Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92394.t1 | XP_003627756.1 | 92.4 | 432 | 29 | 2 | 1 | 429 | 1 | 431 | 1.50E-235 | 825.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92394.t1 | A8MRX0 | 52.7 | 425 | 192 | 4 | 2 | 418 | 11 | 434 | 3.3e-130 | 466.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92394.t1 | G7LEJ7 | 92.4 | 432 | 29 | 2 | 1 | 429 | 1 | 431 | 1.1e-235 | 825.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04986 | MS.gene92394 | 0.806213 | 9.17E-50 | -1.69E-46 |
| MS.gene055204 | MS.gene92394 | 0.806956 | 6.39E-50 | -1.69E-46 |
| MS.gene056185 | MS.gene92394 | 0.919343 | 5.07E-87 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92394.t1 | MTR_8g037910 | 92.361 | 432 | 29 | 2 | 1 | 429 | 1 | 431 | 0.0 | 827 |
| MS.gene92394.t1 | MTR_8g037880 | 84.722 | 432 | 63 | 1 | 1 | 429 | 1 | 432 | 0.0 | 768 |
| MS.gene92394.t1 | MTR_8g037910 | 93.691 | 317 | 19 | 1 | 1 | 317 | 1 | 316 | 0.0 | 614 |
| MS.gene92394.t1 | MTR_8g037910 | 93.040 | 273 | 18 | 1 | 1 | 273 | 1 | 272 | 0.0 | 526 |
| MS.gene92394.t1 | MTR_5g012130 | 51.508 | 431 | 196 | 5 | 4 | 424 | 13 | 440 | 7.09e-150 | 433 |
| MS.gene92394.t1 | MTR_5g012130 | 54.403 | 318 | 142 | 2 | 4 | 318 | 33 | 350 | 5.98e-117 | 345 |
| MS.gene92394.t1 | MTR_3g437580 | 41.435 | 432 | 228 | 10 | 4 | 417 | 13 | 437 | 3.48e-109 | 330 |
| MS.gene92394.t1 | MTR_3g437580 | 43.385 | 325 | 169 | 6 | 4 | 314 | 13 | 336 | 2.80e-88 | 273 |
| MS.gene92394.t1 | MTR_5g012130 | 50.403 | 248 | 120 | 2 | 4 | 248 | 33 | 280 | 1.17e-75 | 238 |
| MS.gene92394.t1 | MTR_3g109520 | 29.524 | 210 | 119 | 6 | 6 | 212 | 41 | 224 | 2.46e-18 | 87.0 |
| MS.gene92394.t1 | MTR_2g450510 | 27.273 | 253 | 127 | 8 | 3 | 222 | 4 | 232 | 1.12e-15 | 79.3 |
| MS.gene92394.t1 | MTR_7g107710 | 22.776 | 281 | 177 | 5 | 4 | 279 | 6 | 251 | 2.26e-15 | 77.8 |
| MS.gene92394.t1 | MTR_2g450310 | 26.877 | 253 | 128 | 8 | 3 | 222 | 4 | 232 | 1.45e-14 | 75.9 |
| MS.gene92394.t1 | MTR_1g011630 | 24.519 | 208 | 128 | 6 | 6 | 212 | 18 | 197 | 1.74e-14 | 75.1 |
| MS.gene92394.t1 | MTR_7g107690 | 25.000 | 236 | 142 | 6 | 3 | 231 | 7 | 214 | 6.43e-14 | 73.2 |
| MS.gene92394.t1 | MTR_1g008380 | 25.837 | 209 | 127 | 6 | 6 | 212 | 44 | 226 | 6.15e-12 | 67.4 |
| MS.gene92394.t1 | MTR_5g033260 | 24.762 | 210 | 131 | 5 | 4 | 211 | 6 | 190 | 2.67e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92394.t1 | AT1G62620 | 52.706 | 425 | 191 | 4 | 4 | 418 | 13 | 437 | 8.95e-158 | 453 |
| MS.gene92394.t1 | AT1G63370 | 52.235 | 425 | 193 | 4 | 4 | 418 | 13 | 437 | 3.60e-156 | 449 |
| MS.gene92394.t1 | AT1G12140 | 52.706 | 425 | 192 | 4 | 2 | 418 | 11 | 434 | 4.60e-154 | 444 |
| MS.gene92394.t1 | AT1G12140 | 52.706 | 425 | 192 | 4 | 2 | 418 | 11 | 434 | 4.60e-154 | 444 |
| MS.gene92394.t1 | AT1G12200 | 52.693 | 427 | 190 | 4 | 4 | 418 | 14 | 440 | 1.39e-152 | 441 |
| MS.gene92394.t1 | AT1G12140 | 52.471 | 425 | 191 | 5 | 2 | 418 | 11 | 432 | 6.58e-151 | 436 |
| MS.gene92394.t1 | AT1G62600 | 51.288 | 427 | 196 | 4 | 4 | 418 | 13 | 439 | 6.94e-149 | 431 |
| MS.gene92394.t1 | AT1G12160 | 49.203 | 439 | 195 | 7 | 4 | 417 | 12 | 447 | 2.58e-147 | 427 |
| MS.gene92394.t1 | AT1G62620 | 55.200 | 375 | 161 | 3 | 4 | 371 | 13 | 387 | 3.18e-146 | 422 |
| MS.gene92394.t1 | AT1G62580 | 52.235 | 425 | 192 | 5 | 4 | 418 | 14 | 437 | 2.84e-145 | 422 |
| MS.gene92394.t1 | AT1G62560 | 48.349 | 424 | 207 | 5 | 4 | 417 | 13 | 434 | 1.99e-144 | 420 |
| MS.gene92394.t1 | AT1G12130 | 50.562 | 445 | 192 | 7 | 4 | 424 | 13 | 453 | 3.96e-144 | 419 |
| MS.gene92394.t1 | AT1G65860 | 49.289 | 422 | 205 | 5 | 4 | 417 | 13 | 433 | 7.41e-144 | 418 |
| MS.gene92394.t1 | AT1G62540 | 50.711 | 422 | 199 | 5 | 4 | 417 | 13 | 433 | 6.15e-142 | 413 |
| MS.gene92394.t1 | AT1G62570 | 49.764 | 424 | 200 | 6 | 4 | 417 | 13 | 433 | 1.04e-138 | 405 |
| MS.gene92394.t1 | AT1G62540 | 48.546 | 447 | 196 | 7 | 4 | 417 | 13 | 458 | 3.04e-138 | 405 |
| MS.gene92394.t1 | AT1G62580 | 48.690 | 458 | 191 | 8 | 4 | 418 | 14 | 470 | 4.83e-138 | 405 |
| MS.gene92394.t1 | AT1G62600 | 53.316 | 377 | 167 | 3 | 4 | 371 | 13 | 389 | 4.54e-137 | 399 |
| MS.gene92394.t1 | AT1G62560 | 50.660 | 379 | 178 | 4 | 4 | 375 | 13 | 389 | 8.42e-136 | 395 |
| MS.gene92394.t1 | AT1G62540 | 48.578 | 422 | 190 | 7 | 4 | 417 | 13 | 415 | 5.34e-131 | 385 |
| MS.gene92394.t1 | AT1G63340 | 47.518 | 423 | 175 | 5 | 4 | 418 | 14 | 397 | 3.23e-130 | 382 |
| MS.gene92394.t1 | AT1G63370 | 55.728 | 323 | 136 | 3 | 4 | 319 | 13 | 335 | 1.58e-125 | 367 |
| MS.gene92394.t1 | AT5G61290 | 44.573 | 433 | 214 | 7 | 4 | 417 | 16 | 441 | 6.51e-120 | 357 |
| MS.gene92394.t1 | AT1G12200 | 55.590 | 322 | 135 | 2 | 4 | 317 | 14 | 335 | 1.24e-119 | 353 |
| MS.gene92394.t1 | AT5G07800 | 42.299 | 435 | 225 | 9 | 3 | 417 | 15 | 443 | 6.58e-112 | 337 |
| MS.gene92394.t1 | AT1G62580 | 54.079 | 331 | 135 | 3 | 4 | 317 | 14 | 344 | 2.13e-111 | 332 |
| MS.gene92394.t1 | AT1G63390 | 58.042 | 143 | 53 | 2 | 4 | 139 | 13 | 155 | 8.07e-43 | 148 |
| MS.gene92394.t1 | AT5G45180 | 25.000 | 480 | 236 | 22 | 3 | 390 | 12 | 459 | 2.04e-19 | 90.5 |
| MS.gene92394.t1 | AT1G19250 | 29.876 | 241 | 114 | 8 | 3 | 212 | 12 | 228 | 7.53e-17 | 83.2 |
| MS.gene92394.t1 | AT4G13260 | 23.445 | 209 | 133 | 5 | 6 | 212 | 30 | 213 | 1.28e-13 | 71.6 |
| MS.gene92394.t1 | AT4G13260 | 23.445 | 209 | 133 | 5 | 6 | 212 | 30 | 213 | 3.01e-13 | 71.6 |
| MS.gene92394.t1 | AT5G11320 | 23.188 | 207 | 130 | 5 | 6 | 212 | 19 | 196 | 6.89e-12 | 67.0 |
| MS.gene92394.t1 | AT5G11320 | 23.188 | 207 | 130 | 5 | 6 | 212 | 19 | 196 | 1.81e-11 | 65.9 |
| MS.gene92394.t1 | AT1G04610 | 22.897 | 214 | 129 | 5 | 6 | 211 | 39 | 224 | 1.95e-11 | 65.9 |
| MS.gene92394.t1 | AT5G25620 | 23.364 | 214 | 137 | 5 | 6 | 217 | 34 | 222 | 3.20e-11 | 65.1 |
| MS.gene92394.t1 | AT5G25620 | 23.364 | 214 | 137 | 5 | 6 | 217 | 34 | 222 | 4.36e-11 | 65.1 |
Find 118 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACAGGTTGTGATCTTAAT+TGG | 0.129363 | 8.4:+60364168 | MS.gene92394:intron |
| CCGAGACTTGCTTTGGTTCC+TGG | 0.187863 | 8.4:+60363434 | MS.gene92394:CDS |
| CTGTGATCCGAGAACGTTTC+CGG | 0.221154 | 8.4:+60363214 | MS.gene92394:CDS |
| TCATTCCATACGGCCGTTTC+AGG | 0.244774 | 8.4:+60365028 | MS.gene92394:CDS |
| GCTCCATGGCTCTCTTTCAT+TGG | 0.284807 | 8.4:+60364749 | MS.gene92394:CDS |
| GTGATCGGCGCCGGAGTTTC+CGG | 0.300252 | 8.4:+60362963 | MS.gene92394:CDS |
| ATTCCTTTCCTCGAAACTAA+TGG | 0.337402 | 8.4:+60364662 | MS.gene92394:CDS |
| GGTTGCCTCCGTTAGAAGAT+TGG | 0.375234 | 8.4:+60366160 | MS.gene92394:CDS |
| AACTTCATACCCTTCAATAG+TGG | 0.379745 | 8.4:-60364270 | None:intergenic |
| ATGACTGGGATGATAACTAT+TGG | 0.380916 | 8.4:+60366235 | MS.gene92394:CDS |
| CTGTGAACTGTTTCTCTGGT+TGG | 0.381244 | 8.4:-60363110 | None:intergenic |
| GAAGCGGTTATTGTGTGTTC+AGG | 0.389205 | 8.4:+60363398 | MS.gene92394:CDS |
| ATACCCTTCAATAGTGGATT+CGG | 0.390856 | 8.4:-60364264 | None:intergenic |
| TGTGAACTGTTTCTCTGGTT+GGG | 0.399952 | 8.4:-60363109 | None:intergenic |
| TGTGATCCGAGAACGTTTCC+GGG | 0.400644 | 8.4:+60363215 | MS.gene92394:CDS |
| TCATGACCCGGAAACGTTCT+CGG | 0.402567 | 8.4:-60363221 | None:intergenic |
| TGTGGAACCGAGACTTGCTT+TGG | 0.402751 | 8.4:+60363427 | MS.gene92394:CDS |
| TCACTACCTCCGCTTCAAAT+CGG | 0.403777 | 8.4:-60363301 | None:intergenic |
| CACTACCTCCGCTTCAAATC+GGG | 0.403988 | 8.4:-60363300 | None:intergenic |
| CAATGGCTAGCGGCACAGAT+TGG | 0.414104 | 8.4:+60366138 | MS.gene92394:CDS |
| GGCGATGAGGCCGGAAACTC+CGG | 0.417019 | 8.4:-60362973 | None:intergenic |
| GCCTTCCTGTTGTAGCTCCT+TGG | 0.421074 | 8.4:-60362997 | None:intergenic |
| TTCCTCCTTCGCTGGCTCCA+TGG | 0.424941 | 8.4:+60364735 | MS.gene92394:CDS |
| GACATCTCAAAAGATATTGC+AGG | 0.428767 | 8.4:+60364210 | MS.gene92394:CDS |
| TACAGGTTGTGATCTTAATT+GGG | 0.433986 | 8.4:+60364169 | MS.gene92394:intron |
| AAATCTTCCAAGGCAAATCA+TGG | 0.439066 | 8.4:+60363157 | MS.gene92394:CDS |
| ATTAAATGTGTATATGAAGA+TGG | 0.442499 | 8.4:+60364442 | MS.gene92394:CDS |
| AGAGGAAAGGAGGGAAGGAG+TGG | 0.442535 | 8.4:+60363330 | MS.gene92394:CDS |
| GGAGTGGGTGGTTGAGTCAA+GGG | 0.444147 | 8.4:+60363346 | MS.gene92394:CDS |
| TTACTATTCCATTAGTTTCG+AGG | 0.445234 | 8.4:-60364670 | None:intergenic |
| GATGCAATAATTCACTGTAC+AGG | 0.451805 | 8.4:+60364502 | MS.gene92394:CDS |
| GGCTTGGTTGCCTTTGAAGA+TGG | 0.455524 | 8.4:+60364463 | MS.gene92394:CDS |
| CGCCGCCAAGGAGCTACAAC+AGG | 0.458403 | 8.4:+60362992 | MS.gene92394:CDS |
| CCTGGTGTTGAAAACTTTGG+TGG | 0.460121 | 8.4:+60363452 | MS.gene92394:CDS |
| ACTGCTGTGAACTGTTTCTC+TGG | 0.461299 | 8.4:-60363114 | None:intergenic |
| TGAAAGTTGAGAGGAAAGGA+GGG | 0.461708 | 8.4:+60363321 | MS.gene92394:CDS |
| ACCTACTGAAGAAGAAATGA+TGG | 0.467935 | 8.4:+60364947 | MS.gene92394:CDS |
| AGGATTCTCGCTTGGACAAA+GGG | 0.470355 | 8.4:-60363193 | None:intergenic |
| CGGATCACAGGATTCTCGCT+TGG | 0.472811 | 8.4:-60363201 | None:intergenic |
| AAGAATCCCATGATTTGCCT+TGG | 0.478861 | 8.4:-60363164 | None:intergenic |
| ATGGTTAAAGTTGCAGTGAT+CGG | 0.483813 | 8.4:+60362948 | MS.gene92394:CDS |
| AATGGCTAGCGGCACAGATT+GGG | 0.485605 | 8.4:+60366139 | MS.gene92394:CDS |
| CTCCTTGGCGGCGATGAGGC+CGG | 0.486051 | 8.4:-60362982 | None:intergenic |
| AGGAGTGGGTGGTTGAGTCA+AGG | 0.487181 | 8.4:+60363345 | MS.gene92394:CDS |
| GAGGAAAGGAGGGAAGGAGT+GGG | 0.487432 | 8.4:+60363331 | MS.gene92394:CDS |
| CAGGATTCTCGCTTGGACAA+AGG | 0.488933 | 8.4:-60363194 | None:intergenic |
| GAGAAGAACAACCGCGTTGG+AGG | 0.491903 | 8.4:+60363038 | MS.gene92394:CDS |
| TTGGATGGACAATATGTTGA+TGG | 0.492691 | 8.4:+60366179 | MS.gene92394:CDS |
| GTGAAAGTTGAGAGGAAAGG+AGG | 0.493392 | 8.4:+60363320 | MS.gene92394:CDS |
| ACTATTGAAGGGTATGAAGT+TGG | 0.493692 | 8.4:+60364272 | MS.gene92394:CDS |
| GCTGGTGAGTTTGGGATACA+CGG | 0.497630 | 8.4:+60363272 | MS.gene92394:CDS |
| GAAAGGAGGGAAGGAGTGGG+TGG | 0.498908 | 8.4:+60363334 | MS.gene92394:CDS |
| ATTCCATTAGTTTCGAGGAA+AGG | 0.505621 | 8.4:-60364665 | None:intergenic |
| TAAAGACATATATCGCATCT+TGG | 0.506300 | 8.4:+60364977 | MS.gene92394:CDS |
| ACAAACGCAAATACCTGAAA+CGG | 0.515007 | 8.4:-60365041 | None:intergenic |
| TGACTGGGATGATAACTATT+GGG | 0.515543 | 8.4:+60366236 | MS.gene92394:CDS |
| ATGGAATGAGTGTAACGCTT+GGG | 0.516942 | 8.4:-60365014 | None:intergenic |
| CGAAGCATTTCTTCATGACC+CGG | 0.517432 | 8.4:-60363233 | None:intergenic |
| AGCCATGGAGCCAGCGAAGG+AGG | 0.524115 | 8.4:-60364737 | None:intergenic |
| AGTTGAGAGGAAAGGAGGGA+AGG | 0.527409 | 8.4:+60363325 | MS.gene92394:CDS |
| GTTCCTGGTGTTGAAAACTT+TGG | 0.527780 | 8.4:+60363449 | MS.gene92394:CDS |
| TCCTCACTCTTTCAAAGACC+AGG | 0.534154 | 8.4:+60363505 | MS.gene92394:CDS |
| TTTGAGATGTCAAATGAACT+AGG | 0.538090 | 8.4:-60364198 | None:intergenic |
| TTCCTGTTGTAGCTCCTTGG+CGG | 0.540823 | 8.4:-60362994 | None:intergenic |
| CGATTGAAGATAATCGCGTT+GGG | 0.546471 | 8.4:+60364693 | MS.gene92394:CDS |
| CGGAAACGTTCTCGGATCAC+AGG | 0.547744 | 8.4:-60363213 | None:intergenic |
| AATCTTACCAGATAAAACTC+TGG | 0.548944 | 8.4:-60364919 | None:intergenic |
| TAAAACTCTGGCAACCCACT+TGG | 0.550687 | 8.4:-60364907 | None:intergenic |
| TCTCGAAAACGACGACGTTG+TGG | 0.551159 | 8.4:-60363019 | None:intergenic |
| AAATACCTGAAACGGCCGTA+TGG | 0.552669 | 8.4:-60365033 | None:intergenic |
| CGGAGGTAGTGAAAGTTGAG+AGG | 0.553936 | 8.4:+60363312 | MS.gene92394:CDS |
| TTCCGGCCTCATCGCCGCCA+AGG | 0.554489 | 8.4:+60362980 | MS.gene92394:CDS |
| ACAACCGCGTTGGAGGAACC+TGG | 0.554708 | 8.4:+60363045 | MS.gene92394:CDS |
| ATGAAATGTATAGAGATGAC+TGG | 0.555017 | 8.4:+60366220 | MS.gene92394:CDS |
| TCCATCATTTCTTCTTCAGT+AGG | 0.556672 | 8.4:-60364948 | None:intergenic |
| GTTGTGATCTTAATTGGGCT+AGG | 0.557914 | 8.4:+60364174 | MS.gene92394:CDS |
| ACGATTGAAGATAATCGCGT+TGG | 0.558753 | 8.4:+60364692 | MS.gene92394:CDS |
| GAGTGGGTGGTTGAGTCAAG+GGG | 0.560947 | 8.4:+60363347 | MS.gene92394:CDS |
| AAAGTTGCAGTGATCGGCGC+CGG | 0.565896 | 8.4:+60362954 | MS.gene92394:CDS |
| AGTAGAGAATCCATCTTCAA+AGG | 0.568751 | 8.4:-60364473 | None:intergenic |
| CTTTACGCACAAATCTTCCA+AGG | 0.568859 | 8.4:+60363147 | MS.gene92394:CDS |
| TTCGAGAAGAACAACCGCGT+TGG | 0.570371 | 8.4:+60363035 | MS.gene92394:CDS |
| AAAACCGAATCCACTATTGA+AGG | 0.571520 | 8.4:+60364260 | MS.gene92394:CDS |
| GAGAGCCATGGAGCCAGCGA+AGG | 0.571530 | 8.4:-60364740 | None:intergenic |
| GTAGCTCCTTGGCGGCGATG+AGG | 0.577088 | 8.4:-60362986 | None:intergenic |
| GCCTCCGTTAGAAGATTGGA+TGG | 0.580895 | 8.4:+60366164 | MS.gene92394:CDS |
| AATCTTCCAAGGCAAATCAT+GGG | 0.585719 | 8.4:+60363158 | MS.gene92394:CDS |
| AGATATTGCAGGAGTTGCAA+AGG | 0.586378 | 8.4:+60364221 | MS.gene92394:CDS |
| AAACCGAATCCACTATTGAA+GGG | 0.595030 | 8.4:+60364261 | MS.gene92394:CDS |
| TATGGAATGAGTGTAACGCT+TGG | 0.596759 | 8.4:-60365015 | None:intergenic |
| CTGGTTGGGTCTATACTAAG+AGG | 0.600004 | 8.4:-60363095 | None:intergenic |
| GCCAAGGAGCTACAACAGGA+AGG | 0.605200 | 8.4:+60362996 | MS.gene92394:CDS |
| GAAGATTTGTGCGTAAAGAG+TGG | 0.607471 | 8.4:-60363142 | None:intergenic |
| TGGGTCTATACTAAGAGGAT+CGG | 0.608316 | 8.4:-60363090 | None:intergenic |
| ATGTGTATATGAAGATGGCT+TGG | 0.608479 | 8.4:+60364447 | MS.gene92394:CDS |
| CGGGTTGACCCGATTTGAAG+CGG | 0.611462 | 8.4:+60363292 | MS.gene92394:CDS |
| TGGGTGGTTGAGTCAAGGGG+AGG | 0.612041 | 8.4:+60363350 | MS.gene92394:CDS |
| CTGGTGAGTTTGGGATACAC+GGG | 0.612264 | 8.4:+60363273 | MS.gene92394:CDS |
| TTGTCCATCCAATCTTCTAA+CGG | 0.613321 | 8.4:-60366168 | None:intergenic |
| GTAGTGAAAGTTGAGAGGAA+AGG | 0.614071 | 8.4:+60363317 | MS.gene92394:CDS |
| CCAGGAACCAAAGCAAGTCT+CGG | 0.614201 | 8.4:-60363434 | None:intergenic |
| ATGCAATAATTCACTGTACA+GGG | 0.617168 | 8.4:+60364503 | MS.gene92394:CDS |
| AATTGAGTTACAAGCCAAGT+GGG | 0.620693 | 8.4:+60364893 | MS.gene92394:CDS |
| GGTATGAAGTTGGAAAATGC+TGG | 0.621768 | 8.4:+60364282 | MS.gene92394:CDS |
| TAGTTTCGAGGAAAGGAATG+TGG | 0.628193 | 8.4:-60364658 | None:intergenic |
| GAGTCAAGAAGTGTTTGAAG+CGG | 0.628510 | 8.4:+60363382 | MS.gene92394:CDS |
| CAATATATGTTTCCATACTG+TGG | 0.630725 | 8.4:+60364305 | MS.gene92394:CDS |
| AGCGTTACACTCATTCCATA+CGG | 0.631523 | 8.4:+60365018 | MS.gene92394:CDS |
| ACCTGGTCTTTGAAAGAGTG+AGG | 0.636343 | 8.4:-60363506 | None:intergenic |
| AAACCAATGAAAGAGAGCCA+TGG | 0.638563 | 8.4:-60364752 | None:intergenic |
| TGAAATGTATAGAGATGACT+GGG | 0.657076 | 8.4:+60366221 | MS.gene92394:CDS |
| TAATTGAGTTACAAGCCAAG+TGG | 0.658830 | 8.4:+60364892 | MS.gene92394:CDS |
| TCCATCCAATCTTCTAACGG+AGG | 0.663161 | 8.4:-60366165 | None:intergenic |
| AGACATATATCGCATCTTGG+AGG | 0.672722 | 8.4:+60364980 | MS.gene92394:CDS |
| GTTGACCCGATTTGAAGCGG+AGG | 0.673696 | 8.4:+60363295 | MS.gene92394:CDS |
| GTCAGGCTGACTACAAACAA+TGG | 0.679900 | 8.4:+60366121 | MS.gene92394:intron |
| TGACTACAAACAATGGCTAG+CGG | 0.698143 | 8.4:+60366128 | MS.gene92394:CDS |
| ATATCCAGGTTCCTCCAACG+CGG | 0.760535 | 8.4:-60363049 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATTTCCAAATAAAAT+AGG | - | chr8.4:60364135-60364154 | None:intergenic | 10.0% |
| !!! | AAATATTTAGATTTAGATTT+TGG | + | chr8.4:60363639-60363658 | MS.gene92394:intron | 10.0% |
| !!! | ATTTAATAAGTTGAAATTAT+TGG | + | chr8.4:60363568-60363587 | MS.gene92394:intron | 10.0% |
| !!! | ATTTTATTTGGAAATTTAAT+TGG | + | chr8.4:60364135-60364154 | MS.gene92394:intron | 10.0% |
| !! | AATATCTATCATATAAAGTA+TGG | - | chr8.4:60364368-60364387 | None:intergenic | 15.0% |
| !! | ATATAAACAAATATTGTAAC+AGG | + | chr8.4:60364627-60364646 | MS.gene92394:intron | 15.0% |
| !!! | ATTTTCCAAATTTGAAAAAA+TGG | + | chr8.4:60363536-60363555 | MS.gene92394:intron | 15.0% |
| !!! | TAAAACCATTTTTTCAAATT+TGG | - | chr8.4:60363544-60363563 | None:intergenic | 15.0% |
| !! | AATATTGTACAATTTAATCC+AGG | + | chr8.4:60363677-60363696 | MS.gene92394:intron | 20.0% |
| !! | ATTAAATGTGTATATGAAGA+TGG | + | chr8.4:60364442-60364461 | MS.gene92394:CDS | 20.0% |
| !! | TAAAAGAAAAAATACGTTGA+AGG | - | chr8.4:60364555-60364574 | None:intergenic | 20.0% |
| !! | TACAAGTAAATAGTTAAACT+CGG | - | chr8.4:60366091-60366110 | None:intergenic | 20.0% |
| !!! | AATCTCTAGATTTTACAAAT+TGG | - | chr8.4:60365992-60366011 | None:intergenic | 20.0% |
| !!! | AGAAGAAAGTTCATTATTTT+TGG | + | chr8.4:60363861-60363880 | MS.gene92394:intron | 20.0% |
| !!! | ATAAAATGCTAATTTGCTTA+TGG | - | chr8.4:60365834-60365853 | None:intergenic | 20.0% |
| !!! | ATTAAGATGAAGTATTTCAA+TGG | + | chr8.4:60363596-60363615 | MS.gene92394:intron | 20.0% |
| !!! | CTAAGAAATTAATCATTTTG+AGG | + | chr8.4:60364603-60364622 | MS.gene92394:intron | 20.0% |
| !!! | TGTTTAATGCCTATTTTATT+TGG | + | chr8.4:60364123-60364142 | MS.gene92394:intron | 20.0% |
| ! | AACTCGGAAGAATTTATAAT+CGG | - | chr8.4:60366075-60366094 | None:intergenic | 25.0% |
| ! | AAGAATTTATAATCGGATAC+AGG | - | chr8.4:60366068-60366087 | None:intergenic | 25.0% |
| ! | ATCGTTAAAATTATAAGCAC+CGG | - | chr8.4:60366022-60366041 | None:intergenic | 25.0% |
| ! | TGGAGATATTTATTATGAGA+CGG | - | chr8.4:60364348-60364367 | None:intergenic | 25.0% |
| ! | TTAAGCATTTCTCTAAACAA+TGG | + | chr8.4:60365202-60365221 | MS.gene92394:intron | 25.0% |
| ! | TTACAATAGAAATAGTTTCC+TGG | - | chr8.4:60364875-60364894 | None:intergenic | 25.0% |
| !! | AAATTTTCCAACAAATGTGT+TGG | - | chr8.4:60363815-60363834 | None:intergenic | 25.0% |
| !! | ATTTTTAACATACCACAGTA+TGG | - | chr8.4:60364320-60364339 | None:intergenic | 25.0% |
| !! | CACATCTATATGTTTTCATA+GGG | + | chr8.4:60365476-60365495 | MS.gene92394:intron | 25.0% |
| !! | GGATAATTTTGCTCAATTAA+CGG | + | chr8.4:60365090-60365109 | MS.gene92394:intron | 25.0% |
| !! | TATTTGTGAGTTGAATTTGA+GGG | + | chr8.4:60365313-60365332 | MS.gene92394:intron | 25.0% |
| !! | TCATCTGAAATTGTATGTAA+TGG | + | chr8.4:60365267-60365286 | MS.gene92394:intron | 25.0% |
| !!! | AATTGTGTTTTTGTTTGAGT+CGG | + | chr8.4:60364014-60364033 | MS.gene92394:intron | 25.0% |
| !!! | GTTACTAGAGAATGTTTTAA+AGG | + | chr8.4:60365935-60365954 | MS.gene92394:intron | 25.0% |
| !!! | TCAATTAACGGATTTAAGAT+AGG | + | chr8.4:60365102-60365121 | MS.gene92394:intron | 25.0% |
| !!! | TTATGTCATGTTTTTTCTAG+AGG | + | chr8.4:60365738-60365757 | MS.gene92394:intron | 25.0% |
| AAATTAGTTCCTTATAGAGC+TGG | - | chr8.4:60365707-60365726 | None:intergenic | 30.0% | |
| AATCTTACCAGATAAAACTC+TGG | - | chr8.4:60364922-60364941 | None:intergenic | 30.0% | |
| ACTAGTAGAGTCAACAAAAT+TGG | - | chr8.4:60363791-60363810 | None:intergenic | 30.0% | |
| ACTTGTAAAATTACTCTGTC+AGG | + | chr8.4:60366104-60366123 | MS.gene92394:intron | 30.0% | |
| AGACTAAAACGATTAACACA+TGG | - | chr8.4:60363709-60363728 | None:intergenic | 30.0% | |
| ATCCAATGAAATGTATAGTG+AGG | - | chr8.4:60365074-60365093 | None:intergenic | 30.0% | |
| ATGAAATGTATAGAGATGAC+TGG | + | chr8.4:60366220-60366239 | MS.gene92394:CDS | 30.0% | |
| ATGCAATAATTCACTGTACA+GGG | + | chr8.4:60364503-60364522 | MS.gene92394:CDS | 30.0% | |
| CAATATATGTTTCCATACTG+TGG | + | chr8.4:60364305-60364324 | MS.gene92394:CDS | 30.0% | |
| CAATGGATATTAATGCAAGT+AGG | + | chr8.4:60363613-60363632 | MS.gene92394:intron | 30.0% | |
| CCTATGAAAACATATAGATG+TGG | - | chr8.4:60365478-60365497 | None:intergenic | 30.0% | |
| GGAAAAACATGTTTGTATAG+TGG | - | chr8.4:60364719-60364738 | None:intergenic | 30.0% | |
| TAAAGACATATATCGCATCT+TGG | + | chr8.4:60364977-60364996 | MS.gene92394:CDS | 30.0% | |
| TACAGGTTGTGATCTTAATT+GGG | + | chr8.4:60364169-60364188 | MS.gene92394:intron | 30.0% | |
| TCAAAGATCAAAGTGACTAA+TGG | + | chr8.4:60363972-60363991 | MS.gene92394:intron | 30.0% | |
| TGAAATGTATAGAGATGACT+GGG | + | chr8.4:60366221-60366240 | MS.gene92394:CDS | 30.0% | |
| TGTATTAGAGAAAGACACAT+AGG | + | chr8.4:60363742-60363761 | MS.gene92394:intron | 30.0% | |
| TTTGGAAAATGTAATGTACC+TGG | - | chr8.4:60363526-60363545 | None:intergenic | 30.0% | |
| ! | AAGCATCGTTCAATTGTTAA+AGG | + | chr8.4:60365173-60365192 | MS.gene92394:intron | 30.0% |
| ! | AATGGAGACTTTTCGTTTAT+AGG | + | chr8.4:60365220-60365239 | MS.gene92394:intron | 30.0% |
| ! | AATTGGTAATTACTACCTAC+AGG | + | chr8.4:60364152-60364171 | MS.gene92394:intron | 30.0% |
| ! | ATATGTTTTCATAGGGAACT+AGG | + | chr8.4:60365483-60365502 | MS.gene92394:intron | 30.0% |
| ! | CCACATCTATATGTTTTCAT+AGG | + | chr8.4:60365475-60365494 | MS.gene92394:intron | 30.0% |
| ! | GAACTTCGAGTTAAAAAAAC+AGG | + | chr8.4:60365595-60365614 | MS.gene92394:intron | 30.0% |
| ! | GTATTTGTGAGTTGAATTTG+AGG | + | chr8.4:60365312-60365331 | MS.gene92394:intron | 30.0% |
| ! | TATGTTTTCATAGGGAACTA+GGG | + | chr8.4:60365484-60365503 | MS.gene92394:intron | 30.0% |
| ! | TTACTATTCCATTAGTTTCG+AGG | - | chr8.4:60364673-60364692 | None:intergenic | 30.0% |
| ! | TTTGAGATGTCAAATGAACT+AGG | - | chr8.4:60364201-60364220 | None:intergenic | 30.0% |
| !!! | AATCTAGAGATTGTTTTGAC+CGG | + | chr8.4:60366000-60366019 | MS.gene92394:intron | 30.0% |
| !!! | GTTTTTTCTAGAGGAAGTTT+AGG | + | chr8.4:60365747-60365766 | MS.gene92394:intron | 30.0% |
| !!! | TGAAGAAATGCTTCGTTTTT+TGG | + | chr8.4:60363241-60363260 | MS.gene92394:CDS | 30.0% |
| !!! | TTGAATTTGAGGGTTTTGAA+GGG | + | chr8.4:60365323-60365342 | MS.gene92394:intron | 30.0% |
| AAAACCGAATCCACTATTGA+AGG | + | chr8.4:60364260-60364279 | MS.gene92394:CDS | 35.0% | |
| AAACCGAATCCACTATTGAA+GGG | + | chr8.4:60364261-60364280 | MS.gene92394:CDS | 35.0% | |
| AAATCTTCCAAGGCAAATCA+TGG | + | chr8.4:60363157-60363176 | MS.gene92394:CDS | 35.0% | |
| AACTCACAAATACACCCTAA+GGG | - | chr8.4:60365305-60365324 | None:intergenic | 35.0% | |
| AACTTCATACCCTTCAATAG+TGG | - | chr8.4:60364273-60364292 | None:intergenic | 35.0% | |
| AATCTTCCAAGGCAAATCAT+GGG | + | chr8.4:60363158-60363177 | MS.gene92394:CDS | 35.0% | |
| AATTGAGTTACAAGCCAAGT+GGG | + | chr8.4:60364893-60364912 | MS.gene92394:CDS | 35.0% | |
| ACAAACGCAAATACCTGAAA+CGG | - | chr8.4:60365044-60365063 | None:intergenic | 35.0% | |
| ACCTACTGAAGAAGAAATGA+TGG | + | chr8.4:60364947-60364966 | MS.gene92394:CDS | 35.0% | |
| ACTAGTACCAACACATTTGT+TGG | + | chr8.4:60363805-60363824 | MS.gene92394:intron | 35.0% | |
| AGACTTCTGATGTGTTATCA+GGG | - | chr8.4:60363904-60363923 | None:intergenic | 35.0% | |
| AGTAGAGAATCCATCTTCAA+AGG | - | chr8.4:60364476-60364495 | None:intergenic | 35.0% | |
| ATGACTGGGATGATAACTAT+TGG | + | chr8.4:60366235-60366254 | MS.gene92394:CDS | 35.0% | |
| ATGGTTAAAGTTGCAGTGAT+CGG | + | chr8.4:60362948-60362967 | MS.gene92394:CDS | 35.0% | |
| ATGTGTATATGAAGATGGCT+TGG | + | chr8.4:60364447-60364466 | MS.gene92394:CDS | 35.0% | |
| ATTAACACATGGAACAATCC+TGG | - | chr8.4:60363698-60363717 | None:intergenic | 35.0% | |
| ATTAGAGAAAGACACATAGG+CGG | + | chr8.4:60363745-60363764 | MS.gene92394:intron | 35.0% | |
| ATTCCTTTCCTCGAAACTAA+TGG | + | chr8.4:60364662-60364681 | MS.gene92394:CDS | 35.0% | |
| CAATGACATTGCACATGTAT+TGG | + | chr8.4:60365429-60365448 | MS.gene92394:intron | 35.0% | |
| CAATTAAGATCACAACCTGT+AGG | - | chr8.4:60364170-60364189 | None:intergenic | 35.0% | |
| CTACAGGTTGTGATCTTAAT+TGG | + | chr8.4:60364168-60364187 | MS.gene92394:intron | 35.0% | |
| CTCCTCACTATACATTTCAT+TGG | + | chr8.4:60365069-60365088 | MS.gene92394:intron | 35.0% | |
| GAACCAACTCGATAATAGTT+CGG | + | chr8.4:60365520-60365539 | MS.gene92394:intron | 35.0% | |
| GAACTTTCTTCTCCTATGAA+TGG | - | chr8.4:60363853-60363872 | None:intergenic | 35.0% | |
| GACAATTAACTCGTTGAACT+TGG | + | chr8.4:60365553-60365572 | MS.gene92394:intron | 35.0% | |
| GACATCTCAAAAGATATTGC+AGG | + | chr8.4:60364210-60364229 | MS.gene92394:CDS | 35.0% | |
| GACTCTACTAAACCATTCAT+AGG | + | chr8.4:60363838-60363857 | MS.gene92394:intron | 35.0% | |
| GATGCAATAATTCACTGTAC+AGG | + | chr8.4:60364502-60364521 | MS.gene92394:CDS | 35.0% | |
| TAATTGAGTTACAAGCCAAG+TGG | + | chr8.4:60364892-60364911 | MS.gene92394:CDS | 35.0% | |
| TAGACTTCTGATGTGTTATC+AGG | - | chr8.4:60363905-60363924 | None:intergenic | 35.0% | |
| TCCATCATTTCTTCTTCAGT+AGG | - | chr8.4:60364951-60364970 | None:intergenic | 35.0% | |
| TGACTCGATAAGAATTGACT+CGG | - | chr8.4:60365650-60365669 | None:intergenic | 35.0% | |
| TGACTGGGATGATAACTATT+GGG | + | chr8.4:60366236-60366255 | MS.gene92394:CDS | 35.0% | |
| TGATGTGACACGTTAATATG+CGG | - | chr8.4:60365890-60365909 | None:intergenic | 35.0% | |
| TTGGATGGACAATATGTTGA+TGG | + | chr8.4:60366179-60366198 | MS.gene92394:CDS | 35.0% | |
| TTGTCCATCCAATCTTCTAA+CGG | - | chr8.4:60366171-60366190 | None:intergenic | 35.0% | |
| ! | ACTATTGAAGGGTATGAAGT+TGG | + | chr8.4:60364272-60364291 | MS.gene92394:CDS | 35.0% |
| ! | ATTCCATTAGTTTCGAGGAA+AGG | - | chr8.4:60364668-60364687 | None:intergenic | 35.0% |
| ! | TATAGCGCAAACCATCATTT+TGG | - | chr8.4:60364074-60364093 | None:intergenic | 35.0% |
| !! | ATACCCTTCAATAGTGGATT+CGG | - | chr8.4:60364267-60364286 | None:intergenic | 35.0% |
| !! | GAACTATTATCGAGTTGGTT+CGG | - | chr8.4:60365521-60365540 | None:intergenic | 35.0% |
| !! | GTTGAATTTGAGGGTTTTGA+AGG | + | chr8.4:60365322-60365341 | MS.gene92394:intron | 35.0% |
| !! | TAATATTTCTAGACTTGCCG+TGG | + | chr8.4:60364849-60364868 | MS.gene92394:intron | 35.0% |
| !!! | AGAAATGCTTCGTTTTTTGG+AGG | + | chr8.4:60363244-60363263 | MS.gene92394:CDS | 35.0% |
| !!! | TGTTTTTGGAGTGTATATCC+AGG | - | chr8.4:60363066-60363085 | None:intergenic | 35.0% |
| AAACCAATGAAAGAGAGCCA+TGG | - | chr8.4:60364755-60364774 | None:intergenic | 40.0% | |
| AACTCGAAGTTCAGCTCATT+TGG | - | chr8.4:60365587-60365606 | None:intergenic | 40.0% | |
| ACGATTGAAGATAATCGCGT+TGG | + | chr8.4:60364692-60364711 | MS.gene92394:CDS | 40.0% | |
| ACTTCCAGAGACCAAAATGA+TGG | + | chr8.4:60364060-60364079 | MS.gene92394:intron | 40.0% | |
| AGACATATATCGCATCTTGG+AGG | + | chr8.4:60364980-60364999 | MS.gene92394:CDS | 40.0% | |
| AGATATTGCAGGAGTTGCAA+AGG | + | chr8.4:60364221-60364240 | MS.gene92394:CDS | 40.0% | |
| AGCGTTACACTCATTCCATA+CGG | + | chr8.4:60365018-60365037 | MS.gene92394:CDS | 40.0% | |
| ATGGAATGAGTGTAACGCTT+GGG | - | chr8.4:60365017-60365036 | None:intergenic | 40.0% | |
| CAACTCACAAATACACCCTA+AGG | - | chr8.4:60365306-60365325 | None:intergenic | 40.0% | |
| CGATTGAAGATAATCGCGTT+GGG | + | chr8.4:60364693-60364712 | MS.gene92394:CDS | 40.0% | |
| CTTTACGCACAAATCTTCCA+AGG | + | chr8.4:60363147-60363166 | MS.gene92394:CDS | 40.0% | |
| GAAGATTTGTGCGTAAAGAG+TGG | - | chr8.4:60363145-60363164 | None:intergenic | 40.0% | |
| GACTCATTTCCAGCTCTATA+AGG | + | chr8.4:60365695-60365714 | MS.gene92394:intron | 40.0% | |
| GGTATGAAGTTGGAAAATGC+TGG | + | chr8.4:60364282-60364301 | MS.gene92394:CDS | 40.0% | |
| GGTCAAAATAGAGTCCCTTA+GGG | + | chr8.4:60365288-60365307 | MS.gene92394:intron | 40.0% | |
| GTAGTGAAAGTTGAGAGGAA+AGG | + | chr8.4:60363317-60363336 | MS.gene92394:CDS | 40.0% | |
| GTTCCGAACTATTATCGAGT+TGG | - | chr8.4:60365526-60365545 | None:intergenic | 40.0% | |
| GTTGTGATCTTAATTGGGCT+AGG | + | chr8.4:60364174-60364193 | MS.gene92394:CDS | 40.0% | |
| TAGAAATAGTTTCCTGGCCA+CGG | - | chr8.4:60364869-60364888 | None:intergenic | 40.0% | |
| TAGTTTCGAGGAAAGGAATG+TGG | - | chr8.4:60364661-60364680 | None:intergenic | 40.0% | |
| TATGGAATGAGTGTAACGCT+TGG | - | chr8.4:60365018-60365037 | None:intergenic | 40.0% | |
| TGAAAGTTGAGAGGAAAGGA+GGG | + | chr8.4:60363321-60363340 | MS.gene92394:CDS | 40.0% | |
| TGACTACAAACAATGGCTAG+CGG | + | chr8.4:60366128-60366147 | MS.gene92394:CDS | 40.0% | |
| TGGGTCTATACTAAGAGGAT+CGG | - | chr8.4:60363093-60363112 | None:intergenic | 40.0% | |
| TGGTCAAAATAGAGTCCCTT+AGG | + | chr8.4:60365287-60365306 | MS.gene92394:intron | 40.0% | |
| ! | AAGAATCCCATGATTTGCCT+TGG | - | chr8.4:60363167-60363186 | None:intergenic | 40.0% |
| ! | AGGATTTTGCTGGTGAGTTT+GGG | + | chr8.4:60363264-60363283 | MS.gene92394:CDS | 40.0% |
| ! | GTTCCTGGTGTTGAAAACTT+TGG | + | chr8.4:60363449-60363468 | MS.gene92394:CDS | 40.0% |
| ! | TGTGAACTGTTTCTCTGGTT+GGG | - | chr8.4:60363112-60363131 | None:intergenic | 40.0% |
| !! | CAAACCATCATTTTGGTCTC+TGG | - | chr8.4:60364067-60364086 | None:intergenic | 40.0% |
| !! | GAGTCAAGAAGTGTTTGAAG+CGG | + | chr8.4:60363382-60363401 | MS.gene92394:CDS | 40.0% |
| !! | TGTGTGTTCAGGTCATTTTG+TGG | + | chr8.4:60363409-60363428 | MS.gene92394:CDS | 40.0% |
| !!! | CGTTTTTTGGAGGATTTTGC+TGG | + | chr8.4:60363254-60363273 | MS.gene92394:CDS | 40.0% |
| AAATACCTGAAACGGCCGTA+TGG | - | chr8.4:60365036-60365055 | None:intergenic | 45.0% | |
| AGGATTCTCGCTTGGACAAA+GGG | - | chr8.4:60363196-60363215 | None:intergenic | 45.0% | |
| CTGGTTGGGTCTATACTAAG+AGG | - | chr8.4:60363098-60363117 | None:intergenic | 45.0% | |
| GAAGCGGTTATTGTGTGTTC+AGG | + | chr8.4:60363398-60363417 | MS.gene92394:CDS | 45.0% | |
| GACGACGTGTACTAATGAGA+AGG | - | chr8.4:60363933-60363952 | None:intergenic | 45.0% | |
| GTCAGGCTGACTACAAACAA+TGG | + | chr8.4:60366121-60366140 | MS.gene92394:intron | 45.0% | |
| GTGAAAGTTGAGAGGAAAGG+AGG | + | chr8.4:60363320-60363339 | MS.gene92394:CDS | 45.0% | |
| TAAAACTCTGGCAACCCACT+TGG | - | chr8.4:60364910-60364929 | None:intergenic | 45.0% | |
| TCACTACCTCCGCTTCAAAT+CGG | - | chr8.4:60363304-60363323 | None:intergenic | 45.0% | |
| TCCATCCAATCTTCTAACGG+AGG | - | chr8.4:60366168-60366187 | None:intergenic | 45.0% | |
| TCCTCACTCTTTCAAAGACC+AGG | + | chr8.4:60363505-60363524 | MS.gene92394:CDS | 45.0% | |
| ! | ACATGTTTTTCCTCCTTCGC+TGG | + | chr8.4:60364727-60364746 | MS.gene92394:CDS | 45.0% |
| ! | ACCTGGTCTTTGAAAGAGTG+AGG | - | chr8.4:60363509-60363528 | None:intergenic | 45.0% |
| ! | ACTGCTGTGAACTGTTTCTC+TGG | - | chr8.4:60363117-60363136 | None:intergenic | 45.0% |
| ! | AGAGGATCGGAGTCTGTTTT+TGG | - | chr8.4:60363080-60363099 | None:intergenic | 45.0% |
| ! | CCACCAAAGTTTTCAACACC+AGG | - | chr8.4:60363455-60363474 | None:intergenic | 45.0% |
| ! | CCTGGTGTTGAAAACTTTGG+TGG | + | chr8.4:60363452-60363471 | MS.gene92394:CDS | 45.0% |
| ! | CGAAGCATTTCTTCATGACC+CGG | - | chr8.4:60363236-60363255 | None:intergenic | 45.0% |
| ! | CTGTGAACTGTTTCTCTGGT+TGG | - | chr8.4:60363113-60363132 | None:intergenic | 45.0% |
| ! | GAGGATTTTGCTGGTGAGTT+TGG | + | chr8.4:60363263-60363282 | MS.gene92394:CDS | 45.0% |
| !! | TGGGTTGCCAGAGTTTTATC+TGG | + | chr8.4:60364912-60364931 | MS.gene92394:CDS | 45.0% |
| AATGGCTAGCGGCACAGATT+GGG | + | chr8.4:60366139-60366158 | MS.gene92394:CDS | 50.0% | |
| AGTTGAGAGGAAAGGAGGGA+AGG | + | chr8.4:60363325-60363344 | MS.gene92394:CDS | 50.0% | |
| ATATCCAGGTTCCTCCAACG+CGG | - | chr8.4:60363052-60363071 | None:intergenic | 50.0% | |
| CACTACCTCCGCTTCAAATC+GGG | - | chr8.4:60363303-60363322 | None:intergenic | 50.0% | |
| CAGGATTCTCGCTTGGACAA+AGG | - | chr8.4:60363197-60363216 | None:intergenic | 50.0% | |
| CCAGGAACCAAAGCAAGTCT+CGG | - | chr8.4:60363437-60363456 | None:intergenic | 50.0% | |
| CGGAGGTAGTGAAAGTTGAG+AGG | + | chr8.4:60363312-60363331 | MS.gene92394:CDS | 50.0% | |
| CTGTGATCCGAGAACGTTTC+CGG | + | chr8.4:60363214-60363233 | MS.gene92394:CDS | 50.0% | |
| GCCTCCGTTAGAAGATTGGA+TGG | + | chr8.4:60366164-60366183 | MS.gene92394:CDS | 50.0% | |
| GCTCCATGGCTCTCTTTCAT+TGG | + | chr8.4:60364749-60364768 | MS.gene92394:CDS | 50.0% | |
| GGTTGCCTCCGTTAGAAGAT+TGG | + | chr8.4:60366160-60366179 | MS.gene92394:CDS | 50.0% | |
| TCATGACCCGGAAACGTTCT+CGG | - | chr8.4:60363224-60363243 | None:intergenic | 50.0% | |
| TCATTCCATACGGCCGTTTC+AGG | + | chr8.4:60365028-60365047 | MS.gene92394:CDS | 50.0% | |
| TCTCGAAAACGACGACGTTG+TGG | - | chr8.4:60363022-60363041 | None:intergenic | 50.0% | |
| TGTGATCCGAGAACGTTTCC+GGG | + | chr8.4:60363215-60363234 | MS.gene92394:CDS | 50.0% | |
| TTCCTGTTGTAGCTCCTTGG+CGG | - | chr8.4:60362997-60363016 | None:intergenic | 50.0% | |
| TTCGAGAAGAACAACCGCGT+TGG | + | chr8.4:60363035-60363054 | MS.gene92394:CDS | 50.0% | |
| ! | CTGGTGAGTTTGGGATACAC+GGG | + | chr8.4:60363273-60363292 | MS.gene92394:CDS | 50.0% |
| ! | GCGGTTGATGTGTGTTCTCA+TGG | + | chr8.4:60363764-60363783 | MS.gene92394:intron | 50.0% |
| ! | GCTGGTGAGTTTGGGATACA+CGG | + | chr8.4:60363272-60363291 | MS.gene92394:CDS | 50.0% |
| ! | GGCTTGGTTGCCTTTGAAGA+TGG | + | chr8.4:60364463-60364482 | MS.gene92394:CDS | 50.0% |
| ! | TGTGGAACCGAGACTTGCTT+TGG | + | chr8.4:60363427-60363446 | MS.gene92394:CDS | 50.0% |
| AAAGTTGCAGTGATCGGCGC+CGG | + | chr8.4:60362954-60362973 | MS.gene92394:CDS | 55.0% | |
| AGAGGAAAGGAGGGAAGGAG+TGG | + | chr8.4:60363330-60363349 | MS.gene92394:CDS | 55.0% | |
| AGGAGTGGGTGGTTGAGTCA+AGG | + | chr8.4:60363345-60363364 | MS.gene92394:CDS | 55.0% | |
| CAATGGCTAGCGGCACAGAT+TGG | + | chr8.4:60366138-60366157 | MS.gene92394:CDS | 55.0% | |
| CGGAAACGTTCTCGGATCAC+AGG | - | chr8.4:60363216-60363235 | None:intergenic | 55.0% | |
| CGGATCACAGGATTCTCGCT+TGG | - | chr8.4:60363204-60363223 | None:intergenic | 55.0% | |
| GAGAAGAACAACCGCGTTGG+AGG | + | chr8.4:60363038-60363057 | MS.gene92394:CDS | 55.0% | |
| GAGGAAAGGAGGGAAGGAGT+GGG | + | chr8.4:60363331-60363350 | MS.gene92394:CDS | 55.0% | |
| GAGTCGAACTCGTCTGAGCT+CGG | - | chr8.4:60365675-60365694 | None:intergenic | 55.0% | |
| GAGTGGGTGGTTGAGTCAAG+GGG | + | chr8.4:60363347-60363366 | MS.gene92394:CDS | 55.0% | |
| GCCAAGGAGCTACAACAGGA+AGG | + | chr8.4:60362996-60363015 | MS.gene92394:CDS | 55.0% | |
| GCCTTCCTGTTGTAGCTCCT+TGG | - | chr8.4:60363000-60363019 | None:intergenic | 55.0% | |
| GGAGTGGGTGGTTGAGTCAA+GGG | + | chr8.4:60363346-60363365 | MS.gene92394:CDS | 55.0% | |
| TTTCTAGACTTGCCGTGGCC+AGG | + | chr8.4:60364854-60364873 | MS.gene92394:intron | 55.0% | |
| ! | CCGAGACTTGCTTTGGTTCC+TGG | + | chr8.4:60363434-60363453 | MS.gene92394:CDS | 55.0% |
| ! | CGGGTTGACCCGATTTGAAG+CGG | + | chr8.4:60363292-60363311 | MS.gene92394:CDS | 55.0% |
| ! | GTTGACCCGATTTGAAGCGG+AGG | + | chr8.4:60363295-60363314 | MS.gene92394:CDS | 55.0% |
| ACAACCGCGTTGGAGGAACC+TGG | + | chr8.4:60363045-60363064 | MS.gene92394:CDS | 60.0% | |
| GAAAGGAGGGAAGGAGTGGG+TGG | + | chr8.4:60363334-60363353 | MS.gene92394:CDS | 60.0% | |
| TGGGTGGTTGAGTCAAGGGG+AGG | + | chr8.4:60363350-60363369 | MS.gene92394:CDS | 60.0% | |
| !! | TTCCTCCTTCGCTGGCTCCA+TGG | + | chr8.4:60364735-60364754 | MS.gene92394:CDS | 60.0% |
| AGCCATGGAGCCAGCGAAGG+AGG | - | chr8.4:60364740-60364759 | None:intergenic | 65.0% | |
| CGCCGCCAAGGAGCTACAAC+AGG | + | chr8.4:60362992-60363011 | MS.gene92394:CDS | 65.0% | |
| GAGAGCCATGGAGCCAGCGA+AGG | - | chr8.4:60364743-60364762 | None:intergenic | 65.0% | |
| GGCGATGAGGCCGGAAACTC+CGG | - | chr8.4:60362976-60362995 | None:intergenic | 65.0% | |
| GTAGCTCCTTGGCGGCGATG+AGG | - | chr8.4:60362989-60363008 | None:intergenic | 65.0% | |
| ! | GTGATCGGCGCCGGAGTTTC+CGG | + | chr8.4:60362963-60362982 | MS.gene92394:CDS | 65.0% |
| CTCCTTGGCGGCGATGAGGC+CGG | - | chr8.4:60362985-60363004 | None:intergenic | 70.0% | |
| TTCCGGCCTCATCGCCGCCA+AGG | + | chr8.4:60362980-60362999 | MS.gene92394:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 60362948 | 60366290 | 60362948 | ID=MS.gene92394 |
| chr8.4 | mRNA | 60362948 | 60366290 | 60362948 | ID=MS.gene92394.t1;Parent=MS.gene92394 |
| chr8.4 | exon | 60362948 | 60363526 | 60362948 | ID=MS.gene92394.t1.exon1;Parent=MS.gene92394.t1 |
| chr8.4 | CDS | 60362948 | 60363526 | 60362948 | ID=cds.MS.gene92394.t1;Parent=MS.gene92394.t1 |
| chr8.4 | exon | 60364174 | 60364326 | 60364174 | ID=MS.gene92394.t1.exon2;Parent=MS.gene92394.t1 |
| chr8.4 | CDS | 60364174 | 60364326 | 60364174 | ID=cds.MS.gene92394.t1;Parent=MS.gene92394.t1 |
| chr8.4 | exon | 60364442 | 60364524 | 60364442 | ID=MS.gene92394.t1.exon3;Parent=MS.gene92394.t1 |
| chr8.4 | CDS | 60364442 | 60364524 | 60364442 | ID=cds.MS.gene92394.t1;Parent=MS.gene92394.t1 |
| chr8.4 | exon | 60364649 | 60364784 | 60364649 | ID=MS.gene92394.t1.exon4;Parent=MS.gene92394.t1 |
| chr8.4 | CDS | 60364649 | 60364784 | 60364649 | ID=cds.MS.gene92394.t1;Parent=MS.gene92394.t1 |
| chr8.4 | exon | 60364876 | 60365049 | 60364876 | ID=MS.gene92394.t1.exon5;Parent=MS.gene92394.t1 |
| chr8.4 | CDS | 60364876 | 60365049 | 60364876 | ID=cds.MS.gene92394.t1;Parent=MS.gene92394.t1 |
| chr8.4 | exon | 60366126 | 60366290 | 60366126 | ID=MS.gene92394.t1.exon6;Parent=MS.gene92394.t1 |
| chr8.4 | CDS | 60366126 | 60366290 | 60366126 | ID=cds.MS.gene92394.t1;Parent=MS.gene92394.t1 |
| Gene Sequence |
| Protein sequence |
