Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90123.t1 | RHN82780.1 | 94.2 | 382 | 10 | 2 | 1 | 382 | 1 | 370 | 1.90E-157 | 565.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90123.t1 | Q9M841 | 63.3 | 392 | 133 | 3 | 1 | 381 | 1 | 392 | 2.6e-118 | 426.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90123.t1 | A0A396JWQ9 | 94.2 | 382 | 10 | 2 | 1 | 382 | 1 | 370 | 1.4e-157 | 565.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene90123 | -0.804668 | 1.93E-49 | -1.69E-46 |
| MS.gene052016 | MS.gene90123 | -0.822842 | 1.91E-53 | -1.69E-46 |
| MS.gene054178 | MS.gene90123 | -0.801649 | 8.15E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene90123 | -0.816117 | 6.52E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene90123 | -0.82793 | 1.19E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90123.t1 | MTR_1g116380 | 93.979 | 382 | 11 | 2 | 1 | 382 | 1 | 370 | 0.0 | 676 |
| MS.gene90123.t1 | MTR_1g116380 | 92.798 | 361 | 14 | 2 | 1 | 361 | 1 | 349 | 0.0 | 630 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90123.t1 | AT3G04460 | 68.112 | 392 | 114 | 3 | 1 | 381 | 1 | 392 | 0.0 | 546 |
| MS.gene90123.t1 | AT3G04460 | 63.231 | 359 | 110 | 5 | 1 | 348 | 1 | 348 | 4.92e-151 | 432 |
Find 96 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATCTGTAATGACAGTTTC+GGG | 0.215838 | 1.1:-81943818 | MS.gene90123:CDS |
| GATCATCGAGATGTTGTTTC+AGG | 0.247590 | 1.1:-81946894 | None:intergenic |
| AGTAAATGTTTACCAGTTCT+TGG | 0.256616 | 1.1:+81946015 | None:intergenic |
| ACCTTTGGTGGTGGAGGAGG+AGG | 0.259002 | 1.1:+81944163 | None:intergenic |
| TCTTTCTCTGAATCCCTTTA+CGG | 0.287351 | 1.1:-81946665 | MS.gene90123:CDS |
| CGGTAACTGTACCCCTTCTT+TGG | 0.289874 | 1.1:+81943886 | None:intergenic |
| AAGGATTCAGGCCACTCTTT+GGG | 0.294501 | 1.1:-81946365 | MS.gene90123:CDS |
| AAAAGATTTCAGAACATTGT+AGG | 0.315747 | 1.1:-81946262 | MS.gene90123:CDS |
| TCCATCTGTAATGACAGTTT+CGG | 0.340942 | 1.1:-81943819 | MS.gene90123:CDS |
| CTTTGGTGGTGGAGGAGGAG+GGG | 0.345450 | 1.1:+81944165 | None:intergenic |
| GTTGCAGGCACCATCGTTGC+TGG | 0.349075 | 1.1:+81943299 | None:intergenic |
| ATTTGTCTCTTTACCTTTGG+TGG | 0.354030 | 1.1:+81944151 | None:intergenic |
| CTCTTTACCTTTGGTGGTGG+AGG | 0.355800 | 1.1:+81944157 | None:intergenic |
| TTTGGTGGTGGAGGAGGAGG+GGG | 0.357847 | 1.1:+81944166 | None:intergenic |
| CAAGGATTCAGGCCACTCTT+TGG | 0.359885 | 1.1:-81946366 | MS.gene90123:CDS |
| CTTATCTGATCAACTGTTGC+AGG | 0.364548 | 1.1:+81943284 | None:intergenic |
| AGAAAGAGAAGCAAGGATTC+AGG | 0.364878 | 1.1:-81946377 | MS.gene90123:CDS |
| AGAGAAGAGAAAGAAGCTTT+TGG | 0.369480 | 1.1:+81946552 | None:intergenic |
| ATACCAGATGTTATACCTAT+TGG | 0.382316 | 1.1:-81946102 | MS.gene90123:CDS |
| CCGTGGTCCTCAATGGATAA+AGG | 0.402747 | 1.1:-81945324 | MS.gene90123:intron |
| TTTACCTTTGGTGGTGGAGG+AGG | 0.411857 | 1.1:+81944160 | None:intergenic |
| ATAACATCTGGTATGCGAAT+TGG | 0.415352 | 1.1:+81946111 | None:intergenic |
| TTTCACAATGCAGACATTGC+AGG | 0.422363 | 1.1:-81944982 | MS.gene90123:intron |
| ATGCAGCTTCGATTTCAGAT+AGG | 0.427187 | 1.1:+81946414 | None:intergenic |
| GTCTTCTACGGAGGCCGTAA+AGG | 0.431086 | 1.1:+81946651 | None:intergenic |
| ATTCATGTCTGCCGAGCTAC+TGG | 0.437858 | 1.1:-81946038 | MS.gene90123:CDS |
| TTATACCTATTGGATGCTAC+TGG | 0.443662 | 1.1:-81946092 | MS.gene90123:CDS |
| TATATTCAAGTTTGTTACTC+AGG | 0.446187 | 1.1:-81943774 | MS.gene90123:intron |
| CCACGCCAACCTTCAATGCT+CGG | 0.446234 | 1.1:-81946309 | MS.gene90123:CDS |
| TCACTAGCGCTGCACGCACT+TGG | 0.452512 | 1.1:-81946062 | MS.gene90123:CDS |
| AACGGAGGCCCGAGCATTGA+AGG | 0.453089 | 1.1:+81946300 | None:intergenic |
| TGTCTCTTTACCTTTGGTGG+TGG | 0.453626 | 1.1:+81944154 | None:intergenic |
| TTTGAACAGGTTGCCAAAGA+AGG | 0.454619 | 1.1:-81943899 | MS.gene90123:intron |
| CCGAGCTACTGGCCAAGAAC+TGG | 0.462234 | 1.1:-81946027 | MS.gene90123:intron |
| CACGCCAACCTTCAATGCTC+GGG | 0.466852 | 1.1:-81946308 | MS.gene90123:CDS |
| CCTTTGGTGGTGGAGGAGGA+GGG | 0.467987 | 1.1:+81944164 | None:intergenic |
| TTGAACAGGTTGCCAAAGAA+GGG | 0.468952 | 1.1:-81943898 | MS.gene90123:intron |
| AGTACCCAGTAGCATCCAAT+AGG | 0.480194 | 1.1:+81946087 | None:intergenic |
| CGCGCTTCTGCAAGCACAGG+GGG | 0.480911 | 1.1:+81943846 | None:intergenic |
| TCTTCTACGGAGGCCGTAAA+GGG | 0.485693 | 1.1:+81946652 | None:intergenic |
| CGTAATCTAATAATTTATGA+AGG | 0.488919 | 1.1:+81946753 | None:intergenic |
| TGCAGCTTCGATTTCAGATA+GGG | 0.489267 | 1.1:+81946415 | None:intergenic |
| AGATATTAGCGGGTCTTCTA+CGG | 0.493212 | 1.1:+81946639 | None:intergenic |
| TTGTTTCAGGTGGGCGGACA+AGG | 0.494695 | 1.1:-81946881 | MS.gene90123:CDS |
| CATCGAGATGTTGTTTCAGG+TGG | 0.496439 | 1.1:-81946891 | None:intergenic |
| CTGCAACAGTTGATCAGATA+AGG | 0.503019 | 1.1:-81943283 | MS.gene90123:CDS |
| AGAGACTCCGTGGTCCTCAA+TGG | 0.507233 | 1.1:-81945331 | MS.gene90123:CDS |
| GTACTTGACTATGCGCAAAC+CGG | 0.509782 | 1.1:-81944933 | MS.gene90123:CDS |
| CACTAGCGCTGCACGCACTT+GGG | 0.511045 | 1.1:-81946061 | MS.gene90123:CDS |
| CATCCAATAGGTATAACATC+TGG | 0.511226 | 1.1:+81946099 | None:intergenic |
| CCAGTTCTTGGCCAGTAGCT+CGG | 0.513806 | 1.1:+81946027 | None:intergenic |
| TTACGCGCTTCTGCAAGCAC+AGG | 0.516034 | 1.1:+81943843 | None:intergenic |
| TTCACAATGCAGACATTGCA+GGG | 0.516616 | 1.1:-81944981 | MS.gene90123:intron |
| TACGCGCTTCTGCAAGCACA+GGG | 0.518671 | 1.1:+81943844 | None:intergenic |
| TCTAATAATTTATGAAGGAA+AGG | 0.519350 | 1.1:+81946758 | None:intergenic |
| CCCGAAACTGTCATTACAGA+TGG | 0.519603 | 1.1:+81943818 | None:intergenic |
| CAGTACCAGCATGTAACAAT+GGG | 0.521765 | 1.1:+81946230 | None:intergenic |
| ATGCAAACCTTTATCCATTG+AGG | 0.525430 | 1.1:+81945317 | None:intergenic |
| TGTTACCCATTGTTACATGC+TGG | 0.527089 | 1.1:-81946235 | MS.gene90123:CDS |
| TTGCAGGCACCATCGTTGCT+GGG | 0.531633 | 1.1:+81943300 | None:intergenic |
| AAATGAATCATATGATTCTA+CGG | 0.537110 | 1.1:-81946335 | MS.gene90123:CDS |
| CCCTCCTCCTCCACCACCAA+AGG | 0.539167 | 1.1:-81944164 | MS.gene90123:intron |
| TCGGCCGACGTTCTTCGAGA+TGG | 0.557939 | 1.1:-81946855 | MS.gene90123:CDS |
| CTGAGTAATGAGATATTAGC+GGG | 0.561587 | 1.1:+81946629 | None:intergenic |
| GCGGCGCTGACATACTCAAT+CGG | 0.561785 | 1.1:-81946800 | MS.gene90123:CDS |
| TTGTTACATGCTGGTACTGA+AGG | 0.562098 | 1.1:-81946226 | MS.gene90123:intron |
| ATCGAGATGTTGTTTCAGGT+GGG | 0.568368 | 1.1:-81946890 | None:intergenic |
| TATACCTATTGGATGCTACT+GGG | 0.579299 | 1.1:-81946091 | MS.gene90123:CDS |
| CACGGAGTCTCTCACGTTCA+CGG | 0.579735 | 1.1:+81945342 | None:intergenic |
| GAGGCCCGAGCATTGAAGGT+TGG | 0.582960 | 1.1:+81946304 | None:intergenic |
| TAAGCGCTGCCCAGCAACGA+TGG | 0.586283 | 1.1:-81943309 | MS.gene90123:CDS |
| GACGTTCTTCGAGATGGCGG+CGG | 0.586732 | 1.1:-81946849 | MS.gene90123:CDS |
| TCAGTACCAGCATGTAACAA+TGG | 0.587924 | 1.1:+81946229 | None:intergenic |
| GGGCAGATCGTTCTGTCTGA+CGG | 0.602588 | 1.1:+81943866 | None:intergenic |
| ATCCTATATAGATGATGGAA+TGG | 0.607504 | 1.1:-81944240 | MS.gene90123:intron |
| AGGTGGGCGGACAAGGAAGT+CGG | 0.608007 | 1.1:-81946874 | MS.gene90123:CDS |
| GAACACTGCTGCAATCAAGC+CGG | 0.608819 | 1.1:+81944914 | None:intergenic |
| TGTGATGCGTGTTGCAACGG+AGG | 0.612083 | 1.1:+81946285 | None:intergenic |
| TGAACAGGTTGCCAAAGAAG+GGG | 0.612370 | 1.1:-81943897 | MS.gene90123:intron |
| GCCGACGTTCTTCGAGATGG+CGG | 0.616688 | 1.1:-81946852 | MS.gene90123:CDS |
| CTATATAGATGATGGAATGG+TGG | 0.619136 | 1.1:-81944237 | MS.gene90123:intron |
| TTCAGAGAAAGAAGCATCAG+TGG | 0.623361 | 1.1:+81946676 | None:intergenic |
| AGGATTCAGGCCACTCTTTG+GGG | 0.627304 | 1.1:-81946364 | MS.gene90123:CDS |
| AGCGCCGCACGGAGACTCTG+TGG | 0.632423 | 1.1:+81946815 | None:intergenic |
| ACAATAAAGAAAGAGAAGCA+AGG | 0.638842 | 1.1:-81946384 | MS.gene90123:CDS |
| GCTGAGTAATGAGATATTAG+CGG | 0.642538 | 1.1:+81946628 | None:intergenic |
| TTGAGTATGTCAGCGCCGCA+CGG | 0.649413 | 1.1:+81946804 | None:intergenic |
| CCGAGCATTGAAGGTTGGCG+TGG | 0.649824 | 1.1:+81946309 | None:intergenic |
| GAGATGTTGTTTCAGGTGGG+CGG | 0.655381 | 1.1:-81946887 | MS.gene90123:CDS |
| CCTTTATCCATTGAGGACCA+CGG | 0.659737 | 1.1:+81945324 | None:intergenic |
| GCCGCCATCTCGAAGAACGT+CGG | 0.661635 | 1.1:+81946851 | None:intergenic |
| TATTAGCGGGTCTTCTACGG+AGG | 0.662840 | 1.1:+81946642 | None:intergenic |
| ACGCGCTTCTGCAAGCACAG+GGG | 0.679364 | 1.1:+81943845 | None:intergenic |
| CGTGAACGTGAGAGACTCCG+TGG | 0.737765 | 1.1:-81945341 | MS.gene90123:CDS |
| ATGGTGGTATCAGTCTGCTG+AGG | 0.754043 | 1.1:-81944221 | MS.gene90123:CDS |
| GCTTCCACAGAGTCTCCGTG+CGG | 0.792283 | 1.1:-81946819 | MS.gene90123:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTACAATTAATATTTTAT+GGG | - | chr1.1:81946568-81946587 | MS.gene90123:CDS | 10.0% |
| !! | AAGATAAATGTAAAGAAATA+AGG | + | chr1.1:81943958-81943977 | None:intergenic | 15.0% |
| !! | ATAGTAAACTAAGAATTAAA+CGG | + | chr1.1:81946792-81946811 | None:intergenic | 15.0% |
| !!! | AACTTTTAATATTATGGATA+AGG | + | chr1.1:81945823-81945842 | None:intergenic | 15.0% |
| !!! | ACTTTTAATATTATGGATAA+GGG | + | chr1.1:81945822-81945841 | None:intergenic | 15.0% |
| !!! | AGAAATTTTTGTATAATTCT+TGG | + | chr1.1:81945325-81945344 | None:intergenic | 15.0% |
| !!! | CTGTTACAATTAATATTTTA+TGG | - | chr1.1:81946567-81946586 | MS.gene90123:CDS | 15.0% |
| !! | AAACATTAATCCCTATTTAT+AGG | + | chr1.1:81945772-81945791 | None:intergenic | 20.0% |
| !! | AAATGAATCATATGATTCTA+CGG | - | chr1.1:81943811-81943830 | MS.gene90123:CDS | 20.0% |
| !! | AACTTGTAAAATAGAAAAAG+TGG | + | chr1.1:81946521-81946540 | None:intergenic | 20.0% |
| !! | AGTAATTCAAAAAATTGTGT+CGG | - | chr1.1:81946195-81946214 | MS.gene90123:intron | 20.0% |
| !! | AGTTGCTTCAATTATTTATT+TGG | + | chr1.1:81944664-81944683 | None:intergenic | 20.0% |
| !! | ATCAGTTATAAAACTCAAAA+TGG | + | chr1.1:81945389-81945408 | None:intergenic | 20.0% |
| !! | CGTAATCTAATAATTTATGA+AGG | + | chr1.1:81943396-81943415 | None:intergenic | 20.0% |
| !! | GTTGCTTCAATTATTTATTT+GGG | + | chr1.1:81944663-81944682 | None:intergenic | 20.0% |
| !! | TAAGATTATAAACTAATCCT+AGG | + | chr1.1:81945676-81945695 | None:intergenic | 20.0% |
| !! | TAAGCACTTATAAGTAAAAT+TGG | + | chr1.1:81943660-81943679 | None:intergenic | 20.0% |
| !! | TAGTAAACTAAGAATTAAAC+GGG | + | chr1.1:81946791-81946810 | None:intergenic | 20.0% |
| !! | TCTAATAATTTATGAAGGAA+AGG | + | chr1.1:81943391-81943410 | None:intergenic | 20.0% |
| !!! | ACACAATTTTTTGAATTACT+TGG | + | chr1.1:81946195-81946214 | None:intergenic | 20.0% |
| !!! | ATTTGAAATGATAACAACAA+TGG | + | chr1.1:81944300-81944319 | None:intergenic | 20.0% |
| !!! | CATAATTAAAAGCACATAAT+TGG | + | chr1.1:81945530-81945549 | None:intergenic | 20.0% |
| !!! | TGTTTTTCCTTTCAAAATTT+TGG | - | chr1.1:81944168-81944187 | MS.gene90123:CDS | 20.0% |
| ! | AAAAGATTTCAGAACATTGT+AGG | - | chr1.1:81943884-81943903 | MS.gene90123:CDS | 25.0% |
| ! | AAAATTTGTCTCTTTACCTT+TGG | + | chr1.1:81946001-81946020 | None:intergenic | 25.0% |
| ! | AACAATAATTGATACCAAAC+TGG | + | chr1.1:81945418-81945437 | None:intergenic | 25.0% |
| ! | AAGGTTTATCTGTAAAAGAT+TGG | - | chr1.1:81946709-81946728 | MS.gene90123:CDS | 25.0% |
| ! | AATGAAAGATATACTCATCA+AGG | + | chr1.1:81944866-81944885 | None:intergenic | 25.0% |
| ! | ACCTTAAAAAATCATCATGT+TGG | + | chr1.1:81943704-81943723 | None:intergenic | 25.0% |
| ! | ATAATCTTAGAGAATCTCTT+AGG | - | chr1.1:81945687-81945706 | MS.gene90123:intron | 25.0% |
| ! | ATATTGCGAGTATTCAATAA+AGG | + | chr1.1:81945301-81945320 | None:intergenic | 25.0% |
| ! | ATTGGATAAAGAGTTTCAAA+GGG | - | chr1.1:81946727-81946746 | MS.gene90123:CDS | 25.0% |
| ! | GATTGTTAAACTGAAGTTAT+TGG | - | chr1.1:81946487-81946506 | MS.gene90123:intron | 25.0% |
| ! | GATTTATTTACACTTTACCT+AGG | - | chr1.1:81945553-81945572 | MS.gene90123:intron | 25.0% |
| ! | TAACTTCAGTTTAACAATCA+AGG | + | chr1.1:81946486-81946505 | None:intergenic | 25.0% |
| ! | TAATCTGTAATTATTCTCCT+AGG | + | chr1.1:81945573-81945592 | None:intergenic | 25.0% |
| ! | TCATTATACTTGAACAATGT+GGG | - | chr1.1:81946667-81946686 | MS.gene90123:CDS | 25.0% |
| ! | TCTATGTATGCCTATAAATA+GGG | - | chr1.1:81945759-81945778 | MS.gene90123:intron | 25.0% |
| ! | TGCAAATGCTAATTTACAAA+AGG | + | chr1.1:81945091-81945110 | None:intergenic | 25.0% |
| ! | TTAACAATCAAGGCAAATAT+GGG | + | chr1.1:81946476-81946495 | None:intergenic | 25.0% |
| ! | TTATCTTGGTATCAAAATGA+AGG | + | chr1.1:81943981-81944000 | None:intergenic | 25.0% |
| ! | TTATTTAGCTACAATTTGAC+TGG | + | chr1.1:81944264-81944283 | None:intergenic | 25.0% |
| ! | TTCATTATACTTGAACAATG+TGG | - | chr1.1:81946666-81946685 | MS.gene90123:CDS | 25.0% |
| ! | TTTAACAATCAAGGCAAATA+TGG | + | chr1.1:81946477-81946496 | None:intergenic | 25.0% |
| !! | AACTAGTTTCTTCTTAATTC+AGG | + | chr1.1:81944896-81944915 | None:intergenic | 25.0% |
| !! | ACTAGTTTCTTCTTAATTCA+GGG | + | chr1.1:81944895-81944914 | None:intergenic | 25.0% |
| !! | CAAAGAACCAAAATTTTGAA+AGG | + | chr1.1:81944178-81944197 | None:intergenic | 25.0% |
| !! | GTTGTTGGATTTTAGATAAA+AGG | + | chr1.1:81945867-81945886 | None:intergenic | 25.0% |
| !! | TGGTTTGAAATAAGCTAAAA+GGG | + | chr1.1:81943640-81943659 | None:intergenic | 25.0% |
| !! | TTGGTTTGAAATAAGCTAAA+AGG | + | chr1.1:81943641-81943660 | None:intergenic | 25.0% |
| !!! | TATATTCAAGTTTGTTACTC+AGG | - | chr1.1:81946372-81946391 | MS.gene90123:CDS | 25.0% |
| !!! | TCCAACATGATGATTTTTTA+AGG | - | chr1.1:81943700-81943719 | MS.gene90123:intron | 25.0% |
| !!! | TGTTCTTCTTTAAAGTAAGA+TGG | - | chr1.1:81945250-81945269 | MS.gene90123:intron | 25.0% |
| AAGAATTAAACGGGAAAAAG+CGG | + | chr1.1:81946782-81946801 | None:intergenic | 30.0% | |
| AAGGATTGGGAACTAAATTA+GGG | + | chr1.1:81944487-81944506 | None:intergenic | 30.0% | |
| ACAATAAAGAAAGAGAAGCA+AGG | - | chr1.1:81943762-81943781 | MS.gene90123:intron | 30.0% | |
| ACCTTAACTGTGATGTTAAA+AGG | - | chr1.1:81946409-81946428 | MS.gene90123:CDS | 30.0% | |
| ACGATAATTGTTGAAGTTGT+TGG | + | chr1.1:81945882-81945901 | None:intergenic | 30.0% | |
| AGTAAATGTTTACCAGTTCT+TGG | + | chr1.1:81944134-81944153 | None:intergenic | 30.0% | |
| AGTATCTTCTGTAATTTCCT+AGG | - | chr1.1:81945656-81945675 | MS.gene90123:intron | 30.0% | |
| ATACCAGATGTTATACCTAT+TGG | - | chr1.1:81944044-81944063 | MS.gene90123:intron | 30.0% | |
| ATTACACATACAGATCTGTT+AGG | + | chr1.1:81946228-81946247 | None:intergenic | 30.0% | |
| CATAAAAGGTTTGAATCACA+CGG | + | chr1.1:81945036-81945055 | None:intergenic | 30.0% | |
| GAAATAAGCTAAAAGGGTTA+GGG | + | chr1.1:81943634-81943653 | None:intergenic | 30.0% | |
| GATTGGATAAAGAGTTTCAA+AGG | - | chr1.1:81946726-81946745 | MS.gene90123:CDS | 30.0% | |
| GTCTATGTATGCCTATAAAT+AGG | - | chr1.1:81945758-81945777 | MS.gene90123:intron | 30.0% | |
| TCTGTATGTGTAATTTGAAC+AGG | - | chr1.1:81946234-81946253 | MS.gene90123:CDS | 30.0% | |
| TGAAATAAGCTAAAAGGGTT+AGG | + | chr1.1:81943635-81943654 | None:intergenic | 30.0% | |
| TGGATGATTGACATTTATCT+TGG | + | chr1.1:81943995-81944014 | None:intergenic | 30.0% | |
| TGGTATATTTCTCAGATTGT+GGG | - | chr1.1:81944389-81944408 | MS.gene90123:intron | 30.0% | |
| TTGGTATATTTCTCAGATTG+TGG | - | chr1.1:81944388-81944407 | MS.gene90123:intron | 30.0% | |
| TTGTGATCCTATATAGATGA+TGG | - | chr1.1:81945901-81945920 | MS.gene90123:intron | 30.0% | |
| TTTCTTCTTAATTCAGGGAA+AGG | + | chr1.1:81944890-81944909 | None:intergenic | 30.0% | |
| ! | AAGATAAGTTCTAGTAATGC+AGG | + | chr1.1:81945013-81945032 | None:intergenic | 30.0% |
| ! | AGGGATTAATGTTTAGTCTT+TGG | - | chr1.1:81945778-81945797 | MS.gene90123:intron | 30.0% |
| ! | ATTAAAAGCACATAATTGGC+AGG | + | chr1.1:81945526-81945545 | None:intergenic | 30.0% |
| ! | GTGATTCAAACCTTTTATGT+CGG | - | chr1.1:81945037-81945056 | MS.gene90123:intron | 30.0% |
| ! | GTTGGATTTTAGATAAAAGG+AGG | + | chr1.1:81945864-81945883 | None:intergenic | 30.0% |
| ! | TCCTTTTAACATCACAGTTA+AGG | + | chr1.1:81946413-81946432 | None:intergenic | 30.0% |
| ! | TGATTCAAACCTTTTATGTC+GGG | - | chr1.1:81945038-81945057 | MS.gene90123:intron | 30.0% |
| !! | ATCCTATATAGATGATGGAA+TGG | - | chr1.1:81945906-81945925 | MS.gene90123:intron | 30.0% |
| !! | ATGGCATTTGAAGCAAATTT+TGG | + | chr1.1:81944519-81944538 | None:intergenic | 30.0% |
| ACGAACTAGATATGAGACAA+AGG | - | chr1.1:81946690-81946709 | MS.gene90123:CDS | 35.0% | |
| AGAATTAAACGGGAAAAAGC+GGG | + | chr1.1:81946781-81946800 | None:intergenic | 35.0% | |
| ATAACATCTGGTATGCGAAT+TGG | + | chr1.1:81944038-81944057 | None:intergenic | 35.0% | |
| ATACGATCACAAGTGATTCA+TGG | + | chr1.1:81945138-81945157 | None:intergenic | 35.0% | |
| ATGCAAACCTTTATCCATTG+AGG | + | chr1.1:81944832-81944851 | None:intergenic | 35.0% | |
| ATTCACTCACATTCACCAAT+AGG | + | chr1.1:81944360-81944379 | None:intergenic | 35.0% | |
| ATTTGTCTCTTTACCTTTGG+TGG | + | chr1.1:81945998-81946017 | None:intergenic | 35.0% | |
| CAATTTGACTGGAAGTCTAA+AGG | + | chr1.1:81944253-81944272 | None:intergenic | 35.0% | |
| CACCATTCCATCATCTATAT+AGG | + | chr1.1:81945911-81945930 | None:intergenic | 35.0% | |
| CATCCAATAGGTATAACATC+TGG | + | chr1.1:81944050-81944069 | None:intergenic | 35.0% | |
| CTGAGTAATGAGATATTAGC+GGG | + | chr1.1:81943520-81943539 | None:intergenic | 35.0% | |
| GAAGGATTGGGAACTAAATT+AGG | + | chr1.1:81944488-81944507 | None:intergenic | 35.0% | |
| GCTGAGTAATGAGATATTAG+CGG | + | chr1.1:81943521-81943540 | None:intergenic | 35.0% | |
| GTGTTAAAGCAGTTAATGAG+TGG | - | chr1.1:81944413-81944432 | MS.gene90123:intron | 35.0% | |
| TAACAGTATGAACTTCCCAA+CGG | + | chr1.1:81946553-81946572 | None:intergenic | 35.0% | |
| TAACTGATCAATGTCCAGTT+TGG | - | chr1.1:81945401-81945420 | MS.gene90123:intron | 35.0% | |
| TACGATCACAAGTGATTCAT+GGG | + | chr1.1:81945137-81945156 | None:intergenic | 35.0% | |
| TATACCTATTGGATGCTACT+GGG | - | chr1.1:81944055-81944074 | MS.gene90123:intron | 35.0% | |
| TATTGTTGCCAATAGAGTTG+TGG | - | chr1.1:81945431-81945450 | MS.gene90123:intron | 35.0% | |
| TCAGATAAATCAAACCACCA+AGG | + | chr1.1:81945482-81945501 | None:intergenic | 35.0% | |
| TCCATCTATCTTGACATGAA+AGG | + | chr1.1:81944754-81944773 | None:intergenic | 35.0% | |
| TCCATCTGTAATGACAGTTT+CGG | - | chr1.1:81946327-81946346 | MS.gene90123:CDS | 35.0% | |
| TCCTTTCATGTCAAGATAGA+TGG | - | chr1.1:81944750-81944769 | MS.gene90123:intron | 35.0% | |
| TCGGGCTATATAGGTTAAAA+TGG | - | chr1.1:81945056-81945075 | MS.gene90123:intron | 35.0% | |
| TCTTTCTCTGAATCCCTTTA+CGG | - | chr1.1:81943481-81943500 | MS.gene90123:intron | 35.0% | |
| TGATGCACTAAATCATAGAG+CGG | + | chr1.1:81946158-81946177 | None:intergenic | 35.0% | |
| TGTGAGTGAATCTGTTGTAT+TGG | - | chr1.1:81944369-81944388 | MS.gene90123:intron | 35.0% | |
| TTAGCAAACCACAACTCTAT+TGG | + | chr1.1:81945442-81945461 | None:intergenic | 35.0% | |
| TTATACCTATTGGATGCTAC+TGG | - | chr1.1:81944054-81944073 | MS.gene90123:intron | 35.0% | |
| ! | AGAGAAGAGAAAGAAGCTTT+TGG | + | chr1.1:81943597-81943616 | None:intergenic | 35.0% |
| ! | GCTTCTTTCTCTTCTCTTTT+TGG | - | chr1.1:81943600-81943619 | MS.gene90123:intron | 35.0% |
| !! | CAAATTTTGGTACTCTTGGA+AGG | + | chr1.1:81944506-81944525 | None:intergenic | 35.0% |
| !! | CTATATAGATGATGGAATGG+TGG | - | chr1.1:81945909-81945928 | MS.gene90123:intron | 35.0% |
| !! | GAAGCAAATTTTGGTACTCT+TGG | + | chr1.1:81944510-81944529 | None:intergenic | 35.0% |
| AAATCAAACCACCAAGGCAA+TGG | + | chr1.1:81945476-81945495 | None:intergenic | 40.0% | |
| AAGCCTGCATGTAAATGAAG+TGG | + | chr1.1:81944015-81944034 | None:intergenic | 40.0% | |
| ACGATCACAAGTGATTCATG+GGG | + | chr1.1:81945136-81945155 | None:intergenic | 40.0% | |
| AGAAAGAGAAGCAAGGATTC+AGG | - | chr1.1:81943769-81943788 | MS.gene90123:intron | 40.0% | |
| AGCCTTAAATTCCATTGCCT+TGG | - | chr1.1:81945462-81945481 | MS.gene90123:intron | 40.0% | |
| ATGCAGCTTCGATTTCAGAT+AGG | + | chr1.1:81943735-81943754 | None:intergenic | 40.0% | |
| ATGGAACTCATTCTCTTGTG+TGG | - | chr1.1:81944575-81944594 | MS.gene90123:intron | 40.0% | |
| CACCAAGGCAATGGAATTTA+AGG | + | chr1.1:81945467-81945486 | None:intergenic | 40.0% | |
| CAGTACCAGCATGTAACAAT+GGG | + | chr1.1:81943919-81943938 | None:intergenic | 40.0% | |
| CATCCACTTCATTTACATGC+AGG | - | chr1.1:81944009-81944028 | MS.gene90123:intron | 40.0% | |
| CCAGGGACTTATGATAGTTT+GGG | + | chr1.1:81944204-81944223 | None:intergenic | 40.0% | |
| CCATCTGTAATGACAGTTTC+GGG | - | chr1.1:81946328-81946347 | MS.gene90123:CDS | 40.0% | |
| CCATCTTCAACAAGTTGTCA+TGG | - | chr1.1:81944556-81944575 | MS.gene90123:intron | 40.0% | |
| CCTATATAGCCCGACATAAA+AGG | + | chr1.1:81945050-81945069 | None:intergenic | 40.0% | |
| CTGCAACAGTTGATCAGATA+AGG | - | chr1.1:81946863-81946882 | MS.gene90123:CDS | 40.0% | |
| CTTAAATTCCATTGCCTTGG+TGG | - | chr1.1:81945465-81945484 | MS.gene90123:intron | 40.0% | |
| CTTATCTGATCAACTGTTGC+AGG | + | chr1.1:81946865-81946884 | None:intergenic | 40.0% | |
| TCAGTACCAGCATGTAACAA+TGG | + | chr1.1:81943920-81943939 | None:intergenic | 40.0% | |
| TGCAGCTTCGATTTCAGATA+GGG | + | chr1.1:81943734-81943753 | None:intergenic | 40.0% | |
| TGTTACCCATTGTTACATGC+TGG | - | chr1.1:81943911-81943930 | MS.gene90123:intron | 40.0% | |
| TTAGGGACAACTGCAAACAT+AGG | + | chr1.1:81944470-81944489 | None:intergenic | 40.0% | |
| TTCACAATGCAGACATTGCA+GGG | - | chr1.1:81945165-81945184 | MS.gene90123:intron | 40.0% | |
| TTCTAGTAATGCAGGTGCAA+TGG | + | chr1.1:81945005-81945024 | None:intergenic | 40.0% | |
| TTGAACAGGTTGCCAAAGAA+GGG | - | chr1.1:81946248-81946267 | MS.gene90123:CDS | 40.0% | |
| TTGGTACTCTTGGAAGGATT+GGG | + | chr1.1:81944500-81944519 | None:intergenic | 40.0% | |
| TTTCACAATGCAGACATTGC+AGG | - | chr1.1:81945164-81945183 | MS.gene90123:intron | 40.0% | |
| TTTGAACAGGTTGCCAAAGA+AGG | - | chr1.1:81946247-81946266 | MS.gene90123:CDS | 40.0% | |
| TTTGGTACTCTTGGAAGGAT+TGG | + | chr1.1:81944501-81944520 | None:intergenic | 40.0% | |
| ! | AGATATTAGCGGGTCTTCTA+CGG | + | chr1.1:81943510-81943529 | None:intergenic | 40.0% |
| ! | ATTTTCATCTCCCCAAAGAG+TGG | + | chr1.1:81943795-81943814 | None:intergenic | 40.0% |
| ! | CCTTTTATGTCGGGCTATAT+AGG | - | chr1.1:81945047-81945066 | MS.gene90123:intron | 40.0% |
| ! | CGCTACTCACTTCACTATTT+TGG | - | chr1.1:81946044-81946063 | MS.gene90123:CDS | 40.0% |
| ! | GCTGTTGTGTTATTGCCTAT+TGG | - | chr1.1:81944342-81944361 | MS.gene90123:intron | 40.0% |
| ! | TTGTTACATGCTGGTACTGA+AGG | - | chr1.1:81943920-81943939 | MS.gene90123:intron | 40.0% |
| ! | TTTTGTGATGCGTGTTGCAA+CGG | + | chr1.1:81943867-81943886 | None:intergenic | 40.0% |
| !! | CCATGACAACTTGTTGAAGA+TGG | + | chr1.1:81944559-81944578 | None:intergenic | 40.0% |
| !! | TTCAGAGAAAGAAGCATCAG+TGG | + | chr1.1:81943473-81943492 | None:intergenic | 40.0% |
| AACTATCATAAGTCCCTGGC+TGG | - | chr1.1:81944205-81944224 | MS.gene90123:CDS | 45.0% | |
| AAGGATTCAGGCCACTCTTT+GGG | - | chr1.1:81943781-81943800 | MS.gene90123:CDS | 45.0% | |
| ACAAGTTAGTGTAGAGCCGT+TGG | - | chr1.1:81946534-81946553 | MS.gene90123:intron | 45.0% | |
| ACTATCATAAGTCCCTGGCT+GGG | - | chr1.1:81944206-81944225 | MS.gene90123:CDS | 45.0% | |
| AGTACCCAGTAGCATCCAAT+AGG | + | chr1.1:81944062-81944081 | None:intergenic | 45.0% | |
| CAAGTTAGTGTAGAGCCGTT+GGG | - | chr1.1:81946535-81946554 | MS.gene90123:intron | 45.0% | |
| CCCAAACTATCATAAGTCCC+TGG | - | chr1.1:81944201-81944220 | MS.gene90123:CDS | 45.0% | |
| CCCGAAACTGTCATTACAGA+TGG | + | chr1.1:81946331-81946350 | None:intergenic | 45.0% | |
| CCTTTATCCATTGAGGACCA+CGG | + | chr1.1:81944825-81944844 | None:intergenic | 45.0% | |
| GCCAGGGACTTATGATAGTT+TGG | + | chr1.1:81944205-81944224 | None:intergenic | 45.0% | |
| GTACTTGACTATGCGCAAAC+CGG | - | chr1.1:81945213-81945232 | MS.gene90123:intron | 45.0% | |
| TGAACAGGTTGCCAAAGAAG+GGG | - | chr1.1:81946249-81946268 | MS.gene90123:CDS | 45.0% | |
| TGAGTAGCGATGAGAGATGT+GGG | + | chr1.1:81946033-81946052 | None:intergenic | 45.0% | |
| TGTCTCTTTACCTTTGGTGG+TGG | + | chr1.1:81945995-81946014 | None:intergenic | 45.0% | |
| ! | GAGAAAGAAGCTTTTGGCGT+CGG | + | chr1.1:81943591-81943610 | None:intergenic | 45.0% |
| ! | GGTCGTGGATTAAATGCTCA+TGG | + | chr1.1:81944538-81944557 | None:intergenic | 45.0% |
| !! | CAACTTGTTGAAGATGGTCG+TGG | + | chr1.1:81944553-81944572 | None:intergenic | 45.0% |
| !! | TTCCATTTTTCCTGCCCACT+GGG | - | chr1.1:81944940-81944959 | MS.gene90123:CDS | 45.0% |
| !! | TTTCCATTTTTCCTGCCCAC+TGG | - | chr1.1:81944939-81944958 | MS.gene90123:CDS | 45.0% |
| !!! | AATAATAACTTTTAATATTA+TGG | + | chr1.1:81945829-81945848 | None:intergenic | 5.0% |
| AGGATTCAGGCCACTCTTTG+GGG | - | chr1.1:81943782-81943801 | MS.gene90123:CDS | 50.0% | |
| ATGGTGGTATCAGTCTGCTG+AGG | - | chr1.1:81945925-81945944 | MS.gene90123:intron | 50.0% | |
| ATTCATGTCTGCCGAGCTAC+TGG | - | chr1.1:81944108-81944127 | MS.gene90123:intron | 50.0% | |
| CAAGGATTCAGGCCACTCTT+TGG | - | chr1.1:81943780-81943799 | MS.gene90123:CDS | 50.0% | |
| CCGTGGTCCTCAATGGATAA+AGG | - | chr1.1:81944822-81944841 | MS.gene90123:intron | 50.0% | |
| CGGTAACTGTACCCCTTCTT+TGG | + | chr1.1:81946263-81946282 | None:intergenic | 50.0% | |
| GAACACTGCTGCAATCAAGC+CGG | + | chr1.1:81945235-81945254 | None:intergenic | 50.0% | |
| GAGTAGCGATGAGAGATGTG+GGG | + | chr1.1:81946032-81946051 | None:intergenic | 50.0% | |
| GGCAGTTGTGCTTGACAAAC+TGG | - | chr1.1:81944596-81944615 | MS.gene90123:intron | 50.0% | |
| GGGAGAGGCTTACATCAACA+CGG | - | chr1.1:81944966-81944985 | MS.gene90123:CDS | 50.0% | |
| GTGAGTAGCGATGAGAGATG+TGG | + | chr1.1:81946034-81946053 | None:intergenic | 50.0% | |
| TAAACGGGAAAAAGCGGGAG+TGG | + | chr1.1:81946776-81946795 | None:intergenic | 50.0% | |
| TCTTCTACGGAGGCCGTAAA+GGG | + | chr1.1:81943497-81943516 | None:intergenic | 50.0% | |
| ! | TATTAGCGGGTCTTCTACGG+AGG | + | chr1.1:81943507-81943526 | None:intergenic | 50.0% |
| !! | CTCTTTACCTTTGGTGGTGG+AGG | + | chr1.1:81945992-81946011 | None:intergenic | 50.0% |
| !! | TCCATTTTTCCTGCCCACTG+GGG | - | chr1.1:81944941-81944960 | MS.gene90123:CDS | 50.0% |
| !! | TTTACCTTTGGTGGTGGAGG+AGG | + | chr1.1:81945989-81946008 | None:intergenic | 50.0% |
| AGAGACTCCGTGGTCCTCAA+TGG | - | chr1.1:81944815-81944834 | MS.gene90123:intron | 55.0% | |
| CACGCCAACCTTCAATGCTC+GGG | - | chr1.1:81943838-81943857 | MS.gene90123:CDS | 55.0% | |
| CACGGAGTCTCTCACGTTCA+CGG | + | chr1.1:81944807-81944826 | None:intergenic | 55.0% | |
| CCACGCCAACCTTCAATGCT+CGG | - | chr1.1:81943837-81943856 | MS.gene90123:CDS | 55.0% | |
| CCAGTTCTTGGCCAGTAGCT+CGG | + | chr1.1:81944122-81944141 | None:intergenic | 55.0% | |
| GGGCAGATCGTTCTGTCTGA+CGG | + | chr1.1:81946283-81946302 | None:intergenic | 55.0% | |
| GGGGGAGGAGGATATACAGT+TGG | + | chr1.1:81945965-81945984 | None:intergenic | 55.0% | |
| GTCTTCTACGGAGGCCGTAA+AGG | + | chr1.1:81943498-81943517 | None:intergenic | 55.0% | |
| TACGCGCTTCTGCAAGCACA+GGG | + | chr1.1:81946305-81946324 | None:intergenic | 55.0% | |
| TGTGATGCGTGTTGCAACGG+AGG | + | chr1.1:81943864-81943883 | None:intergenic | 55.0% | |
| TTACGCGCTTCTGCAAGCAC+AGG | + | chr1.1:81946306-81946325 | None:intergenic | 55.0% | |
| TTGAGTATGTCAGCGCCGCA+CGG | + | chr1.1:81943345-81943364 | None:intergenic | 55.0% | |
| TTGCAGGCACCATCGTTGCT+GGG | + | chr1.1:81946849-81946868 | None:intergenic | 55.0% | |
| ! | TTGTTTCAGGTGGGCGGACA+AGG | - | chr1.1:81943265-81943284 | MS.gene90123:CDS | 55.0% |
| !! | GCGGCGCTGACATACTCAAT+CGG | - | chr1.1:81943346-81943365 | MS.gene90123:intron | 55.0% |
| ACGCGCTTCTGCAAGCACAG+GGG | + | chr1.1:81946304-81946323 | None:intergenic | 60.0% | |
| ACGGGAAAAAGCGGGAGTGG+AGG | + | chr1.1:81946773-81946792 | None:intergenic | 60.0% | |
| AGGTGGGCGGACAAGGAAGT+CGG | - | chr1.1:81943272-81943291 | MS.gene90123:CDS | 60.0% | |
| CACTAGCGCTGCACGCACTT+GGG | - | chr1.1:81944085-81944104 | MS.gene90123:intron | 60.0% | |
| CCGAGCTACTGGCCAAGAAC+TGG | - | chr1.1:81944119-81944138 | MS.gene90123:intron | 60.0% | |
| CGGGAAAAAGCGGGAGTGGA+GGG | + | chr1.1:81946772-81946791 | None:intergenic | 60.0% | |
| CGTGAACGTGAGAGACTCCG+TGG | - | chr1.1:81944805-81944824 | MS.gene90123:intron | 60.0% | |
| GCCCCAGTGGGCAGGAAAAA+TGG | + | chr1.1:81944945-81944964 | None:intergenic | 60.0% | |
| GCCGACGTTCTTCGAGATGG+CGG | - | chr1.1:81943294-81943313 | MS.gene90123:CDS | 60.0% | |
| GCCGCCATCTCGAAGAACGT+CGG | + | chr1.1:81943298-81943317 | None:intergenic | 60.0% | |
| GCTTCCACAGAGTCTCCGTG+CGG | - | chr1.1:81943327-81943346 | MS.gene90123:intron | 60.0% | |
| GGGAAAAAGCGGGAGTGGAG+GGG | + | chr1.1:81946771-81946790 | None:intergenic | 60.0% | |
| GTTGCAGGCACCATCGTTGC+TGG | + | chr1.1:81946850-81946869 | None:intergenic | 60.0% | |
| TCACTAGCGCTGCACGCACT+TGG | - | chr1.1:81944084-81944103 | MS.gene90123:intron | 60.0% | |
| TCGGCCGACGTTCTTCGAGA+TGG | - | chr1.1:81943291-81943310 | MS.gene90123:CDS | 60.0% | |
| TGCCAATGCATGCCCAGCCA+GGG | + | chr1.1:81944221-81944240 | None:intergenic | 60.0% | |
| TTGCCAATGCATGCCCAGCC+AGG | + | chr1.1:81944222-81944241 | None:intergenic | 60.0% | |
| ! | GACGTTCTTCGAGATGGCGG+CGG | - | chr1.1:81943297-81943316 | MS.gene90123:CDS | 60.0% |
| ! | TAAGCGCTGCCCAGCAACGA+TGG | - | chr1.1:81946837-81946856 | MS.gene90123:CDS | 60.0% |
| ! | TTTTCCTGCCCACTGGGGCA+GGG | - | chr1.1:81944946-81944965 | MS.gene90123:CDS | 60.0% |
| ! | TTTTTCCTGCCCACTGGGGC+AGG | - | chr1.1:81944945-81944964 | MS.gene90123:CDS | 60.0% |
| !! | AACGGAGGCCCGAGCATTGA+AGG | + | chr1.1:81943849-81943868 | None:intergenic | 60.0% |
| !! | ACCTTTGGTGGTGGAGGAGG+AGG | + | chr1.1:81945986-81946005 | None:intergenic | 60.0% |
| !! | CCGAGCATTGAAGGTTGGCG+TGG | + | chr1.1:81943840-81943859 | None:intergenic | 60.0% |
| !! | CCTTTGGTGGTGGAGGAGGA+GGG | + | chr1.1:81945985-81946004 | None:intergenic | 60.0% |
| !! | CTTTGGTGGTGGAGGAGGAG+GGG | + | chr1.1:81945984-81946003 | None:intergenic | 60.0% |
| !! | GAGGCCCGAGCATTGAAGGT+TGG | + | chr1.1:81943845-81943864 | None:intergenic | 60.0% |
| !! | TTTGGTGGTGGAGGAGGAGG+GGG | + | chr1.1:81945983-81946002 | None:intergenic | 60.0% |
| AAGCCTCTCCCTGCCCCAGT+GGG | + | chr1.1:81944957-81944976 | None:intergenic | 65.0% | |
| CCCTCCTCCTCCACCACCAA+AGG | - | chr1.1:81945982-81946001 | MS.gene90123:intron | 65.0% | |
| CGCGCTTCTGCAAGCACAGG+GGG | + | chr1.1:81946303-81946322 | None:intergenic | 65.0% | |
| GTCCCTGGCTGGGCATGCAT+TGG | - | chr1.1:81944216-81944235 | MS.gene90123:CDS | 65.0% | |
| TAAGCCTCTCCCTGCCCCAG+TGG | + | chr1.1:81944958-81944977 | None:intergenic | 65.0% | |
| AGCGCCGCACGGAGACTCTG+TGG | + | chr1.1:81943334-81943353 | None:intergenic | 70.0% | |
| CTCTCCCTGCCCCAGTGGGC+AGG | + | chr1.1:81944953-81944972 | None:intergenic | 75.0% | |
| CTGCCCACTGGGGCAGGGAG+AGG | - | chr1.1:81944951-81944970 | MS.gene90123:CDS | 75.0% | |
| GGTGGAGGAGGAGGGGGAGG+AGG | + | chr1.1:81945977-81945996 | None:intergenic | 75.0% | |
| !! | GGTGGTGGAGGAGGAGGGGG+AGG | + | chr1.1:81945980-81945999 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 81943262 | 81946906 | 81943262 | ID=MS.gene90123 |
| chr1.1 | mRNA | 81943262 | 81946906 | 81943262 | ID=MS.gene90123.t1;Parent=MS.gene90123 |
| chr1.1 | exon | 81946547 | 81946906 | 81946547 | ID=MS.gene90123.t1.exon1;Parent=MS.gene90123.t1 |
| chr1.1 | CDS | 81946547 | 81946906 | 81946547 | ID=cds.MS.gene90123.t1;Parent=MS.gene90123.t1 |
| chr1.1 | exon | 81946227 | 81946446 | 81946227 | ID=MS.gene90123.t1.exon2;Parent=MS.gene90123.t1 |
| chr1.1 | CDS | 81946227 | 81946446 | 81946227 | ID=cds.MS.gene90123.t1;Parent=MS.gene90123.t1 |
| chr1.1 | exon | 81946028 | 81946137 | 81946028 | ID=MS.gene90123.t1.exon3;Parent=MS.gene90123.t1 |
| chr1.1 | CDS | 81946028 | 81946137 | 81946028 | ID=cds.MS.gene90123.t1;Parent=MS.gene90123.t1 |
| chr1.1 | exon | 81945325 | 81945399 | 81945325 | ID=MS.gene90123.t1.exon4;Parent=MS.gene90123.t1 |
| chr1.1 | CDS | 81945325 | 81945399 | 81945325 | ID=cds.MS.gene90123.t1;Parent=MS.gene90123.t1 |
| chr1.1 | exon | 81944905 | 81944991 | 81944905 | ID=MS.gene90123.t1.exon5;Parent=MS.gene90123.t1 |
| chr1.1 | CDS | 81944905 | 81944991 | 81944905 | ID=cds.MS.gene90123.t1;Parent=MS.gene90123.t1 |
| chr1.1 | exon | 81944165 | 81944251 | 81944165 | ID=MS.gene90123.t1.exon6;Parent=MS.gene90123.t1 |
| chr1.1 | CDS | 81944165 | 81944251 | 81944165 | ID=cds.MS.gene90123.t1;Parent=MS.gene90123.t1 |
| chr1.1 | exon | 81943775 | 81943912 | 81943775 | ID=MS.gene90123.t1.exon7;Parent=MS.gene90123.t1 |
| chr1.1 | CDS | 81943775 | 81943912 | 81943775 | ID=cds.MS.gene90123.t1;Parent=MS.gene90123.t1 |
| chr1.1 | exon | 81943262 | 81943333 | 81943262 | ID=MS.gene90123.t1.exon8;Parent=MS.gene90123.t1 |
| chr1.1 | CDS | 81943262 | 81943333 | 81943262 | ID=cds.MS.gene90123.t1;Parent=MS.gene90123.t1 |
| Gene Sequence |
| Protein sequence |
