Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89902.t1 | XP_003604630.1 | 99.5 | 436 | 2 | 0 | 1 | 436 | 75 | 510 | 8.40E-250 | 872.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89902.t1 | Q8S4F6 | 71.6 | 433 | 121 | 1 | 4 | 434 | 75 | 507 | 4.2e-181 | 635.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89902.t1 | G7JN01 | 99.5 | 436 | 2 | 0 | 1 | 436 | 75 | 510 | 6.1e-250 | 872.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052746 | MS.gene89902 | 0.889308 | 2.72E-73 | -1.69E-46 |
| MS.gene056638 | MS.gene89902 | 0.804009 | 2.65E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89902.t1 | MTR_4g015260 | 99.541 | 436 | 2 | 0 | 1 | 436 | 75 | 510 | 0.0 | 894 |
| MS.gene89902.t1 | MTR_4g015260 | 99.467 | 375 | 2 | 0 | 62 | 436 | 1 | 375 | 0.0 | 764 |
| MS.gene89902.t1 | MTR_7g067340 | 83.252 | 412 | 69 | 0 | 24 | 435 | 101 | 512 | 0.0 | 724 |
| MS.gene89902.t1 | MTR_4g015250 | 68.000 | 50 | 11 | 1 | 379 | 423 | 1 | 50 | 5.08e-17 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89902.t1 | AT5G01220 | 74.827 | 433 | 107 | 1 | 4 | 434 | 75 | 507 | 0.0 | 687 |
| MS.gene89902.t1 | AT5G01220 | 76.705 | 352 | 80 | 1 | 4 | 353 | 75 | 426 | 0.0 | 564 |
Find 97 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTACAATACTGCTATT+TGG | 0.201513 | 4.2:+86204593 | MS.gene89902:CDS |
| GTCTCAGAGGCTCTGTCTTC+AGG | 0.203326 | 4.2:+86204346 | MS.gene89902:CDS |
| GAAGATCAAGATGGCAAAAT+TGG | 0.239959 | 4.2:+86204418 | MS.gene89902:CDS |
| ACAATACTGCTATTTGGTTT+TGG | 0.272252 | 4.2:+86204599 | MS.gene89902:CDS |
| TGATCTTCGGTGATTATGTC+TGG | 0.304902 | 4.2:-86204403 | None:intergenic |
| TATAAAGTACCTTCGAGAAA+TGG | 0.321891 | 4.2:+86200857 | MS.gene89902:CDS |
| ATGAAAGAAACTCACGAAAA+AGG | 0.328278 | 4.2:-86199638 | None:intergenic |
| CAGCTAACAAGATCCGTCTT+TGG | 0.335760 | 4.2:+86202951 | MS.gene89902:intron |
| ACAATAGCGATTCGTGCTTC+AGG | 0.349145 | 4.2:-86203617 | None:intergenic |
| CGCATCATCACCTGGCATAA+TGG | 0.349858 | 4.2:+86201715 | MS.gene89902:CDS |
| ATTTCATGTGACTTGTACTT+AGG | 0.354414 | 4.2:-86203004 | None:intergenic |
| TTCCTAGATACACATTTAGT+TGG | 0.367508 | 4.2:+86202357 | MS.gene89902:CDS |
| TCTCAGAGGCTCTGTCTTCA+GGG | 0.381353 | 4.2:+86204347 | MS.gene89902:CDS |
| TCAATTACCTATACAACTTC+GGG | 0.383739 | 4.2:-86204685 | None:intergenic |
| TGTGCTCCATAAAATTCTTT+CGG | 0.394473 | 4.2:-86201125 | None:intergenic |
| ATTATTCATGTTGGGCGTCT+TGG | 0.399379 | 4.2:+86203146 | MS.gene89902:CDS |
| TGAATAATCAAGGGCTTCTC+TGG | 0.401493 | 4.2:-86203131 | None:intergenic |
| AGCCCTTGATTATTCATGTT+GGG | 0.416627 | 4.2:+86203138 | MS.gene89902:CDS |
| ATAAAGTACCTTCGAGAAAT+GGG | 0.417934 | 4.2:+86200858 | MS.gene89902:CDS |
| GTCTTCAGGGATTCCTGTTG+TGG | 0.423339 | 4.2:+86204360 | MS.gene89902:CDS |
| ATATCATTCAAAACAGAATC+AGG | 0.424694 | 4.2:-86199572 | None:intergenic |
| AAAAGCCGCGCGTATAGAAA+TGG | 0.427629 | 4.2:+86204528 | MS.gene89902:CDS |
| CCGGCACGTGCGCCCACAAC+AGG | 0.441624 | 4.2:-86204373 | None:intergenic |
| GAAGCACGAATCGCTATTGT+TGG | 0.443160 | 4.2:+86203620 | MS.gene89902:CDS |
| CACAATTAATTGGATCCAAA+AGG | 0.443175 | 4.2:+86201144 | MS.gene89902:CDS |
| AAATATGTTTCGTTAGCCAT+TGG | 0.444300 | 4.2:-86204654 | None:intergenic |
| GAGCTAGAGAAATTGTTAGA+AGG | 0.445162 | 4.2:+86204214 | MS.gene89902:CDS |
| CCTGTTGTGGGCGCACGTGC+CGG | 0.452177 | 4.2:+86204373 | MS.gene89902:CDS |
| TTCAATTACCTATACAACTT+CGG | 0.454803 | 4.2:-86204686 | None:intergenic |
| TCTTCAGGGATTCCTGTTGT+GGG | 0.460643 | 4.2:+86204361 | MS.gene89902:CDS |
| GATCTTCGGTGATTATGTCT+GGG | 0.471115 | 4.2:-86204402 | None:intergenic |
| ATGTAACTTACACTGGTACA+TGG | 0.476399 | 4.2:-86202069 | None:intergenic |
| GCAACCGCTGAAATTATTCT+CGG | 0.493591 | 4.2:-86201668 | None:intergenic |
| ACCTTCTGATACCAAGGAAA+AGG | 0.494486 | 4.2:-86201623 | None:intergenic |
| AGCCAACTAAATGTGTATCT+AGG | 0.495411 | 4.2:-86202359 | None:intergenic |
| AATGGAGAAGTATGACTGGA+GGG | 0.497567 | 4.2:+86204546 | MS.gene89902:CDS |
| AACATTCCTGTGAATACTAC+AGG | 0.502930 | 4.2:-86204241 | None:intergenic |
| ACGCCCAACATGAATAATCA+AGG | 0.504182 | 4.2:-86203141 | None:intergenic |
| AAGCAATCGTCGAGATCACC+TGG | 0.504324 | 4.2:-86204454 | None:intergenic |
| TATTCACAGGAATGTTAAGC+GGG | 0.510418 | 4.2:+86204248 | MS.gene89902:CDS |
| CCTATACAACTTCGGGAGAC+GGG | 0.510470 | 4.2:-86204678 | None:intergenic |
| CTAGTGCCATCCGTTGCCAT+TGG | 0.511144 | 4.2:+86202551 | MS.gene89902:CDS |
| GAAGAAGCTAGAGTAACAAC+AGG | 0.518580 | 4.2:+86202584 | MS.gene89902:CDS |
| TTCAGAGTATGTTACCTGTA+GGG | 0.520308 | 4.2:-86203650 | None:intergenic |
| ACCTATACAACTTCGGGAGA+CGG | 0.521685 | 4.2:-86204679 | None:intergenic |
| CGAATCGCTATTGTTGGAGA+TGG | 0.527504 | 4.2:+86203626 | MS.gene89902:CDS |
| GTATGATATGACATAACAAT+GGG | 0.528218 | 4.2:-86202046 | None:intergenic |
| CAAGATCCGTCTTTGGAACA+AGG | 0.529732 | 4.2:+86202958 | MS.gene89902:CDS |
| AAGCCCTTGATTATTCATGT+TGG | 0.533594 | 4.2:+86203137 | MS.gene89902:CDS |
| ATTGGATATCTCTACACTCC+AGG | 0.535829 | 4.2:+86204436 | MS.gene89902:CDS |
| TGCAAACATACCATTATGCC+AGG | 0.542884 | 4.2:-86201725 | None:intergenic |
| AACTATTGTTACCGTTCCAA+TGG | 0.544153 | 4.2:+86204638 | MS.gene89902:CDS |
| CGGACTAAGTGCCAAGGAGA+GGG | 0.545703 | 4.2:-86201648 | None:intergenic |
| GTTGTGGGCGCACGTGCCGG+TGG | 0.550499 | 4.2:+86204376 | MS.gene89902:CDS |
| GACAACTTGACCAAGTGTCT+CGG | 0.550994 | 4.2:-86204326 | None:intergenic |
| TGTAACTTACACTGGTACAT+GGG | 0.551422 | 4.2:-86202068 | None:intergenic |
| GATGATGCGTGTATTATGTC+AGG | 0.553406 | 4.2:-86201701 | None:intergenic |
| TCAGAAGGTACCCCTCTCCT+TGG | 0.553771 | 4.2:+86201637 | MS.gene89902:CDS |
| GGCATGCCTGTAGTATTCAC+AGG | 0.556036 | 4.2:+86204235 | MS.gene89902:CDS |
| CACACGACTTTGCAGTGTCA+TGG | 0.562589 | 4.2:+86203586 | MS.gene89902:intron |
| CCGTCAGAGTCCGAGACACT+TGG | 0.566913 | 4.2:+86204316 | MS.gene89902:CDS |
| TAGAAATGGAGAAGTATGAC+TGG | 0.568964 | 4.2:+86204542 | MS.gene89902:CDS |
| GCTAGTGCAACCAATGTGGT+TGG | 0.577453 | 4.2:+86202379 | MS.gene89902:CDS |
| ATAATACACGCATCATCACC+TGG | 0.577775 | 4.2:+86201707 | MS.gene89902:CDS |
| AGGGGTACCTTCTGATACCA+AGG | 0.581471 | 4.2:-86201629 | None:intergenic |
| CGTAGAGTTGAGAGAAACGA+TGG | 0.586580 | 4.2:+86204504 | MS.gene89902:CDS |
| TTGTTGGAGATGGACCCTAC+AGG | 0.587255 | 4.2:+86203636 | MS.gene89902:CDS |
| GGTATGATATGACATAACAA+TGG | 0.590253 | 4.2:-86202047 | None:intergenic |
| GACTTTGCAGTGTCATGGAT+AGG | 0.595761 | 4.2:+86203591 | MS.gene89902:intron |
| CCTCATCTCCCATTTCTCGA+AGG | 0.599834 | 4.2:-86200866 | None:intergenic |
| CAACACCCTTGTTCCAAAGA+CGG | 0.603176 | 4.2:-86202964 | None:intergenic |
| AAATGGAGAAGTATGACTGG+AGG | 0.604480 | 4.2:+86204545 | MS.gene89902:CDS |
| GATTATGTCTGGGATTCCAC+CGG | 0.604568 | 4.2:-86204392 | None:intergenic |
| CCTTCGAGAAATGGGAGATG+AGG | 0.605105 | 4.2:+86200866 | MS.gene89902:CDS |
| CGCCCAACATGAATAATCAA+GGG | 0.606295 | 4.2:-86203140 | None:intergenic |
| GAATTCTAGAGATGAAGAAG+AGG | 0.606553 | 4.2:+86199544 | MS.gene89902:CDS |
| CTTCTCCATTTCTATACGCG+CGG | 0.612202 | 4.2:-86204533 | None:intergenic |
| TCGGACTAAGTGCCAAGGAG+AGG | 0.624278 | 4.2:-86201649 | None:intergenic |
| ATGGTCGTGACAACACATGA+AGG | 0.624957 | 4.2:+86201098 | MS.gene89902:CDS |
| TATTCTCGGACTAAGTGCCA+AGG | 0.627907 | 4.2:-86201654 | None:intergenic |
| TGTTTCGTTAGCCATTGGAA+CGG | 0.629285 | 4.2:-86204649 | None:intergenic |
| TAGTCCGAGAATAATTTCAG+CGG | 0.636839 | 4.2:+86201664 | MS.gene89902:CDS |
| AACTCTACGTCATGCAACAG+AGG | 0.641063 | 4.2:-86204490 | None:intergenic |
| TTATCTCAAGCATATGCTAG+TGG | 0.642840 | 4.2:+86204277 | MS.gene89902:CDS |
| GGACTAAGTGCCAAGGAGAG+GGG | 0.646296 | 4.2:-86201647 | None:intergenic |
| ATACTTAGAACCAACCACAT+TGG | 0.648026 | 4.2:-86202389 | None:intergenic |
| CCAAGTGTCTCGGACTCTGA+CGG | 0.649173 | 4.2:-86204316 | None:intergenic |
| AATTCTAGAGATGAAGAAGA+GGG | 0.652792 | 4.2:+86199545 | MS.gene89902:CDS |
| ATAATCACCGAAGATCAAGA+TGG | 0.654411 | 4.2:+86204409 | MS.gene89902:CDS |
| GTATTCACAGGAATGTTAAG+CGG | 0.659850 | 4.2:+86204247 | MS.gene89902:CDS |
| AAGATCCGTCTTTGGAACAA+GGG | 0.660742 | 4.2:+86202959 | MS.gene89902:CDS |
| ACTTGGTCAAGTTGTCTCAG+AGG | 0.674209 | 4.2:+86204333 | MS.gene89902:CDS |
| ATGAAATGCGATTAAGACTG+AGG | 0.676913 | 4.2:+86203020 | MS.gene89902:CDS |
| GTAGAGTTGAGAGAAACGAT+GGG | 0.679056 | 4.2:+86204505 | MS.gene89902:CDS |
| TCATTCAAAACAGAATCAGG+AGG | 0.706543 | 4.2:-86199569 | None:intergenic |
| ATTCACAGGAATGTTAAGCG+GGG | 0.713944 | 4.2:+86204249 | MS.gene89902:CDS |
| GTTGGCTAGTGCAACCAATG+TGG | 0.714392 | 4.2:+86202375 | MS.gene89902:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTATAATAAAAAAA+TGG | - | chr4.2:86199695-86199714 | None:intergenic | 0.0% |
| !! | AAAAATTATAATAAAAAAAT+GGG | - | chr4.2:86199694-86199713 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAATTGAATGA+AGG | - | chr4.2:86202431-86202450 | None:intergenic | 10.0% |
| !! | ATAAAATAAACTAAAAATTG+AGG | - | chr4.2:86200940-86200959 | None:intergenic | 10.0% |
| !!! | TATAATTTTTTGTCAAATAA+CGG | + | chr4.2:86202143-86202162 | MS.gene89902:intron | 10.0% |
| !! | AAATTATTAGTATGAAGTTA+TGG | - | chr4.2:86201571-86201590 | None:intergenic | 15.0% |
| !! | AATATAAAGTGATTTATGTT+TGG | + | chr4.2:86200145-86200164 | MS.gene89902:intron | 15.0% |
| !! | TCTAATATAAACTAAATTTC+AGG | + | chr4.2:86201985-86202004 | MS.gene89902:intron | 15.0% |
| !!! | CATTTTATTTAAATTCAACT+AGG | + | chr4.2:86203985-86204004 | MS.gene89902:intron | 15.0% |
| !!! | TCTTTTTTTGTTATATTGTT+TGG | + | chr4.2:86200031-86200050 | MS.gene89902:intron | 15.0% |
| !! | AAAATTACAATACTGCTATT+TGG | + | chr4.2:86204593-86204612 | MS.gene89902:CDS | 20.0% |
| !! | AATAAGTCATTTGTAAATTG+AGG | - | chr4.2:86201463-86201482 | None:intergenic | 20.0% |
| !! | ATAAGTCATTTGTAAATTGA+GGG | - | chr4.2:86201462-86201481 | None:intergenic | 20.0% |
| !! | CATTAATGTAAAATCAACTT+TGG | + | chr4.2:86201865-86201884 | MS.gene89902:intron | 20.0% |
| !! | GAGTTAAATAAGCATATATT+TGG | - | chr4.2:86201964-86201983 | None:intergenic | 20.0% |
| !! | TATATTTGTGCATGTTATAT+AGG | + | chr4.2:86201073-86201092 | MS.gene89902:intron | 20.0% |
| !!! | AATATTTGTTGTTAACTTAC+AGG | + | chr4.2:86204188-86204207 | MS.gene89902:intron | 20.0% |
| !!! | AGAGTTTAGATTTTCTTAAA+AGG | + | chr4.2:86203177-86203196 | MS.gene89902:CDS | 20.0% |
| !!! | ATAGATCAATGATTTGAAAT+TGG | + | chr4.2:86199999-86200018 | MS.gene89902:intron | 20.0% |
| !!! | ATATTTGTTGTTAACTTACA+GGG | + | chr4.2:86204189-86204208 | MS.gene89902:intron | 20.0% |
| !!! | ATTTTGAACAGATAGTAATT+TGG | + | chr4.2:86200775-86200794 | MS.gene89902:intron | 20.0% |
| !!! | GTTTGACTTAATTTTATCTT+TGG | - | chr4.2:86202736-86202755 | None:intergenic | 20.0% |
| !!! | TAAACTAAATTTCAGGTTTT+TGG | + | chr4.2:86201992-86202011 | MS.gene89902:intron | 20.0% |
| !!! | TAATACTGTTTTTCTTATGA+AGG | - | chr4.2:86200748-86200767 | None:intergenic | 20.0% |
| !!! | TAGTTCTTTCTTTAATTTTC+TGG | - | chr4.2:86203746-86203765 | None:intergenic | 20.0% |
| !!! | TGGTTGATCTTTATTTTTTT+TGG | + | chr4.2:86202324-86202343 | MS.gene89902:intron | 20.0% |
| !!! | TTTTAAGAGACAAGAAATAA+TGG | + | chr4.2:86204107-86204126 | MS.gene89902:intron | 20.0% |
| ! | AATTAAGCTATTATCCAAAC+CGG | - | chr4.2:86202669-86202688 | None:intergenic | 25.0% |
| ! | ACTTTGTCGATGAAAAAATT+AGG | - | chr4.2:86200978-86200997 | None:intergenic | 25.0% |
| ! | ATAGATCAATGCTTTGATAT+TGG | + | chr4.2:86199877-86199896 | MS.gene89902:intron | 25.0% |
| ! | ATATCATTCAAAACAGAATC+AGG | - | chr4.2:86199575-86199594 | None:intergenic | 25.0% |
| ! | GAAAACATATCTTGTAAAAG+TGG | - | chr4.2:86203325-86203344 | None:intergenic | 25.0% |
| ! | GTAAAATATGTAACTTACAC+TGG | - | chr4.2:86202079-86202098 | None:intergenic | 25.0% |
| ! | GTATGATATGACATAACAAT+GGG | - | chr4.2:86202049-86202068 | None:intergenic | 25.0% |
| ! | TAATGTAAAATCAACTTTGG+AGG | + | chr4.2:86201868-86201887 | MS.gene89902:intron | 25.0% |
| ! | TAGAGTTTGATGAATTTGAT+TGG | + | chr4.2:86199842-86199861 | MS.gene89902:intron | 25.0% |
| ! | TAGATATCATCTTGTAAACT+GGG | + | chr4.2:86203201-86203220 | MS.gene89902:intron | 25.0% |
| ! | TATTCTCTTCAGGAAAAAAT+TGG | + | chr4.2:86201504-86201523 | MS.gene89902:intron | 25.0% |
| ! | TCTTGAGATTAAAAAACTAC+TGG | + | chr4.2:86202295-86202314 | MS.gene89902:intron | 25.0% |
| ! | TGGGTTAAACAATAAATTTG+AGG | + | chr4.2:86200185-86200204 | MS.gene89902:intron | 25.0% |
| ! | TTAGATATCATCTTGTAAAC+TGG | + | chr4.2:86203200-86203219 | MS.gene89902:intron | 25.0% |
| ! | TTCACTAATGACTTTCTAAT+GGG | + | chr4.2:86203718-86203737 | MS.gene89902:intron | 25.0% |
| ! | TTCTAGCATTGTAAAATCTA+TGG | + | chr4.2:86204154-86204173 | MS.gene89902:intron | 25.0% |
| ! | TTTCACTAATGACTTTCTAA+TGG | + | chr4.2:86203717-86203736 | MS.gene89902:intron | 25.0% |
| !! | ACATAAAGTAAAGTGCATTT+TGG | - | chr4.2:86203528-86203547 | None:intergenic | 25.0% |
| !! | ATGCACAAAGTTTGAAATAA+TGG | + | chr4.2:86203064-86203083 | MS.gene89902:intron | 25.0% |
| !! | CAATGTGAATGAAATGATTT+TGG | + | chr4.2:86201795-86201814 | MS.gene89902:intron | 25.0% |
| !! | CATATATTTGGTTGCATTTT+TGG | - | chr4.2:86201952-86201971 | None:intergenic | 25.0% |
| !! | TTTTATGGAGCACAATTAAT+TGG | + | chr4.2:86201134-86201153 | MS.gene89902:CDS | 25.0% |
| !!! | ACCATAATCACTTTTTATCA+CGG | - | chr4.2:86200112-86200131 | None:intergenic | 25.0% |
| !!! | AGCATTTTAATATTCTCTTC+AGG | + | chr4.2:86201494-86201513 | MS.gene89902:intron | 25.0% |
| !!! | CTCTGAAATTTCTTTGATTT+TGG | + | chr4.2:86203666-86203685 | MS.gene89902:intron | 25.0% |
| !!! | TAAAAAACTACTGGTTCTTA+TGG | + | chr4.2:86202304-86202323 | MS.gene89902:intron | 25.0% |
| AAATATGTTTCGTTAGCCAT+TGG | - | chr4.2:86204657-86204676 | None:intergenic | 30.0% | |
| AACCAGAAAACATGGAATTA+TGG | - | chr4.2:86200661-86200680 | None:intergenic | 30.0% | |
| AATCCTGCAGTTAATAAATG+AGG | - | chr4.2:86201767-86201786 | None:intergenic | 30.0% | |
| AGCTATTAATTTACGATCGT+AGG | - | chr4.2:86203450-86203469 | None:intergenic | 30.0% | |
| ATGAAAGAAACTCACGAAAA+AGG | - | chr4.2:86199641-86199660 | None:intergenic | 30.0% | |
| ATTAAGCTATTATCCAAACC+GGG | - | chr4.2:86202668-86202687 | None:intergenic | 30.0% | |
| CACAATTAATTGGATCCAAA+AGG | + | chr4.2:86201144-86201163 | MS.gene89902:CDS | 30.0% | |
| CATGTTGAAACATGTTACAT+AGG | + | chr4.2:86199748-86199767 | MS.gene89902:intron | 30.0% | |
| CCTCAAGTTAGAATTAATTC+CGG | + | chr4.2:86200248-86200267 | MS.gene89902:intron | 30.0% | |
| CGATGAAAAAATTAGGAAAC+AGG | - | chr4.2:86200971-86200990 | None:intergenic | 30.0% | |
| CTATCAGTCAATTATCTAGA+TGG | + | chr4.2:86203840-86203859 | MS.gene89902:intron | 30.0% | |
| GGATACATTAATGTGAAAGT+GGG | + | chr4.2:86200166-86200185 | MS.gene89902:intron | 30.0% | |
| GGTATGATATGACATAACAA+TGG | - | chr4.2:86202050-86202069 | None:intergenic | 30.0% | |
| GTTAATAAATGAGGAGATAG+AGG | - | chr4.2:86201758-86201777 | None:intergenic | 30.0% | |
| TACGTTTGTGCATGTAATAT+AGG | + | chr4.2:86200997-86201016 | MS.gene89902:intron | 30.0% | |
| TGGATACATTAATGTGAAAG+TGG | + | chr4.2:86200165-86200184 | MS.gene89902:intron | 30.0% | |
| TGGTATTAAATAGCTAATCG+CGG | - | chr4.2:86202214-86202233 | None:intergenic | 30.0% | |
| TGTGCTCCATAAAATTCTTT+CGG | - | chr4.2:86201128-86201147 | None:intergenic | 30.0% | |
| TTAGTATGAAGTTATGGATG+TGG | - | chr4.2:86201565-86201584 | None:intergenic | 30.0% | |
| TTCCTAGATACACATTTAGT+TGG | + | chr4.2:86202357-86202376 | MS.gene89902:CDS | 30.0% | |
| TTGTGCATGAAAATGACAAA+AGG | - | chr4.2:86203052-86203071 | None:intergenic | 30.0% | |
| ! | AACCATAATTCCATGTTTTC+TGG | + | chr4.2:86200656-86200675 | MS.gene89902:intron | 30.0% |
| ! | AATAAACCGAAAACTGCTTT+TGG | + | chr4.2:86202804-86202823 | MS.gene89902:intron | 30.0% |
| ! | AATAACGGTTTGATAACACT+TGG | - | chr4.2:86202234-86202253 | None:intergenic | 30.0% |
| ! | AATTCTAGAGATGAAGAAGA+GGG | + | chr4.2:86199545-86199564 | MS.gene89902:CDS | 30.0% |
| ! | AATTTTGCCATCTTGATCTT+CGG | - | chr4.2:86204419-86204438 | None:intergenic | 30.0% |
| ! | ATAAAGTACCTTCGAGAAAT+GGG | + | chr4.2:86200858-86200877 | MS.gene89902:CDS | 30.0% |
| ! | ATTTCATGTGACTTGTACTT+AGG | - | chr4.2:86203007-86203026 | None:intergenic | 30.0% |
| ! | CATTTTGGACTCAAATACTT+CGG | - | chr4.2:86203513-86203532 | None:intergenic | 30.0% |
| ! | GAGAGTTTAAGATTCAATCA+TGG | - | chr4.2:86201405-86201424 | None:intergenic | 30.0% |
| ! | TATAAAGTACCTTCGAGAAA+TGG | + | chr4.2:86200857-86200876 | MS.gene89902:CDS | 30.0% |
| ! | TATGATTCCAAGTTGAATGA+AGG | - | chr4.2:86202464-86202483 | None:intergenic | 30.0% |
| ! | TTCTTCAAGATCTTTTCCAA+TGG | - | chr4.2:86202570-86202589 | None:intergenic | 30.0% |
| ! | TTTTTCTTCAGATATGTCTC+TGG | + | chr4.2:86200810-86200829 | MS.gene89902:intron | 30.0% |
| !! | ACAATACTGCTATTTGGTTT+TGG | + | chr4.2:86204599-86204618 | MS.gene89902:CDS | 30.0% |
| !! | AGTTTTCGGTTTATTTTCCT+AGG | - | chr4.2:86202799-86202818 | None:intergenic | 30.0% |
| !! | ATATTTGGTTGCATTTTTGG+AGG | - | chr4.2:86201949-86201968 | None:intergenic | 30.0% |
| !! | TTGATGAATTTGATTGGCTT+AGG | + | chr4.2:86199848-86199867 | MS.gene89902:intron | 30.0% |
| AAACAGATGAAGTGCATGTT+TGG | - | chr4.2:86200302-86200321 | None:intergenic | 35.0% | |
| AACAGATGAAGTGCATGTTT+GGG | - | chr4.2:86200301-86200320 | None:intergenic | 35.0% | |
| AACATTCCTGTGAATACTAC+AGG | - | chr4.2:86204244-86204263 | None:intergenic | 35.0% | |
| AACTATTGTTACCGTTCCAA+TGG | + | chr4.2:86204638-86204657 | MS.gene89902:CDS | 35.0% | |
| AAGCCCTTGATTATTCATGT+TGG | + | chr4.2:86203137-86203156 | MS.gene89902:CDS | 35.0% | |
| ACAAAAAGAGCAATTCTACG+AGG | - | chr4.2:86199608-86199627 | None:intergenic | 35.0% | |
| ACAACACTGTCAAATACTAG+AGG | - | chr4.2:86201220-86201239 | None:intergenic | 35.0% | |
| ACAGAAATAGATCCCTTCAA+CGG | + | chr4.2:86203366-86203385 | MS.gene89902:intron | 35.0% | |
| ACTTCTCATCAAAGTTTCCA+AGG | - | chr4.2:86200381-86200400 | None:intergenic | 35.0% | |
| AGAAGTTAAATTCCCGAACA+AGG | + | chr4.2:86200468-86200487 | MS.gene89902:intron | 35.0% | |
| AGCCAACTAAATGTGTATCT+AGG | - | chr4.2:86202362-86202381 | None:intergenic | 35.0% | |
| AGCCCTTGATTATTCATGTT+GGG | + | chr4.2:86203138-86203157 | MS.gene89902:CDS | 35.0% | |
| ATAATCACCGAAGATCAAGA+TGG | + | chr4.2:86204409-86204428 | MS.gene89902:CDS | 35.0% | |
| ATACTTAGAACCAACCACAT+TGG | - | chr4.2:86202392-86202411 | None:intergenic | 35.0% | |
| ATACTTGTGTTATGCAGCAA+TGG | + | chr4.2:86203104-86203123 | MS.gene89902:intron | 35.0% | |
| ATGAAATGCGATTAAGACTG+AGG | + | chr4.2:86203020-86203039 | MS.gene89902:CDS | 35.0% | |
| ATGTAACTTACACTGGTACA+TGG | - | chr4.2:86202072-86202091 | None:intergenic | 35.0% | |
| CAGACAAAAACCAGAAAACA+TGG | - | chr4.2:86200669-86200688 | None:intergenic | 35.0% | |
| CAGCACTTTGTACTAAATTG+CGG | - | chr4.2:86201316-86201335 | None:intergenic | 35.0% | |
| CCGGAATTAATTCTAACTTG+AGG | - | chr4.2:86200251-86200270 | None:intergenic | 35.0% | |
| CGTGAATCGTGCAAAAATAA+CGG | - | chr4.2:86202249-86202268 | None:intergenic | 35.0% | |
| CTATAACTTTGACACTTCTG+CGG | - | chr4.2:86200228-86200247 | None:intergenic | 35.0% | |
| GAAGATCAAGATGGCAAAAT+TGG | + | chr4.2:86204418-86204437 | MS.gene89902:CDS | 35.0% | |
| GAGCTAGAGAAATTGTTAGA+AGG | + | chr4.2:86204214-86204233 | MS.gene89902:CDS | 35.0% | |
| GCCGTGATAAAAAGTGATTA+TGG | + | chr4.2:86200108-86200127 | MS.gene89902:intron | 35.0% | |
| GTATTCACAGGAATGTTAAG+CGG | + | chr4.2:86204247-86204266 | MS.gene89902:CDS | 35.0% | |
| TAGCATTTCTTCTATGCCTT+TGG | + | chr4.2:86202642-86202661 | MS.gene89902:intron | 35.0% | |
| TAGTCCGAGAATAATTTCAG+CGG | + | chr4.2:86201664-86201683 | MS.gene89902:CDS | 35.0% | |
| TATTCACAGGAATGTTAAGC+GGG | + | chr4.2:86204248-86204267 | MS.gene89902:CDS | 35.0% | |
| TCATTCAAAACAGAATCAGG+AGG | - | chr4.2:86199572-86199591 | None:intergenic | 35.0% | |
| TCTCCTCATTTATTAACTGC+AGG | + | chr4.2:86201761-86201780 | MS.gene89902:intron | 35.0% | |
| TGTAACTTACACTGGTACAT+GGG | - | chr4.2:86202071-86202090 | None:intergenic | 35.0% | |
| TGTGCATGTAATATAGGTCT+TGG | + | chr4.2:86201003-86201022 | MS.gene89902:intron | 35.0% | |
| TGTGCATGTTATATAGGTCA+TGG | + | chr4.2:86201079-86201098 | MS.gene89902:intron | 35.0% | |
| TGTGTATCAGATGTTAATGC+AGG | - | chr4.2:86203570-86203589 | None:intergenic | 35.0% | |
| TGTTCAGCTAACACTTGATA+AGG | - | chr4.2:86202621-86202640 | None:intergenic | 35.0% | |
| TTATCTCAAGCATATGCTAG+TGG | + | chr4.2:86204277-86204296 | MS.gene89902:CDS | 35.0% | |
| TTCAGAGTATGTTACCTGTA+GGG | - | chr4.2:86203653-86203672 | None:intergenic | 35.0% | |
| TTGACAGTGTTGTCAAATAG+CGG | + | chr4.2:86201227-86201246 | MS.gene89902:intron | 35.0% | |
| TTGTCAAACGTGGAAAATAG+CGG | + | chr4.2:86203868-86203887 | MS.gene89902:intron | 35.0% | |
| TTGTGAAATAGCATCTACAG+TGG | - | chr4.2:86204029-86204048 | None:intergenic | 35.0% | |
| TTTCAGAGTATGTTACCTGT+AGG | - | chr4.2:86203654-86203673 | None:intergenic | 35.0% | |
| ! | AAGATCTTTTCCAATGGCAA+CGG | - | chr4.2:86202564-86202583 | None:intergenic | 35.0% |
| ! | ACATGTCCAAAAGCAGTTTT+CGG | - | chr4.2:86202813-86202832 | None:intergenic | 35.0% |
| ! | AGCGATTTAAAACCTTGTTC+GGG | - | chr4.2:86200483-86200502 | None:intergenic | 35.0% |
| ! | CAGCGATTTAAAACCTTGTT+CGG | - | chr4.2:86200484-86200503 | None:intergenic | 35.0% |
| ! | GAATTCTAGAGATGAAGAAG+AGG | + | chr4.2:86199544-86199563 | MS.gene89902:CDS | 35.0% |
| ! | GATCAATGTTAGCAACCTTT+TGG | - | chr4.2:86201162-86201181 | None:intergenic | 35.0% |
| ! | GGAAAGTGTGTTACAAAAGT+TGG | + | chr4.2:86204128-86204147 | MS.gene89902:intron | 35.0% |
| ! | GGACGTAAAATTGATTTCAG+AGG | - | chr4.2:86201928-86201947 | None:intergenic | 35.0% |
| ! | TAGAAATGGAGAAGTATGAC+TGG | + | chr4.2:86204542-86204561 | MS.gene89902:CDS | 35.0% |
| ! | TATTTGACTTCGTGTGTGTT+TGG | + | chr4.2:86200081-86200100 | MS.gene89902:intron | 35.0% |
| !! | CACAAAGTGTTGTCAAATAG+TGG | - | chr4.2:86203939-86203958 | None:intergenic | 35.0% |
| !! | TTTGTTGTTAACTTACAGGG+AGG | + | chr4.2:86204192-86204211 | MS.gene89902:intron | 35.0% |
| !!! | AAGGTTTTAAATCGCTGTTG+TGG | + | chr4.2:86200487-86200506 | MS.gene89902:intron | 35.0% |
| !!! | CATGTTTTCTGGTTTTTGTC+TGG | + | chr4.2:86200667-86200686 | MS.gene89902:intron | 35.0% |
| !!! | GGAGTACCGAAAGAATTTTA+TGG | + | chr4.2:86201119-86201138 | MS.gene89902:CDS | 35.0% |
| ACCACTAGTTAGACTGTTTG+AGG | - | chr4.2:86202857-86202876 | None:intergenic | 40.0% | |
| ACCTTCTGATACCAAGGAAA+AGG | - | chr4.2:86201626-86201645 | None:intergenic | 40.0% | |
| ACGCCCAACATGAATAATCA+AGG | - | chr4.2:86203144-86203163 | None:intergenic | 40.0% | |
| ACTCAAATACTTCGGCAGTA+GGG | - | chr4.2:86203505-86203524 | None:intergenic | 40.0% | |
| AGAGGACATGGAGAAACAAA+AGG | - | chr4.2:86201202-86201221 | None:intergenic | 40.0% | |
| ATAATACACGCATCATCACC+TGG | + | chr4.2:86201707-86201726 | MS.gene89902:CDS | 40.0% | |
| ATTATTCATGTTGGGCGTCT+TGG | + | chr4.2:86203146-86203165 | MS.gene89902:CDS | 40.0% | |
| ATTCACAGGAATGTTAAGCG+GGG | + | chr4.2:86204249-86204268 | MS.gene89902:CDS | 40.0% | |
| ATTGATTGAGATCCCGTTGA+AGG | - | chr4.2:86203382-86203401 | None:intergenic | 40.0% | |
| ATTGGATATCTCTACACTCC+AGG | + | chr4.2:86204436-86204455 | MS.gene89902:CDS | 40.0% | |
| CAGAAATAGATCCCTTCAAC+GGG | + | chr4.2:86203367-86203386 | MS.gene89902:intron | 40.0% | |
| CAGTGACACACACTTAATTG+TGG | + | chr4.2:86200568-86200587 | MS.gene89902:intron | 40.0% | |
| CGCCCAACATGAATAATCAA+GGG | - | chr4.2:86203143-86203162 | None:intergenic | 40.0% | |
| CTGTCAAATACTAGAGGACA+TGG | - | chr4.2:86201214-86201233 | None:intergenic | 40.0% | |
| CTTGTTAGCTGGAAATCAAC+AGG | - | chr4.2:86202942-86202961 | None:intergenic | 40.0% | |
| GAAACTCACGAAAAAGGTGA+AGG | - | chr4.2:86199635-86199654 | None:intergenic | 40.0% | |
| GAAGAAGCTAGAGTAACAAC+AGG | + | chr4.2:86202584-86202603 | MS.gene89902:CDS | 40.0% | |
| GAGAGAACCTTCATTCAACT+TGG | + | chr4.2:86202454-86202473 | MS.gene89902:intron | 40.0% | |
| GATCTTCGGTGATTATGTCT+GGG | - | chr4.2:86204405-86204424 | None:intergenic | 40.0% | |
| GATGATGCGTGTATTATGTC+AGG | - | chr4.2:86201704-86201723 | None:intergenic | 40.0% | |
| GCAACCGCTGAAATTATTCT+CGG | - | chr4.2:86201671-86201690 | None:intergenic | 40.0% | |
| GGGAATTACACAGTTACACA+CGG | - | chr4.2:86203484-86203503 | None:intergenic | 40.0% | |
| GTAGAGTTGAGAGAAACGAT+GGG | + | chr4.2:86204505-86204524 | MS.gene89902:CDS | 40.0% | |
| TAAAAAACCTTGACGTGTCG+CGG | + | chr4.2:86200602-86200621 | MS.gene89902:intron | 40.0% | |
| TAGACTATCTTGATGAGCCT+AGG | + | chr4.2:86202779-86202798 | MS.gene89902:intron | 40.0% | |
| TAGGCTCATCAAGATAGTCT+AGG | - | chr4.2:86202780-86202799 | None:intergenic | 40.0% | |
| TCCTCAAACAGTCTAACTAG+TGG | + | chr4.2:86202853-86202872 | MS.gene89902:intron | 40.0% | |
| TCTTAAACTCTCCGTCTCTT+AGG | + | chr4.2:86201413-86201432 | MS.gene89902:intron | 40.0% | |
| TGAATAATCAAGGGCTTCTC+TGG | - | chr4.2:86203134-86203153 | None:intergenic | 40.0% | |
| TGATCTTCGGTGATTATGTC+TGG | - | chr4.2:86204406-86204425 | None:intergenic | 40.0% | |
| TGCAAACATACCATTATGCC+AGG | - | chr4.2:86201728-86201747 | None:intergenic | 40.0% | |
| TGTGTAATGCAATCTCGTTG+AGG | - | chr4.2:86200705-86200724 | None:intergenic | 40.0% | |
| TGTTTCGTTAGCCATTGGAA+CGG | - | chr4.2:86204652-86204671 | None:intergenic | 40.0% | |
| TTCAACGGGATCTCAATCAA+TGG | + | chr4.2:86203381-86203400 | MS.gene89902:intron | 40.0% | |
| TTGATTGAGATCCCGTTGAA+GGG | - | chr4.2:86203381-86203400 | None:intergenic | 40.0% | |
| ! | AAATGGAGAAGTATGACTGG+AGG | + | chr4.2:86204545-86204564 | MS.gene89902:CDS | 40.0% |
| ! | AATGGAGAAGTATGACTGGA+GGG | + | chr4.2:86204546-86204565 | MS.gene89902:CDS | 40.0% |
| ! | ATTAGACTTGCTTGTGACTC+CGG | - | chr4.2:86200270-86200289 | None:intergenic | 40.0% |
| ! | ATTGCAGCTTTCCTTTTCCT+TGG | + | chr4.2:86201612-86201631 | MS.gene89902:intron | 40.0% |
| ! | TCCTTTTCCTTGGTATCAGA+AGG | + | chr4.2:86201622-86201641 | MS.gene89902:CDS | 40.0% |
| !! | AAGATCCGTCTTTGGAACAA+GGG | + | chr4.2:86202959-86202978 | MS.gene89902:CDS | 40.0% |
| !!! | TTGGTTTTGGCGCAAGAAAA+AGG | + | chr4.2:86204612-86204631 | MS.gene89902:CDS | 40.0% |
| AAAAGCCGCGCGTATAGAAA+TGG | + | chr4.2:86204528-86204547 | MS.gene89902:CDS | 45.0% | |
| AACTCTACGTCATGCAACAG+AGG | - | chr4.2:86204493-86204512 | None:intergenic | 45.0% | |
| ACAATAGCGATTCGTGCTTC+AGG | - | chr4.2:86203620-86203639 | None:intergenic | 45.0% | |
| AGTTCCGTATGCCTAAGAGA+CGG | - | chr4.2:86201427-86201446 | None:intergenic | 45.0% | |
| ATGGTCGTGACAACACATGA+AGG | + | chr4.2:86201098-86201117 | MS.gene89902:CDS | 45.0% | |
| CAAAGACGGATCTTGTTAGC+TGG | - | chr4.2:86202953-86202972 | None:intergenic | 45.0% | |
| CAACACCCTTGTTCCAAAGA+CGG | - | chr4.2:86202967-86202986 | None:intergenic | 45.0% | |
| CAGCTAACAAGATCCGTCTT+TGG | + | chr4.2:86202951-86202970 | MS.gene89902:intron | 45.0% | |
| CGAATCGCTATTGTTGGAGA+TGG | + | chr4.2:86203626-86203645 | MS.gene89902:CDS | 45.0% | |
| CGTAGAGTTGAGAGAAACGA+TGG | + | chr4.2:86204504-86204523 | MS.gene89902:CDS | 45.0% | |
| CTCAAATACTTCGGCAGTAG+GGG | - | chr4.2:86203504-86203523 | None:intergenic | 45.0% | |
| CTGTAGTGAAACATGCACCT+TGG | + | chr4.2:86200434-86200453 | MS.gene89902:intron | 45.0% | |
| CTTCTCCATTTCTATACGCG+CGG | - | chr4.2:86204536-86204555 | None:intergenic | 45.0% | |
| GAAGCACGAATCGCTATTGT+TGG | + | chr4.2:86203620-86203639 | MS.gene89902:CDS | 45.0% | |
| GACAACTTGACCAAGTGTCT+CGG | - | chr4.2:86204329-86204348 | None:intergenic | 45.0% | |
| GACTCAAATACTTCGGCAGT+AGG | - | chr4.2:86203506-86203525 | None:intergenic | 45.0% | |
| GACTTTGCAGTGTCATGGAT+AGG | + | chr4.2:86203591-86203610 | MS.gene89902:intron | 45.0% | |
| GATGGCATTGTTGTCAAACG+TGG | + | chr4.2:86203858-86203877 | MS.gene89902:intron | 45.0% | |
| TATTATCCAAACCGGGCCAA+AGG | - | chr4.2:86202661-86202680 | None:intergenic | 45.0% | |
| TATTCTCGGACTAAGTGCCA+AGG | - | chr4.2:86201657-86201676 | None:intergenic | 45.0% | |
| TCTTCAGGGATTCCTGTTGT+GGG | + | chr4.2:86204361-86204380 | MS.gene89902:CDS | 45.0% | |
| TGCGGATCGCAGAACAATAA+TGG | - | chr4.2:86201298-86201317 | None:intergenic | 45.0% | |
| TTGTGGTCGCATCATGAATG+TGG | + | chr4.2:86200504-86200523 | MS.gene89902:intron | 45.0% | |
| TTTCTTCTATGCCTTTGGCC+CGG | + | chr4.2:86202647-86202666 | MS.gene89902:intron | 45.0% | |
| ! | ACTTGGTCAAGTTGTCTCAG+AGG | + | chr4.2:86204333-86204352 | MS.gene89902:CDS | 45.0% |
| ! | GATTATGTCTGGGATTCCAC+CGG | - | chr4.2:86204395-86204414 | None:intergenic | 45.0% |
| ! | TCTTTTCCAATGGCAACGGA+TGG | - | chr4.2:86202560-86202579 | None:intergenic | 45.0% |
| !! | AGCTAGCTTTGTCGTGTGTT+TGG | + | chr4.2:86199960-86199979 | MS.gene89902:intron | 45.0% |
| !! | CAAGATCCGTCTTTGGAACA+AGG | + | chr4.2:86202958-86202977 | MS.gene89902:CDS | 45.0% |
| !! | TTGTCGTGTGTTTGGTTCTG+CGG | + | chr4.2:86199968-86199987 | MS.gene89902:intron | 45.0% |
| !!! | AATTTTTAGTTTATTTTATA+TGG | + | chr4.2:86200941-86200960 | MS.gene89902:intron | 5.0% |
| !!! | GTTTTTTTTTTAAAATTAAT+TGG | + | chr4.2:86199723-86199742 | MS.gene89902:intron | 5.0% |
| AAGCAATCGTCGAGATCACC+TGG | - | chr4.2:86204457-86204476 | None:intergenic | 50.0% | |
| CACACGACTTTGCAGTGTCA+TGG | + | chr4.2:86203586-86203605 | MS.gene89902:intron | 50.0% | |
| CCTCATCTCCCATTTCTCGA+AGG | - | chr4.2:86200869-86200888 | None:intergenic | 50.0% | |
| CCTTCGAGAAATGGGAGATG+AGG | + | chr4.2:86200866-86200885 | MS.gene89902:CDS | 50.0% | |
| CGCATCATCACCTGGCATAA+TGG | + | chr4.2:86201715-86201734 | MS.gene89902:CDS | 50.0% | |
| CTCTCCGTCTCTTAGGCATA+CGG | + | chr4.2:86201420-86201439 | MS.gene89902:intron | 50.0% | |
| GCACTATAGGGTTATAGCGC+AGG | + | chr4.2:86201258-86201277 | MS.gene89902:intron | 50.0% | |
| GCTAGTGCAACCAATGTGGT+TGG | + | chr4.2:86202379-86202398 | MS.gene89902:CDS | 50.0% | |
| GGCATGCCTGTAGTATTCAC+AGG | + | chr4.2:86204235-86204254 | MS.gene89902:CDS | 50.0% | |
| GTCTTCAGGGATTCCTGTTG+TGG | + | chr4.2:86204360-86204379 | MS.gene89902:CDS | 50.0% | |
| GTTGGCTAGTGCAACCAATG+TGG | + | chr4.2:86202375-86202394 | MS.gene89902:CDS | 50.0% | |
| TCTCAGAGGCTCTGTCTTCA+GGG | + | chr4.2:86204347-86204366 | MS.gene89902:CDS | 50.0% | |
| TTGTTGGAGATGGACCCTAC+AGG | + | chr4.2:86203636-86203655 | MS.gene89902:CDS | 50.0% | |
| !! | AGGGGTACCTTCTGATACCA+AGG | - | chr4.2:86201632-86201651 | None:intergenic | 50.0% |
| AGCGGCTACAGCAGCACTAT+AGG | + | chr4.2:86201245-86201264 | MS.gene89902:intron | 55.0% | |
| CCAAGTGTCTCGGACTCTGA+CGG | - | chr4.2:86204319-86204338 | None:intergenic | 55.0% | |
| CGGACTAAGTGCCAAGGAGA+GGG | - | chr4.2:86201651-86201670 | None:intergenic | 55.0% | |
| CTAGTGCCATCCGTTGCCAT+TGG | + | chr4.2:86202551-86202570 | MS.gene89902:CDS | 55.0% | |
| CTGTTGCGACTCATGCACCT+TGG | + | chr4.2:86200361-86200380 | MS.gene89902:intron | 55.0% | |
| GCGGCTACAGCAGCACTATA+GGG | + | chr4.2:86201246-86201265 | MS.gene89902:intron | 55.0% | |
| GGACTAAGTGCCAAGGAGAG+GGG | - | chr4.2:86201650-86201669 | None:intergenic | 55.0% | |
| GTCTCAGAGGCTCTGTCTTC+AGG | + | chr4.2:86204346-86204365 | MS.gene89902:CDS | 55.0% | |
| TCGGACTAAGTGCCAAGGAG+AGG | - | chr4.2:86201652-86201671 | None:intergenic | 55.0% | |
| TCTATGCCTTTGGCCCGGTT+TGG | + | chr4.2:86202652-86202671 | MS.gene89902:intron | 55.0% | |
| !! | TCAGAAGGTACCCCTCTCCT+TGG | + | chr4.2:86201637-86201656 | MS.gene89902:CDS | 55.0% |
| ATTGCAGCCGCGACACGTCA+AGG | - | chr4.2:86200612-86200631 | None:intergenic | 60.0% | |
| CCGTCAGAGTCCGAGACACT+TGG | + | chr4.2:86204316-86204335 | MS.gene89902:CDS | 60.0% | |
| CCTGTTGTGGGCGCACGTGC+CGG | + | chr4.2:86204373-86204392 | MS.gene89902:CDS | 70.0% | |
| CCGGCACGTGCGCCCACAAC+AGG | - | chr4.2:86204376-86204395 | None:intergenic | 75.0% | |
| GTTGTGGGCGCACGTGCCGG+TGG | + | chr4.2:86204376-86204395 | MS.gene89902:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 86199518 | 86204699 | 86199518 | ID=MS.gene89902 |
| chr4.2 | mRNA | 86199518 | 86204699 | 86199518 | ID=MS.gene89902.t1;Parent=MS.gene89902 |
| chr4.2 | exon | 86199518 | 86199645 | 86199518 | ID=MS.gene89902.t1.exon1;Parent=MS.gene89902.t1 |
| chr4.2 | CDS | 86199518 | 86199645 | 86199518 | ID=cds.MS.gene89902.t1;Parent=MS.gene89902.t1 |
| chr4.2 | exon | 86200821 | 86200887 | 86200821 | ID=MS.gene89902.t1.exon2;Parent=MS.gene89902.t1 |
| chr4.2 | CDS | 86200821 | 86200887 | 86200821 | ID=cds.MS.gene89902.t1;Parent=MS.gene89902.t1 |
| chr4.2 | exon | 86201095 | 86201165 | 86201095 | ID=MS.gene89902.t1.exon3;Parent=MS.gene89902.t1 |
| chr4.2 | CDS | 86201095 | 86201165 | 86201095 | ID=cds.MS.gene89902.t1;Parent=MS.gene89902.t1 |
| chr4.2 | exon | 86201619 | 86201736 | 86201619 | ID=MS.gene89902.t1.exon4;Parent=MS.gene89902.t1 |
| chr4.2 | CDS | 86201619 | 86201736 | 86201619 | ID=cds.MS.gene89902.t1;Parent=MS.gene89902.t1 |
| chr4.2 | exon | 86202007 | 86202080 | 86202007 | ID=MS.gene89902.t1.exon5;Parent=MS.gene89902.t1 |
| chr4.2 | CDS | 86202007 | 86202080 | 86202007 | ID=cds.MS.gene89902.t1;Parent=MS.gene89902.t1 |
| chr4.2 | exon | 86202352 | 86202407 | 86202352 | ID=MS.gene89902.t1.exon6;Parent=MS.gene89902.t1 |
| chr4.2 | CDS | 86202352 | 86202407 | 86202352 | ID=cds.MS.gene89902.t1;Parent=MS.gene89902.t1 |
| chr4.2 | exon | 86202522 | 86202605 | 86202522 | ID=MS.gene89902.t1.exon7;Parent=MS.gene89902.t1 |
| chr4.2 | CDS | 86202522 | 86202605 | 86202522 | ID=cds.MS.gene89902.t1;Parent=MS.gene89902.t1 |
| chr4.2 | exon | 86202954 | 86203041 | 86202954 | ID=MS.gene89902.t1.exon8;Parent=MS.gene89902.t1 |
| chr4.2 | CDS | 86202954 | 86203041 | 86202954 | ID=cds.MS.gene89902.t1;Parent=MS.gene89902.t1 |
| chr4.2 | exon | 86203121 | 86203198 | 86203121 | ID=MS.gene89902.t1.exon9;Parent=MS.gene89902.t1 |
| chr4.2 | CDS | 86203121 | 86203198 | 86203121 | ID=cds.MS.gene89902.t1;Parent=MS.gene89902.t1 |
| chr4.2 | exon | 86203601 | 86203657 | 86203601 | ID=MS.gene89902.t1.exon10;Parent=MS.gene89902.t1 |
| chr4.2 | CDS | 86203601 | 86203657 | 86203601 | ID=cds.MS.gene89902.t1;Parent=MS.gene89902.t1 |
| chr4.2 | exon | 86204210 | 86204699 | 86204210 | ID=MS.gene89902.t1.exon11;Parent=MS.gene89902.t1 |
| chr4.2 | CDS | 86204210 | 86204699 | 86204210 | ID=cds.MS.gene89902.t1;Parent=MS.gene89902.t1 |
| Gene Sequence |
| Protein sequence |
