Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89322.t1 | XP_013448963.1 | 95 | 683 | 33 | 1 | 1 | 683 | 1 | 682 | 0.00E+00 | 1303.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89322.t1 | P0C7P8 | 28.5 | 751 | 432 | 23 | 5 | 676 | 4 | 728 | 2.1e-54 | 215.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89322.t1 | A0A072UAY4 | 95.0 | 683 | 33 | 1 | 1 | 683 | 1 | 682 | 0.0e+00 | 1303.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052579 | MS.gene89322 | 0.808505 | 3.00E-50 | -1.69E-46 |
| MS.gene055204 | MS.gene89322 | 0.962152 | 1.54E-120 | -1.69E-46 |
| MS.gene056299 | MS.gene89322 | 0.808221 | 3.45E-50 | -1.69E-46 |
| MS.gene057148 | MS.gene89322 | -0.807498 | 4.91E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89322.t1 | MTR_7g063470 | 95.022 | 683 | 33 | 1 | 1 | 683 | 1 | 682 | 0.0 | 1326 |
| MS.gene89322.t1 | MTR_7g063470 | 94.629 | 633 | 33 | 1 | 51 | 683 | 1 | 632 | 0.0 | 1215 |
| MS.gene89322.t1 | MTR_4g051565 | 35.783 | 313 | 175 | 8 | 385 | 676 | 499 | 806 | 2.17e-44 | 171 |
| MS.gene89322.t1 | MTR_4g051565 | 35.783 | 313 | 175 | 8 | 385 | 676 | 587 | 894 | 2.86e-44 | 171 |
| MS.gene89322.t1 | MTR_4g051565 | 29.630 | 189 | 107 | 5 | 6 | 181 | 5 | 180 | 1.26e-17 | 87.8 |
| MS.gene89322.t1 | MTR_2g087295 | 46.111 | 180 | 94 | 2 | 500 | 676 | 676 | 855 | 1.53e-43 | 169 |
| MS.gene89322.t1 | MTR_2g087295 | 27.442 | 215 | 131 | 8 | 6 | 208 | 5 | 206 | 6.74e-14 | 75.9 |
| MS.gene89322.t1 | MTR_7g096650 | 36.304 | 303 | 153 | 8 | 387 | 676 | 186 | 461 | 1.42e-40 | 155 |
| MS.gene89322.t1 | MTR_1g070180 | 45.213 | 188 | 94 | 4 | 498 | 676 | 472 | 659 | 2.49e-40 | 157 |
| MS.gene89322.t1 | MTR_1g070180 | 33.333 | 183 | 80 | 4 | 3 | 175 | 2 | 152 | 1.69e-23 | 106 |
| MS.gene89322.t1 | MTR_7g096650 | 36.304 | 303 | 153 | 8 | 387 | 676 | 362 | 637 | 8.12e-40 | 155 |
| MS.gene89322.t1 | MTR_7g096650 | 30.986 | 142 | 81 | 4 | 5 | 141 | 4 | 133 | 1.12e-13 | 74.7 |
| MS.gene89322.t1 | MTR_7g096650 | 36.304 | 303 | 153 | 8 | 387 | 676 | 382 | 657 | 8.63e-40 | 155 |
| MS.gene89322.t1 | MTR_7g096650 | 32.955 | 176 | 101 | 4 | 5 | 175 | 4 | 167 | 1.23e-16 | 84.3 |
| MS.gene89322.t1 | MTR_1g077640 | 41.011 | 178 | 95 | 3 | 508 | 676 | 573 | 749 | 6.99e-35 | 142 |
| MS.gene89322.t1 | MTR_1g018810 | 37.736 | 106 | 58 | 3 | 82 | 181 | 97 | 200 | 4.30e-14 | 74.3 |
| MS.gene89322.t1 | MTR_2g078750 | 29.379 | 177 | 110 | 5 | 5 | 175 | 19 | 186 | 1.18e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89322.t1 | AT2G27230 | 27.601 | 692 | 404 | 21 | 6 | 676 | 5 | 620 | 3.18e-58 | 208 |
| MS.gene89322.t1 | AT2G27230 | 27.601 | 692 | 404 | 21 | 6 | 676 | 5 | 620 | 3.18e-58 | 208 |
| MS.gene89322.t1 | AT2G31280 | 36.517 | 356 | 189 | 14 | 334 | 680 | 390 | 717 | 5.44e-45 | 172 |
| MS.gene89322.t1 | AT2G31280 | 35.795 | 176 | 72 | 5 | 8 | 175 | 7 | 149 | 3.91e-20 | 95.5 |
| MS.gene89322.t1 | AT2G31280 | 35.121 | 373 | 188 | 14 | 334 | 680 | 390 | 734 | 1.29e-43 | 168 |
| MS.gene89322.t1 | AT2G31280 | 35.795 | 176 | 72 | 5 | 8 | 175 | 7 | 149 | 4.01e-20 | 95.5 |
| MS.gene89322.t1 | AT1G06150 | 45.856 | 181 | 93 | 3 | 501 | 676 | 548 | 728 | 1.21e-40 | 159 |
| MS.gene89322.t1 | AT1G06150 | 36.257 | 171 | 91 | 4 | 5 | 175 | 4 | 156 | 4.31e-23 | 105 |
| MS.gene89322.t1 | AT1G06150 | 45.355 | 183 | 93 | 3 | 501 | 676 | 548 | 730 | 1.32e-40 | 159 |
| MS.gene89322.t1 | AT1G06150 | 36.257 | 171 | 91 | 4 | 5 | 175 | 4 | 156 | 4.40e-23 | 105 |
| MS.gene89322.t1 | AT1G64625 | 41.304 | 184 | 96 | 3 | 495 | 676 | 320 | 493 | 5.13e-38 | 148 |
| MS.gene89322.t1 | AT2G31280 | 34.551 | 356 | 174 | 14 | 334 | 658 | 362 | 689 | 5.65e-38 | 151 |
| MS.gene89322.t1 | AT2G31280 | 33.333 | 156 | 61 | 5 | 5 | 158 | 30 | 144 | 1.77e-12 | 71.2 |
| MS.gene89322.t1 | AT1G64625 | 33.096 | 281 | 154 | 6 | 398 | 676 | 269 | 517 | 6.13e-38 | 149 |
| MS.gene89322.t1 | AT1G64625 | 41.304 | 184 | 96 | 3 | 495 | 676 | 334 | 507 | 6.42e-38 | 148 |
| MS.gene89322.t1 | AT1G64625 | 46.154 | 78 | 42 | 0 | 495 | 572 | 334 | 411 | 3.54e-17 | 85.1 |
| MS.gene89322.t1 | AT3G15240 | 27.419 | 186 | 97 | 4 | 10 | 175 | 38 | 205 | 3.06e-11 | 66.2 |
Find 148 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCATCTTGAAAGGGATTT+TGG | 0.115506 | 7.1:+38245757 | MS.gene89322:CDS |
| TCATCTTTCAATGGCAATTC+AGG | 0.257213 | 7.1:+38244606 | MS.gene89322:CDS |
| ATTGAATTTCTCGTTGATAT+TGG | 0.272833 | 7.1:-38243713 | None:intergenic |
| TGTTCCCTCAATGGCTGAAT+TGG | 0.281284 | 7.1:+38244194 | MS.gene89322:CDS |
| GAAAACTTTGGTCCACTAAT+AGG | 0.282150 | 7.1:-38244678 | None:intergenic |
| CTCGAAGAATATACATCATC+TGG | 0.293603 | 7.1:-38242313 | None:intergenic |
| AACTCTATCGCATTATTTGA+TGG | 0.303118 | 7.1:+38243807 | MS.gene89322:CDS |
| ACAGCATCCAAGAGATATTC+TGG | 0.323266 | 7.1:-38244369 | None:intergenic |
| TCAAATGCGCAGCTTCTTCC+TGG | 0.324435 | 7.1:-38245265 | None:intergenic |
| GGTCCACTAATAGGCTTCAT+AGG | 0.331664 | 7.1:-38244669 | None:intergenic |
| TAAGTACATCATGTGCTTTA+CGG | 0.335446 | 7.1:-38244939 | None:intergenic |
| ATTCAATTTCATTCATCGTT+TGG | 0.351030 | 7.1:+38243729 | MS.gene89322:CDS |
| CAGAAAAGTAATCAGCCTTT+GGG | 0.356079 | 7.1:+38242259 | MS.gene89322:CDS |
| TGGCTTCTTCAATTTGCATC+TGG | 0.357988 | 7.1:+38242789 | MS.gene89322:CDS |
| ATTTGACACTAGTTTAATTC+CGG | 0.359120 | 7.1:+38242654 | MS.gene89322:CDS |
| AGAGAAGGAACTGATGATTC+AGG | 0.361342 | 7.1:+38242334 | MS.gene89322:CDS |
| TCTTCATCTGAGATATATTT+CGG | 0.368517 | 7.1:-38244264 | None:intergenic |
| TCATTTGAGACAAAACATAT+TGG | 0.369387 | 7.1:+38243973 | MS.gene89322:CDS |
| GTCTCGTCGCAAATACAGTT+TGG | 0.371269 | 7.1:+38242390 | MS.gene89322:CDS |
| CCAGAAAAGTAATCAGCCTT+TGG | 0.374968 | 7.1:+38242258 | MS.gene89322:CDS |
| CTTTCTTCAGAATTGATTTG+TGG | 0.382325 | 7.1:-38244492 | None:intergenic |
| GCCTATAGTCATAGAAGATC+TGG | 0.383505 | 7.1:+38245309 | MS.gene89322:CDS |
| CTTCTCCATTGTTCCCTCAA+TGG | 0.383886 | 7.1:+38244185 | MS.gene89322:CDS |
| CATTGAAAGATGATAGAAAC+TGG | 0.394401 | 7.1:-38244596 | None:intergenic |
| TTCAATTACACAATTGTTGA+AGG | 0.394878 | 7.1:+38241541 | MS.gene89322:CDS |
| GTCGACAATGATGGACAGTT+TGG | 0.395511 | 7.1:+38244054 | MS.gene89322:CDS |
| TATTCTGGATGAATTCCTTC+AGG | 0.401336 | 7.1:-38244354 | None:intergenic |
| CATGTAGATCCAACAGTGTT+AGG | 0.402173 | 7.1:+38244427 | MS.gene89322:CDS |
| CGTTGATGTATTTATATTGA+AGG | 0.413499 | 7.1:-38243863 | None:intergenic |
| TGATATTGGTAATAAATTCC+AGG | 0.413573 | 7.1:-38243699 | None:intergenic |
| AATGGCACTATGCTGTCTTT+TGG | 0.418476 | 7.1:+38241582 | MS.gene89322:CDS |
| TGGGAACTGATTCTCAAGAT+TGG | 0.424555 | 7.1:+38243776 | MS.gene89322:CDS |
| TAATTGTACACCATTGAACT+TGG | 0.425108 | 7.1:+38243756 | MS.gene89322:CDS |
| ATCACTTGGTAGAAGAGATA+TGG | 0.429697 | 7.1:+38244016 | MS.gene89322:CDS |
| TGATGAGGCGCCACAGGAAA+AGG | 0.435741 | 7.1:+38244638 | MS.gene89322:CDS |
| TGATCTTATGCCTGAGCTTA+CGG | 0.436796 | 7.1:+38244548 | MS.gene89322:CDS |
| AACGATGAAACAAGCCCAAC+TGG | 0.441214 | 7.1:-38245795 | None:intergenic |
| TTCCCCATGGCCGTAAGCTC+AGG | 0.441807 | 7.1:-38244558 | None:intergenic |
| TACCATTCTTTCAGGGCTGT+TGG | 0.445234 | 7.1:+38242571 | MS.gene89322:intron |
| CTTAAGAATGGTAACAAGTC+AGG | 0.449470 | 7.1:+38244958 | MS.gene89322:CDS |
| AAAATAGATGGCAGCCATCC+AGG | 0.450256 | 7.1:+38245247 | MS.gene89322:CDS |
| ATACTTACCCTTCCACCATC+GGG | 0.451103 | 7.1:-38244804 | None:intergenic |
| TGCTCAAGTGATCCGAAGGC+TGG | 0.453930 | 7.1:+38245730 | MS.gene89322:CDS |
| CGCAAATACAGTTTGGGAGA+AGG | 0.454810 | 7.1:+38242397 | MS.gene89322:CDS |
| TCCAGATCTTCTATGACTAT+AGG | 0.457765 | 7.1:-38245310 | None:intergenic |
| CAGTTTCTATCATCTTTCAA+TGG | 0.458798 | 7.1:+38244597 | MS.gene89322:CDS |
| ATCAGCCTTTGGGGAGTATG+TGG | 0.460271 | 7.1:+38242269 | MS.gene89322:CDS |
| AGGAAAAGGCAGAAAATAGA+TGG | 0.461681 | 7.1:+38245235 | MS.gene89322:CDS |
| AATCCTATGAAGCCTATTAG+TGG | 0.461782 | 7.1:+38244666 | MS.gene89322:CDS |
| AAGAAGCTGCGCATTTGACT+TGG | 0.466646 | 7.1:+38245270 | MS.gene89322:CDS |
| TCTCGTCGCAAATACAGTTT+GGG | 0.467945 | 7.1:+38242391 | MS.gene89322:CDS |
| TCAGCCTTTGGGGAGTATGT+GGG | 0.473397 | 7.1:+38242270 | MS.gene89322:CDS |
| GACAAAACATATTGGTTATG+TGG | 0.475296 | 7.1:+38243981 | MS.gene89322:CDS |
| ATGATCAATTGTCTATCTCT+TGG | 0.477190 | 7.1:-38244750 | None:intergenic |
| TGGATAGGATGAAGGAGTTG+AGG | 0.477225 | 7.1:+38244772 | MS.gene89322:CDS |
| GGGTCAGCTTTCTATGAGAC+AGG | 0.477956 | 7.1:-38245981 | None:intergenic |
| ATAGAAGATCTGGAATCCTC+AGG | 0.479558 | 7.1:+38245319 | MS.gene89322:CDS |
| GAATCAGTTCCCAAGTTCAA+TGG | 0.480600 | 7.1:-38243766 | None:intergenic |
| TACAGGTACCTGAAAGGAAA+AGG | 0.483460 | 7.1:+38245221 | MS.gene89322:intron |
| AAAACTCCTTGTGGAAGAAC+AGG | 0.485224 | 7.1:-38243196 | None:intergenic |
| ACTTGGAAAGTGAACTATCA+TGG | 0.488551 | 7.1:+38245287 | MS.gene89322:CDS |
| GTTGATTGATGAGGCGCCAC+AGG | 0.490522 | 7.1:+38244632 | MS.gene89322:CDS |
| TCAATTTGCATCTGGCATCA+AGG | 0.490960 | 7.1:+38242797 | MS.gene89322:CDS |
| ATGCCTGAGCTTACGGCCAT+GGG | 0.493465 | 7.1:+38244555 | MS.gene89322:CDS |
| TTCCAAAATCCCTTTCAAGA+TGG | 0.494487 | 7.1:-38245759 | None:intergenic |
| ATTATGACCGAGCAACTACT+TGG | 0.495159 | 7.1:+38244114 | MS.gene89322:CDS |
| GACAACTCATAGTCATCCTT+AGG | 0.495626 | 7.1:-38243892 | None:intergenic |
| TATGCCTGAGCTTACGGCCA+TGG | 0.499536 | 7.1:+38244554 | MS.gene89322:CDS |
| AGATGGTAATGTCCAGCCTT+CGG | 0.502070 | 7.1:-38245742 | None:intergenic |
| GGATAGGATGAAGGAGTTGA+GGG | 0.503131 | 7.1:+38244773 | MS.gene89322:CDS |
| AGCTGCAAAAGATGCAGTAA+AGG | 0.507015 | 7.1:-38245948 | None:intergenic |
| TCAATTACACAATTGTTGAA+GGG | 0.509569 | 7.1:+38241542 | MS.gene89322:CDS |
| AATTGAAGAAGCCACTCATC+CGG | 0.511721 | 7.1:-38242780 | None:intergenic |
| CAGCCTTTGGGGAGTATGTG+GGG | 0.512227 | 7.1:+38242271 | MS.gene89322:CDS |
| AAACCGTTCGAGTACCAGTT+GGG | 0.512289 | 7.1:+38245781 | MS.gene89322:CDS |
| AATTCATCCAGAATATCTCT+TGG | 0.512402 | 7.1:+38244362 | MS.gene89322:CDS |
| GCACATGATGTACTTAAGAA+TGG | 0.515234 | 7.1:+38244946 | MS.gene89322:CDS |
| CTGGACATTACCATCTTGAA+AGG | 0.517528 | 7.1:+38245749 | MS.gene89322:CDS |
| AACTTATCCCCGATGGTGGA+AGG | 0.519781 | 7.1:+38244796 | MS.gene89322:CDS |
| GATTTGTGGCTGAACGGAGC+CGG | 0.520965 | 7.1:-38244478 | None:intergenic |
| ACCGCCTCCAAGTAGTTGCT+CGG | 0.521574 | 7.1:-38244121 | None:intergenic |
| TCCTCCAGTGTCCGGATGAG+TGG | 0.523699 | 7.1:+38242769 | MS.gene89322:intron |
| GCAAATACAGTTTGGGAGAA+GGG | 0.529080 | 7.1:+38242398 | MS.gene89322:CDS |
| AAGAGATAGACAATTGATCA+TGG | 0.530468 | 7.1:+38244752 | MS.gene89322:CDS |
| TATCTCTTGGATGCTGTTGT+CGG | 0.530560 | 7.1:+38244375 | MS.gene89322:CDS |
| TATATGAGACCTAACACTGT+TGG | 0.533358 | 7.1:-38244436 | None:intergenic |
| TCTCACTTTGTCGACAATGA+TGG | 0.534394 | 7.1:+38244045 | MS.gene89322:CDS |
| TTGTTCGCGCTAGAAAACTT+TGG | 0.535137 | 7.1:-38244690 | None:intergenic |
| ATTGATCATGGATAGGATGA+AGG | 0.536115 | 7.1:+38244764 | MS.gene89322:CDS |
| TCCGTTGCATATAGACAGAC+AGG | 0.539556 | 7.1:+38244231 | MS.gene89322:CDS |
| AATACTTACCCTTCCACCAT+CGG | 0.539762 | 7.1:-38244805 | None:intergenic |
| GCTGAATTGGACAAAGCGAT+TGG | 0.541666 | 7.1:+38244207 | MS.gene89322:CDS |
| GATGTATATTCTTCGAGAGA+AGG | 0.545343 | 7.1:+38242319 | MS.gene89322:CDS |
| GCAATTTGCTTCATTTAACT+CGG | 0.547795 | 7.1:+38243219 | MS.gene89322:CDS |
| TTCAGGCTTGTTGATTGATG+AGG | 0.547800 | 7.1:+38244623 | MS.gene89322:CDS |
| GTGTAGCATTGATAACCTCT+TGG | 0.550518 | 7.1:+38244910 | MS.gene89322:intron |
| CAGTTTGGAGACACGTCGAA+TGG | 0.551121 | 7.1:+38244069 | MS.gene89322:CDS |
| ATAATAGGTTGCTGAAGACC+TGG | 0.551304 | 7.1:+38243681 | MS.gene89322:intron |
| CTCAGGGAACATGCTCATAG+AGG | 0.551708 | 7.1:+38245336 | MS.gene89322:CDS |
| ACCAGTGAAAATATCCTCAC+AGG | 0.552567 | 7.1:-38242629 | None:intergenic |
| TGAAAATTCATCGTTCCCCA+TGG | 0.553208 | 7.1:-38244571 | None:intergenic |
| AAAGAACTTACATTGGAGAA+AGG | 0.554540 | 7.1:-38241616 | None:intergenic |
| TGGACATTACCATCTTGAAA+GGG | 0.555810 | 7.1:+38245750 | MS.gene89322:CDS |
| CTGGTACCTGTTCTTCCACA+AGG | 0.556911 | 7.1:+38243190 | MS.gene89322:CDS |
| TTGTCCAATTCAGCCATTGA+GGG | 0.558959 | 7.1:-38244198 | None:intergenic |
| ATGCGCAGCTTCTTCCTGGA+TGG | 0.560508 | 7.1:-38245261 | None:intergenic |
| TCGAAGAATATACATCATCT+GGG | 0.561592 | 7.1:-38242312 | None:intergenic |
| TTTGTCCAATTCAGCCATTG+AGG | 0.562528 | 7.1:-38244199 | None:intergenic |
| GCCTGTCTGTCTATATGCAA+CGG | 0.563319 | 7.1:-38244232 | None:intergenic |
| ATAGACAATTGATCATGGAT+AGG | 0.567082 | 7.1:+38244757 | MS.gene89322:CDS |
| AGAATTGATTTGTGGCTGAA+CGG | 0.572108 | 7.1:-38244484 | None:intergenic |
| TTGGGCTTGTTTCATCGTTG+AGG | 0.572928 | 7.1:+38245799 | MS.gene89322:CDS |
| TACATCAACGAGATTTCCTA+AGG | 0.576078 | 7.1:+38243876 | MS.gene89322:CDS |
| TTCAGCCATTGAGGGAACAA+TGG | 0.578242 | 7.1:-38244190 | None:intergenic |
| AAGAGCAAATGAAAATGAGA+TGG | 0.587644 | 7.1:+38243942 | MS.gene89322:CDS |
| TCCATCCTGTGAAAACCTCT+AGG | 0.589748 | 7.1:-38245915 | None:intergenic |
| ATGACCGAGCAACTACTTGG+AGG | 0.590156 | 7.1:+38244117 | MS.gene89322:CDS |
| ACAATGCCATCAGAGTTTAC+CGG | 0.593338 | 7.1:+38244459 | MS.gene89322:CDS |
| ACGGAGCCGGTAAACTCTGA+TGG | 0.594101 | 7.1:-38244465 | None:intergenic |
| TGGATTTACAGGTACCTGAA+AGG | 0.594367 | 7.1:+38245215 | MS.gene89322:intron |
| AATTGTACACCATTGAACTT+GGG | 0.602071 | 7.1:+38243757 | MS.gene89322:CDS |
| TAGAAGATCTGGAATCCTCA+GGG | 0.603059 | 7.1:+38245320 | MS.gene89322:CDS |
| AAAAGTTTCGAGATTCCTGA+AGG | 0.603246 | 7.1:+38244339 | MS.gene89322:CDS |
| GCAAATTGCAAAACTCCTTG+TGG | 0.603269 | 7.1:-38243205 | None:intergenic |
| AGCCTTTGGGGAGTATGTGG+GGG | 0.607518 | 7.1:+38242272 | MS.gene89322:CDS |
| AAAACCGTTCGAGTACCAGT+TGG | 0.607874 | 7.1:+38245780 | MS.gene89322:CDS |
| AGGGAACTTATCCCCGATGG+TGG | 0.613042 | 7.1:+38244792 | MS.gene89322:CDS |
| CAGATGGTATGCAATGAGCA+TGG | 0.615053 | 7.1:+38245692 | MS.gene89322:intron |
| ACTTATCCCCGATGGTGGAA+GGG | 0.623871 | 7.1:+38244797 | MS.gene89322:CDS |
| TTGAGGGAACTTATCCCCGA+TGG | 0.624711 | 7.1:+38244789 | MS.gene89322:CDS |
| GGAGACAAAATCAAATCACT+TGG | 0.627377 | 7.1:+38244002 | MS.gene89322:CDS |
| ACCGAGCAACTACTTGGAGG+CGG | 0.630724 | 7.1:+38244120 | MS.gene89322:CDS |
| TGACACTAGTTTAATTCCGG+AGG | 0.634228 | 7.1:+38242657 | MS.gene89322:CDS |
| AGATTGCTCAAGTGATCCGA+AGG | 0.635542 | 7.1:+38245726 | MS.gene89322:CDS |
| TGACATGCACAGGTTCCTAG+AGG | 0.640850 | 7.1:+38245900 | MS.gene89322:intron |
| TCTACATGAAGTTTCGTCAG+AGG | 0.642228 | 7.1:-38244412 | None:intergenic |
| AAGCCCAACTGGTACTCGAA+CGG | 0.642948 | 7.1:-38245784 | None:intergenic |
| CTCTATGAGCATGTTCCCTG+AGG | 0.646774 | 7.1:-38245335 | None:intergenic |
| GCCTTTGGGGAGTATGTGGG+GGG | 0.650953 | 7.1:+38242273 | MS.gene89322:CDS |
| TGGCAAATTAGCTCTTGCCA+AGG | 0.654781 | 7.1:+38242591 | MS.gene89322:CDS |
| TTGTCGACAAAGTGAGACCA+TGG | 0.655875 | 7.1:-38244039 | None:intergenic |
| GAAACGATTTGCTGATCGTG+AGG | 0.656486 | 7.1:+38244991 | MS.gene89322:CDS |
| GCTTTACGGTTCGTTCCAAG+AGG | 0.657976 | 7.1:-38244925 | None:intergenic |
| TGGTAGAAGAGATATGGCCA+TGG | 0.663999 | 7.1:+38244022 | MS.gene89322:CDS |
| CGAAGAATATACATCATCTG+GGG | 0.676864 | 7.1:-38242311 | None:intergenic |
| TGCCTGAGCTTACGGCCATG+GGG | 0.687920 | 7.1:+38244556 | MS.gene89322:CDS |
| TACTTACCCTTCCACCATCG+GGG | 0.699528 | 7.1:-38244803 | None:intergenic |
| AGAAAAGTAATCAGCCTTTG+GGG | 0.712981 | 7.1:+38242260 | MS.gene89322:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTATCAAAATAAATAGAAA+TGG | - | chr7.1:38242859-38242878 | None:intergenic | 15.0% |
| !! | TTCATATTACATGATATAAT+AGG | + | chr7.1:38243666-38243685 | MS.gene89322:intron | 15.0% |
| !! | AACAAAAAAAGAGAAAAAGT+AGG | + | chr7.1:38244708-38244727 | MS.gene89322:CDS | 20.0% |
| !! | AATAATCAAATTACATGCAT+CGG | - | chr7.1:38242133-38242152 | None:intergenic | 20.0% |
| !! | ATTTAGTATATTTCAAAGCA+GGG | - | chr7.1:38242737-38242756 | None:intergenic | 20.0% |
| !! | TAACATACTAAACATGATAA+TGG | - | chr7.1:38242078-38242097 | None:intergenic | 20.0% |
| !! | TAGGTAATAAGAAAAATTCA+AGG | + | chr7.1:38244727-38244746 | MS.gene89322:CDS | 20.0% |
| !! | TATTTAGTATATTTCAAAGC+AGG | - | chr7.1:38242738-38242757 | None:intergenic | 20.0% |
| !! | TTAAAATGGTAAATTCTACT+CGG | - | chr7.1:38241875-38241894 | None:intergenic | 20.0% |
| !! | TTTATCACTTATGTGTATTA+TGG | + | chr7.1:38242509-38242528 | MS.gene89322:intron | 20.0% |
| !! | TTTGTGAAAAATTCAAATGT+TGG | + | chr7.1:38244522-38244541 | MS.gene89322:CDS | 20.0% |
| !!! | AAAATGTAAACGAAGTTTTA+AGG | - | chr7.1:38242006-38242025 | None:intergenic | 20.0% |
| !!! | AACAATTTCGAAAGTATAAA+AGG | - | chr7.1:38244866-38244885 | None:intergenic | 20.0% |
| !!! | ACAATTTCGAAAGTATAAAA+GGG | - | chr7.1:38244865-38244884 | None:intergenic | 20.0% |
| !!! | AGAATTTACCATTTTAACTA+TGG | + | chr7.1:38241878-38241897 | MS.gene89322:intron | 20.0% |
| !!! | ATTTGAATTTTTCACAAATG+CGG | - | chr7.1:38244520-38244539 | None:intergenic | 20.0% |
| !!! | TTATATTAGATTCTAGCTTA+TGG | - | chr7.1:38245121-38245140 | None:intergenic | 20.0% |
| !!! | TTTATATTTTCATTATGAGC+TGG | + | chr7.1:38243255-38243274 | MS.gene89322:intron | 20.0% |
| ! | AAATTCAAATCTAGACTATG+TGG | - | chr7.1:38242705-38242724 | None:intergenic | 25.0% |
| ! | ATAATCAAATTACATGCATC+GGG | - | chr7.1:38242132-38242151 | None:intergenic | 25.0% |
| ! | ATGGAAATTGGTATGTAATT+TGG | - | chr7.1:38243043-38243062 | None:intergenic | 25.0% |
| ! | ATGTGTTGTATGAAATTTGT+TGG | + | chr7.1:38242162-38242181 | MS.gene89322:intron | 25.0% |
| ! | ATTCAATTTCATTCATCGTT+TGG | + | chr7.1:38243729-38243748 | MS.gene89322:CDS | 25.0% |
| ! | ATTGAATTTCTCGTTGATAT+TGG | - | chr7.1:38243716-38243735 | None:intergenic | 25.0% |
| ! | CAAATTGAAGGTAATATGTA+AGG | - | chr7.1:38243358-38243377 | None:intergenic | 25.0% |
| ! | CGTTGATGTATTTATATTGA+AGG | - | chr7.1:38243866-38243885 | None:intergenic | 25.0% |
| ! | CTTACATATTACCTTCAATT+TGG | + | chr7.1:38243356-38243375 | MS.gene89322:intron | 25.0% |
| ! | TCAATTACACAATTGTTGAA+GGG | + | chr7.1:38241542-38241561 | MS.gene89322:CDS | 25.0% |
| ! | TTCAATTACACAATTGTTGA+AGG | + | chr7.1:38241541-38241560 | MS.gene89322:CDS | 25.0% |
| !! | AATATTTCTGCAAATTACGA+AGG | + | chr7.1:38243116-38243135 | MS.gene89322:intron | 25.0% |
| !! | ATATTTCTGCAAATTACGAA+GGG | + | chr7.1:38243117-38243136 | MS.gene89322:intron | 25.0% |
| !! | ATTTGACACTAGTTTAATTC+CGG | + | chr7.1:38242654-38242673 | MS.gene89322:CDS | 25.0% |
| !! | ATTTTCATTTGCTCTTTTGA+GGG | - | chr7.1:38243938-38243957 | None:intergenic | 25.0% |
| !! | GATTTCTTCCTTATAGTTTT+CGG | + | chr7.1:38243381-38243400 | MS.gene89322:intron | 25.0% |
| !! | TCATTTGAGACAAAACATAT+TGG | + | chr7.1:38243973-38243992 | MS.gene89322:CDS | 25.0% |
| !! | TCTTCATCTGAGATATATTT+CGG | - | chr7.1:38244267-38244286 | None:intergenic | 25.0% |
| !! | TGATATTGGTAATAAATTCC+AGG | - | chr7.1:38243702-38243721 | None:intergenic | 25.0% |
| !! | TTACGAAAACTAAAGTGTTT+CGG | + | chr7.1:38244837-38244856 | MS.gene89322:intron | 25.0% |
| !!! | ACTCAACATTTTTTTACAGA+TGG | + | chr7.1:38245676-38245695 | MS.gene89322:intron | 25.0% |
| !!! | CATTGCAGATCTTTTAAAAA+GGG | + | chr7.1:38241927-38241946 | MS.gene89322:intron | 25.0% |
| !!! | TACATTTTTTCTGCTTTTGT+TGG | + | chr7.1:38242018-38242037 | MS.gene89322:intron | 25.0% |
| !!! | TCATTGCAGATCTTTTAAAA+AGG | + | chr7.1:38241926-38241945 | MS.gene89322:intron | 25.0% |
| !!! | TCGGAACATCATTAATTTTT+TGG | - | chr7.1:38241856-38241875 | None:intergenic | 25.0% |
| AAAGAACTTACATTGGAGAA+AGG | - | chr7.1:38241619-38241638 | None:intergenic | 30.0% | |
| AACTCATATATATACCGTCA+GGG | - | chr7.1:38243016-38243035 | None:intergenic | 30.0% | |
| AACTCTATCGCATTATTTGA+TGG | + | chr7.1:38243807-38243826 | MS.gene89322:CDS | 30.0% | |
| AAGAGATAGACAATTGATCA+TGG | + | chr7.1:38244752-38244771 | MS.gene89322:CDS | 30.0% | |
| AAGAGCAAATGAAAATGAGA+TGG | + | chr7.1:38243942-38243961 | MS.gene89322:CDS | 30.0% | |
| AATGGACAAAGAACTTACAT+TGG | - | chr7.1:38241626-38241645 | None:intergenic | 30.0% | |
| AATTCATCCAGAATATCTCT+TGG | + | chr7.1:38244362-38244381 | MS.gene89322:CDS | 30.0% | |
| AATTGTACACCATTGAACTT+GGG | + | chr7.1:38243757-38243776 | MS.gene89322:CDS | 30.0% | |
| ATAGACAATTGATCATGGAT+AGG | + | chr7.1:38244757-38244776 | MS.gene89322:CDS | 30.0% | |
| ATGATCAATTGTCTATCTCT+TGG | - | chr7.1:38244753-38244772 | None:intergenic | 30.0% | |
| ATGCTACACTGTATATCAAT+AGG | - | chr7.1:38244899-38244918 | None:intergenic | 30.0% | |
| ATGTTTGAACTTGGATTTAC+AGG | + | chr7.1:38245204-38245223 | MS.gene89322:intron | 30.0% | |
| CAGTTTCTATCATCTTTCAA+TGG | + | chr7.1:38244597-38244616 | MS.gene89322:CDS | 30.0% | |
| CATTGAAAGATGATAGAAAC+TGG | - | chr7.1:38244599-38244618 | None:intergenic | 30.0% | |
| GAAGAAATCAACCAAATTGA+AGG | - | chr7.1:38243370-38243389 | None:intergenic | 30.0% | |
| GTTACGTTTATGTTTGAACT+TGG | + | chr7.1:38245195-38245214 | MS.gene89322:intron | 30.0% | |
| TAACTCATATATATACCGTC+AGG | - | chr7.1:38243017-38243036 | None:intergenic | 30.0% | |
| TAAGTACATCATGTGCTTTA+CGG | - | chr7.1:38244942-38244961 | None:intergenic | 30.0% | |
| TAATCAAATTACATGCATCG+GGG | - | chr7.1:38242131-38242150 | None:intergenic | 30.0% | |
| TAATTGTACACCATTGAACT+TGG | + | chr7.1:38243756-38243775 | MS.gene89322:CDS | 30.0% | |
| TACACAAGCCATAGTTAAAA+TGG | - | chr7.1:38241889-38241908 | None:intergenic | 30.0% | |
| TAGAAACAGAAGCAAATCAA+TGG | - | chr7.1:38241644-38241663 | None:intergenic | 30.0% | |
| TAGTTACGTTAAAAGTCACA+CGG | + | chr7.1:38242942-38242961 | MS.gene89322:intron | 30.0% | |
| TATAATCTAAAGACACGAGA+AGG | + | chr7.1:38245136-38245155 | MS.gene89322:intron | 30.0% | |
| TCGAAGAATATACATCATCT+GGG | - | chr7.1:38242315-38242334 | None:intergenic | 30.0% | |
| TCTTTGTTACCATTCTTTCA+GGG | + | chr7.1:38242564-38242583 | MS.gene89322:intron | 30.0% | |
| TGTAGTAAAAGAGAAAAGCT+AGG | - | chr7.1:38245601-38245620 | None:intergenic | 30.0% | |
| TTTCAGTCAGAATTCAAACT+CGG | - | chr7.1:38241750-38241769 | None:intergenic | 30.0% | |
| ! | AGCTTTTCTCTTTTACTACA+TGG | + | chr7.1:38245601-38245620 | MS.gene89322:intron | 30.0% |
| ! | ATGTTTTGTCTCAAATGATG+AGG | - | chr7.1:38243971-38243990 | None:intergenic | 30.0% |
| ! | CATTTTCATTTGCTCTTTTG+AGG | - | chr7.1:38243939-38243958 | None:intergenic | 30.0% |
| ! | GACAAAACATATTGGTTATG+TGG | + | chr7.1:38243981-38244000 | MS.gene89322:CDS | 30.0% |
| ! | GCAATTTGCTTCATTTAACT+CGG | + | chr7.1:38243219-38243238 | MS.gene89322:CDS | 30.0% |
| !! | AACACATGTCTGTTTGTTTT+AGG | + | chr7.1:38242212-38242231 | MS.gene89322:intron | 30.0% |
| !! | AATTTTTCAGACTATTCTGC+TGG | + | chr7.1:38243171-38243190 | MS.gene89322:intron | 30.0% |
| !! | AGATCTTTACTTGTTGTAGA+AGG | - | chr7.1:38242831-38242850 | None:intergenic | 30.0% |
| !! | CTTTCTTCAGAATTGATTTG+TGG | - | chr7.1:38244495-38244514 | None:intergenic | 30.0% |
| !! | GGCTCTTTGAAATACAAAAA+AGG | - | chr7.1:38243489-38243508 | None:intergenic | 30.0% |
| !!! | ATTTTTTCTTTGACATGCAC+AGG | + | chr7.1:38245890-38245909 | MS.gene89322:intron | 30.0% |
| !!! | CTTTTAAAGTCACACATGAT+CGG | - | chr7.1:38242922-38242941 | None:intergenic | 30.0% |
| !!! | TTTTTTTTGTGTTAACCCTC+CGG | - | chr7.1:38245490-38245509 | None:intergenic | 30.0% |
| AAAAGTTTCGAGATTCCTGA+AGG | + | chr7.1:38244339-38244358 | MS.gene89322:CDS | 35.0% | |
| AAGTCTTTCTTTCTGTGGAA+TGG | - | chr7.1:38245405-38245424 | None:intergenic | 35.0% | |
| AATCAAATTACATGCATCGG+GGG | - | chr7.1:38242130-38242149 | None:intergenic | 35.0% | |
| AATCCTATGAAGCCTATTAG+TGG | + | chr7.1:38244666-38244685 | MS.gene89322:CDS | 35.0% | |
| AATGTATAGAATCTCACCTC+CGG | - | chr7.1:38242676-38242695 | None:intergenic | 35.0% | |
| ACTTGGAAAGTGAACTATCA+TGG | + | chr7.1:38245287-38245306 | MS.gene89322:CDS | 35.0% | |
| AGAAAAGTAATCAGCCTTTG+GGG | + | chr7.1:38242260-38242279 | MS.gene89322:CDS | 35.0% | |
| AGGAAAAGGCAGAAAATAGA+TGG | + | chr7.1:38245235-38245254 | MS.gene89322:CDS | 35.0% | |
| ATCACTTGGTAGAAGAGATA+TGG | + | chr7.1:38244016-38244035 | MS.gene89322:CDS | 35.0% | |
| ATGTCCAATAAAAAGCAGCA+TGG | + | chr7.1:38244309-38244328 | MS.gene89322:CDS | 35.0% | |
| ATTCTGACTGAAACAATCCT+TGG | + | chr7.1:38241757-38241776 | MS.gene89322:intron | 35.0% | |
| ATTGATCATGGATAGGATGA+AGG | + | chr7.1:38244764-38244783 | MS.gene89322:CDS | 35.0% | |
| CACTTGGTAAACATGGAAAT+TGG | - | chr7.1:38243055-38243074 | None:intergenic | 35.0% | |
| CAGAAAAGTAATCAGCCTTT+GGG | + | chr7.1:38242259-38242278 | MS.gene89322:CDS | 35.0% | |
| CGAAGAATATACATCATCTG+GGG | - | chr7.1:38242314-38242333 | None:intergenic | 35.0% | |
| CTCGAAGAATATACATCATC+TGG | - | chr7.1:38242316-38242335 | None:intergenic | 35.0% | |
| CTCTTTGTTACCATTCTTTC+AGG | + | chr7.1:38242563-38242582 | MS.gene89322:intron | 35.0% | |
| CTTAAGAATGGTAACAAGTC+AGG | + | chr7.1:38244958-38244977 | MS.gene89322:CDS | 35.0% | |
| GAAAACTTTGGTCCACTAAT+AGG | - | chr7.1:38244681-38244700 | None:intergenic | 35.0% | |
| GATGTATATTCTTCGAGAGA+AGG | + | chr7.1:38242319-38242338 | MS.gene89322:CDS | 35.0% | |
| GCACATGATGTACTTAAGAA+TGG | + | chr7.1:38244946-38244965 | MS.gene89322:CDS | 35.0% | |
| GGAGACAAAATCAAATCACT+TGG | + | chr7.1:38244002-38244021 | MS.gene89322:CDS | 35.0% | |
| GGTCGGATAATAAAAGATTG+CGG | - | chr7.1:38243589-38243608 | None:intergenic | 35.0% | |
| GTAAACAATCTTTACCCTGA+CGG | + | chr7.1:38242999-38243018 | MS.gene89322:intron | 35.0% | |
| GTCGGATAATAAAAGATTGC+GGG | - | chr7.1:38243588-38243607 | None:intergenic | 35.0% | |
| GTGACATCATTAAGATCGAA+TGG | + | chr7.1:38241713-38241732 | MS.gene89322:intron | 35.0% | |
| TACATCAACGAGATTTCCTA+AGG | + | chr7.1:38243876-38243895 | MS.gene89322:CDS | 35.0% | |
| TAGTATATTTCAAAGCAGGG+TGG | - | chr7.1:38242734-38242753 | None:intergenic | 35.0% | |
| TATATGAGACCTAACACTGT+TGG | - | chr7.1:38244439-38244458 | None:intergenic | 35.0% | |
| TATTCTGGATGAATTCCTTC+AGG | - | chr7.1:38244357-38244376 | None:intergenic | 35.0% | |
| TCATCTTTCAATGGCAATTC+AGG | + | chr7.1:38244606-38244625 | MS.gene89322:CDS | 35.0% | |
| TCCAGATCTTCTATGACTAT+AGG | - | chr7.1:38245313-38245332 | None:intergenic | 35.0% | |
| TCGGATAATAAAAGATTGCG+GGG | - | chr7.1:38243587-38243606 | None:intergenic | 35.0% | |
| TGGACATTACCATCTTGAAA+GGG | + | chr7.1:38245750-38245769 | MS.gene89322:CDS | 35.0% | |
| TTCACAAGTCTTTCTTTCTG+TGG | - | chr7.1:38245410-38245429 | None:intergenic | 35.0% | |
| TTCCAAAATCCCTTTCAAGA+TGG | - | chr7.1:38245762-38245781 | None:intergenic | 35.0% | |
| TTGTAAGCTCAACTGAGATT+AGG | + | chr7.1:38243081-38243100 | MS.gene89322:intron | 35.0% | |
| TTGTATTTCAAAGAGCCTTG+CGG | + | chr7.1:38243492-38243511 | MS.gene89322:intron | 35.0% | |
| ! | ATTTTCTGCCTTTTCCTTTC+AGG | - | chr7.1:38245232-38245251 | None:intergenic | 35.0% |
| ! | GCTTTTGTGATACTATGCAA+TGG | + | chr7.1:38241564-38241583 | MS.gene89322:CDS | 35.0% |
| ! | GGATTATTAACCTTTTCCTG+TGG | - | chr7.1:38244651-38244670 | None:intergenic | 35.0% |
| ! | GGTATTGAAGAGGTCTATTA+TGG | - | chr7.1:38245562-38245581 | None:intergenic | 35.0% |
| ! | TACCATCTTGAAAGGGATTT+TGG | + | chr7.1:38245757-38245776 | MS.gene89322:CDS | 35.0% |
| ! | TCTTGCCAAGGAACATTTTT+GGG | + | chr7.1:38242603-38242622 | MS.gene89322:CDS | 35.0% |
| ! | TTTTCGCACCGAAAACTATA+AGG | - | chr7.1:38243392-38243411 | None:intergenic | 35.0% |
| !! | AGAATTGATTTGTGGCTGAA+CGG | - | chr7.1:38244487-38244506 | None:intergenic | 35.0% |
| !! | ATAGTTTTCGGTGCGAAAAT+TGG | + | chr7.1:38243393-38243412 | MS.gene89322:intron | 35.0% |
| !!! | ATGACCATGCTGCTTTTTAT+TGG | - | chr7.1:38244316-38244335 | None:intergenic | 35.0% |
| !!! | CTTAACCCTCTAGTTTTCAT+GGG | - | chr7.1:38241832-38241851 | None:intergenic | 35.0% |
| !!! | TCTTAACCCTCTAGTTTTCA+TGG | - | chr7.1:38241833-38241852 | None:intergenic | 35.0% |
| !!! | TTGTTTTAGGACTTTGACCT+GGG | + | chr7.1:38242225-38242244 | MS.gene89322:intron | 35.0% |
| !!! | TTTGTTTTAGGACTTTGACC+TGG | + | chr7.1:38242224-38242243 | MS.gene89322:intron | 35.0% |
| AAAACTCCTTGTGGAAGAAC+AGG | - | chr7.1:38243199-38243218 | None:intergenic | 40.0% | |
| AAGACTTGTGAAATGCCAGA+TGG | + | chr7.1:38245418-38245437 | MS.gene89322:intron | 40.0% | |
| AATACTTACCCTTCCACCAT+CGG | - | chr7.1:38244808-38244827 | None:intergenic | 40.0% | |
| AATTGAAGAAGCCACTCATC+CGG | - | chr7.1:38242783-38242802 | None:intergenic | 40.0% | |
| ACAATGCCATCAGAGTTTAC+CGG | + | chr7.1:38244459-38244478 | MS.gene89322:CDS | 40.0% | |
| ACAGCATCCAAGAGATATTC+TGG | - | chr7.1:38244372-38244391 | None:intergenic | 40.0% | |
| ACCAGTGAAAATATCCTCAC+AGG | - | chr7.1:38242632-38242651 | None:intergenic | 40.0% | |
| AGAGAAGGAACTGATGATTC+AGG | + | chr7.1:38242334-38242353 | MS.gene89322:CDS | 40.0% | |
| AGCTGCAAAAGATGCAGTAA+AGG | - | chr7.1:38245951-38245970 | None:intergenic | 40.0% | |
| AGGTAAGTAAAGTCAGACCA+AGG | - | chr7.1:38241777-38241796 | None:intergenic | 40.0% | |
| ATAATAGGTTGCTGAAGACC+TGG | + | chr7.1:38243681-38243700 | MS.gene89322:intron | 40.0% | |
| ATCTCAGTTGAGCTTACAAC+TGG | - | chr7.1:38243080-38243099 | None:intergenic | 40.0% | |
| ATTATGACCGAGCAACTACT+TGG | + | chr7.1:38244114-38244133 | MS.gene89322:CDS | 40.0% | |
| CATGTAGATCCAACAGTGTT+AGG | + | chr7.1:38244427-38244446 | MS.gene89322:CDS | 40.0% | |
| CCAGAAAAGTAATCAGCCTT+TGG | + | chr7.1:38242258-38242277 | MS.gene89322:CDS | 40.0% | |
| CCTTTCCCATGAAAACTAGA+GGG | + | chr7.1:38241824-38241843 | MS.gene89322:intron | 40.0% | |
| CTGGACATTACCATCTTGAA+AGG | + | chr7.1:38245749-38245768 | MS.gene89322:CDS | 40.0% | |
| GAATCAGTTCCCAAGTTCAA+TGG | - | chr7.1:38243769-38243788 | None:intergenic | 40.0% | |
| GACAACTCATAGTCATCCTT+AGG | - | chr7.1:38243895-38243914 | None:intergenic | 40.0% | |
| GCAAATACAGTTTGGGAGAA+GGG | + | chr7.1:38242398-38242417 | MS.gene89322:CDS | 40.0% | |
| GCAAATTGCAAAACTCCTTG+TGG | - | chr7.1:38243208-38243227 | None:intergenic | 40.0% | |
| GCCTATAGTCATAGAAGATC+TGG | + | chr7.1:38245309-38245328 | MS.gene89322:CDS | 40.0% | |
| GGAAACCCAAAAATGTTCCT+TGG | - | chr7.1:38242611-38242630 | None:intergenic | 40.0% | |
| TACAGGTACCTGAAAGGAAA+AGG | + | chr7.1:38245221-38245240 | MS.gene89322:intron | 40.0% | |
| TATCTCTTGGATGCTGTTGT+CGG | + | chr7.1:38244375-38244394 | MS.gene89322:CDS | 40.0% | |
| TATTATCCGACCTGCAGTTA+CGG | + | chr7.1:38243597-38243616 | MS.gene89322:intron | 40.0% | |
| TCAATTTGCATCTGGCATCA+AGG | + | chr7.1:38242797-38242816 | MS.gene89322:CDS | 40.0% | |
| TCCTTTCCCATGAAAACTAG+AGG | + | chr7.1:38241823-38241842 | MS.gene89322:intron | 40.0% | |
| TCTACATGAAGTTTCGTCAG+AGG | - | chr7.1:38244415-38244434 | None:intergenic | 40.0% | |
| TCTCACTTTGTCGACAATGA+TGG | + | chr7.1:38244045-38244064 | MS.gene89322:CDS | 40.0% | |
| TCTCGTCGCAAATACAGTTT+GGG | + | chr7.1:38242391-38242410 | MS.gene89322:CDS | 40.0% | |
| TGAAAATTCATCGTTCCCCA+TGG | - | chr7.1:38244574-38244593 | None:intergenic | 40.0% | |
| TGATCTTATGCCTGAGCTTA+CGG | + | chr7.1:38244548-38244567 | MS.gene89322:CDS | 40.0% | |
| TGGATTTACAGGTACCTGAA+AGG | + | chr7.1:38245215-38245234 | MS.gene89322:intron | 40.0% | |
| TGGCTTCTTCAATTTGCATC+TGG | + | chr7.1:38242789-38242808 | MS.gene89322:CDS | 40.0% | |
| TTGTCCAATTCAGCCATTGA+GGG | - | chr7.1:38244201-38244220 | None:intergenic | 40.0% | |
| TTGTTATAACCCGTAACTGC+AGG | - | chr7.1:38243610-38243629 | None:intergenic | 40.0% | |
| TTGTTCGCGCTAGAAAACTT+TGG | - | chr7.1:38244693-38244712 | None:intergenic | 40.0% | |
| TTTGTCCAATTCAGCCATTG+AGG | - | chr7.1:38244202-38244221 | None:intergenic | 40.0% | |
| ! | AATGCTCTCTGGTATTGAAG+AGG | - | chr7.1:38245572-38245591 | None:intergenic | 40.0% |
| ! | AATGGCACTATGCTGTCTTT+TGG | + | chr7.1:38241582-38241601 | MS.gene89322:CDS | 40.0% |
| ! | ATAGAAGATCTGGAATCCTC+AGG | + | chr7.1:38245319-38245338 | MS.gene89322:CDS | 40.0% |
| ! | CAATGAGCATGGACTTTTCT+TGG | + | chr7.1:38245703-38245722 | MS.gene89322:CDS | 40.0% |
| ! | CTCTTGCCAAGGAACATTTT+TGG | + | chr7.1:38242602-38242621 | MS.gene89322:CDS | 40.0% |
| ! | CTTTGTCGATGCAAAAGTGT+TGG | + | chr7.1:38243431-38243450 | MS.gene89322:intron | 40.0% |
| ! | TAGAAGATCTGGAATCCTCA+GGG | + | chr7.1:38245320-38245339 | MS.gene89322:CDS | 40.0% |
| ! | TCCTGTGAGGATATTTTCAC+TGG | + | chr7.1:38242628-38242647 | MS.gene89322:CDS | 40.0% |
| ! | TGACACTAGTTTAATTCCGG+AGG | + | chr7.1:38242657-38242676 | MS.gene89322:CDS | 40.0% |
| ! | TGGGAACTGATTCTCAAGAT+TGG | + | chr7.1:38243776-38243795 | MS.gene89322:CDS | 40.0% |
| !! | CCAAAGGCTGATTACTTTTC+TGG | - | chr7.1:38242261-38242280 | None:intergenic | 40.0% |
| !! | CTAAATGCAGAGGAGTATTG+CGG | + | chr7.1:38243530-38243549 | MS.gene89322:intron | 40.0% |
| !! | GTGTAGCATTGATAACCTCT+TGG | + | chr7.1:38244910-38244929 | MS.gene89322:intron | 40.0% |
| !! | TAAATGCAGAGGAGTATTGC+GGG | + | chr7.1:38243531-38243550 | MS.gene89322:intron | 40.0% |
| !! | TTCAGGCTTGTTGATTGATG+AGG | + | chr7.1:38244623-38244642 | MS.gene89322:CDS | 40.0% |
| !! | TTTCTGGTAAGCATTTTCCC+AGG | - | chr7.1:38242245-38242264 | None:intergenic | 40.0% |
| !!! | ACATTTTTGGGTTTCCTGTG+AGG | + | chr7.1:38242615-38242634 | MS.gene89322:CDS | 40.0% |
| AAAACCGTTCGAGTACCAGT+TGG | + | chr7.1:38245780-38245799 | MS.gene89322:CDS | 45.0% | |
| AAAATAGATGGCAGCCATCC+AGG | + | chr7.1:38245247-38245266 | MS.gene89322:CDS | 45.0% | |
| AAACCGTTCGAGTACCAGTT+GGG | + | chr7.1:38245781-38245800 | MS.gene89322:CDS | 45.0% | |
| AACGATGAAACAAGCCCAAC+TGG | - | chr7.1:38245798-38245817 | None:intergenic | 45.0% | |
| AAGAAGCTGCGCATTTGACT+TGG | + | chr7.1:38245270-38245289 | MS.gene89322:CDS | 45.0% | |
| ACTGGCACACTTGGTAAACA+TGG | - | chr7.1:38243062-38243081 | None:intergenic | 45.0% | |
| AGATTGCTCAAGTGATCCGA+AGG | + | chr7.1:38245726-38245745 | MS.gene89322:CDS | 45.0% | |
| ATACTTACCCTTCCACCATC+GGG | - | chr7.1:38244807-38244826 | None:intergenic | 45.0% | |
| ATTATCCGACCTGCAGTTAC+GGG | + | chr7.1:38243598-38243617 | MS.gene89322:intron | 45.0% | |
| CAGATGGTATGCAATGAGCA+TGG | + | chr7.1:38245692-38245711 | MS.gene89322:intron | 45.0% | |
| CGCAAATACAGTTTGGGAGA+AGG | + | chr7.1:38242397-38242416 | MS.gene89322:CDS | 45.0% | |
| CTAGGAGTTAGAATGCTCTC+TGG | - | chr7.1:38245583-38245602 | None:intergenic | 45.0% | |
| CTCACACACACTAAATGCAG+AGG | + | chr7.1:38243520-38243539 | MS.gene89322:intron | 45.0% | |
| CTTCATATGCTGCGTTTCGT+AGG | + | chr7.1:38241665-38241684 | MS.gene89322:intron | 45.0% | |
| CTTCTCCATTGTTCCCTCAA+TGG | + | chr7.1:38244185-38244204 | MS.gene89322:CDS | 45.0% | |
| GAAATGCCAGATGGCATTCA+TGG | + | chr7.1:38245427-38245446 | MS.gene89322:intron | 45.0% | |
| GACCCTAGTAATCTGCAGTT+CGG | - | chr7.1:38241805-38241824 | None:intergenic | 45.0% | |
| GCCTGTCTGTCTATATGCAA+CGG | - | chr7.1:38244235-38244254 | None:intergenic | 45.0% | |
| GCTGAATTGGACAAAGCGAT+TGG | + | chr7.1:38244207-38244226 | MS.gene89322:CDS | 45.0% | |
| GGATAGGATGAAGGAGTTGA+GGG | + | chr7.1:38244773-38244792 | MS.gene89322:CDS | 45.0% | |
| GGTCCACTAATAGGCTTCAT+AGG | - | chr7.1:38244672-38244691 | None:intergenic | 45.0% | |
| GTCCGAACTGCAGATTACTA+GGG | + | chr7.1:38241800-38241819 | MS.gene89322:intron | 45.0% | |
| GTCTCGTCGCAAATACAGTT+TGG | + | chr7.1:38242390-38242409 | MS.gene89322:CDS | 45.0% | |
| TACCATTCTTTCAGGGCTGT+TGG | + | chr7.1:38242571-38242590 | MS.gene89322:intron | 45.0% | |
| TATAACCCGTAACTGCAGGT+CGG | - | chr7.1:38243606-38243625 | None:intergenic | 45.0% | |
| TCCATCCTGTGAAAACCTCT+AGG | - | chr7.1:38245918-38245937 | None:intergenic | 45.0% | |
| TCCGTTGCATATAGACAGAC+AGG | + | chr7.1:38244231-38244250 | MS.gene89322:CDS | 45.0% | |
| TGACCGTCTTCAGTACTAGA+AGG | + | chr7.1:38245378-38245397 | MS.gene89322:intron | 45.0% | |
| TGGATAGGATGAAGGAGTTG+AGG | + | chr7.1:38244772-38244791 | MS.gene89322:CDS | 45.0% | |
| TGGTAGAAGAGATATGGCCA+TGG | + | chr7.1:38244022-38244041 | MS.gene89322:CDS | 45.0% | |
| TGTTCCCTCAATGGCTGAAT+TGG | + | chr7.1:38244194-38244213 | MS.gene89322:CDS | 45.0% | |
| TTCAGCCATTGAGGGAACAA+TGG | - | chr7.1:38244193-38244212 | None:intergenic | 45.0% | |
| TTGTCGACAAAGTGAGACCA+TGG | - | chr7.1:38244042-38244061 | None:intergenic | 45.0% | |
| ! | AGATGGTAATGTCCAGCCTT+CGG | - | chr7.1:38245745-38245764 | None:intergenic | 45.0% |
| ! | AGGTTCCTAGAGGTTTTCAC+AGG | + | chr7.1:38245910-38245929 | MS.gene89322:intron | 45.0% |
| ! | GGACCTTCTAGTACTGAAGA+CGG | - | chr7.1:38245384-38245403 | None:intergenic | 45.0% |
| ! | GGCTCTGATAATTCGGAGTT+CGG | - | chr7.1:38245453-38245472 | None:intergenic | 45.0% |
| ! | TCCTAGAGGTTTTCACAGGA+TGG | + | chr7.1:38245914-38245933 | MS.gene89322:CDS | 45.0% |
| ! | TGGCAAATTAGCTCTTGCCA+AGG | + | chr7.1:38242591-38242610 | MS.gene89322:CDS | 45.0% |
| ! | TTGGGCTTGTTTCATCGTTG+AGG | + | chr7.1:38245799-38245818 | MS.gene89322:CDS | 45.0% |
| !! | GAAACGATTTGCTGATCGTG+AGG | + | chr7.1:38244991-38245010 | MS.gene89322:CDS | 45.0% |
| !! | GTCGACAATGATGGACAGTT+TGG | + | chr7.1:38244054-38244073 | MS.gene89322:CDS | 45.0% |
| !!! | CCCTCTAGTTTTCATGGGAA+AGG | - | chr7.1:38241827-38241846 | None:intergenic | 45.0% |
| AAGCCCAACTGGTACTCGAA+CGG | - | chr7.1:38245787-38245806 | None:intergenic | 50.0% | |
| ATGACCGAGCAACTACTTGG+AGG | + | chr7.1:38244117-38244136 | MS.gene89322:CDS | 50.0% | |
| CAGTTTGGAGACACGTCGAA+TGG | + | chr7.1:38244069-38244088 | MS.gene89322:CDS | 50.0% | |
| CGTCCGAACTGCAGATTACT+AGG | + | chr7.1:38241799-38241818 | MS.gene89322:intron | 50.0% | |
| CTCAGGGAACATGCTCATAG+AGG | + | chr7.1:38245336-38245355 | MS.gene89322:CDS | 50.0% | |
| CTCTATGAGCATGTTCCCTG+AGG | - | chr7.1:38245338-38245357 | None:intergenic | 50.0% | |
| CTGGTACCTGTTCTTCCACA+AGG | + | chr7.1:38243190-38243209 | MS.gene89322:CDS | 50.0% | |
| GAGCTTACAACTGGCACACT+TGG | - | chr7.1:38243071-38243090 | None:intergenic | 50.0% | |
| GCATCGGGGGAATAGCATAT+CGG | - | chr7.1:38242117-38242136 | None:intergenic | 50.0% | |
| GCTTTACGGTTCGTTCCAAG+AGG | - | chr7.1:38244928-38244947 | None:intergenic | 50.0% | |
| TAATCTGCAGTTCGGACGAG+AGG | - | chr7.1:38241797-38241816 | None:intergenic | 50.0% | |
| TACTTACCCTTCCACCATCG+GGG | - | chr7.1:38244806-38244825 | None:intergenic | 50.0% | |
| TCAAATGCGCAGCTTCTTCC+TGG | - | chr7.1:38245268-38245287 | None:intergenic | 50.0% | |
| TGACATGCACAGGTTCCTAG+AGG | + | chr7.1:38245900-38245919 | MS.gene89322:intron | 50.0% | |
| TGCCAACAGCCCTGAAAGAA+TGG | - | chr7.1:38242576-38242595 | None:intergenic | 50.0% | |
| TTGAGGGAACTTATCCCCGA+TGG | + | chr7.1:38244789-38244808 | MS.gene89322:CDS | 50.0% | |
| ! | ATCAGCCTTTGGGGAGTATG+TGG | + | chr7.1:38242269-38242288 | MS.gene89322:CDS | 50.0% |
| ! | GGAAGGGGGCTCTGATAATT+CGG | - | chr7.1:38245460-38245479 | None:intergenic | 50.0% |
| ! | TCAGCCTTTGGGGAGTATGT+GGG | + | chr7.1:38242270-38242289 | MS.gene89322:CDS | 50.0% |
| !! | AACTTATCCCCGATGGTGGA+AGG | + | chr7.1:38244796-38244815 | MS.gene89322:CDS | 50.0% |
| !! | ACTTATCCCCGATGGTGGAA+GGG | + | chr7.1:38244797-38244816 | MS.gene89322:CDS | 50.0% |
| ACATTTGATGTGCTGGGGCG+GGG | - | chr7.1:38243564-38243583 | None:intergenic | 55.0% | |
| ACCGAGCAACTACTTGGAGG+CGG | + | chr7.1:38244120-38244139 | MS.gene89322:CDS | 55.0% | |
| ACCGCCTCCAAGTAGTTGCT+CGG | - | chr7.1:38244124-38244143 | None:intergenic | 55.0% | |
| ACGGAGCCGGTAAACTCTGA+TGG | - | chr7.1:38244468-38244487 | None:intergenic | 55.0% | |
| AGGGAACTTATCCCCGATGG+TGG | + | chr7.1:38244792-38244811 | MS.gene89322:CDS | 55.0% | |
| ATGCCTGAGCTTACGGCCAT+GGG | + | chr7.1:38244555-38244574 | MS.gene89322:CDS | 55.0% | |
| ATGCGCAGCTTCTTCCTGGA+TGG | - | chr7.1:38245264-38245283 | None:intergenic | 55.0% | |
| CGGGGACATTTGATGTGCTG+GGG | - | chr7.1:38243569-38243588 | None:intergenic | 55.0% | |
| GACATTTGATGTGCTGGGGC+GGG | - | chr7.1:38243565-38243584 | None:intergenic | 55.0% | |
| GATTTGTGGCTGAACGGAGC+CGG | - | chr7.1:38244481-38244500 | None:intergenic | 55.0% | |
| GCATCTCTTCCTCCAGTGTC+CGG | + | chr7.1:38242761-38242780 | MS.gene89322:intron | 55.0% | |
| GCGGGGACATTTGATGTGCT+GGG | - | chr7.1:38243570-38243589 | None:intergenic | 55.0% | |
| GGACATTTGATGTGCTGGGG+CGG | - | chr7.1:38243566-38243585 | None:intergenic | 55.0% | |
| GTGTTAACCCTCCGGTTCCA+GGG | - | chr7.1:38245482-38245501 | None:intergenic | 55.0% | |
| GTTCGGCCATGAATGCCATC+TGG | - | chr7.1:38245436-38245455 | None:intergenic | 55.0% | |
| TATGCCTGAGCTTACGGCCA+TGG | + | chr7.1:38244554-38244573 | MS.gene89322:CDS | 55.0% | |
| TGCGGGGACATTTGATGTGC+TGG | - | chr7.1:38243571-38243590 | None:intergenic | 55.0% | |
| TGCTCAAGTGATCCGAAGGC+TGG | + | chr7.1:38245730-38245749 | MS.gene89322:CDS | 55.0% | |
| TGTGTGTGAGTTTCGCCGCA+AGG | - | chr7.1:38243510-38243529 | None:intergenic | 55.0% | |
| TGTGTTAACCCTCCGGTTCC+AGG | - | chr7.1:38245483-38245502 | None:intergenic | 55.0% | |
| TGTTAACCCTCCGGTTCCAG+GGG | - | chr7.1:38245481-38245500 | None:intergenic | 55.0% | |
| ! | AGCCTTTGGGGAGTATGTGG+GGG | + | chr7.1:38242272-38242291 | MS.gene89322:CDS | 55.0% |
| ! | CAGCCTTTGGGGAGTATGTG+GGG | + | chr7.1:38242271-38242290 | MS.gene89322:CDS | 55.0% |
| ! | GTTGATTGATGAGGCGCCAC+AGG | + | chr7.1:38244632-38244651 | MS.gene89322:CDS | 55.0% |
| ! | TGATGAGGCGCCACAGGAAA+AGG | + | chr7.1:38244638-38244657 | MS.gene89322:CDS | 55.0% |
| CATTTGATGTGCTGGGGCGG+GGG | - | chr7.1:38243563-38243582 | None:intergenic | 60.0% | |
| GAAGCCACTCATCCGGACAC+TGG | - | chr7.1:38242776-38242795 | None:intergenic | 60.0% | |
| TCCCCCCACATACTCCCCAA+AGG | - | chr7.1:38242277-38242296 | None:intergenic | 60.0% | |
| TCCTCCAGTGTCCGGATGAG+TGG | + | chr7.1:38242769-38242788 | MS.gene89322:intron | 60.0% | |
| TGCCTGAGCTTACGGCCATG+GGG | + | chr7.1:38244556-38244575 | MS.gene89322:CDS | 60.0% | |
| TTATCAGAGCCCCCTTCCCC+TGG | + | chr7.1:38245462-38245481 | MS.gene89322:intron | 60.0% | |
| TTCCCCATGGCCGTAAGCTC+AGG | - | chr7.1:38244561-38244580 | None:intergenic | 60.0% | |
| ! | GCCTTTGGGGAGTATGTGGG+GGG | + | chr7.1:38242273-38242292 | MS.gene89322:CDS | 60.0% |
| AACCCTCCGGTTCCAGGGGA+AGG | - | chr7.1:38245477-38245496 | None:intergenic | 65.0% | |
| ACCCTCCGGTTCCAGGGGAA+GGG | - | chr7.1:38245476-38245495 | None:intergenic | 65.0% | |
| GCCACTCATCCGGACACTGG+AGG | - | chr7.1:38242773-38242792 | None:intergenic | 65.0% | |
| CCCCTTCCCCTGGAACCGGA+GGG | + | chr7.1:38245472-38245491 | MS.gene89322:intron | 70.0% | |
| CCCTCCGGTTCCAGGGGAAG+GGG | - | chr7.1:38245475-38245494 | None:intergenic | 70.0% | |
| CCTCCGGTTCCAGGGGAAGG+GGG | - | chr7.1:38245474-38245493 | None:intergenic | 70.0% | |
| GAGCCCCCTTCCCCTGGAAC+CGG | + | chr7.1:38245468-38245487 | MS.gene89322:intron | 70.0% | |
| CCCCCTTCCCCTGGAACCGG+AGG | + | chr7.1:38245471-38245490 | MS.gene89322:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 38241530 | 38245992 | 38241530 | ID=MS.gene89322 |
| chr7.1 | mRNA | 38241530 | 38245992 | 38241530 | ID=MS.gene89322.t1;Parent=MS.gene89322 |
| chr7.1 | exon | 38241530 | 38241627 | 38241530 | ID=MS.gene89322.t1.exon1;Parent=MS.gene89322.t1 |
| chr7.1 | CDS | 38241530 | 38241627 | 38241530 | ID=cds.MS.gene89322.t1;Parent=MS.gene89322.t1 |
| chr7.1 | exon | 38242234 | 38242419 | 38242234 | ID=MS.gene89322.t1.exon2;Parent=MS.gene89322.t1 |
| chr7.1 | CDS | 38242234 | 38242419 | 38242234 | ID=cds.MS.gene89322.t1;Parent=MS.gene89322.t1 |
| chr7.1 | exon | 38242585 | 38242678 | 38242585 | ID=MS.gene89322.t1.exon3;Parent=MS.gene89322.t1 |
| chr7.1 | CDS | 38242585 | 38242678 | 38242585 | ID=cds.MS.gene89322.t1;Parent=MS.gene89322.t1 |
| chr7.1 | exon | 38242777 | 38242818 | 38242777 | ID=MS.gene89322.t1.exon4;Parent=MS.gene89322.t1 |
| chr7.1 | CDS | 38242777 | 38242818 | 38242777 | ID=cds.MS.gene89322.t1;Parent=MS.gene89322.t1 |
| chr7.1 | exon | 38243181 | 38243240 | 38243181 | ID=MS.gene89322.t1.exon5;Parent=MS.gene89322.t1 |
| chr7.1 | CDS | 38243181 | 38243240 | 38243181 | ID=cds.MS.gene89322.t1;Parent=MS.gene89322.t1 |
| chr7.1 | exon | 38243688 | 38244818 | 38243688 | ID=MS.gene89322.t1.exon6;Parent=MS.gene89322.t1 |
| chr7.1 | CDS | 38243688 | 38244818 | 38243688 | ID=cds.MS.gene89322.t1;Parent=MS.gene89322.t1 |
| chr7.1 | exon | 38244911 | 38245012 | 38244911 | ID=MS.gene89322.t1.exon7;Parent=MS.gene89322.t1 |
| chr7.1 | CDS | 38244911 | 38245012 | 38244911 | ID=cds.MS.gene89322.t1;Parent=MS.gene89322.t1 |
| chr7.1 | exon | 38245226 | 38245357 | 38245226 | ID=MS.gene89322.t1.exon8;Parent=MS.gene89322.t1 |
| chr7.1 | CDS | 38245226 | 38245357 | 38245226 | ID=cds.MS.gene89322.t1;Parent=MS.gene89322.t1 |
| chr7.1 | exon | 38245695 | 38245820 | 38245695 | ID=MS.gene89322.t1.exon9;Parent=MS.gene89322.t1 |
| chr7.1 | CDS | 38245695 | 38245820 | 38245695 | ID=cds.MS.gene89322.t1;Parent=MS.gene89322.t1 |
| chr7.1 | exon | 38245912 | 38245992 | 38245912 | ID=MS.gene89322.t1.exon10;Parent=MS.gene89322.t1 |
| chr7.1 | CDS | 38245912 | 38245992 | 38245912 | ID=cds.MS.gene89322.t1;Parent=MS.gene89322.t1 |
| Gene Sequence |
| Protein sequence |
