Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91354.t1 | XP_013469944.1 | 98.8 | 342 | 4 | 0 | 1 | 342 | 1 | 342 | 1.50E-190 | 675.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91354.t1 | Q9SUG3 | 71.6 | 342 | 93 | 2 | 3 | 342 | 11 | 350 | 5.1e-134 | 478.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91354.t1 | A0A072VQB8 | 98.8 | 342 | 4 | 0 | 1 | 342 | 1 | 342 | 1.1e-190 | 675.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049993 | MS.gene91354 | 0.8048 | 1.82E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene91354 | 0.811283 | 7.56E-51 | -1.69E-46 |
| MS.gene054559 | MS.gene91354 | 0.807336 | 5.31E-50 | -1.69E-46 |
| MS.gene061114 | MS.gene91354 | -0.824687 | 7.05E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91354.t1 | MTR_1g105930 | 98.830 | 342 | 4 | 0 | 1 | 342 | 1 | 342 | 0.0 | 688 |
| MS.gene91354.t1 | MTR_1g105930 | 98.400 | 250 | 4 | 0 | 93 | 342 | 63 | 312 | 0.0 | 509 |
| MS.gene91354.t1 | MTR_5g005370 | 80.719 | 306 | 59 | 0 | 30 | 335 | 11 | 316 | 5.58e-175 | 488 |
| MS.gene91354.t1 | MTR_5g005370 | 80.456 | 307 | 60 | 0 | 30 | 336 | 11 | 317 | 4.77e-174 | 488 |
| MS.gene91354.t1 | MTR_5g005370 | 77.778 | 306 | 57 | 1 | 30 | 335 | 11 | 305 | 1.84e-164 | 461 |
| MS.gene91354.t1 | MTR_5g005370 | 80.142 | 282 | 56 | 0 | 54 | 335 | 7 | 288 | 2.58e-158 | 445 |
| MS.gene91354.t1 | MTR_5g005370 | 80.357 | 280 | 55 | 0 | 56 | 335 | 2 | 281 | 2.16e-157 | 442 |
| MS.gene91354.t1 | MTR_8g066720 | 43.827 | 324 | 160 | 7 | 32 | 340 | 8 | 324 | 1.22e-87 | 269 |
| MS.gene91354.t1 | MTR_4g105690 | 43.648 | 307 | 164 | 4 | 33 | 333 | 10 | 313 | 3.58e-85 | 260 |
| MS.gene91354.t1 | MTR_3g067725 | 27.586 | 319 | 201 | 12 | 26 | 319 | 155 | 468 | 6.38e-21 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91354.t1 | AT4G08170 | 71.221 | 344 | 95 | 2 | 1 | 342 | 9 | 350 | 2.78e-167 | 470 |
| MS.gene91354.t1 | AT4G33770 | 68.710 | 310 | 95 | 1 | 30 | 339 | 80 | 387 | 3.74e-148 | 423 |
| MS.gene91354.t1 | AT4G33770 | 66.780 | 295 | 92 | 2 | 45 | 339 | 6 | 294 | 1.32e-135 | 387 |
| MS.gene91354.t1 | AT4G08170 | 76.062 | 259 | 60 | 1 | 84 | 342 | 6 | 262 | 2.76e-135 | 385 |
| MS.gene91354.t1 | AT4G08170 | 76.682 | 223 | 50 | 1 | 120 | 342 | 1 | 221 | 1.86e-113 | 328 |
| MS.gene91354.t1 | AT4G08170 | 76.682 | 223 | 50 | 1 | 120 | 342 | 1 | 221 | 1.86e-113 | 328 |
| MS.gene91354.t1 | AT4G08170 | 76.682 | 223 | 50 | 1 | 120 | 342 | 1 | 221 | 1.86e-113 | 328 |
| MS.gene91354.t1 | AT4G08170 | 76.682 | 223 | 50 | 1 | 120 | 342 | 1 | 221 | 1.86e-113 | 328 |
| MS.gene91354.t1 | AT4G08170 | 76.682 | 223 | 50 | 1 | 120 | 342 | 1 | 221 | 1.86e-113 | 328 |
| MS.gene91354.t1 | AT4G33770 | 66.364 | 220 | 72 | 1 | 120 | 339 | 1 | 218 | 1.26e-94 | 281 |
| MS.gene91354.t1 | AT5G16760 | 44.089 | 313 | 166 | 4 | 29 | 335 | 7 | 316 | 8.94e-86 | 261 |
| MS.gene91354.t1 | AT2G43980 | 28.736 | 174 | 118 | 4 | 149 | 319 | 295 | 465 | 1.72e-15 | 77.8 |
Find 64 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTACACTTGTTCTGCTTT+AGG | 0.209814 | 1.3:+72439979 | None:intergenic |
| TTTCATTATTGAAGGATTTC+AGG | 0.217122 | 1.3:-72441910 | MS.gene91354:intron |
| GTAGATATGATTCGTGAATA+TGG | 0.249264 | 1.3:-72440190 | MS.gene91354:CDS |
| ATTGATATCAATTACTTTCC+TGG | 0.288993 | 1.3:-72440145 | MS.gene91354:intron |
| CTTGCAAGAGAAATGAAATT+TGG | 0.289856 | 1.3:+72444400 | None:intergenic |
| TCTTTAAGATTTATATTGTT+GGG | 0.323070 | 1.3:-72440600 | MS.gene91354:CDS |
| TATTGTTGGGGAATACATAA+AGG | 0.342629 | 1.3:-72440587 | MS.gene91354:CDS |
| CTCTTTAAGATTTATATTGT+TGG | 0.359704 | 1.3:-72440601 | MS.gene91354:CDS |
| ACACCCACCAAGACCTTTGT+TGG | 0.369643 | 1.3:-72440350 | MS.gene91354:CDS |
| CCAGCTTTGGTGACTTCATA+AGG | 0.370201 | 1.3:+72441441 | None:intergenic |
| AGCTCGCGTTTACTGATATT+AGG | 0.375570 | 1.3:+72440544 | None:intergenic |
| ATTTGACATTGTCTTGCATA+AGG | 0.382180 | 1.3:-72443044 | MS.gene91354:intron |
| CCTTATGAAGTCACCAAAGC+TGG | 0.387765 | 1.3:-72441441 | MS.gene91354:CDS |
| GGAATCTCACCGGCAATACT+AGG | 0.399683 | 1.3:+72440445 | None:intergenic |
| CGGCAACTTCAACCCAGCTT+TGG | 0.416268 | 1.3:+72441428 | None:intergenic |
| GATCTTGATCCTAGTATTGC+CGG | 0.427389 | 1.3:-72440454 | MS.gene91354:intron |
| CTACAAGAGTTTGTCAATCA+TGG | 0.430927 | 1.3:-72440726 | MS.gene91354:intron |
| TTCAGAGCTTGAACCTCCAC+TGG | 0.437347 | 1.3:-72440751 | MS.gene91354:CDS |
| GTAAAGACATGCTCGTAGTC+TGG | 0.437470 | 1.3:+72440017 | None:intergenic |
| ACTTCATAAGGAATAGTAGA+TGG | 0.444777 | 1.3:+72441453 | None:intergenic |
| AGCCTCTCCAACAAAGGTCT+TGG | 0.445162 | 1.3:+72440343 | None:intergenic |
| AAAAGAGCTTCGTCATAGAT+TGG | 0.446522 | 1.3:-72440317 | MS.gene91354:intron |
| TGGGTCAGAAAATTGTTGTT+GGG | 0.450840 | 1.3:-72444462 | MS.gene91354:CDS |
| CTCTCCAACAAAGGTCTTGG+TGG | 0.458592 | 1.3:+72440346 | None:intergenic |
| TTGGGTCAGAAAATTGTTGT+TGG | 0.460458 | 1.3:-72444463 | MS.gene91354:CDS |
| TAGATATGATTCGTGAATAT+GGG | 0.472467 | 1.3:-72440189 | MS.gene91354:CDS |
| GCTGCTGCACATGAAACTCT+TGG | 0.473192 | 1.3:+72440493 | None:intergenic |
| TGTAAATGTTGAATTGCATC+AGG | 0.481257 | 1.3:+72441854 | None:intergenic |
| CAAATTTCATTTCTCTTGCA+AGG | 0.481455 | 1.3:-72444399 | MS.gene91354:intron |
| CACATGAAACTCTTGGAAAA+CGG | 0.483083 | 1.3:+72440500 | None:intergenic |
| TTATGCAAGACAATGTCAAA+TGG | 0.500174 | 1.3:+72443046 | None:intergenic |
| CACCAAGACCTTTGTTGGAG+AGG | 0.502650 | 1.3:-72440345 | MS.gene91354:CDS |
| GGATCGAGAACGAATACATC+GGG | 0.510442 | 1.3:+72441878 | None:intergenic |
| TTCAGTTGTTAGGCGAGGAA+TGG | 0.516509 | 1.3:-72442818 | MS.gene91354:intron |
| CCACATCTTGAAGCATGGAT+TGG | 0.521285 | 1.3:+72441825 | None:intergenic |
| CATCTTGAAGCATGGATTGG+CGG | 0.525990 | 1.3:+72441828 | None:intergenic |
| CTTTAAGATTTATATTGTTG+GGG | 0.527390 | 1.3:-72440599 | MS.gene91354:CDS |
| GCTGGGTTGAAGTTGCCGTT+AGG | 0.530540 | 1.3:-72441423 | MS.gene91354:intron |
| TTTGCAAGCCTCTCCAACAA+AGG | 0.530921 | 1.3:+72440337 | None:intergenic |
| ATCCACCACATCTTGAAGCA+TGG | 0.535346 | 1.3:+72441820 | None:intergenic |
| CCAATCCATGCTTCAAGATG+TGG | 0.557398 | 1.3:-72441825 | MS.gene91354:CDS |
| TATGTGTAATGCAGGAGCAA+GGG | 0.560921 | 1.3:-72443118 | MS.gene91354:intron |
| CTTATGAAGTCACCAAAGCT+GGG | 0.565266 | 1.3:-72441440 | MS.gene91354:CDS |
| TTATGTGTAATGCAGGAGCA+AGG | 0.565876 | 1.3:-72443119 | MS.gene91354:intron |
| AGTTGCAAAACCTCTAGTTG+TGG | 0.567026 | 1.3:-72440826 | MS.gene91354:CDS |
| ATCCATGCTTCAAGATGTGG+TGG | 0.574463 | 1.3:-72441822 | MS.gene91354:CDS |
| CGCGAGCTATCAAAAGTCGC+AGG | 0.584140 | 1.3:-72440529 | MS.gene91354:CDS |
| TCTCCAACAAAGGTCTTGGT+GGG | 0.597564 | 1.3:+72440347 | None:intergenic |
| GCACTGCCATCCACAACTAG+AGG | 0.603312 | 1.3:+72440816 | None:intergenic |
| AACAAGCCACTGTCAGAACA+AGG | 0.605835 | 1.3:-72443070 | MS.gene91354:CDS |
| ATGTGTAATGCAGGAGCAAG+GGG | 0.610801 | 1.3:-72443117 | MS.gene91354:intron |
| GCAAAACCTCTAGTTGTGGA+TGG | 0.613529 | 1.3:-72440822 | MS.gene91354:CDS |
| CTAAACTTATCTGAGTGCAA+TGG | 0.614593 | 1.3:-72441797 | MS.gene91354:intron |
| AGAAGTGATGGCGAAATCTG+AGG | 0.629932 | 1.3:-72444503 | MS.gene91354:CDS |
| AATGGACCTTGTTCTGACAG+TGG | 0.636759 | 1.3:+72443064 | None:intergenic |
| AACTCTTGTAGAACCAGTGG+AGG | 0.639928 | 1.3:+72440738 | None:intergenic |
| ACAAACTCTTGTAGAACCAG+TGG | 0.644820 | 1.3:+72440735 | None:intergenic |
| TTGTAATAACTAGCTGACGA+GGG | 0.649097 | 1.3:+72441487 | None:intergenic |
| GATTCGTGAATATGGGACGA+AGG | 0.655124 | 1.3:-72440182 | MS.gene91354:CDS |
| GGGAATACATAAAGGTTGTG+AGG | 0.657084 | 1.3:-72440579 | MS.gene91354:CDS |
| AGGATCGAGAACGAATACAT+CGG | 0.660038 | 1.3:+72441877 | None:intergenic |
| TTTGTAATAACTAGCTGACG+AGG | 0.667968 | 1.3:+72441486 | None:intergenic |
| AAATGTTGAATTGCATCAGG+AGG | 0.678092 | 1.3:+72441857 | None:intergenic |
| GGAATGGCGAGAGATCATTG+AGG | 0.697509 | 1.3:-72442802 | MS.gene91354:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATGTAATTACTAATT+AGG | - | chr1.3:72442498-72442517 | MS.gene91354:intron | 10.0% |
| !! | AAATATGTAATTACTAATTA+GGG | - | chr1.3:72442499-72442518 | MS.gene91354:intron | 10.0% |
| !!! | AATTAGTAATTACATATTTT+CGG | + | chr1.3:72442498-72442517 | None:intergenic | 10.0% |
| !!! | TCTGTTTTTTTTTTAAAAAA+AGG | - | chr1.3:72441546-72441565 | MS.gene91354:intron | 10.0% |
| !!! | TTTTTTAACTTTTTGTTTTA+CGG | - | chr1.3:72444434-72444453 | MS.gene91354:CDS | 10.0% |
| !! | AAATTTGAAAGGAAAAAAAA+AGG | + | chr1.3:72443655-72443674 | None:intergenic | 15.0% |
| !! | TATTGTAATTTATCTATTCA+TGG | + | chr1.3:72442432-72442451 | None:intergenic | 15.0% |
| !! | TTAAAAAAAGGTTTCATTTA+TGG | - | chr1.3:72441558-72441577 | MS.gene91354:intron | 15.0% |
| !! | TTAATCTAAATAATTTGGTT+AGG | - | chr1.3:72442024-72442043 | MS.gene91354:intron | 15.0% |
| !!! | AACTTAAGCTATATTTTTAT+CGG | - | chr1.3:72441246-72441265 | MS.gene91354:intron | 15.0% |
| !!! | TCTTTAAGATTTATATTGTT+GGG | - | chr1.3:72443903-72443922 | MS.gene91354:intron | 15.0% |
| !!! | TTAAAGTGATTTTTTTTTAG+TGG | - | chr1.3:72440209-72440228 | MS.gene91354:CDS | 15.0% |
| !!! | TTTGTTTTCCTTTTTTATTT+GGG | - | chr1.3:72443862-72443881 | MS.gene91354:intron | 15.0% |
| !!! | TTTTGTTTTCCTTTTTTATT+TGG | - | chr1.3:72443861-72443880 | MS.gene91354:intron | 15.0% |
| !! | AAAACATAAAAAGTAAAACG+TGG | + | chr1.3:72440191-72440210 | None:intergenic | 20.0% |
| !! | AAATCCTTCAATAATGAAAA+AGG | + | chr1.3:72442592-72442611 | None:intergenic | 20.0% |
| !! | AAATTATTAACACTTAACAG+TGG | - | chr1.3:72441199-72441218 | MS.gene91354:intron | 20.0% |
| !! | AAGAACAAAAAGAAAATCAT+TGG | + | chr1.3:72440148-72440167 | None:intergenic | 20.0% |
| !! | AATCCTTCAATAATGAAAAA+GGG | + | chr1.3:72442591-72442610 | None:intergenic | 20.0% |
| !! | AATCGTTAGTATTATTAGTT+TGG | - | chr1.3:72441829-72441848 | MS.gene91354:CDS | 20.0% |
| !! | ATCAAATTTCTTAAAGAACA+AGG | - | chr1.3:72442177-72442196 | MS.gene91354:intron | 20.0% |
| !! | CAACTTGAAAAAATGAAAAA+AGG | + | chr1.3:72442921-72442940 | None:intergenic | 20.0% |
| !! | CATTTGGTATATAACATTAT+TGG | + | chr1.3:72442233-72442252 | None:intergenic | 20.0% |
| !! | GTATATTATATACTAGCTAT+TGG | - | chr1.3:72443181-72443200 | MS.gene91354:intron | 20.0% |
| !! | TGTGGTTAATCTAAATAATT+TGG | - | chr1.3:72442019-72442038 | MS.gene91354:intron | 20.0% |
| !!! | AAACTCTGTTTTTCTTTTTT+TGG | - | chr1.3:72440321-72440340 | MS.gene91354:CDS | 20.0% |
| !!! | ATCGTTAGTATTATTAGTTT+GGG | - | chr1.3:72441830-72441849 | MS.gene91354:CDS | 20.0% |
| !!! | CTCTTTAAGATTTATATTGT+TGG | - | chr1.3:72443902-72443921 | MS.gene91354:intron | 20.0% |
| !!! | CTTTAAGATTTATATTGTTG+GGG | - | chr1.3:72443904-72443923 | MS.gene91354:intron | 20.0% |
| !!! | CTTTTTTCATTTTTTCAAGT+TGG | - | chr1.3:72442919-72442938 | MS.gene91354:intron | 20.0% |
| !!! | TAATTTTTTATGTGAATCAG+AGG | - | chr1.3:72440730-72440749 | MS.gene91354:CDS | 20.0% |
| !!! | TCAACTATTTTTGTACTTTT+TGG | - | chr1.3:72442878-72442897 | MS.gene91354:intron | 20.0% |
| !!! | TTCTTCTTTTATAACATTCA+TGG | - | chr1.3:72441796-72441815 | MS.gene91354:intron | 20.0% |
| ! | AAAACTTACATGACTTTACA+TGG | - | chr1.3:72440813-72440832 | MS.gene91354:CDS | 25.0% |
| ! | AAGAAAAACAGAGTTTACAA+TGG | + | chr1.3:72440317-72440336 | None:intergenic | 25.0% |
| ! | AATAATACATTAAGTACACG+AGG | - | chr1.3:72442331-72442350 | MS.gene91354:intron | 25.0% |
| ! | AGTTGAAATGTTTCATCTTA+TGG | + | chr1.3:72444110-72444129 | None:intergenic | 25.0% |
| ! | ATCCTTCAATAATGAAAAAG+GGG | + | chr1.3:72442590-72442609 | None:intergenic | 25.0% |
| ! | ATCTATAAAATAACCAGACA+CGG | + | chr1.3:72442259-72442278 | None:intergenic | 25.0% |
| ! | ATTGATATCAATTACTTTCC+TGG | - | chr1.3:72444358-72444377 | MS.gene91354:intron | 25.0% |
| ! | ATTGTTCATAAGAAAGATAC+CGG | - | chr1.3:72440664-72440683 | MS.gene91354:intron | 25.0% |
| ! | CAAATCAATATTGTCAACTA+TGG | + | chr1.3:72441112-72441131 | None:intergenic | 25.0% |
| ! | CTAAAAATTATGTGTAATGC+AGG | - | chr1.3:72441377-72441396 | MS.gene91354:intron | 25.0% |
| ! | CTAAATAGTAAACCAATCTT+TGG | + | chr1.3:72443515-72443534 | None:intergenic | 25.0% |
| ! | CTAGAATATATCTGGTTAAT+AGG | - | chr1.3:72443148-72443167 | MS.gene91354:intron | 25.0% |
| ! | TAAATAATTTGGTTAGGCAT+TGG | - | chr1.3:72442030-72442049 | MS.gene91354:intron | 25.0% |
| ! | TAGATATGATTCGTGAATAT+GGG | - | chr1.3:72444314-72444333 | MS.gene91354:intron | 25.0% |
| ! | TTTCATTATTGAAGGATTTC+AGG | - | chr1.3:72442593-72442612 | MS.gene91354:intron | 25.0% |
| ! | TTTGCAACTGAAAATTTGAA+AGG | + | chr1.3:72443666-72443685 | None:intergenic | 25.0% |
| !! | AAAAAGTCAAATTTCTGAAG+AGG | + | chr1.3:72442368-72442387 | None:intergenic | 25.0% |
| !! | ATAACAGTGTTGTTAAATAG+CGG | - | chr1.3:72443236-72443255 | MS.gene91354:intron | 25.0% |
| !! | ATTTGTTCTTTTCAGTTGTT+AGG | - | chr1.3:72441675-72441694 | MS.gene91354:intron | 25.0% |
| !! | CATAGTTGACAATATTGATT+TGG | - | chr1.3:72441110-72441129 | MS.gene91354:intron | 25.0% |
| !! | CTGCATTACACATAATTTTT+AGG | + | chr1.3:72441379-72441398 | None:intergenic | 25.0% |
| !! | TACAAGAAATCTAAAAGTGT+CGG | + | chr1.3:72440510-72440529 | None:intergenic | 25.0% |
| !! | TATAATTTGTCTTTGTGAGA+TGG | - | chr1.3:72440707-72440726 | MS.gene91354:intron | 25.0% |
| !! | TTCCTTGTAATTTTAAATCC+CGG | + | chr1.3:72440686-72440705 | None:intergenic | 25.0% |
| !! | TTGACAACATTTTGTACAAA+TGG | + | chr1.3:72443320-72443339 | None:intergenic | 25.0% |
| !!! | AAGTGATTTTTTTTTAGTGG+TGG | - | chr1.3:72440212-72440231 | MS.gene91354:intron | 25.0% |
| !!! | AATATTGATTTGGATAGTCA+AGG | - | chr1.3:72441120-72441139 | MS.gene91354:intron | 25.0% |
| !!! | AGTGATTTTTTTTTAGTGGT+GGG | - | chr1.3:72440213-72440232 | MS.gene91354:intron | 25.0% |
| !!! | ATTTTTATCGGTTCAATGTT+TGG | - | chr1.3:72441258-72441277 | MS.gene91354:intron | 25.0% |
| !!! | CTTAACTACTGTTGTTTTAT+AGG | - | chr1.3:72442981-72443000 | MS.gene91354:intron | 25.0% |
| !!! | CTTTTGTTGTTACTTTTTGT+CGG | - | chr1.3:72440346-72440365 | MS.gene91354:CDS | 25.0% |
| !!! | TTGTTTTATTAGCCAAAGAT+TGG | - | chr1.3:72443500-72443519 | MS.gene91354:intron | 25.0% |
| AATAACACACAGAATGATTG+CGG | + | chr1.3:72443823-72443842 | None:intergenic | 30.0% | |
| AATCAAAGATACACACCTAA+CGG | + | chr1.3:72443098-72443117 | None:intergenic | 30.0% | |
| AATCTTCTGATTATCCTGAT+TGG | - | chr1.3:72443568-72443587 | MS.gene91354:intron | 30.0% | |
| AATTTCTTAAAGAACAAGGC+TGG | - | chr1.3:72442181-72442200 | MS.gene91354:intron | 30.0% | |
| ACAGACAATAATTCGTTCTT+TGG | + | chr1.3:72442069-72442088 | None:intergenic | 30.0% | |
| ACTATCACAATAATATGGCA+TGG | - | chr1.3:72442152-72442171 | MS.gene91354:intron | 30.0% | |
| ACTTCATAAGGAATAGTAGA+TGG | + | chr1.3:72443053-72443072 | None:intergenic | 30.0% | |
| ACTTGTTTGAATACTTGGTT+TGG | + | chr1.3:72441986-72442005 | None:intergenic | 30.0% | |
| AGATATAATGAAAGCTGCAT+CGG | - | chr1.3:72442279-72442298 | MS.gene91354:intron | 30.0% | |
| ATATCCGAATGATACAAACA+AGG | + | chr1.3:72443468-72443487 | None:intergenic | 30.0% | |
| ATCTATTCATGGAACTATTC+AGG | + | chr1.3:72442421-72442440 | None:intergenic | 30.0% | |
| ATCTTCTGATTATCCTGATT+GGG | - | chr1.3:72443569-72443588 | MS.gene91354:intron | 30.0% | |
| ATTTGACATTGTCTTGCATA+AGG | - | chr1.3:72441459-72441478 | MS.gene91354:CDS | 30.0% | |
| CAAAATTTATGCTCAACCTT+TGG | - | chr1.3:72440603-72440622 | MS.gene91354:CDS | 30.0% | |
| CAAATTTCATTTCTCTTGCA+AGG | - | chr1.3:72440104-72440123 | MS.gene91354:intron | 30.0% | |
| CAGACAATAATTCGTTCTTT+GGG | + | chr1.3:72442068-72442087 | None:intergenic | 30.0% | |
| CCATCAAAATACAAACTTCA+TGG | + | chr1.3:72442549-72442568 | None:intergenic | 30.0% | |
| CTTGCAAGAGAAATGAAATT+TGG | + | chr1.3:72440106-72440125 | None:intergenic | 30.0% | |
| CTTGTTTGAATACTTGGTTT+GGG | + | chr1.3:72441985-72442004 | None:intergenic | 30.0% | |
| GCTATGAATATTTGGAAGAA+AGG | + | chr1.3:72442472-72442491 | None:intergenic | 30.0% | |
| GTACAATCCTAAAACTTTCA+GGG | + | chr1.3:72442787-72442806 | None:intergenic | 30.0% | |
| GTAGATATGATTCGTGAATA+TGG | - | chr1.3:72444313-72444332 | MS.gene91354:intron | 30.0% | |
| TACAAACTTCATGGAGAATT+TGG | + | chr1.3:72442540-72442559 | None:intergenic | 30.0% | |
| TACAAGTACAATGTGAAAGT+AGG | + | chr1.3:72441750-72441769 | None:intergenic | 30.0% | |
| TACAATCCTAAAACTTTCAG+GGG | + | chr1.3:72442786-72442805 | None:intergenic | 30.0% | |
| TAGCGACTATCACAATAATA+TGG | - | chr1.3:72442147-72442166 | MS.gene91354:intron | 30.0% | |
| TATAACTTATCTGCATTCCA+TGG | - | chr1.3:72444385-72444404 | MS.gene91354:intron | 30.0% | |
| TATTGTTGGGGAATACATAA+AGG | - | chr1.3:72443916-72443935 | MS.gene91354:intron | 30.0% | |
| TCTCTAGACTAGAATATATC+TGG | - | chr1.3:72443140-72443159 | MS.gene91354:intron | 30.0% | |
| TGAAATGTTTCATCTTATGG+TGG | + | chr1.3:72444107-72444126 | None:intergenic | 30.0% | |
| TGCAATGTCCCAAATAAAAA+AGG | + | chr1.3:72443873-72443892 | None:intergenic | 30.0% | |
| TGTAAATGTTGAATTGCATC+AGG | + | chr1.3:72442652-72442671 | None:intergenic | 30.0% | |
| TGTACAATCCTAAAACTTTC+AGG | + | chr1.3:72442788-72442807 | None:intergenic | 30.0% | |
| TTATGCAAGACAATGTCAAA+TGG | + | chr1.3:72441460-72441479 | None:intergenic | 30.0% | |
| TTCTTGTAAACATACCAAAC+TGG | - | chr1.3:72440522-72440541 | MS.gene91354:CDS | 30.0% | |
| TTGTTCATAAGAAAGATACC+GGG | - | chr1.3:72440665-72440684 | MS.gene91354:intron | 30.0% | |
| ! | ACAATTTTCTGACCCAAAAA+CGG | + | chr1.3:72440037-72440056 | None:intergenic | 30.0% |
| ! | ACGAATTATTGTCTGTCTTT+TGG | - | chr1.3:72442073-72442092 | MS.gene91354:intron | 30.0% |
| ! | AGAACCTTGTTTGTATCATT+CGG | - | chr1.3:72443461-72443480 | MS.gene91354:intron | 30.0% |
| ! | ATATCAAACAAGAGCACAAA+AGG | + | chr1.3:72441152-72441171 | None:intergenic | 30.0% |
| ! | ATATTGTCAACTATGGATTG+CGG | + | chr1.3:72441105-72441124 | None:intergenic | 30.0% |
| ! | ATATTTGAAACAACCCAATC+AGG | + | chr1.3:72443585-72443604 | None:intergenic | 30.0% |
| ! | CAAAGGTTGAGCATAAATTT+TGG | + | chr1.3:72440605-72440624 | None:intergenic | 30.0% |
| ! | TACCGGGATTTAAAATTACA+AGG | - | chr1.3:72440681-72440700 | MS.gene91354:intron | 30.0% |
| ! | TTGACTCTTGATCTTTTGAT+TGG | - | chr1.3:72440870-72440889 | MS.gene91354:intron | 30.0% |
| ! | TTGTTTGAATACTTGGTTTG+GGG | + | chr1.3:72441984-72442003 | None:intergenic | 30.0% |
| !! | CACATAATTTTTAGGCATTC+AGG | + | chr1.3:72441371-72441390 | None:intergenic | 30.0% |
| !! | CCATGAAGTTTGTATTTTGA+TGG | - | chr1.3:72442546-72442565 | MS.gene91354:intron | 30.0% |
| !! | GGTAATCTTGTTATTGTCTT+TGG | - | chr1.3:72440555-72440574 | MS.gene91354:CDS | 30.0% |
| !! | TACATGGTTCAAAGTTTTGA+TGG | - | chr1.3:72441328-72441347 | MS.gene91354:intron | 30.0% |
| !! | TTATGGTTTTGCTGAATTTG+TGG | - | chr1.3:72441575-72441594 | MS.gene91354:intron | 30.0% |
| !! | TTCCCCTTTTTCATTATTGA+AGG | - | chr1.3:72442585-72442604 | MS.gene91354:intron | 30.0% |
| !!! | GAATTTTTTTGGAATCTCAC+CGG | + | chr1.3:72444071-72444090 | None:intergenic | 30.0% |
| !!! | GTGATTTTTTTTTAGTGGTG+GGG | - | chr1.3:72440214-72440233 | MS.gene91354:intron | 30.0% |
| !!! | TTTTTTATTTGGGACATTGC+AGG | - | chr1.3:72443872-72443891 | MS.gene91354:intron | 30.0% |
| AAAACCTTGTCGCTAAATGA+GGG | + | chr1.3:72440944-72440963 | None:intergenic | 35.0% | |
| AAAAGAGCTTCGTCATAGAT+TGG | - | chr1.3:72444186-72444205 | MS.gene91354:intron | 35.0% | |
| AAATGTTGAATTGCATCAGG+AGG | + | chr1.3:72442649-72442668 | None:intergenic | 35.0% | |
| AATGTTTCATCTTATGGTGG+TGG | + | chr1.3:72444104-72444123 | None:intergenic | 35.0% | |
| ACCAAGTATTCAAACAAGTG+AGG | - | chr1.3:72441987-72442006 | MS.gene91354:intron | 35.0% | |
| CACATGAAACTCTTGGAAAA+CGG | + | chr1.3:72444006-72444025 | None:intergenic | 35.0% | |
| CTAAACTTATCTGAGTGCAA+TGG | - | chr1.3:72442706-72442725 | MS.gene91354:intron | 35.0% | |
| CTACAAGAGTTTGTCAATCA+TGG | - | chr1.3:72443777-72443796 | MS.gene91354:intron | 35.0% | |
| CTGTGTAGTGTATTATTTGC+TGG | - | chr1.3:72440267-72440286 | MS.gene91354:intron | 35.0% | |
| GCAGATAAGTTATACTTACC+AGG | + | chr1.3:72444379-72444398 | None:intergenic | 35.0% | |
| GTATTAGTAAATCATCGCCT+AGG | + | chr1.3:72444253-72444272 | None:intergenic | 35.0% | |
| TACCAAGAAACAAACCAGTT+TGG | + | chr1.3:72440539-72440558 | None:intergenic | 35.0% | |
| TATTCATGGAACTATTCAGG+AGG | + | chr1.3:72442418-72442437 | None:intergenic | 35.0% | |
| TCCTCACTTGTTTGAATACT+TGG | + | chr1.3:72441991-72442010 | None:intergenic | 35.0% | |
| TCTATGCAAGAATGCTATAG+AGG | + | chr1.3:72441059-72441078 | None:intergenic | 35.0% | |
| TCTGATCATGATTCATGATG+AGG | + | chr1.3:72441946-72441965 | None:intergenic | 35.0% | |
| TCTTACACTTGTTCTGCTTT+AGG | + | chr1.3:72444527-72444546 | None:intergenic | 35.0% | |
| TGCAACCATATTTCTTTCCT+AGG | - | chr1.3:72444233-72444252 | MS.gene91354:intron | 35.0% | |
| TTCGGTGAGCTATGAATATT+TGG | + | chr1.3:72442480-72442499 | None:intergenic | 35.0% | |
| TTGAACCATGTATTCAACCA+AGG | + | chr1.3:72441320-72441339 | None:intergenic | 35.0% | |
| TTGAGCTACAGACATTACAT+CGG | + | chr1.3:72440459-72440478 | None:intergenic | 35.0% | |
| TTGATTTCTGTCATAGACCA+TGG | + | chr1.3:72444405-72444424 | None:intergenic | 35.0% | |
| TTGGGTCAGAAAATTGTTGT+TGG | - | chr1.3:72440040-72440059 | MS.gene91354:intron | 35.0% | |
| TTGTAATAACTAGCTGACGA+GGG | + | chr1.3:72443019-72443038 | None:intergenic | 35.0% | |
| TTGTCAAATAGCAGCTATAG+CGG | - | chr1.3:72443333-72443352 | MS.gene91354:intron | 35.0% | |
| TTTGTAATAACTAGCTGACG+AGG | + | chr1.3:72443020-72443039 | None:intergenic | 35.0% | |
| TTTGTACAAATGGCATATCG+TGG | + | chr1.3:72443310-72443329 | None:intergenic | 35.0% | |
| ! | AATGAGGGCATAAATGATTG+CGG | + | chr1.3:72440929-72440948 | None:intergenic | 35.0% |
| ! | ATTTTTCCATACCCTGCATT+CGG | + | chr1.3:72444465-72444484 | None:intergenic | 35.0% |
| ! | TGGGTCAGAAAATTGTTGTT+GGG | - | chr1.3:72440041-72440060 | MS.gene91354:intron | 35.0% |
| !! | ATAATTTGGTTAGGCATTGG+TGG | - | chr1.3:72442033-72442052 | MS.gene91354:intron | 35.0% |
| !! | CAAGTGAGGATTTACTTTTG+TGG | - | chr1.3:72442001-72442020 | MS.gene91354:intron | 35.0% |
| !! | CAATGTATGAGTTTTGACCT+CGG | + | chr1.3:72440648-72440667 | None:intergenic | 35.0% |
| !! | TACCAAACTGGTTTGTTTCT+TGG | - | chr1.3:72440534-72440553 | MS.gene91354:CDS | 35.0% |
| !! | TGTTTGAATACTTGGTTTGG+GGG | + | chr1.3:72441983-72442002 | None:intergenic | 35.0% |
| !!! | AGTTGACTTGTGCATTTTCA+TGG | - | chr1.3:72443537-72443556 | MS.gene91354:intron | 35.0% |
| !!! | CTACTGTTGTTTTATAGGCA+AGG | - | chr1.3:72442986-72443005 | MS.gene91354:intron | 35.0% |
| !!! | TGTATTTTGATGGAGCTGAT+TGG | - | chr1.3:72442556-72442575 | MS.gene91354:intron | 35.0% |
| !!! | TGTTGTTTTATAGGCAAGGT+TGG | - | chr1.3:72442990-72443009 | MS.gene91354:intron | 35.0% |
| ACAAACTCTTGTAGAACCAG+TGG | + | chr1.3:72443771-72443790 | None:intergenic | 40.0% | |
| AGGATCGAGAACGAATACAT+CGG | + | chr1.3:72442629-72442648 | None:intergenic | 40.0% | |
| AGTTGCAAAACCTCTAGTTG+TGG | - | chr1.3:72443677-72443696 | MS.gene91354:intron | 40.0% | |
| ATAATGAAAGCTGCATCGGA+GGG | - | chr1.3:72442283-72442302 | MS.gene91354:intron | 40.0% | |
| CACTTAACAGTGGTTGATCT+CGG | - | chr1.3:72441209-72441228 | MS.gene91354:intron | 40.0% | |
| CACTTCCTTGGTTGAATACA+TGG | - | chr1.3:72441312-72441331 | MS.gene91354:intron | 40.0% | |
| CATCGCCTAGGAAAGAAATA+TGG | + | chr1.3:72444241-72444260 | None:intergenic | 40.0% | |
| CATGTATTCAACCAAGGAAG+TGG | + | chr1.3:72441314-72441333 | None:intergenic | 40.0% | |
| CATTAAGTACACGAGGAATC+TGG | - | chr1.3:72442338-72442357 | MS.gene91354:intron | 40.0% | |
| CGAAGAAGAAGAAGAAGTGA+TGG | - | chr1.3:72439988-72440007 | MS.gene91354:CDS | 40.0% | |
| CTAAAACTTTCAGGGGAGAT+TGG | + | chr1.3:72442779-72442798 | None:intergenic | 40.0% | |
| CTCAATATGGACAACTCCAA+AGG | + | chr1.3:72440622-72440641 | None:intergenic | 40.0% | |
| CTTATGAAGTCACCAAAGCT+GGG | - | chr1.3:72443063-72443082 | MS.gene91354:CDS | 40.0% | |
| GAAAACCTTGTCGCTAAATG+AGG | + | chr1.3:72440945-72440964 | None:intergenic | 40.0% | |
| GAATTGCAATGCCGTCTATA+GGG | - | chr1.3:72444274-72444293 | MS.gene91354:intron | 40.0% | |
| GATCTTGATCCTAGTATTGC+CGG | - | chr1.3:72444049-72444068 | MS.gene91354:intron | 40.0% | |
| GGGAATACATAAAGGTTGTG+AGG | - | chr1.3:72443924-72443943 | MS.gene91354:intron | 40.0% | |
| TATAATGAAAGCTGCATCGG+AGG | - | chr1.3:72442282-72442301 | MS.gene91354:intron | 40.0% | |
| TATGTGTAATGCAGGAGCAA+GGG | - | chr1.3:72441385-72441404 | MS.gene91354:intron | 40.0% | |
| TGAATTGCAATGCCGTCTAT+AGG | - | chr1.3:72444273-72444292 | MS.gene91354:intron | 40.0% | |
| TGTGTAGTATCCAGAAGATG+TGG | + | chr1.3:72441891-72441910 | None:intergenic | 40.0% | |
| TTATGTGTAATGCAGGAGCA+AGG | - | chr1.3:72441384-72441403 | MS.gene91354:intron | 40.0% | |
| TTGACCTCGGATTCTCAATA+TGG | + | chr1.3:72440635-72440654 | None:intergenic | 40.0% | |
| TTGAGCAAGTGATCCAATAC+AGG | + | chr1.3:72442862-72442881 | None:intergenic | 40.0% | |
| TTGTCCATATTGAGAATCCG+AGG | - | chr1.3:72440628-72440647 | MS.gene91354:intron | 40.0% | |
| TTTGGGAGTTGAGTATGACA+TGG | - | chr1.3:72441847-72441866 | MS.gene91354:CDS | 40.0% | |
| ! | ACTATGGATTGCGGAAATAG+AGG | + | chr1.3:72441096-72441115 | None:intergenic | 40.0% |
| ! | ATGTTTGGAGTTACCACTGT+CGG | - | chr1.3:72441273-72441292 | MS.gene91354:intron | 40.0% |
| ! | CAATCTCCCCTGAAAGTTTT+AGG | - | chr1.3:72442777-72442796 | MS.gene91354:intron | 40.0% |
| ! | TTACGGTTTTTCCGAATGCA+GGG | - | chr1.3:72444451-72444470 | MS.gene91354:CDS | 40.0% |
| ! | TTCTTTTCAGTTGTTAGGCG+AGG | - | chr1.3:72441680-72441699 | MS.gene91354:intron | 40.0% |
| ! | TTTACGGTTTTTCCGAATGC+AGG | - | chr1.3:72444450-72444469 | MS.gene91354:CDS | 40.0% |
| ! | TTTATTTGGGACATTGCAGG+TGG | - | chr1.3:72443875-72443894 | MS.gene91354:intron | 40.0% |
| !! | CAAGTTGGTTATGTATCGCA+TGG | - | chr1.3:72442934-72442953 | MS.gene91354:intron | 40.0% |
| !! | TAGCAGCTATAGCGGATTAA+CGG | - | chr1.3:72443341-72443360 | MS.gene91354:intron | 40.0% |
| !! | TTTCATCTTATGGTGGTGGT+GGG | + | chr1.3:72444100-72444119 | None:intergenic | 40.0% |
| !!! | GTGGGAAAGGGGAATTTTTT+TGG | + | chr1.3:72444082-72444101 | None:intergenic | 40.0% |
| AACAAGCCACTGTCAGAACA+AGG | - | chr1.3:72441433-72441452 | MS.gene91354:CDS | 45.0% | |
| AACCAATCAATGCCGCAGAA+AGG | + | chr1.3:72443209-72443228 | None:intergenic | 45.0% | |
| AACTCTTGTAGAACCAGTGG+AGG | + | chr1.3:72443768-72443787 | None:intergenic | 45.0% | |
| AATGGACCTTGTTCTGACAG+TGG | + | chr1.3:72441442-72441461 | None:intergenic | 45.0% | |
| ACAAGCGAAGTCCCTATAGA+CGG | + | chr1.3:72444288-72444307 | None:intergenic | 45.0% | |
| ACGCTACAGCACAGATGATT+TGG | + | chr1.3:72440976-72440995 | None:intergenic | 45.0% | |
| ATACCAAATGCAACCGTGTC+TGG | - | chr1.3:72442243-72442262 | MS.gene91354:intron | 45.0% | |
| ATCCACCACATCTTGAAGCA+TGG | + | chr1.3:72442686-72442705 | None:intergenic | 45.0% | |
| ATCCAGAAGATGTGGTTGTC+CGG | + | chr1.3:72441883-72441902 | None:intergenic | 45.0% | |
| ATCCATGCTTCAAGATGTGG+TGG | - | chr1.3:72442681-72442700 | MS.gene91354:intron | 45.0% | |
| ATGTGTAATGCAGGAGCAAG+GGG | - | chr1.3:72441386-72441405 | MS.gene91354:intron | 45.0% | |
| ATTCAACCAAGGAAGTGGTC+AGG | + | chr1.3:72441309-72441328 | None:intergenic | 45.0% | |
| CCAATCCATGCTTCAAGATG+TGG | - | chr1.3:72442678-72442697 | MS.gene91354:intron | 45.0% | |
| CCACATCTTGAAGCATGGAT+TGG | + | chr1.3:72442681-72442700 | None:intergenic | 45.0% | |
| CCTTATGAAGTCACCAAAGC+TGG | - | chr1.3:72443062-72443081 | MS.gene91354:CDS | 45.0% | |
| CGCTACAGCACAGATGATTT+GGG | + | chr1.3:72440975-72440994 | None:intergenic | 45.0% | |
| CGTACATCTTGCTCCTGTAT+TGG | - | chr1.3:72442846-72442865 | MS.gene91354:intron | 45.0% | |
| GAGTATGACATGGAGGTGAT+TGG | - | chr1.3:72441857-72441876 | MS.gene91354:CDS | 45.0% | |
| GATGACTAACTTCTGACAGC+TGG | - | chr1.3:72442305-72442324 | MS.gene91354:intron | 45.0% | |
| GATTCGTGAATATGGGACGA+AGG | - | chr1.3:72444321-72444340 | MS.gene91354:intron | 45.0% | |
| GCAAAACCTCTAGTTGTGGA+TGG | - | chr1.3:72443681-72443700 | MS.gene91354:intron | 45.0% | |
| GCTGTAGCGTAATAGTGTTG+TGG | - | chr1.3:72440986-72441005 | MS.gene91354:intron | 45.0% | |
| GGATCGAGAACGAATACATC+GGG | + | chr1.3:72442628-72442647 | None:intergenic | 45.0% | |
| GTAAAGACATGCTCGTAGTC+TGG | + | chr1.3:72444489-72444508 | None:intergenic | 45.0% | |
| GTGTTGTCAATAGCAGGTCA+CGG | + | chr1.3:72443413-72443432 | None:intergenic | 45.0% | |
| TAACCAGACACGGTTGCATT+TGG | + | chr1.3:72442249-72442268 | None:intergenic | 45.0% | |
| TAGCTATTGGCACCTTTCTG+CGG | - | chr1.3:72443194-72443213 | MS.gene91354:intron | 45.0% | |
| TATGCCCTCATTTAGCGACA+AGG | - | chr1.3:72440937-72440956 | MS.gene91354:intron | 45.0% | |
| TCTCCAACAAAGGTCTTGGT+GGG | + | chr1.3:72444159-72444178 | None:intergenic | 45.0% | |
| TGAAAGTAGGCTGAAGTGAG+TGG | + | chr1.3:72441737-72441756 | None:intergenic | 45.0% | |
| TGACCTGCTATTGACAACAC+TGG | - | chr1.3:72443413-72443432 | MS.gene91354:intron | 45.0% | |
| TTCAGTTGTTAGGCGAGGAA+TGG | - | chr1.3:72441685-72441704 | MS.gene91354:intron | 45.0% | |
| TTTGCAAGCCTCTCCAACAA+AGG | + | chr1.3:72444169-72444188 | None:intergenic | 45.0% | |
| ! | AGAAGTGATGGCGAAATCTG+AGG | - | chr1.3:72440000-72440019 | MS.gene91354:CDS | 45.0% |
| ! | CCAGCTTTGGTGACTTCATA+AGG | + | chr1.3:72443065-72443084 | None:intergenic | 45.0% |
| ! | GTTTTACCTGACCACTTCCT+TGG | - | chr1.3:72441300-72441319 | MS.gene91354:intron | 45.0% |
| ! | GTTTTTCCGAATGCAGGGTA+TGG | - | chr1.3:72444456-72444475 | MS.gene91354:CDS | 45.0% |
| ! | TGTTTGGAGTTACCACTGTC+GGG | - | chr1.3:72441274-72441293 | MS.gene91354:intron | 45.0% |
| !! | CATCTTGAAGCATGGATTGG+CGG | + | chr1.3:72442678-72442697 | None:intergenic | 45.0% |
| !! | CTAAAAGTGTCGGTCACGAA+TGG | + | chr1.3:72440500-72440519 | None:intergenic | 45.0% |
| !! | GTGAGTACGACACCGTTTTT+GGG | - | chr1.3:72440022-72440041 | MS.gene91354:CDS | 45.0% |
| !! | GTTTCATCTTATGGTGGTGG+TGG | + | chr1.3:72444101-72444120 | None:intergenic | 45.0% |
| ACACCCACCAAGACCTTTGT+TGG | - | chr1.3:72444153-72444172 | MS.gene91354:intron | 50.0% | |
| AGCCTCTCCAACAAAGGTCT+TGG | + | chr1.3:72444163-72444182 | None:intergenic | 50.0% | |
| ATGACATGGAGGTGATTGGC+CGG | - | chr1.3:72441861-72441880 | MS.gene91354:CDS | 50.0% | |
| CACCAAGACCTTTGTTGGAG+AGG | - | chr1.3:72444158-72444177 | MS.gene91354:intron | 50.0% | |
| CTCTCCAACAAAGGTCTTGG+TGG | + | chr1.3:72444160-72444179 | None:intergenic | 50.0% | |
| GAGCCAGTGTTGTCAATAGC+AGG | + | chr1.3:72443419-72443438 | None:intergenic | 50.0% | |
| GCTGCTGCACATGAAACTCT+TGG | + | chr1.3:72444013-72444032 | None:intergenic | 50.0% | |
| GCTGGCTGAGCTTATAGGTT+AGG | - | chr1.3:72442199-72442218 | MS.gene91354:intron | 50.0% | |
| GGAATCTCACCGGCAATACT+AGG | + | chr1.3:72444061-72444080 | None:intergenic | 50.0% | |
| GGAATGGCGAGAGATCATTG+AGG | - | chr1.3:72441701-72441720 | MS.gene91354:intron | 50.0% | |
| GGGAGTTGAGTATGACATGG+AGG | - | chr1.3:72441850-72441869 | MS.gene91354:CDS | 50.0% | |
| GTGGTTGATCTCGGTAGAAG+TGG | - | chr1.3:72441218-72441237 | MS.gene91354:intron | 50.0% | |
| TTCAGAGCTTGAACCTCCAC+TGG | - | chr1.3:72443752-72443771 | MS.gene91354:intron | 50.0% | |
| ! | ACAAGGCTGGCTGAGCTTAT+AGG | - | chr1.3:72442194-72442213 | MS.gene91354:intron | 50.0% |
| ! | GGTGAGTACGACACCGTTTT+TGG | - | chr1.3:72440021-72440040 | MS.gene91354:CDS | 50.0% |
| ! | GTTTGGAGTTACCACTGTCG+GGG | - | chr1.3:72441275-72441294 | MS.gene91354:intron | 50.0% |
| ! | TTTGGAGTTACCACTGTCGG+GGG | - | chr1.3:72441276-72441295 | MS.gene91354:intron | 50.0% |
| !! | AGCGGATTAACGGCGCTATA+GGG | - | chr1.3:72443351-72443370 | MS.gene91354:intron | 50.0% |
| !! | CACCTTTCTGCGGCATTGAT+TGG | - | chr1.3:72443204-72443223 | MS.gene91354:intron | 50.0% |
| !! | CTTATGGTGGTGGTGGGAAA+GGG | + | chr1.3:72444094-72444113 | None:intergenic | 50.0% |
| !! | TAGCGGATTAACGGCGCTAT+AGG | - | chr1.3:72443350-72443369 | MS.gene91354:intron | 50.0% |
| !! | TCTTATGGTGGTGGTGGGAA+AGG | + | chr1.3:72444095-72444114 | None:intergenic | 50.0% |
| !! | TTATGGTGGTGGTGGGAAAG+GGG | + | chr1.3:72444093-72444112 | None:intergenic | 50.0% |
| AGGTAAAACTCCCCCGACAG+TGG | + | chr1.3:72441289-72441308 | None:intergenic | 55.0% | |
| ATAGCAGCGCTACAGCACAG+TGG | - | chr1.3:72443261-72443280 | MS.gene91354:intron | 55.0% | |
| CGCGAGCTATCAAAAGTCGC+AGG | - | chr1.3:72443974-72443993 | MS.gene91354:intron | 55.0% | |
| CGGCAACTTCAACCCAGCTT+TGG | + | chr1.3:72443078-72443097 | None:intergenic | 55.0% | |
| GCACTGCCATCCACAACTAG+AGG | + | chr1.3:72443690-72443709 | None:intergenic | 55.0% | |
| TGTCGGTCACGAATGGAGCT+CGG | + | chr1.3:72440493-72440512 | None:intergenic | 55.0% | |
| ! | GCTGGGTTGAAGTTGCCGTT+AGG | - | chr1.3:72443080-72443099 | MS.gene91354:CDS | 55.0% |
| GGCCGGACAACCACATCTTC+TGG | - | chr1.3:72441878-72441897 | MS.gene91354:CDS | 60.0% | |
| GTCGGTCACGAATGGAGCTC+GGG | + | chr1.3:72440492-72440511 | None:intergenic | 60.0% | |
| TCGGTCACGAATGGAGCTCG+GGG | + | chr1.3:72440491-72440510 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 72439962 | 72444563 | 72439962 | ID=MS.gene91354 |
| chr1.3 | mRNA | 72439962 | 72444563 | 72439962 | ID=MS.gene91354.t1;Parent=MS.gene91354 |
| chr1.3 | exon | 72444400 | 72444563 | 72444400 | ID=MS.gene91354.t1.exon1;Parent=MS.gene91354.t1 |
| chr1.3 | CDS | 72444400 | 72444563 | 72444400 | ID=cds.MS.gene91354.t1;Parent=MS.gene91354.t1 |
| chr1.3 | exon | 72443045 | 72443126 | 72443045 | ID=MS.gene91354.t1.exon2;Parent=MS.gene91354.t1 |
| chr1.3 | CDS | 72443045 | 72443126 | 72443045 | ID=cds.MS.gene91354.t1;Parent=MS.gene91354.t1 |
| chr1.3 | exon | 72442803 | 72442835 | 72442803 | ID=MS.gene91354.t1.exon3;Parent=MS.gene91354.t1 |
| chr1.3 | CDS | 72442803 | 72442835 | 72442803 | ID=cds.MS.gene91354.t1;Parent=MS.gene91354.t1 |
| chr1.3 | exon | 72441798 | 72441918 | 72441798 | ID=MS.gene91354.t1.exon4;Parent=MS.gene91354.t1 |
| chr1.3 | CDS | 72441798 | 72441918 | 72441798 | ID=cds.MS.gene91354.t1;Parent=MS.gene91354.t1 |
| chr1.3 | exon | 72441424 | 72441522 | 72441424 | ID=MS.gene91354.t1.exon5;Parent=MS.gene91354.t1 |
| chr1.3 | CDS | 72441424 | 72441522 | 72441424 | ID=cds.MS.gene91354.t1;Parent=MS.gene91354.t1 |
| chr1.3 | exon | 72440727 | 72440846 | 72440727 | ID=MS.gene91354.t1.exon6;Parent=MS.gene91354.t1 |
| chr1.3 | CDS | 72440727 | 72440846 | 72440727 | ID=cds.MS.gene91354.t1;Parent=MS.gene91354.t1 |
| chr1.3 | exon | 72440455 | 72440631 | 72440455 | ID=MS.gene91354.t1.exon7;Parent=MS.gene91354.t1 |
| chr1.3 | CDS | 72440455 | 72440631 | 72440455 | ID=cds.MS.gene91354.t1;Parent=MS.gene91354.t1 |
| chr1.3 | exon | 72440318 | 72440373 | 72440318 | ID=MS.gene91354.t1.exon8;Parent=MS.gene91354.t1 |
| chr1.3 | CDS | 72440318 | 72440373 | 72440318 | ID=cds.MS.gene91354.t1;Parent=MS.gene91354.t1 |
| chr1.3 | exon | 72440146 | 72440230 | 72440146 | ID=MS.gene91354.t1.exon9;Parent=MS.gene91354.t1 |
| chr1.3 | CDS | 72440146 | 72440230 | 72440146 | ID=cds.MS.gene91354.t1;Parent=MS.gene91354.t1 |
| chr1.3 | exon | 72439962 | 72440053 | 72439962 | ID=MS.gene91354.t1.exon10;Parent=MS.gene91354.t1 |
| chr1.3 | CDS | 72439962 | 72440053 | 72439962 | ID=cds.MS.gene91354.t1;Parent=MS.gene91354.t1 |
| Gene Sequence |
| Protein sequence |
