Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92931.t1 | XP_003614114.1 | 96.1 | 583 | 18 | 2 | 1 | 583 | 1 | 578 | 9.70E-286 | 992.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92931.t1 | F4I0K2 | 61.2 | 595 | 196 | 8 | 1 | 577 | 1 | 578 | 2.5e-173 | 610.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92931.t1 | G7JY18 | 96.1 | 583 | 18 | 2 | 1 | 583 | 1 | 578 | 7.0e-286 | 992.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050099 | MS.gene92931 | 0.832668 | 8.29E-56 | -1.69E-46 |
| MS.gene052600 | MS.gene92931 | 0.80181 | 7.55E-49 | -1.69E-46 |
| MS.gene054701 | MS.gene92931 | 0.829779 | 4.25E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92931.t1 | MTR_5g044990 | 96.055 | 583 | 18 | 2 | 1 | 583 | 1 | 578 | 0.0 | 1154 |
| MS.gene92931.t1 | MTR_4g019165 | 43.590 | 390 | 190 | 5 | 193 | 565 | 81 | 457 | 9.08e-113 | 344 |
| MS.gene92931.t1 | MTR_1g076850 | 30.747 | 348 | 202 | 5 | 214 | 558 | 7 | 318 | 1.53e-49 | 174 |
| MS.gene92931.t1 | MTR_2g098950 | 32.362 | 309 | 184 | 5 | 255 | 560 | 40 | 326 | 1.95e-49 | 174 |
| MS.gene92931.t1 | MTR_4g067310 | 30.925 | 346 | 200 | 6 | 215 | 557 | 15 | 324 | 1.98e-49 | 174 |
| MS.gene92931.t1 | MTR_1g101950 | 29.651 | 344 | 205 | 5 | 215 | 555 | 23 | 332 | 1.55e-47 | 169 |
| MS.gene92931.t1 | MTR_6g089480 | 30.921 | 304 | 187 | 5 | 255 | 555 | 20 | 303 | 5.75e-47 | 167 |
| MS.gene92931.t1 | MTR_6g089480 | 31.868 | 273 | 163 | 5 | 255 | 524 | 20 | 272 | 3.50e-44 | 159 |
| MS.gene92931.t1 | MTR_6g089480 | 31.852 | 270 | 161 | 5 | 255 | 521 | 20 | 269 | 1.27e-43 | 157 |
| MS.gene92931.t1 | MTR_5g079460 | 30.925 | 346 | 199 | 8 | 214 | 555 | 66 | 375 | 2.76e-43 | 159 |
| MS.gene92931.t1 | MTR_1g057810 | 29.605 | 304 | 190 | 5 | 257 | 557 | 276 | 558 | 9.36e-38 | 147 |
| MS.gene92931.t1 | MTR_7g075860 | 28.485 | 330 | 197 | 7 | 214 | 538 | 40 | 335 | 1.08e-37 | 143 |
| MS.gene92931.t1 | MTR_1g105150 | 27.961 | 304 | 181 | 6 | 257 | 557 | 276 | 544 | 2.18e-31 | 129 |
| MS.gene92931.t1 | MTR_1g069745 | 26.230 | 305 | 188 | 8 | 255 | 555 | 9 | 280 | 1.26e-29 | 119 |
| MS.gene92931.t1 | MTR_1g069490 | 25.667 | 300 | 198 | 6 | 262 | 555 | 113 | 393 | 5.83e-28 | 116 |
| MS.gene92931.t1 | MTR_1g054730 | 30.464 | 151 | 100 | 2 | 279 | 426 | 154 | 302 | 1.23e-16 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92931.t1 | AT1G69200 | 57.815 | 595 | 216 | 9 | 1 | 577 | 1 | 578 | 0.0 | 655 |
| MS.gene92931.t1 | AT3G54090 | 43.590 | 390 | 204 | 5 | 191 | 565 | 78 | 466 | 1.69e-109 | 336 |
| MS.gene92931.t1 | AT5G51830 | 30.618 | 356 | 210 | 5 | 208 | 560 | 16 | 337 | 4.93e-51 | 179 |
| MS.gene92931.t1 | AT5G51830 | 30.618 | 356 | 210 | 5 | 208 | 560 | 16 | 337 | 4.93e-51 | 179 |
| MS.gene92931.t1 | AT2G31390 | 33.887 | 301 | 174 | 5 | 255 | 552 | 35 | 313 | 3.37e-50 | 176 |
| MS.gene92931.t1 | AT3G59480 | 31.715 | 309 | 186 | 5 | 255 | 560 | 36 | 322 | 3.81e-49 | 174 |
| MS.gene92931.t1 | AT4G10260 | 30.857 | 350 | 203 | 6 | 214 | 560 | 5 | 318 | 1.13e-47 | 169 |
| MS.gene92931.t1 | AT1G06030 | 30.409 | 342 | 197 | 6 | 215 | 552 | 11 | 315 | 3.80e-47 | 168 |
| MS.gene92931.t1 | AT1G06020 | 32.119 | 302 | 178 | 6 | 255 | 552 | 36 | 314 | 9.55e-47 | 167 |
| MS.gene92931.t1 | AT1G66430 | 30.145 | 345 | 203 | 7 | 214 | 555 | 64 | 373 | 7.74e-46 | 166 |
Find 134 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAGATTGCAAAGCATTT+TGG | 0.178739 | 5.1:+33532251 | MS.gene92931:CDS |
| CGGTCAGCATTGATAGTAAA+AGG | 0.213176 | 5.1:+33530954 | MS.gene92931:CDS |
| CCTCCTCTTGTTTGTTGCTT+TGG | 0.218528 | 5.1:+33530677 | MS.gene92931:CDS |
| TCACAAGTGAAAGGGGTAAT+TGG | 0.224197 | 5.1:-33532599 | None:intergenic |
| TCTTCTTTATTCTCCTCTTT+AGG | 0.238219 | 5.1:-33530503 | None:intergenic |
| TTCATCTATGTCACCGATTT+CGG | 0.241991 | 5.1:-33530561 | None:intergenic |
| GTCTTTGCCGACACCTTCTT+AGG | 0.301654 | 5.1:-33530171 | None:intergenic |
| TGCATCTAGTTCTGCTGCTT+TGG | 0.313717 | 5.1:+33530430 | MS.gene92931:CDS |
| GAGAAATTTGTTAGGGCTCC+TGG | 0.317093 | 5.1:+33530797 | MS.gene92931:CDS |
| GGAAGAAGAGAAAGAAGTTA+AGG | 0.324640 | 5.1:+33530451 | MS.gene92931:CDS |
| CTCAAAATTCAGTGTAAATC+TGG | 0.327725 | 5.1:+33530045 | MS.gene92931:CDS |
| CCTTTATCAGTTATCAAATC+AGG | 0.336586 | 5.1:-33533187 | None:intergenic |
| CCTGATTTGATAACTGATAA+AGG | 0.337736 | 5.1:+33533187 | MS.gene92931:CDS |
| CACAAGTGAAAGGGGTAATT+GGG | 0.339476 | 5.1:-33532598 | None:intergenic |
| GACATTACTCCTGACCCTTA+TGG | 0.367773 | 5.1:+33533310 | MS.gene92931:CDS |
| AAACTTGCAGATGATGAATA+TGG | 0.370202 | 5.1:+33530884 | MS.gene92931:CDS |
| TATCACCTGGTTCAACTAAC+TGG | 0.371257 | 5.1:-33533376 | None:intergenic |
| CACTGATGAAGATTGGTAAA+AGG | 0.375060 | 5.1:+33530990 | MS.gene92931:CDS |
| GGAGCCCTGAGAAATTTGTT+AGG | 0.379308 | 5.1:+33530789 | MS.gene92931:CDS |
| CATAGTGGTGCAACTACTTC+AGG | 0.392247 | 5.1:-33532476 | None:intergenic |
| TCTGGAGACGGCATTGTTGC+AGG | 0.393744 | 5.1:+33532632 | MS.gene92931:CDS |
| AGAAATTTGTTAGGGCTCCT+GGG | 0.394154 | 5.1:+33530798 | MS.gene92931:CDS |
| AACAAATCAATTGTCCCTTC+TGG | 0.394435 | 5.1:-33530222 | None:intergenic |
| AGAAGGGACAATTGATTTGT+TGG | 0.395531 | 5.1:+33530224 | MS.gene92931:CDS |
| TAAACCTTCCTATGCCACTA+TGG | 0.397175 | 5.1:+33532294 | MS.gene92931:CDS |
| ACTATGGCATGAAAATCTTA+AGG | 0.402957 | 5.1:+33532493 | MS.gene92931:CDS |
| CTCACTTTCTTCCACTTCCC+AGG | 0.409532 | 5.1:+33529690 | MS.gene92931:CDS |
| GGAGCCCTAACAAATTTCTC+AGG | 0.414232 | 5.1:-33530794 | None:intergenic |
| ACTTGTGACATGTCAGCATC+TGG | 0.417881 | 5.1:+33532614 | MS.gene92931:CDS |
| CTGAAGTAGTTGCACCACTA+TGG | 0.424724 | 5.1:+33532477 | MS.gene92931:CDS |
| TCTATGAACGTAGTTCAACT+TGG | 0.431744 | 5.1:+33530018 | MS.gene92931:CDS |
| GATAGTGCTTCTATTGTAGA+AGG | 0.432468 | 5.1:+33530255 | MS.gene92931:CDS |
| GGATGAGACTGACGATGGTT+TGG | 0.435291 | 5.1:+33530607 | MS.gene92931:CDS |
| CTTCAGGTAGGCCTGCCAAT+AGG | 0.463718 | 5.1:+33530723 | MS.gene92931:CDS |
| AGCTCGATGGTGCTGTTAGC+GGG | 0.465873 | 5.1:+33532564 | MS.gene92931:CDS |
| ACTATCAATGCTGACCGATC+GGG | 0.466215 | 5.1:-33530948 | None:intergenic |
| TACTATCAATGCTGACCGAT+CGG | 0.468391 | 5.1:-33530949 | None:intergenic |
| GACTGACGATGGTTTGGATC+TGG | 0.473146 | 5.1:+33530613 | MS.gene92931:CDS |
| TTCATGATCTATAAGCCTAT+TGG | 0.479296 | 5.1:-33530738 | None:intergenic |
| TGTGGTGTAGTAATGTATCT+TGG | 0.479747 | 5.1:-33532540 | None:intergenic |
| GCCATTGCTCTTGCTAGTCT+AGG | 0.481898 | 5.1:+33530839 | MS.gene92931:CDS |
| TTGGTGTCAAATTCTTCAGA+TGG | 0.483845 | 5.1:-33532419 | None:intergenic |
| GGGCATCCTTCATTCTTTCG+TGG | 0.485958 | 5.1:-33530763 | None:intergenic |
| CTATGAACGTAGTTCAACTT+GGG | 0.491056 | 5.1:+33530019 | MS.gene92931:CDS |
| TGTCAAACAATCTTCAGCAC+AGG | 0.492667 | 5.1:-33531038 | None:intergenic |
| ATCAAGTATGCAATTGATTG+TGG | 0.493118 | 5.1:+33533226 | MS.gene92931:CDS |
| GGCCCATCTCCCTCTGATGA+TGG | 0.494492 | 5.1:+33530276 | MS.gene92931:CDS |
| GAGCCCTGAGAAATTTGTTA+GGG | 0.499725 | 5.1:+33530790 | MS.gene92931:CDS |
| GGTGGTGGTGAAGCCGAAAT+CGG | 0.500614 | 5.1:+33530548 | MS.gene92931:CDS |
| TAAGGCATCTAAACCTAAGA+AGG | 0.501445 | 5.1:+33530158 | MS.gene92931:CDS |
| AACCATCATCAGAGGGAGAT+GGG | 0.509553 | 5.1:-33530278 | None:intergenic |
| TCAAGTATGCAATTGATTGT+GGG | 0.509821 | 5.1:+33533227 | MS.gene92931:CDS |
| GGTGTCTCACTGATGAAGAT+TGG | 0.511624 | 5.1:+33530983 | MS.gene92931:CDS |
| AAAGAATGAAGGATGCCCTC+TGG | 0.513107 | 5.1:+33530768 | MS.gene92931:CDS |
| AGTACGCGGCTTTCCTCCAC+AGG | 0.514235 | 5.1:+33533276 | MS.gene92931:CDS |
| ATTGATAGTAAAAGGGCTAC+AGG | 0.515434 | 5.1:+33530962 | MS.gene92931:CDS |
| GAAATTTGTTAGGGCTCCTG+GGG | 0.518314 | 5.1:+33530799 | MS.gene92931:CDS |
| GATAAAGGGTACCTGGGAAG+TGG | 0.519562 | 5.1:-33529701 | None:intergenic |
| GAACCATCATCAGAGGGAGA+TGG | 0.523484 | 5.1:-33530279 | None:intergenic |
| CTGACATGTCACAAGTGAAA+GGG | 0.524494 | 5.1:-33532607 | None:intergenic |
| TCTTCCTGAGAGTGCCATAG+TGG | 0.525516 | 5.1:-33532308 | None:intergenic |
| TATGCCACTATGGCACTCTC+AGG | 0.527107 | 5.1:+33532304 | MS.gene92931:CDS |
| CTTTCCTCCACAGGAAGATA+CGG | 0.528005 | 5.1:+33533285 | MS.gene92931:CDS |
| CATACTTGATGCTATGCTCT+AGG | 0.530128 | 5.1:-33533213 | None:intergenic |
| CAACTACTTCAGGTTCGTAA+TGG | 0.531970 | 5.1:-33532466 | None:intergenic |
| CGATGGTGCTGTTAGCGGGA+TGG | 0.537947 | 5.1:+33532568 | MS.gene92931:CDS |
| ATTGTGGGGTAATAGATCAA+TGG | 0.539254 | 5.1:+33533242 | MS.gene92931:CDS |
| AATTGTCCCTTCTGGAGACT+CGG | 0.539534 | 5.1:-33530214 | None:intergenic |
| TCTTGCTAGTCTAGGTGGCA+AGG | 0.541756 | 5.1:+33530847 | MS.gene92931:CDS |
| TTCTTAGAACCATCATCAGA+GGG | 0.544165 | 5.1:-33530285 | None:intergenic |
| TGAGAGTGCCATAGTGGCAT+AGG | 0.545969 | 5.1:-33532302 | None:intergenic |
| TGGATCTCATGTGACGATCA+AGG | 0.546279 | 5.1:-33532214 | None:intergenic |
| GTAATAGATCAATGGATACT+TGG | 0.547151 | 5.1:+33533250 | MS.gene92931:CDS |
| AAATATTGACGTGTTGAAAG+AGG | 0.554016 | 5.1:+33531072 | MS.gene92931:CDS |
| TGAACTCCACGAAAGAATGA+AGG | 0.555890 | 5.1:+33530757 | MS.gene92931:CDS |
| ACCTTCCTTTACTGAAAATG+TGG | 0.566495 | 5.1:+33530583 | MS.gene92931:CDS |
| GGTCAGCATTGATAGTAAAA+GGG | 0.566795 | 5.1:+33530955 | MS.gene92931:CDS |
| GAGCTCGATGGTGCTGTTAG+CGG | 0.567047 | 5.1:+33532563 | MS.gene92931:CDS |
| AAGAGCAATGGCAACACTAC+CGG | 0.568293 | 5.1:-33530828 | None:intergenic |
| TGGATACTTGGTCGAGTACG+CGG | 0.574750 | 5.1:+33533262 | MS.gene92931:CDS |
| CTTCTTAGAACCATCATCAG+AGG | 0.575229 | 5.1:-33530286 | None:intergenic |
| AAGTGGAAGAAAGTGAGCAA+GGG | 0.575285 | 5.1:-33529684 | None:intergenic |
| GCTGACATGTCACAAGTGAA+AGG | 0.578198 | 5.1:-33532608 | None:intergenic |
| TGTGCAGGTGTAACTTGACT+TGG | 0.580944 | 5.1:+33529980 | MS.gene92931:intron |
| TTCCTTTACTGAAAATGTGG+AGG | 0.582891 | 5.1:+33530586 | MS.gene92931:CDS |
| TGATCTATAAGCCTATTGGC+AGG | 0.586380 | 5.1:-33530734 | None:intergenic |
| CTTGATAGCTCGCAATGTCG+TGG | 0.596642 | 5.1:-33532234 | None:intergenic |
| GTCAAACAATCTTCAGCACA+GGG | 0.597382 | 5.1:-33531037 | None:intergenic |
| AGACGTTCGTTCAGCAAGTG+TGG | 0.597817 | 5.1:+33532336 | MS.gene92931:CDS |
| CCAAAGCAACAAACAAGAGG+AGG | 0.601556 | 5.1:-33530677 | None:intergenic |
| CTGGTCATGTTGCAATGGCT+AGG | 0.601708 | 5.1:+33530064 | MS.gene92931:CDS |
| TCGAAAGCCGAGTCTCCAGA+AGG | 0.601773 | 5.1:+33530207 | MS.gene92931:CDS |
| CAAGTATGCAATTGATTGTG+GGG | 0.603065 | 5.1:+33533228 | MS.gene92931:CDS |
| GACATGTCAGCATCTGGAGA+CGG | 0.603398 | 5.1:+33532620 | MS.gene92931:CDS |
| GCTAGGAAGAAAGCTTCACT+AGG | 0.607054 | 5.1:+33530081 | MS.gene92931:CDS |
| GCAAGGGAAAGAGACGACAT+TGG | 0.610392 | 5.1:-33529668 | None:intergenic |
| ATCTAAACCTAAGAAGGTGT+CGG | 0.614511 | 5.1:+33530164 | MS.gene92931:CDS |
| TCTCATGTGACGATCAAGGA+GGG | 0.616712 | 5.1:-33532210 | None:intergenic |
| ATTGCTCTTGCTAGTCTAGG+TGG | 0.617176 | 5.1:+33530842 | MS.gene92931:CDS |
| AAGGCGAAGGAAACCTAAAG+AGG | 0.620452 | 5.1:+33530490 | MS.gene92931:CDS |
| TAGTGAAAATGAACCTGTGG+TGG | 0.621542 | 5.1:+33530122 | MS.gene92931:CDS |
| AAATTTCTCAGGGCTCCAGA+GGG | 0.621942 | 5.1:-33530783 | None:intergenic |
| CAAATTTCTCAGGGCTCCAG+AGG | 0.624526 | 5.1:-33530784 | None:intergenic |
| ACCTAGACTAGCAAGAGCAA+TGG | 0.625002 | 5.1:-33530840 | None:intergenic |
| CTATTGGCAGGCCTACCTGA+AGG | 0.625259 | 5.1:-33530722 | None:intergenic |
| GAGCCCTAACAAATTTCTCA+GGG | 0.627364 | 5.1:-33530793 | None:intergenic |
| GAAGTGGAAGAAAGTGAGCA+AGG | 0.632203 | 5.1:-33529685 | None:intergenic |
| CGAAAGCCGAGTCTCCAGAA+GGG | 0.633282 | 5.1:+33530208 | MS.gene92931:CDS |
| ATGTCCTCCGTATCTTCCTG+TGG | 0.633557 | 5.1:-33533292 | None:intergenic |
| GTAATGGACAAACTTTGACC+TGG | 0.633703 | 5.1:-33532450 | None:intergenic |
| GCTCCAAAGCAACAAACAAG+AGG | 0.633915 | 5.1:-33530680 | None:intergenic |
| AGTGCCATAGTGGCATAGGA+AGG | 0.633942 | 5.1:-33532298 | None:intergenic |
| ACAAGTGAAAGGGGTAATTG+GGG | 0.635252 | 5.1:-33532597 | None:intergenic |
| CAGATGGTGTTATTCCGCAT+AGG | 0.638990 | 5.1:-33532403 | None:intergenic |
| TATGAACGTAGTTCAACTTG+GGG | 0.642217 | 5.1:+33530020 | MS.gene92931:CDS |
| CGATTACAGAAACAGAGTAT+CGG | 0.647080 | 5.1:+33533341 | MS.gene92931:CDS |
| TCCTCCGTATCTTCCTGTGG+AGG | 0.647479 | 5.1:-33533289 | None:intergenic |
| TAAATCTGGTCATGTTGCAA+TGG | 0.648584 | 5.1:+33530059 | MS.gene92931:CDS |
| TGACATGTCACAAGTGAAAG+GGG | 0.650172 | 5.1:-33532606 | None:intergenic |
| TGGTGCTGTTAGCGGGATGG+AGG | 0.653175 | 5.1:+33532571 | MS.gene92931:CDS |
| ACATAAGCGATACCTACGGT+TGG | 0.654614 | 5.1:+33530654 | MS.gene92931:CDS |
| AAATTTGTTAGGGCTCCTGG+GGG | 0.655673 | 5.1:+33530800 | MS.gene92931:CDS |
| AAATAATGTTCAAACCCGAT+CGG | 0.661932 | 5.1:+33530934 | MS.gene92931:CDS |
| TACTACACCACAGAGCTCGA+TGG | 0.665232 | 5.1:+33532551 | MS.gene92931:CDS |
| GCCTAGTGAAAATGAACCTG+TGG | 0.674022 | 5.1:+33530119 | MS.gene92931:CDS |
| TCCTCCACAGGAAGATACGG+AGG | 0.688149 | 5.1:+33533288 | MS.gene92931:CDS |
| AACAAGAGGAGGCCAACCGT+AGG | 0.689957 | 5.1:-33530666 | None:intergenic |
| GAAGACATAAGCGATACCTA+CGG | 0.698661 | 5.1:+33530650 | MS.gene92931:CDS |
| AACAGCACCATCGAGCTCTG+TGG | 0.705418 | 5.1:-33532558 | None:intergenic |
| ATGAACGTAGTTCAACTTGG+GGG | 0.712399 | 5.1:+33530021 | MS.gene92931:CDS |
| ATGGTTCTAAGAAGAAAACA+CGG | 0.714612 | 5.1:+33530295 | MS.gene92931:CDS |
| ATCTCATGTGACGATCAAGG+AGG | 0.724742 | 5.1:-33532211 | None:intergenic |
| CAAGAACTAGAGTTCCTATG+CGG | 0.738277 | 5.1:+33532389 | MS.gene92931:CDS |
| GTGGAGGATGAGACTGACGA+TGG | 0.806142 | 5.1:+33530602 | MS.gene92931:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAATTCTTCTATAA+AGG | + | chr5.1:33529835-33529854 | MS.gene92931:intron | 10.0% |
| !! | AAATTAGTAGTATTATAATA+AGG | + | chr5.1:33531498-33531517 | MS.gene92931:intron | 10.0% |
| !! | AATTAGTAGTATTATAATAA+GGG | + | chr5.1:33531499-33531518 | MS.gene92931:intron | 10.0% |
| !! | ATTTGATTAAAAATCAAAAT+TGG | - | chr5.1:33529783-33529802 | None:intergenic | 10.0% |
| !! | CACATATATATTAAAAAAAT+AGG | + | chr5.1:33531385-33531404 | MS.gene92931:intron | 10.0% |
| !!! | AATTTTGATTTTTAATCAAA+TGG | + | chr5.1:33529782-33529801 | MS.gene92931:intron | 10.0% |
| !!! | ATTTTGATTTTTAATCAAAT+GGG | + | chr5.1:33529783-33529802 | MS.gene92931:intron | 10.0% |
| !! | ATAGATTTCAAGAAAAAAAT+AGG | - | chr5.1:33531880-33531899 | None:intergenic | 15.0% |
| !! | ATATATGAGATGATAAATTA+GGG | - | chr5.1:33531478-33531497 | None:intergenic | 15.0% |
| !! | ATTAGTAGTATTATAATAAG+GGG | + | chr5.1:33531500-33531519 | MS.gene92931:intron | 15.0% |
| !! | ATTTCAACATTATTTAACAA+GGG | - | chr5.1:33532721-33532740 | None:intergenic | 15.0% |
| !! | TAGATTTCAAGAAAAAAATA+GGG | - | chr5.1:33531879-33531898 | None:intergenic | 15.0% |
| !! | TATATATGAGATGATAAATT+AGG | - | chr5.1:33531479-33531498 | None:intergenic | 15.0% |
| !!! | AATATAATTTTAGAGGATAA+AGG | + | chr5.1:33530527-33530546 | MS.gene92931:CDS | 15.0% |
| !!! | ATGTATCTATTAATTTGAAA+TGG | + | chr5.1:33531545-33531564 | MS.gene92931:intron | 15.0% |
| !!! | TGTATCTATTAATTTGAAAT+GGG | + | chr5.1:33531546-33531565 | MS.gene92931:intron | 15.0% |
| !! | AAGAATCATTTAATATGTGA+TGG | + | chr5.1:33532762-33532781 | MS.gene92931:intron | 20.0% |
| !! | AATCCATTTGAAAAACATAA+AGG | + | chr5.1:33532692-33532711 | MS.gene92931:intron | 20.0% |
| !! | ATATATGTGAAAATGATGAA+AGG | - | chr5.1:33531374-33531393 | None:intergenic | 20.0% |
| !! | GATTTCAACATTATTTAACA+AGG | - | chr5.1:33532722-33532741 | None:intergenic | 20.0% |
| !! | TACTTAACAGTTAACATATA+AGG | + | chr5.1:33532024-33532043 | MS.gene92931:intron | 20.0% |
| !! | TTAATAGACTCAATAACATT+TGG | - | chr5.1:33532145-33532164 | None:intergenic | 20.0% |
| !!! | AGAAGAGAATATAATTTTAG+AGG | + | chr5.1:33530520-33530539 | MS.gene92931:CDS | 20.0% |
| !!! | ATTATAATAAGGGGTATATT+TGG | + | chr5.1:33531509-33531528 | MS.gene92931:intron | 20.0% |
| !!! | ATTTTTGCTATCTTATTTTC+TGG | + | chr5.1:33532844-33532863 | MS.gene92931:intron | 20.0% |
| !!! | TTTATGTTTTTCAAATGGAT+TGG | - | chr5.1:33532693-33532712 | None:intergenic | 20.0% |
| !!! | TTTCCTTTATGTTTTTCAAA+TGG | - | chr5.1:33532698-33532717 | None:intergenic | 20.0% |
| !!! | TTTCCTTTCATAGTAATTTT+AGG | + | chr5.1:33532941-33532960 | MS.gene92931:intron | 20.0% |
| !!! | TTTTTAAGACTACAGATAAA+GGG | - | chr5.1:33529718-33529737 | None:intergenic | 20.0% |
| !!! | TTTTTTAAGACTACAGATAA+AGG | - | chr5.1:33529719-33529738 | None:intergenic | 20.0% |
| ! | AATGATTCTTCTCATAATAG+TGG | - | chr5.1:33532752-33532771 | None:intergenic | 25.0% |
| ! | ATGATTCTTCTCATAATAGT+GGG | - | chr5.1:33532751-33532770 | None:intergenic | 25.0% |
| ! | ATGCATACATTTAAGCAAAA+AGG | + | chr5.1:33531692-33531711 | MS.gene92931:intron | 25.0% |
| ! | CAAATGATTATTGTGTGAAA+GGG | - | chr5.1:33531819-33531838 | None:intergenic | 25.0% |
| ! | CTAAGATGTGCTTATAATTA+GGG | + | chr5.1:33531597-33531616 | MS.gene92931:intron | 25.0% |
| ! | TAAGATGTGCTTATAATTAG+GGG | + | chr5.1:33531598-33531617 | MS.gene92931:intron | 25.0% |
| ! | TAGACACATTTGTATACAAA+AGG | - | chr5.1:33531454-33531473 | None:intergenic | 25.0% |
| ! | TCTCCTAAAATTACTATGAA+AGG | - | chr5.1:33532947-33532966 | None:intergenic | 25.0% |
| !! | AACATGAATGATTTTGTAGA+TGG | + | chr5.1:33531719-33531738 | MS.gene92931:intron | 25.0% |
| !! | TCTAAGATGTGCTTATAATT+AGG | + | chr5.1:33531596-33531615 | MS.gene92931:intron | 25.0% |
| !! | TTCACTAAATAGCTTAGTTT+TGG | - | chr5.1:33531770-33531789 | None:intergenic | 25.0% |
| !! | TTGTTAGAATGATGATGAAA+GGG | - | chr5.1:33531286-33531305 | None:intergenic | 25.0% |
| !! | TTTGTTAGAATGATGATGAA+AGG | - | chr5.1:33531287-33531306 | None:intergenic | 25.0% |
| !! | TTTTAGTAACATACACAGAA+TGG | - | chr5.1:33531428-33531447 | None:intergenic | 25.0% |
| !!! | AATTTTGAAGTGAGTATGTT+GGG | + | chr5.1:33529873-33529892 | MS.gene92931:intron | 25.0% |
| !!! | ATAATTTTAGAGGATAAAGG+TGG | + | chr5.1:33530530-33530549 | MS.gene92931:CDS | 25.0% |
| !!! | TAATCGATTTTATGCCATAA+GGG | - | chr5.1:33533327-33533346 | None:intergenic | 25.0% |
| !!! | TCACTAAATAGCTTAGTTTT+GGG | - | chr5.1:33531769-33531788 | None:intergenic | 25.0% |
| AAACCAAAAAGTAATGCTGT+TGG | + | chr5.1:33531978-33531997 | MS.gene92931:intron | 30.0% | |
| AAACTTGCAGATGATGAATA+TGG | + | chr5.1:33530884-33530903 | MS.gene92931:CDS | 30.0% | |
| AAATAATGTTCAAACCCGAT+CGG | + | chr5.1:33530934-33530953 | MS.gene92931:CDS | 30.0% | |
| AAATATTGACGTGTTGAAAG+AGG | + | chr5.1:33531072-33531091 | MS.gene92931:CDS | 30.0% | |
| ACTATGGCATGAAAATCTTA+AGG | + | chr5.1:33532493-33532512 | MS.gene92931:CDS | 30.0% | |
| AGACAATATCACGATTGAAT+CGG | + | chr5.1:33532964-33532983 | MS.gene92931:intron | 30.0% | |
| AGGAAGTGAAAAAAGTTACA+AGG | + | chr5.1:33530471-33530490 | MS.gene92931:CDS | 30.0% | |
| ATATGTTCTAGTCTCATCAT+TGG | + | chr5.1:33531162-33531181 | MS.gene92931:intron | 30.0% | |
| ATCAAGTATGCAATTGATTG+TGG | + | chr5.1:33533226-33533245 | MS.gene92931:CDS | 30.0% | |
| CCAAATGATTATTGTGTGAA+AGG | - | chr5.1:33531820-33531839 | None:intergenic | 30.0% | |
| CCTTTATCAGTTATCAAATC+AGG | - | chr5.1:33533190-33533209 | None:intergenic | 30.0% | |
| CCTTTCACACAATAATCATT+TGG | + | chr5.1:33531817-33531836 | MS.gene92931:intron | 30.0% | |
| CTATCATTTGTTTAGAAACG+TGG | + | chr5.1:33531896-33531915 | MS.gene92931:intron | 30.0% | |
| CTCAAAATTCAGTGTAAATC+TGG | + | chr5.1:33530045-33530064 | MS.gene92931:CDS | 30.0% | |
| CTTTGTTGAATTGCTTCATA+AGG | - | chr5.1:33532795-33532814 | None:intergenic | 30.0% | |
| GTAATAGATCAATGGATACT+TGG | + | chr5.1:33533250-33533269 | MS.gene92931:CDS | 30.0% | |
| GTGTTAGTTAAACGTTGATA+TGG | + | chr5.1:33530399-33530418 | MS.gene92931:intron | 30.0% | |
| TCAAGTATGCAATTGATTGT+GGG | + | chr5.1:33533227-33533246 | MS.gene92931:CDS | 30.0% | |
| TCTTCTTTATTCTCCTCTTT+AGG | - | chr5.1:33530506-33530525 | None:intergenic | 30.0% | |
| TTAGTGTATAATTCTTGTGC+TGG | + | chr5.1:33529923-33529942 | MS.gene92931:intron | 30.0% | |
| TTCATGATCTATAAGCCTAT+TGG | - | chr5.1:33530741-33530760 | None:intergenic | 30.0% | |
| TTGATTGTATGTCAGATTCT+CGG | + | chr5.1:33532056-33532075 | MS.gene92931:intron | 30.0% | |
| TTGGATCTGGAAAAATATGA+CGG | + | chr5.1:33530626-33530645 | MS.gene92931:CDS | 30.0% | |
| ! | CCTGATTTGATAACTGATAA+AGG | + | chr5.1:33533187-33533206 | MS.gene92931:CDS | 30.0% |
| ! | TTAAGATTTTCATGCCATAG+TGG | - | chr5.1:33532494-33532513 | None:intergenic | 30.0% |
| !! | ATCAAGATTGCAAAGCATTT+TGG | + | chr5.1:33532251-33532270 | MS.gene92931:CDS | 30.0% |
| !! | ATGGTTCTAAGAAGAAAACA+CGG | + | chr5.1:33530295-33530314 | MS.gene92931:CDS | 30.0% |
| !! | GTAATCGATTTTATGCCATA+AGG | - | chr5.1:33533328-33533347 | None:intergenic | 30.0% |
| !!! | AAGGTTTTGTTTGTGACTAA+TGG | + | chr5.1:33532512-33532531 | MS.gene92931:CDS | 30.0% |
| !!! | CAATTTTGAAGTGAGTATGT+TGG | + | chr5.1:33529872-33529891 | MS.gene92931:intron | 30.0% |
| !!! | CAGCATTACTTTTTGGTTTA+TGG | - | chr5.1:33531977-33531996 | None:intergenic | 30.0% |
| AACAAATCAATTGTCCCTTC+TGG | - | chr5.1:33530225-33530244 | None:intergenic | 35.0% | |
| AACGATGTTGTCTATTGCAA+TGG | + | chr5.1:33531638-33531657 | MS.gene92931:intron | 35.0% | |
| AAGGAGCTTATGAATAGAGA+TGG | - | chr5.1:33531355-33531374 | None:intergenic | 35.0% | |
| ACCTTCCTTTACTGAAAATG+TGG | + | chr5.1:33530583-33530602 | MS.gene92931:CDS | 35.0% | |
| ATTAAGAACACATCTCATGC+AGG | + | chr5.1:33532160-33532179 | MS.gene92931:intron | 35.0% | |
| ATTGTGGGGTAATAGATCAA+TGG | + | chr5.1:33533242-33533261 | MS.gene92931:CDS | 35.0% | |
| CAAGTATGCAATTGATTGTG+GGG | + | chr5.1:33533228-33533247 | MS.gene92931:CDS | 35.0% | |
| CACTGATGAAGATTGGTAAA+AGG | + | chr5.1:33530990-33531009 | MS.gene92931:CDS | 35.0% | |
| CGATTACAGAAACAGAGTAT+CGG | + | chr5.1:33533341-33533360 | MS.gene92931:CDS | 35.0% | |
| CTATGAACGTAGTTCAACTT+GGG | + | chr5.1:33530019-33530038 | MS.gene92931:CDS | 35.0% | |
| GAAGCAATTCAACAAAGTAC+TGG | + | chr5.1:33532798-33532817 | MS.gene92931:intron | 35.0% | |
| GATAGTGCTTCTATTGTAGA+AGG | + | chr5.1:33530255-33530274 | MS.gene92931:CDS | 35.0% | |
| GATGAAAGGGCTTACAAATA+CGG | - | chr5.1:33531273-33531292 | None:intergenic | 35.0% | |
| GCTTAATGAATGCCATAACA+AGG | + | chr5.1:33532986-33533005 | MS.gene92931:intron | 35.0% | |
| GGAAGAAGAGAAAGAAGTTA+AGG | + | chr5.1:33530451-33530470 | MS.gene92931:CDS | 35.0% | |
| GGTGGAAAAAAAAGCAACTA+AGG | + | chr5.1:33530140-33530159 | MS.gene92931:CDS | 35.0% | |
| GTAATATAAGTCCTGAGTGT+TGG | - | chr5.1:33533014-33533033 | None:intergenic | 35.0% | |
| TAAATCTGGTCATGTTGCAA+TGG | + | chr5.1:33530059-33530078 | MS.gene92931:CDS | 35.0% | |
| TATGAACGTAGTTCAACTTG+GGG | + | chr5.1:33530020-33530039 | MS.gene92931:CDS | 35.0% | |
| TCTATGAACGTAGTTCAACT+TGG | + | chr5.1:33530018-33530037 | MS.gene92931:CDS | 35.0% | |
| TGAAAAAAGTTACAAGGCGA+AGG | + | chr5.1:33530477-33530496 | MS.gene92931:CDS | 35.0% | |
| TGTGGTGTAGTAATGTATCT+TGG | - | chr5.1:33532543-33532562 | None:intergenic | 35.0% | |
| TTCCTTTACTGAAAATGTGG+AGG | + | chr5.1:33530586-33530605 | MS.gene92931:CDS | 35.0% | |
| TTCTTAGAACCATCATCAGA+GGG | - | chr5.1:33530288-33530307 | None:intergenic | 35.0% | |
| ! | ATCCTCCACATTTTCAGTAA+AGG | - | chr5.1:33530591-33530610 | None:intergenic | 35.0% |
| ! | ATCTAAACCTAAGAAGGTGT+CGG | + | chr5.1:33530164-33530183 | MS.gene92931:CDS | 35.0% |
| ! | ATTGATAGTAAAAGGGCTAC+AGG | + | chr5.1:33530962-33530981 | MS.gene92931:CDS | 35.0% |
| ! | TAAGGCATCTAAACCTAAGA+AGG | + | chr5.1:33530158-33530177 | MS.gene92931:CDS | 35.0% |
| ! | TCCACATTTTCAGTAAAGGA+AGG | - | chr5.1:33530587-33530606 | None:intergenic | 35.0% |
| ! | TTGGTGATATAGCAGCATTA+TGG | + | chr5.1:33531181-33531200 | MS.gene92931:intron | 35.0% |
| !! | AGAAGGGACAATTGATTTGT+TGG | + | chr5.1:33530224-33530243 | MS.gene92931:CDS | 35.0% |
| !! | ATTTTAGAGGATAAAGGTGG+TGG | + | chr5.1:33530533-33530552 | MS.gene92931:CDS | 35.0% |
| !! | CAACCAACAGCATTACTTTT+TGG | - | chr5.1:33531984-33532003 | None:intergenic | 35.0% |
| !! | GGTCAGCATTGATAGTAAAA+GGG | + | chr5.1:33530955-33530974 | MS.gene92931:CDS | 35.0% |
| !! | TGAAACATCTCTCTAAAGCT+AGG | + | chr5.1:33533105-33533124 | MS.gene92931:intron | 35.0% |
| !! | TTCATCTATGTCACCGATTT+CGG | - | chr5.1:33530564-33530583 | None:intergenic | 35.0% |
| !! | TTGGGTTTCAGTTCAAGTTT+TGG | + | chr5.1:33529891-33529910 | MS.gene92931:intron | 35.0% |
| !! | TTGGTGTCAAATTCTTCAGA+TGG | - | chr5.1:33532422-33532441 | None:intergenic | 35.0% |
| !!! | CTGTTTTGTTTTAGCTGCTT+GGG | + | chr5.1:33532105-33532124 | MS.gene92931:intron | 35.0% |
| !!! | TAGCTTAGTTTTGGGATAGT+TGG | - | chr5.1:33531761-33531780 | None:intergenic | 35.0% |
| !!! | TCTGTTTTGTTTTAGCTGCT+TGG | + | chr5.1:33532104-33532123 | MS.gene92931:intron | 35.0% |
| AAGTGGAAGAAAGTGAGCAA+GGG | - | chr5.1:33529687-33529706 | None:intergenic | 40.0% | |
| ACAAGTGAAAGGGGTAATTG+GGG | - | chr5.1:33532600-33532619 | None:intergenic | 40.0% | |
| ACACGGAAGACTCGAAAAAA+AGG | + | chr5.1:33530312-33530331 | MS.gene92931:CDS | 40.0% | |
| ATGAACGTAGTTCAACTTGG+GGG | + | chr5.1:33530021-33530040 | MS.gene92931:CDS | 40.0% | |
| CAACTTGGACATAGAAGCTT+TGG | + | chr5.1:33531944-33531963 | MS.gene92931:intron | 40.0% | |
| CAAGAACTAGAGTTCCTATG+CGG | + | chr5.1:33532389-33532408 | MS.gene92931:CDS | 40.0% | |
| CACAAGTGAAAGGGGTAATT+GGG | - | chr5.1:33532601-33532620 | None:intergenic | 40.0% | |
| CATACTTGATGCTATGCTCT+AGG | - | chr5.1:33533216-33533235 | None:intergenic | 40.0% | |
| CTGACATGTCACAAGTGAAA+GGG | - | chr5.1:33532610-33532629 | None:intergenic | 40.0% | |
| CTTCTTAGAACCATCATCAG+AGG | - | chr5.1:33530289-33530308 | None:intergenic | 40.0% | |
| GAAGACATAAGCGATACCTA+CGG | + | chr5.1:33530650-33530669 | MS.gene92931:CDS | 40.0% | |
| GACAATAAGGATTGAACCCT+AGG | + | chr5.1:33531920-33531939 | MS.gene92931:intron | 40.0% | |
| GAGCCCTAACAAATTTCTCA+GGG | - | chr5.1:33530796-33530815 | None:intergenic | 40.0% | |
| GAGCTTATGAATAGAGATGG+AGG | - | chr5.1:33531352-33531371 | None:intergenic | 40.0% | |
| GTCAAACAATCTTCAGCACA+GGG | - | chr5.1:33531040-33531059 | None:intergenic | 40.0% | |
| GTTGGTTGAAAGCTCATGAA+TGG | + | chr5.1:33531996-33532015 | MS.gene92931:intron | 40.0% | |
| TAAACCTTCCTATGCCACTA+TGG | + | chr5.1:33532294-33532313 | MS.gene92931:CDS | 40.0% | |
| TACTATCAATGCTGACCGAT+CGG | - | chr5.1:33530952-33530971 | None:intergenic | 40.0% | |
| TAGTGAAAATGAACCTGTGG+TGG | + | chr5.1:33530122-33530141 | MS.gene92931:CDS | 40.0% | |
| TCACAAGTGAAAGGGGTAAT+TGG | - | chr5.1:33532602-33532621 | None:intergenic | 40.0% | |
| TCTATGTCCAAGTTGTCCTA+GGG | - | chr5.1:33531939-33531958 | None:intergenic | 40.0% | |
| TCTTGTCTTTGCAATTGTGC+AGG | + | chr5.1:33529965-33529984 | MS.gene92931:intron | 40.0% | |
| TGAACTCCACGAAAGAATGA+AGG | + | chr5.1:33530757-33530776 | MS.gene92931:CDS | 40.0% | |
| TGACATGTCACAAGTGAAAG+GGG | - | chr5.1:33532609-33532628 | None:intergenic | 40.0% | |
| TGATCTATAAGCCTATTGGC+AGG | - | chr5.1:33530737-33530756 | None:intergenic | 40.0% | |
| TGTCAAACAATCTTCAGCAC+AGG | - | chr5.1:33531041-33531060 | None:intergenic | 40.0% | |
| TTAGAAACGTGGCGACAATA+AGG | + | chr5.1:33531907-33531926 | MS.gene92931:intron | 40.0% | |
| TTCTATGTCCAAGTTGTCCT+AGG | - | chr5.1:33531940-33531959 | None:intergenic | 40.0% | |
| TTGACACCAAAAACAATGCC+AGG | + | chr5.1:33532432-33532451 | MS.gene92931:CDS | 40.0% | |
| TTGACGTGTTGAAAGAGGTA+CGG | + | chr5.1:33531077-33531096 | MS.gene92931:intron | 40.0% | |
| ! | ACCACAGGTTCATTTTCACT+AGG | - | chr5.1:33530123-33530142 | None:intergenic | 40.0% |
| ! | CAACTACTTCAGGTTCGTAA+TGG | - | chr5.1:33532469-33532488 | None:intergenic | 40.0% |
| ! | CTTTGACCTGGCATTGTTTT+TGG | - | chr5.1:33532441-33532460 | None:intergenic | 40.0% |
| ! | GATTTTATGCCATAAGGGTC+AGG | - | chr5.1:33533322-33533341 | None:intergenic | 40.0% |
| ! | TTTCTGGAAAATCAGCCGAT+TGG | + | chr5.1:33532860-33532879 | MS.gene92931:intron | 40.0% |
| !! | ACTACAGATAAAGGGTACCT+GGG | - | chr5.1:33529710-33529729 | None:intergenic | 40.0% |
| !! | AGAAATTTGTTAGGGCTCCT+GGG | + | chr5.1:33530798-33530817 | MS.gene92931:CDS | 40.0% |
| !! | ATTCTTGTGCTGGTTGAATG+TGG | + | chr5.1:33529933-33529952 | MS.gene92931:intron | 40.0% |
| !! | CGGTCAGCATTGATAGTAAA+AGG | + | chr5.1:33530954-33530973 | MS.gene92931:CDS | 40.0% |
| !! | GAGCCCTGAGAAATTTGTTA+GGG | + | chr5.1:33530790-33530809 | MS.gene92931:CDS | 40.0% |
| !! | GATTGCAAAGCATTTTGGAG+CGG | + | chr5.1:33532256-33532275 | MS.gene92931:CDS | 40.0% |
| !! | GTAATGGACAAACTTTGACC+TGG | - | chr5.1:33532453-33532472 | None:intergenic | 40.0% |
| !!! | GTTGCTTTTTTTTCCACCAC+AGG | - | chr5.1:33530138-33530157 | None:intergenic | 40.0% |
| AAAGAATGAAGGATGCCCTC+TGG | + | chr5.1:33530768-33530787 | MS.gene92931:CDS | 45.0% | |
| AAATTTCTCAGGGCTCCAGA+GGG | - | chr5.1:33530786-33530805 | None:intergenic | 45.0% | |
| AACCATCATCAGAGGGAGAT+GGG | - | chr5.1:33530281-33530300 | None:intergenic | 45.0% | |
| AAGAGCAATGGCAACACTAC+CGG | - | chr5.1:33530831-33530850 | None:intergenic | 45.0% | |
| AAGGCGAAGGAAACCTAAAG+AGG | + | chr5.1:33530490-33530509 | MS.gene92931:CDS | 45.0% | |
| ACATAAGCGATACCTACGGT+TGG | + | chr5.1:33530654-33530673 | MS.gene92931:CDS | 45.0% | |
| ACCTAGACTAGCAAGAGCAA+TGG | - | chr5.1:33530843-33530862 | None:intergenic | 45.0% | |
| ACTATCAATGCTGACCGATC+GGG | - | chr5.1:33530951-33530970 | None:intergenic | 45.0% | |
| ACTTGTGACATGTCAGCATC+TGG | + | chr5.1:33532614-33532633 | MS.gene92931:CDS | 45.0% | |
| ATAACAAGGAGCCAACACTC+AGG | + | chr5.1:33533000-33533019 | MS.gene92931:intron | 45.0% | |
| ATCAGCCGATTGGACTTTGT+TGG | + | chr5.1:33532870-33532889 | MS.gene92931:intron | 45.0% | |
| ATCTCATGTGACGATCAAGG+AGG | - | chr5.1:33532214-33532233 | None:intergenic | 45.0% | |
| CATAGTGGTGCAACTACTTC+AGG | - | chr5.1:33532479-33532498 | None:intergenic | 45.0% | |
| CCAAAGCAACAAACAAGAGG+AGG | - | chr5.1:33530680-33530699 | None:intergenic | 45.0% | |
| CCTTGCCAACAAAGTCCAAT+CGG | - | chr5.1:33532878-33532897 | None:intergenic | 45.0% | |
| CTGAAGTAGTTGCACCACTA+TGG | + | chr5.1:33532477-33532496 | MS.gene92931:CDS | 45.0% | |
| CTTTCCTCCACAGGAAGATA+CGG | + | chr5.1:33533285-33533304 | MS.gene92931:CDS | 45.0% | |
| GAAGTGGAAGAAAGTGAGCA+AGG | - | chr5.1:33529688-33529707 | None:intergenic | 45.0% | |
| GACATTACTCCTGACCCTTA+TGG | + | chr5.1:33533310-33533329 | MS.gene92931:CDS | 45.0% | |
| GATTGAACCCTAGGACAACT+TGG | + | chr5.1:33531929-33531948 | MS.gene92931:intron | 45.0% | |
| GCCTAGTGAAAATGAACCTG+TGG | + | chr5.1:33530119-33530138 | MS.gene92931:CDS | 45.0% | |
| GCTAGGAAGAAAGCTTCACT+AGG | + | chr5.1:33530081-33530100 | MS.gene92931:CDS | 45.0% | |
| GCTCCAAAGCAACAAACAAG+AGG | - | chr5.1:33530683-33530702 | None:intergenic | 45.0% | |
| GCTGACATGTCACAAGTGAA+AGG | - | chr5.1:33532611-33532630 | None:intergenic | 45.0% | |
| GGAGCCCTAACAAATTTCTC+AGG | - | chr5.1:33530797-33530816 | None:intergenic | 45.0% | |
| GGTGTCTCACTGATGAAGAT+TGG | + | chr5.1:33530983-33531002 | MS.gene92931:CDS | 45.0% | |
| TCTCATGTGACGATCAAGGA+GGG | - | chr5.1:33532213-33532232 | None:intergenic | 45.0% | |
| TGGATCTCATGTGACGATCA+AGG | - | chr5.1:33532217-33532236 | None:intergenic | 45.0% | |
| TGTGCAGGTGTAACTTGACT+TGG | + | chr5.1:33529980-33529999 | MS.gene92931:intron | 45.0% | |
| ! | AATTGTCCCTTCTGGAGACT+CGG | - | chr5.1:33530217-33530236 | None:intergenic | 45.0% |
| ! | ATGCTTTTGTGCCTTCAGGT+AGG | + | chr5.1:33530711-33530730 | MS.gene92931:CDS | 45.0% |
| ! | ATTGCTCTTGCTAGTCTAGG+TGG | + | chr5.1:33530842-33530861 | MS.gene92931:CDS | 45.0% |
| ! | CAACATGCTTTTGTGCCTTC+AGG | + | chr5.1:33530707-33530726 | MS.gene92931:CDS | 45.0% |
| ! | CCTCCTCTTGTTTGTTGCTT+TGG | + | chr5.1:33530677-33530696 | MS.gene92931:CDS | 45.0% |
| ! | GGAGCCCTGAGAAATTTGTT+AGG | + | chr5.1:33530789-33530808 | MS.gene92931:CDS | 45.0% |
| !! | AAATTTGTTAGGGCTCCTGG+GGG | + | chr5.1:33530800-33530819 | MS.gene92931:CDS | 45.0% |
| !! | CAGATGGTGTTATTCCGCAT+AGG | - | chr5.1:33532406-33532425 | None:intergenic | 45.0% |
| !! | GAAATTTGTTAGGGCTCCTG+GGG | + | chr5.1:33530799-33530818 | MS.gene92931:CDS | 45.0% |
| !! | GACTACAGATAAAGGGTACC+TGG | - | chr5.1:33529711-33529730 | None:intergenic | 45.0% |
| !! | GAGAAATTTGTTAGGGCTCC+TGG | + | chr5.1:33530797-33530816 | MS.gene92931:CDS | 45.0% |
| !! | TGAGTGTTGGCTCCTTGTTA+TGG | - | chr5.1:33533001-33533020 | None:intergenic | 45.0% |
| !! | TGCATCTAGTTCTGCTGCTT+TGG | + | chr5.1:33530430-33530449 | MS.gene92931:CDS | 45.0% |
| !!! | AGGTGGCAAGGTTGCTTTTA+TGG | + | chr5.1:33530859-33530878 | MS.gene92931:CDS | 45.0% |
| !!! | GGTGGCAAGGTTGCTTTTAT+GGG | + | chr5.1:33530860-33530879 | MS.gene92931:CDS | 45.0% |
| AGACGTTCGTTCAGCAAGTG+TGG | + | chr5.1:33532336-33532355 | MS.gene92931:CDS | 50.0% | |
| AGTGCCATAGTGGCATAGGA+AGG | - | chr5.1:33532301-33532320 | None:intergenic | 50.0% | |
| ATGTCCTCCGTATCTTCCTG+TGG | - | chr5.1:33533295-33533314 | None:intergenic | 50.0% | |
| CAAATTTCTCAGGGCTCCAG+AGG | - | chr5.1:33530787-33530806 | None:intergenic | 50.0% | |
| CCGATTGGACTTTGTTGGCA+AGG | + | chr5.1:33532875-33532894 | MS.gene92931:intron | 50.0% | |
| CTCACTTTCTTCCACTTCCC+AGG | + | chr5.1:33529690-33529709 | MS.gene92931:CDS | 50.0% | |
| CTGGTCATGTTGCAATGGCT+AGG | + | chr5.1:33530064-33530083 | MS.gene92931:CDS | 50.0% | |
| GAACCATCATCAGAGGGAGA+TGG | - | chr5.1:33530282-33530301 | None:intergenic | 50.0% | |
| GACATGTCAGCATCTGGAGA+CGG | + | chr5.1:33532620-33532639 | MS.gene92931:CDS | 50.0% | |
| GGATGAGACTGACGATGGTT+TGG | + | chr5.1:33530607-33530626 | MS.gene92931:CDS | 50.0% | |
| GGGCATCCTTCATTCTTTCG+TGG | - | chr5.1:33530766-33530785 | None:intergenic | 50.0% | |
| GGGCTTACAAATACGGACAG+AGG | - | chr5.1:33531266-33531285 | None:intergenic | 50.0% | |
| GTCTTTGCCGACACCTTCTT+AGG | - | chr5.1:33530174-33530193 | None:intergenic | 50.0% | |
| TACTACACCACAGAGCTCGA+TGG | + | chr5.1:33532551-33532570 | MS.gene92931:CDS | 50.0% | |
| TATGCCACTATGGCACTCTC+AGG | + | chr5.1:33532304-33532323 | MS.gene92931:CDS | 50.0% | |
| TGGATACTTGGTCGAGTACG+CGG | + | chr5.1:33533262-33533281 | MS.gene92931:CDS | 50.0% | |
| ! | CTTGATAGCTCGCAATGTCG+TGG | - | chr5.1:33532237-33532256 | None:intergenic | 50.0% |
| ! | GACTGACGATGGTTTGGATC+TGG | + | chr5.1:33530613-33530632 | MS.gene92931:CDS | 50.0% |
| ! | GCCATTGCTCTTGCTAGTCT+AGG | + | chr5.1:33530839-33530858 | MS.gene92931:CDS | 50.0% |
| ! | TCTTGCTAGTCTAGGTGGCA+AGG | + | chr5.1:33530847-33530866 | MS.gene92931:CDS | 50.0% |
| !! | GATAAAGGGTACCTGGGAAG+TGG | - | chr5.1:33529704-33529723 | None:intergenic | 50.0% |
| !! | TCTTCCTGAGAGTGCCATAG+TGG | - | chr5.1:33532311-33532330 | None:intergenic | 50.0% |
| !! | TGAGAGTGCCATAGTGGCAT+AGG | - | chr5.1:33532305-33532324 | None:intergenic | 50.0% |
| AACAAGAGGAGGCCAACCGT+AGG | - | chr5.1:33530669-33530688 | None:intergenic | 55.0% | |
| AACAGCACCATCGAGCTCTG+TGG | - | chr5.1:33532561-33532580 | None:intergenic | 55.0% | |
| CGAAAGCCGAGTCTCCAGAA+GGG | + | chr5.1:33530208-33530227 | MS.gene92931:CDS | 55.0% | |
| CTATTGGCAGGCCTACCTGA+AGG | - | chr5.1:33530725-33530744 | None:intergenic | 55.0% | |
| CTTCAGGTAGGCCTGCCAAT+AGG | + | chr5.1:33530723-33530742 | MS.gene92931:CDS | 55.0% | |
| GTGGAGGATGAGACTGACGA+TGG | + | chr5.1:33530602-33530621 | MS.gene92931:CDS | 55.0% | |
| TCCTCCACAGGAAGATACGG+AGG | + | chr5.1:33533288-33533307 | MS.gene92931:CDS | 55.0% | |
| TCCTCCGTATCTTCCTGTGG+AGG | - | chr5.1:33533292-33533311 | None:intergenic | 55.0% | |
| TCGAAAGCCGAGTCTCCAGA+AGG | + | chr5.1:33530207-33530226 | MS.gene92931:CDS | 55.0% | |
| TCTGGAGACGGCATTGTTGC+AGG | + | chr5.1:33532632-33532651 | MS.gene92931:CDS | 55.0% | |
| ! | GGTGGTGGTGAAGCCGAAAT+CGG | + | chr5.1:33530548-33530567 | MS.gene92931:CDS | 55.0% |
| !! | AGCTCGATGGTGCTGTTAGC+GGG | + | chr5.1:33532564-33532583 | MS.gene92931:CDS | 55.0% |
| !! | GAGCTCGATGGTGCTGTTAG+CGG | + | chr5.1:33532563-33532582 | MS.gene92931:CDS | 55.0% |
| AGTACGCGGCTTTCCTCCAC+AGG | + | chr5.1:33533276-33533295 | MS.gene92931:CDS | 60.0% | |
| GGCCCATCTCCCTCTGATGA+TGG | + | chr5.1:33530276-33530295 | MS.gene92931:CDS | 60.0% | |
| !! | CGATGGTGCTGTTAGCGGGA+TGG | + | chr5.1:33532568-33532587 | MS.gene92931:CDS | 60.0% |
| !! | TGGTGCTGTTAGCGGGATGG+AGG | + | chr5.1:33532571-33532590 | MS.gene92931:CDS | 60.0% |
| ACACTACCGGCACAACCCCC+AGG | - | chr5.1:33530818-33530837 | None:intergenic | 65.0% | |
| AGGGCTCCTGGGGGTTGTGC+CGG | + | chr5.1:33530809-33530828 | MS.gene92931:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 33529671 | 33533387 | 33529671 | ID=MS.gene92931 |
| chr5.1 | mRNA | 33529671 | 33533387 | 33529671 | ID=MS.gene92931.t1;Parent=MS.gene92931 |
| chr5.1 | exon | 33529671 | 33529711 | 33529671 | ID=MS.gene92931.t1.exon1;Parent=MS.gene92931.t1 |
| chr5.1 | CDS | 33529671 | 33529711 | 33529671 | ID=cds.MS.gene92931.t1;Parent=MS.gene92931.t1 |
| chr5.1 | exon | 33529987 | 33530333 | 33529987 | ID=MS.gene92931.t1.exon2;Parent=MS.gene92931.t1 |
| chr5.1 | CDS | 33529987 | 33530333 | 33529987 | ID=cds.MS.gene92931.t1;Parent=MS.gene92931.t1 |
| chr5.1 | exon | 33530429 | 33531093 | 33530429 | ID=MS.gene92931.t1.exon3;Parent=MS.gene92931.t1 |
| chr5.1 | CDS | 33530429 | 33531093 | 33530429 | ID=cds.MS.gene92931.t1;Parent=MS.gene92931.t1 |
| chr5.1 | exon | 33532182 | 33532653 | 33532182 | ID=MS.gene92931.t1.exon4;Parent=MS.gene92931.t1 |
| chr5.1 | CDS | 33532182 | 33532653 | 33532182 | ID=cds.MS.gene92931.t1;Parent=MS.gene92931.t1 |
| chr5.1 | exon | 33533161 | 33533387 | 33533161 | ID=MS.gene92931.t1.exon5;Parent=MS.gene92931.t1 |
| chr5.1 | CDS | 33533161 | 33533387 | 33533161 | ID=cds.MS.gene92931.t1;Parent=MS.gene92931.t1 |
| Gene Sequence |
| Protein sequence |
