0% | |
| TTATAGGACATGACATGATT+TGG | + | chr1.1:70660335-70660354 | MS.gene88895:intron | 30.0% | |
| TTGCAAAAGAATTGGTTGTT+AGG | + | chr1.1:70660458-70660477 | MS.gene88895:intron | 30.0% | |
| ! | AAGGCATCCTCTAATTATAA+AGG | - | chr1.1:70658903-70658922 | None:intergenic | 30.0% |
| ! | ACAAAATTGATGATATGCCA+GGG | + | chr1.1:70659191-70659210 | MS.gene88895:intron | 30.0% |
| ! | AGTTTTCTTCCAGTTTCAAT+TGG | - | chr1.1:70660623-70660642 | None:intergenic | 30.0% |
| ! | ATTTTATTGTCAGGACACAT+GGG | + | chr1.1:70658160-70658179 | MS.gene88895:intron | 30.0% |
| ! | GAAACTGATTTATTACTGTG+TGG | - | chr1.1:70657898-70657917 | None:intergenic | 30.0% |
| ! | TACAAAATTGATGATATGCC+AGG | + | chr1.1:70659190-70659209 | MS.gene88895:intron | 30.0% |
| ! | TATTTTATTGTCAGGACACA+TGG | + | chr1.1:70658159-70658178 | MS.gene88895:intron | 30.0% |
| ! | TGGAATTTTATGATGAAGCA+AGG | + | chr1.1:70658657-70658676 | MS.gene88895:intron | 30.0% |
| ! | TTTAAGATGTGGTATCAACA+TGG | - | chr1.1:70660001-70660020 | None:intergenic | 30.0% |
| !! | AAGTGGTTTTGCAAAAGAAT+TGG | + | chr1.1:70660450-70660469 | MS.gene88895:intron | 30.0% |
| !! | ACATCTTTAGGATAATCCAA+GGG | + | chr1.1:70659431-70659450 | MS.gene88895:intron | 30.0% |
| !! | GAATTTTAACATATCCTCTC+AGG | - | chr1.1:70659707-70659726 | None:intergenic | 30.0% |
| !!! | CCCGATTTTATTTTATTGTC+AGG | + | chr1.1:70658151-70658170 | MS.gene88895:intron | 30.0% |
| !!! | CTTGTTATTGTTTGTTTTCG+TGG | + | chr1.1:70660916-70660935 | MS.gene88895:intron | 30.0% |
| AAACCGTTAATATTACAGGG+GGG | - | chr1.1:70659083-70659102 | None:intergenic | 35.0% | |
| AACAACATGATGTTTCACCA+GGG | + | chr1.1:70657782-70657801 | MS.gene88895:CDS | 35.0% | |
| ACATCAGTTGTCCTGTTTAT+TGG | + | chr1.1:70659507-70659526 | MS.gene88895:intron | 35.0% | |
| AGAAACAACCAACATGGATT+TGG | - | chr1.1:70659302-70659321 | None:intergenic | 35.0% | |
| AGCCATATATAGATCTGTTG+AGG | + | chr1.1:70659621-70659640 | MS.gene88895:intron | 35.0% | |
| AGTACAACTCTACAAGCATT+AGG | - | chr1.1:70660155-70660174 | None:intergenic | 35.0% | |
| ATCACCAATGTCAACGATAA+TGG | - | chr1.1:70660229-70660248 | None:intergenic | 35.0% | |
| ATGAATGAGATATGCTAGGA+TGG | + | chr1.1:70658220-70658239 | MS.gene88895:intron | 35.0% | |
| ATGCAGCGAATACAAAGATT+TGG | - | chr1.1:70658283-70658302 | None:intergenic | 35.0% | |
| ATGGAATCTGTCCAAAAAAC+TGG | + | chr1.1:70660247-70660266 | MS.gene88895:CDS | 35.0% | |
| ATTATCGTTGACATTGGTGA+TGG | + | chr1.1:70660228-70660247 | MS.gene88895:CDS | 35.0% | |
| CAAACCAGATTGTATTGTGA+GGG | - | chr1.1:70659780-70659799 | None:intergenic | 35.0% | |
| CACTAAAGAAACAACCAACA+TGG | - | chr1.1:70659308-70659327 | None:intergenic | 35.0% | |
| CATGTCCTATAAACCATTTC+AGG | - | chr1.1:70660327-70660346 | None:intergenic | 35.0% | |
| CCAGAAACCGTTAATATTAC+AGG | - | chr1.1:70659087-70659106 | None:intergenic | 35.0% | |
| CCTGTAATATTAACGGTTTC+TGG | + | chr1.1:70659084-70659103 | MS.gene88895:intron | 35.0% | |
| CTTGGATTATCCTAAAGATG+TGG | - | chr1.1:70659432-70659451 | None:intergenic | 35.0% | |
| CTTGTATATTGCCACTAGTT+TGG | + | chr1.1:70659844-70659863 | MS.gene88895:intron | 35.0% | |
| GAAACCGTTAATATTACAGG+GGG | - | chr1.1:70659084-70659103 | None:intergenic | 35.0% | |
| GATCTACAAGTTTAATGGTC+CGG | - | chr1.1:70658484-70658503 | None:intergenic | 35.0% | |
| GATTAATGGCCATTGTAATC+TGG | + | chr1.1:70658797-70658816 | MS.gene88895:intron | 35.0% | |
| GTGTATGAATGAGATATGCT+AGG | + | chr1.1:70658216-70658235 | MS.gene88895:intron | 35.0% | |
| TAAGTCTTTGCCACATCTTT+AGG | + | chr1.1:70659419-70659438 | MS.gene88895:intron | 35.0% | |
| TAGCATACCTAGAAAGAAGA+AGG | - | chr1.1:70659015-70659034 | None:intergenic | 35.0% | |
| TCCAAGAAACCAGATTACAA+TGG | - | chr1.1:70658809-70658828 | None:intergenic | 35.0% | |
| TCCTTTCCATCATTAGAAAC+CGG | - | chr1.1:70657811-70657830 | None:intergenic | 35.0% | |
| TCTATGAACAAGGTAAGGTA+TGG | - | chr1.1:70659887-70659906 | None:intergenic | 35.0% | |
| TCTGTTGTTGCATATTGAAG+TGG | + | chr1.1:70660433-70660452 | MS.gene88895:intron | 35.0% | |
| TGCAGCGAATACAAAGATTT+GGG | - | chr1.1:70658282-70658301 | None:intergenic | 35.0% | |
| TGCATTTCATACCAAACTAG+TGG | - | chr1.1:70659858-70659877 | None:intergenic | 35.0% | |
| TGGTGAAACATCATGTTGTT+GGG | - | chr1.1:70657782-70657801 | None:intergenic | 35.0% | |
| TTACTCTTTGGTTGATCTGT+AGG | + | chr1.1:70659818-70659837 | MS.gene88895:intron | 35.0% | |
| TTCATTGGACCGATATCATT+TGG | - | chr1.1:70658459-70658478 | None:intergenic | 35.0% | |
| TTTCCCCATTACTTTCTACA+TGG | + | chr1.1:70659592-70659611 | MS.gene88895:intron | 35.0% | |
| TTTGTGTTTGTGTCGAGATT+TGG | + | chr1.1:70659374-70659393 | MS.gene88895:intron | 35.0% | |
| ! | AAAATTGATGATATGCCAGG+GGG | + | chr1.1:70659193-70659212 | MS.gene88895:intron | 35.0% |
| ! | AACTCGATTTAGAACTAGGA+AGG | + | chr1.1:70658828-70658847 | MS.gene88895:intron | 35.0% |
| ! | ATGTTATTTGCAGTAGAAGG+TGG | + | chr1.1:70657505-70657524 | MS.gene88895:CDS | 35.0% |
| ! | CAAAATTGATGATATGCCAG+GGG | + | chr1.1:70659192-70659211 | MS.gene88895:intron | 35.0% |
| ! | GAAATTTGCTCAGATTACAG+GGG | + | chr1.1:70659222-70659241 | MS.gene88895:intron | 35.0% |
| ! | GGAAATTTGCTCAGATTACA+GGG | + | chr1.1:70659221-70659240 | MS.gene88895:intron | 35.0% |
| ! | TGTTGCTTCTAGTTAAGTCA+GGG | + | chr1.1:70660595-70660614 | MS.gene88895:intron | 35.0% |
| ! | TTGGAACTCGATTTAGAACT+AGG | + | chr1.1:70658824-70658843 | MS.gene88895:intron | 35.0% |
| ! | TTGTTATTCTGGACCTGAAA+TGG | + | chr1.1:70660311-70660330 | MS.gene88895:CDS | 35.0% |
| ! | TTGTTGCTTCTAGTTAAGTC+AGG | + | chr1.1:70660594-70660613 | MS.gene88895:intron | 35.0% |
| ! | TTTTATGATGAAGCAAGGAG+TGG | + | chr1.1:70658662-70658681 | MS.gene88895:intron | 35.0% |
| ! | TTTTCCTCCTTCTTCTTTCT+AGG | + | chr1.1:70659005-70659024 | MS.gene88895:intron | 35.0% |
| !! | AACTTCTAGCATTTAGCTTG+AGG | + | chr1.1:70658317-70658336 | MS.gene88895:intron | 35.0% |
| !! | ATGCTATGTTGACTTGGAAA+AGG | + | chr1.1:70660523-70660542 | MS.gene88895:intron | 35.0% |
| !! | CAAATTTGCTGTAGTGTCAT+CGG | + | chr1.1:70659932-70659951 | MS.gene88895:intron | 35.0% |
| !! | CACATCTTTAGGATAATCCA+AGG | + | chr1.1:70659430-70659449 | MS.gene88895:intron | 35.0% |
| !! | GTTTTACTTCTGAGAGATGA+AGG | + | chr1.1:70658358-70658377 | MS.gene88895:intron | 35.0% |
| !! | TTTTGCATGCTATGTTGACT+TGG | + | chr1.1:70660517-70660536 | MS.gene88895:intron | 35.0% |
| !!! | AGTACATGGGTTTTAAGATG+TGG | - | chr1.1:70660012-70660031 | None:intergenic | 35.0% |
| AAATACGAGAATTTGAGCCC+AGG | + | chr1.1:70658034-70658053 | MS.gene88895:CDS | 40.0% | |
| AACATGGAAAAAGCCTAACC+AGG | - | chr1.1:70659985-70660004 | None:intergenic | 40.0% | |
| ACATTAGAGATGTCTAGTCC+TGG | + | chr1.1:70659680-70659699 | MS.gene88895:intron | 40.0% | |
| ACTCCATCACCTCTTAAAGT+CGG | + | chr1.1:70657751-70657770 | MS.gene88895:CDS | 40.0% | |
| AGCACCATTATCGTTGACAT+TGG | + | chr1.1:70660222-70660241 | MS.gene88895:CDS | 40.0% | |
| AGCATTAGGCTGTAAAGCTT+CGG | - | chr1.1:70660141-70660160 | None:intergenic | 40.0% | |
| AGGACTAGACATCTCTAATG+TGG | - | chr1.1:70659681-70659700 | None:intergenic | 40.0% | |
| CAAACAAGCTAACTGCAGTA+CGG | - | chr1.1:70660787-70660806 | None:intergenic | 40.0% | |
| CAAATTGAGTGTTCACATGC+GGG | + | chr1.1:70659955-70659974 | MS.gene88895:intron | 40.0% | |
| CAACAACATGATGTTTCACC+AGG | + | chr1.1:70657781-70657800 | MS.gene88895:CDS | 40.0% | |
| CATACCTAGAAAGAAGAAGG+AGG | - | chr1.1:70659012-70659031 | None:intergenic | 40.0% | |
| CCAAACCAGATTGTATTGTG+AGG | - | chr1.1:70659781-70659800 | None:intergenic | 40.0% | |
| CCAGAATAACAAGTAAGCCA+AGG | - | chr1.1:70660303-70660322 | None:intergenic | 40.0% | |
| CCTCACAATACAATCTGGTT+TGG | + | chr1.1:70659778-70659797 | MS.gene88895:intron | 40.0% | |
| CTGGACCTGAAATGGTTTAT+AGG | + | chr1.1:70660319-70660338 | MS.gene88895:intron | 40.0% | |
| CTGGTGAAACATCATGTTGT+TGG | - | chr1.1:70657783-70657802 | None:intergenic | 40.0% | |
| CTGTCCAAAAAACTGGATGT+GGG | + | chr1.1:70660254-70660273 | MS.gene88895:CDS | 40.0% | |
| CTTGGAAAAGGTTGTTACTG+TGG | + | chr1.1:70660535-70660554 | MS.gene88895:intron | 40.0% | |
| GAAACATCATGTTGTTGGGT+TGG | - | chr1.1:70657778-70657797 | None:intergenic | 40.0% | |
| GCAAATTGAGTGTTCACATG+CGG | + | chr1.1:70659954-70659973 | MS.gene88895:intron | 40.0% | |
| GTTCTACACCAAATCCATGT+TGG | + | chr1.1:70659291-70659310 | MS.gene88895:intron | 40.0% | |
| TAATGGTTGTCAACCTGTCA+GGG | - | chr1.1:70660828-70660847 | None:intergenic | 40.0% | |
| TATAGCTTTCCCAAGCTCTA+AGG | + | chr1.1:70658412-70658431 | MS.gene88895:intron | 40.0% | |
| TCTGCCACATCAGCAAATTA+TGG | + | chr1.1:70660566-70660585 | MS.gene88895:intron | 40.0% | |
| TCTGTCCAAAAAACTGGATG+TGG | + | chr1.1:70660253-70660272 | MS.gene88895:CDS | 40.0% | |
| TTAATGGTTGTCAACCTGTC+AGG | - | chr1.1:70660829-70660848 | None:intergenic | 40.0% | |
| TTATTTGCAGTAGAAGGTGG+AGG | + | chr1.1:70657508-70657527 | MS.gene88895:CDS | 40.0% | |
| TTGCCCCCCTGTAATATTAA+CGG | + | chr1.1:70659077-70659096 | MS.gene88895:intron | 40.0% | |
| TTTAATGGTCCGGCATTCAT+TGG | - | chr1.1:70658474-70658493 | None:intergenic | 40.0% | |
| TTTGTACACCTATGCGTAGA+AGG | - | chr1.1:70658519-70658538 | None:intergenic | 40.0% | |
| ! | ACATGACATGATTTGGAGAC+AGG | + | chr1.1:70660342-70660361 | MS.gene88895:intron | 40.0% |
| ! | ACCGGTTTCTAATGATGGAA+AGG | + | chr1.1:70657807-70657826 | MS.gene88895:CDS | 40.0% |
| ! | CGGAAATTTGCTCAGATTAC+AGG | + | chr1.1:70659220-70659239 | MS.gene88895:intron | 40.0% |
| ! | GCCATTGTAATCTGGTTTCT+TGG | + | chr1.1:70658805-70658824 | MS.gene88895:intron | 40.0% |
| !! | CCTTGGCTTACTTGTTATTC+TGG | + | chr1.1:70660300-70660319 | MS.gene88895:CDS | 40.0% |
| AGGAACAATGATAGAGGGCA+AGG | - | chr1.1:70658922-70658941 | None:intergenic | 45.0% | |
| ATCCAACTCCTTCTACGCAT+AGG | + | chr1.1:70658508-70658527 | MS.gene88895:intron | 45.0% | |
| ATCCACTTCACTGCAGTTGA+AGG | - | chr1.1:70660984-70661003 | None:intergenic | 45.0% | |
| ATGATATGCCAGGGGGTAAA+CGG | + | chr1.1:70659200-70659219 | MS.gene88895:intron | 45.0% | |
| CAGATTCTTGGTCTACCAAC+TGG | - | chr1.1:70657639-70657658 | None:intergenic | 45.0% | |
| CCAAAAAACTGGATGTGGGA+AGG | + | chr1.1:70660258-70660277 | MS.gene88895:CDS | 45.0% | |
| CCTCATTCCTTTGACCCAAA+AGG | - | chr1.1:70657582-70657601 | None:intergenic | 45.0% | |
| CTGGTGATCAAGCAGAAAGA+AGG | + | chr1.1:70657971-70657990 | MS.gene88895:CDS | 45.0% | |
| CTTCTTTCTGCTTGATCACC+AGG | - | chr1.1:70657973-70657992 | None:intergenic | 45.0% | |
| CTTGGTCTACCAACTGGTAA+TGG | - | chr1.1:70657633-70657652 | None:intergenic | 45.0% | |
| GATATCGGTCCAATGAATGC+CGG | + | chr1.1:70658462-70658481 | MS.gene88895:intron | 45.0% | |
| GCATCCCTCACAATACAATC+TGG | + | chr1.1:70659773-70659792 | MS.gene88895:intron | 45.0% | |
| GCGTAGAAGGAGTTGGATTA+AGG | - | chr1.1:70658506-70658525 | None:intergenic | 45.0% | |
| GTCAGGGATCCAATTGAAAC+TGG | + | chr1.1:70660611-70660630 | MS.gene88895:intron | 45.0% | |
| TAACATATCCTCTCAGGACC+AGG | - | chr1.1:70659701-70659720 | None:intergenic | 45.0% | |
| TCCTTTGACCCAAAAGGAGT+AGG | - | chr1.1:70657576-70657595 | None:intergenic | 45.0% | |
| TGCAGCTATGGTGTTTACCT+TGG | + | chr1.1:70660283-70660302 | MS.gene88895:CDS | 45.0% | |
| TGGAGGATTCTTCTCTGCTT+CGG | + | chr1.1:70657525-70657544 | MS.gene88895:CDS | 45.0% | |
| TGGCCTGAGTGGTTTGATAA+CGG | - | chr1.1:70659661-70659680 | None:intergenic | 45.0% | |
| TTCAACTGCAGTGAAGTGGA+TGG | + | chr1.1:70660983-70661002 | MS.gene88895:intron | 45.0% | |
| TTCCTTCAACTGCAGTGAAG+TGG | + | chr1.1:70660979-70660998 | MS.gene88895:intron | 45.0% | |
| TTGTCAACCTGTCAGGGTAT+AGG | - | chr1.1:70660822-70660841 | None:intergenic | 45.0% | |
| ! | AAAGCTTGAGGAGAGGCATA+TGG | - | chr1.1:70658699-70658718 | None:intergenic | 45.0% |
| ! | ATGCCTCTCCTCAAGCTTTT+GGG | + | chr1.1:70658700-70658719 | MS.gene88895:CDS | 45.0% |
| ! | GTCAACGATAATGGTGCTGA+AGG | - | chr1.1:70660220-70660239 | None:intergenic | 45.0% |
| ! | TATGCCTCTCCTCAAGCTTT+TGG | + | chr1.1:70658699-70658718 | MS.gene88895:CDS | 45.0% |
| ! | TGATTTGGAGACAGGCATGT+CGG | + | chr1.1:70660350-70660369 | MS.gene88895:intron | 45.0% |
| !! | ACCAACTGGTAATGGTTCCA+CGG | - | chr1.1:70657625-70657644 | None:intergenic | 45.0% |
| !! | AGCTTTTGGGTGTCTGTGAT+TGG | + | chr1.1:70658713-70658732 | MS.gene88895:CDS | 45.0% |
| !! | CCTTTTGGGTCAAAGGAATG+AGG | + | chr1.1:70657579-70657598 | MS.gene88895:CDS | 45.0% |
| !! | GCTGCCATAATTTGCTGATG+TGG | - | chr1.1:70660573-70660592 | None:intergenic | 45.0% |
| !! | TTTTGGGTGTCTGTGATTGG+AGG | + | chr1.1:70658716-70658735 | MS.gene88895:CDS | 45.0% |
| !!! | CCTTCCCACATCCAGTTTTT+TGG | - | chr1.1:70660261-70660280 | None:intergenic | 45.0% |
| !! | TTGTTTAATAAATATATATT+CGG | - | chr1.1:70660747-70660766 | None:intergenic | 5.0% |
| !!! | AAAAAACATATATTTTTAAA+AGG | - | chr1.1:70658246-70658265 | None:intergenic | 5.0% |
| AACCTGTCAGGGTATAGGAC+AGG | - | chr1.1:70660817-70660836 | None:intergenic | 50.0% | |
| AACCTGTCCTATACCCTGAC+AGG | + | chr1.1:70660812-70660831 | MS.gene88895:intron | 50.0% | |
| AATGAGCAAGACGCATCAGG+TGG | + | chr1.1:70657931-70657950 | MS.gene88895:CDS | 50.0% | |
| ACAAAGAATCGCCTTTCCCG+CGG | + | chr1.1:70657682-70657701 | MS.gene88895:CDS | 50.0% | |
| ACACCCAAAAGCTTGAGGAG+AGG | - | chr1.1:70658706-70658725 | None:intergenic | 50.0% | |
| ACATGCGGGTATACCTGGTT+AGG | + | chr1.1:70659969-70659988 | MS.gene88895:intron | 50.0% | |
| ACCAATGAGCAAGACGCATC+AGG | + | chr1.1:70657928-70657947 | MS.gene88895:CDS | 50.0% | |
| ACCGTGGAACCATTACCAGT+TGG | + | chr1.1:70657621-70657640 | MS.gene88895:CDS | 50.0% | |
| ACCTGATGCGTCTTGCTCAT+TGG | - | chr1.1:70657932-70657951 | None:intergenic | 50.0% | |
| AGCCGCTGAAGAGCTTCTTA+GGG | - | chr1.1:70660055-70660074 | None:intergenic | 50.0% | |
| AGTGCGACCAAAGCAGACAA+AGG | - | chr1.1:70657716-70657735 | None:intergenic | 50.0% | |
| CACAGACACCCAAAAGCTTG+AGG | - | chr1.1:70658711-70658730 | None:intergenic | 50.0% | |
| CACCCGTTATCAAACCACTC+AGG | + | chr1.1:70659655-70659674 | MS.gene88895:intron | 50.0% | |
| CACCTATGCGTAGAAGGAGT+TGG | - | chr1.1:70658513-70658532 | None:intergenic | 50.0% | |
| CATCTCTAATGTGGCCTGAG+TGG | - | chr1.1:70659672-70659691 | None:intergenic | 50.0% | |
| CTAGTGCACAATTTGAGCCG+TGG | + | chr1.1:70660381-70660400 | MS.gene88895:intron | 50.0% | |
| GATTCTTTGTGGAAGCCAGC+TGG | - | chr1.1:70657672-70657691 | None:intergenic | 50.0% | |
| GATTTGGAGACAGGCATGTC+GGG | + | chr1.1:70660351-70660370 | MS.gene88895:intron | 50.0% | |
| GCAAATTTCCGTTTACCCCC+TGG | - | chr1.1:70659211-70659230 | None:intergenic | 50.0% | |
| GGAGTTGAGGGTCAGATTCT+TGG | - | chr1.1:70657651-70657670 | None:intergenic | 50.0% | |
| TCATTAGAAACCGGTAGCCC+TGG | - | chr1.1:70657802-70657821 | None:intergenic | 50.0% | |
| TCCCCTAAGAAGCTCTTCAG+CGG | + | chr1.1:70660050-70660069 | MS.gene88895:intron | 50.0% | |
| TCGGCTTCAGGGTATAGCAA+GGG | + | chr1.1:70657544-70657563 | MS.gene88895:CDS | 50.0% | |
| TCTTCTCTGCTTCGGCTTCA+GGG | + | chr1.1:70657533-70657552 | MS.gene88895:CDS | 50.0% | |
| TGATGTTTCACCAGGGCTAC+CGG | + | chr1.1:70657789-70657808 | MS.gene88895:CDS | 50.0% | |
| TGTGCCTCCTTTGTCTGCTT+TGG | + | chr1.1:70657706-70657725 | MS.gene88895:CDS | 50.0% | |
| TGTGGGAAGGAATGCAGCTA+TGG | + | chr1.1:70660271-70660290 | MS.gene88895:CDS | 50.0% | |
| TGTTCACATGCGGGTATACC+TGG | + | chr1.1:70659964-70659983 | MS.gene88895:intron | 50.0% | |
| TTCCACGGTGCAACTCTCAT+GGG | - | chr1.1:70657610-70657629 | None:intergenic | 50.0% | |
| TTCGGCTTCAGGGTATAGCA+AGG | + | chr1.1:70657543-70657562 | MS.gene88895:CDS | 50.0% | |
| TTCTTCTCTGCTTCGGCTTC+AGG | + | chr1.1:70657532-70657551 | MS.gene88895:CDS | 50.0% | |
| ! | CAGAAAGAAGGAGAGTGCAG+TGG | + | chr1.1:70657983-70658002 | MS.gene88895:CDS | 50.0% |
| ! | GGACATGTCGTTTGTACTCC+TGG | + | chr1.1:70657952-70657971 | MS.gene88895:CDS | 50.0% |
| ! | GGCCTGAGTGGTTTGATAAC+GGG | - | chr1.1:70659660-70659679 | None:intergenic | 50.0% |
| ! | GGTCCGACTTTAAGAGGTGA+TGG | - | chr1.1:70657757-70657776 | None:intergenic | 50.0% |
| ! | TGATGGAGTATCATGCCCTG+CGG | - | chr1.1:70657740-70657759 | None:intergenic | 50.0% |
| !! | CTGAGTGGTTTGATAACGGG+TGG | - | chr1.1:70659657-70659676 | None:intergenic | 50.0% |
| !! | GCCTACTCCTTTTGGGTCAA+AGG | + | chr1.1:70657572-70657591 | MS.gene88895:CDS | 50.0% |
| !! | GGGCTACCGGTTTCTAATGA+TGG | + | chr1.1:70657802-70657821 | MS.gene88895:CDS | 50.0% |
| !! | TGGGTTGGTCCGACTTTAAG+AGG | - | chr1.1:70657763-70657782 | None:intergenic | 50.0% |
| AACCCATGAGAGTTGCACCG+TGG | + | chr1.1:70657605-70657624 | MS.gene88895:CDS | 55.0% | |
| AGGCAGCAAATCAGCACTGC+AGG | - | chr1.1:70660200-70660219 | None:intergenic | 55.0% | |
| AGGCATGGTTGGACTTGGAG+GGG | + | chr1.1:70660409-70660428 | MS.gene88895:intron | 55.0% | |
| ATCTGACCCTCAACTCCAGC+TGG | + | chr1.1:70657654-70657673 | MS.gene88895:CDS | 55.0% | |
| CAAAGAATCGCCTTTCCCGC+GGG | + | chr1.1:70657683-70657702 | MS.gene88895:CDS | 55.0% | |
| CCAAGTCCAACCATGCCTCA+CGG | - | chr1.1:70660407-70660426 | None:intergenic | 55.0% | |
| GACCCAAAAGGAGTAGGCTC+AGG | - | chr1.1:70657570-70657589 | None:intergenic | 55.0% | |
| GAGCCGCTGAAGAGCTTCTT+AGG | - | chr1.1:70660056-70660075 | None:intergenic | 55.0% | |
| GAGGCATGGTTGGACTTGGA+GGG | + | chr1.1:70660408-70660427 | MS.gene88895:intron | 55.0% | |
| GCCGCTGAAGAGCTTCTTAG+GGG | - | chr1.1:70660054-70660073 | None:intergenic | 55.0% | |
| GCGACCAAAGCAGACAAAGG+AGG | - | chr1.1:70657713-70657732 | None:intergenic | 55.0% | |
| GCGGGAAAGGCGATTCTTTG+TGG | - | chr1.1:70657683-70657702 | None:intergenic | 55.0% | |
| GTGCAGTGGACAGATGCTTG+CGG | + | chr1.1:70657997-70658016 | MS.gene88895:CDS | 55.0% | |
| GTTCCACGGTGCAACTCTCA+TGG | - | chr1.1:70657611-70657630 | None:intergenic | 55.0% | |
| TGAAGCAAGGAGTGGCGCTT+CGG | + | chr1.1:70658670-70658689 | MS.gene88895:intron | 55.0% | |
| TGAGGCATGGTTGGACTTGG+AGG | + | chr1.1:70660407-70660426 | MS.gene88895:intron | 55.0% | |
| TGGAAGCCAGCTGGAGTTGA+GGG | - | chr1.1:70657663-70657682 | None:intergenic | 55.0% | |
| TGTCTAGTCCTGGTCCTGAG+AGG | + | chr1.1:70659690-70659709 | MS.gene88895:intron | 55.0% | |
| ! | GCTGACTAGCTGAGCAGGTT+TGG | + | chr1.1:70660481-70660500 | MS.gene88895:intron | 55.0% |
| ! | GGCCTGAGCCTACTCCTTTT+GGG | + | chr1.1:70657565-70657584 | MS.gene88895:CDS | 55.0% |
| ! | TTAGGGCTGACTAGCTGAGC+AGG | + | chr1.1:70660476-70660495 | MS.gene88895:intron | 55.0% |
| CAATTTGAGCCGTGGCCGTG+AGG | + | chr1.1:70660389-70660408 | MS.gene88895:intron | 60.0% | |
| CCGTGAGGCATGGTTGGACT+TGG | + | chr1.1:70660404-70660423 | MS.gene88895:intron | 60.0% | |
| GCTTTGGTCGCACTTCCGCA+GGG | + | chr1.1:70657722-70657741 | MS.gene88895:CDS | 60.0% | |
| GTGGAAGCCAGCTGGAGTTG+AGG | - | chr1.1:70657664-70657683 | None:intergenic | 60.0% | |
| TGCTTTGGTCGCACTTCCGC+AGG | + | chr1.1:70657721-70657740 | MS.gene88895:CDS | 60.0% | |
| ! | AGACAAAGGAGGCACACCCG+CGG | - | chr1.1:70657702-70657721 | None:intergenic | 60.0% |
| ! | GGGCCTGAGCCTACTCCTTT+TGG | + | chr1.1:70657564-70657583 | MS.gene88895:CDS | 60.0% |
| CCAACCATGCCTCACGGCCA+CGG | - | chr1.1:70660401-70660420 | None:intergenic | 65.0% | |
| ! | GACAAAGGAGGCACACCCGC+GGG | - | chr1.1:70657701-70657720 | None:intergenic | 65.0% |
| CCGTGGCCGTGAGGCATGGT+TGG | + | chr1.1:70660398-70660417 | MS.gene88895:intron | 70.0% | |
| TGAGCCGTGGCCGTGAGGCA+TGG | + | chr1.1:70660394-70660413 | MS.gene88895:intron | 70.0% | |
| ! | AGGAGGCACACCCGCGGGAA+AGG | - | chr1.1:70657696-70657715 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 70657505 | 70661063 | 70657505 | ID=MS.gene88895 |
| chr1.1 | mRNA | 70657505 | 70661063 | 70657505 | ID=MS.gene88895.t1;Parent=MS.gene88895 |
| chr1.1 | exon | 70657505 | 70658055 | 70657505 | ID=MS.gene88895.t1.exon1;Parent=MS.gene88895.t1 |
| chr1.1 | CDS | 70657505 | 70658055 | 70657505 | ID=cds.MS.gene88895.t1;Parent=MS.gene88895.t1 |
| chr1.1 | exon | 70658675 | 70658737 | 70658675 | ID=MS.gene88895.t1.exon2;Parent=MS.gene88895.t1 |
| chr1.1 | CDS | 70658675 | 70658737 | 70658675 | ID=cds.MS.gene88895.t1;Parent=MS.gene88895.t1 |
| chr1.1 | exon | 70660204 | 70660332 | 70660204 | ID=MS.gene88895.t1.exon3;Parent=MS.gene88895.t1 |
| chr1.1 | CDS | 70660204 | 70660332 | 70660204 | ID=cds.MS.gene88895.t1;Parent=MS.gene88895.t1 |
| chr1.1 | exon | 70660994 | 70661063 | 70660994 | ID=MS.gene88895.t1.exon4;Parent=MS.gene88895.t1 |
| chr1.1 | CDS | 70660994 | 70661063 | 70660994 | ID=cds.MS.gene88895.t1;Parent=MS.gene88895.t1 |
| Gene Sequence |
| Protein sequence |
