Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93130.t1 | RHN82642.1 | 98.8 | 568 | 7 | 0 | 1 | 568 | 1 | 568 | 0.00E+00 | 1127.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93130.t1 | P32069 | 77.6 | 541 | 119 | 2 | 29 | 567 | 67 | 607 | 3.0e-248 | 859.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93130.t1 | A0A396JYT6 | 98.8 | 568 | 7 | 0 | 1 | 568 | 1 | 568 | 0.0e+00 | 1127.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene035805 | MS.gene93130 | PPI |
| MS.gene040899 | MS.gene93130 | PPI |
| MS.gene93130 | MS.gene82992 | PPI |
| MS.gene93130 | MS.gene064542 | PPI |
| MS.gene93130 | MS.gene061004 | PPI |
| MS.gene93130 | MS.gene73119 | PPI |
| MS.gene026451 | MS.gene93130 | PPI |
| MS.gene93130 | MS.gene040883 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93130.t1 | MTR_1g114520 | 95.951 | 568 | 10 | 1 | 1 | 568 | 1 | 555 | 0.0 | 1124 |
| MS.gene93130.t1 | MTR_3g070290 | 74.229 | 551 | 136 | 1 | 24 | 568 | 52 | 602 | 0.0 | 851 |
| MS.gene93130.t1 | MTR_3g467000 | 74.094 | 552 | 137 | 1 | 23 | 568 | 50 | 601 | 0.0 | 848 |
| MS.gene93130.t1 | MTR_3g076770 | 71.171 | 555 | 151 | 2 | 23 | 568 | 50 | 604 | 0.0 | 800 |
| MS.gene93130.t1 | MTR_1g095360 | 31.051 | 409 | 244 | 9 | 156 | 558 | 458 | 834 | 3.43e-44 | 168 |
| MS.gene93130.t1 | MTR_1g095360 | 31.051 | 409 | 244 | 9 | 156 | 558 | 493 | 869 | 3.82e-44 | 168 |
| MS.gene93130.t1 | MTR_4g076520 | 26.756 | 299 | 191 | 7 | 270 | 560 | 278 | 556 | 1.36e-14 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93130.t1 | AT2G29690 | 77.634 | 541 | 119 | 2 | 29 | 567 | 67 | 607 | 0.0 | 882 |
| MS.gene93130.t1 | AT5G05730 | 72.887 | 568 | 150 | 2 | 5 | 568 | 28 | 595 | 0.0 | 862 |
| MS.gene93130.t1 | AT5G05730 | 69.347 | 597 | 150 | 3 | 5 | 568 | 28 | 624 | 0.0 | 847 |
| MS.gene93130.t1 | AT3G55870 | 72.872 | 564 | 148 | 4 | 10 | 568 | 23 | 586 | 0.0 | 830 |
| MS.gene93130.t1 | AT3G55870 | 75.914 | 465 | 111 | 1 | 105 | 568 | 23 | 487 | 0.0 | 728 |
| MS.gene93130.t1 | AT2G29690 | 75.688 | 436 | 104 | 2 | 29 | 462 | 67 | 502 | 0.0 | 691 |
| MS.gene93130.t1 | AT3G55870 | 70.614 | 456 | 130 | 3 | 10 | 461 | 23 | 478 | 0.0 | 645 |
| MS.gene93130.t1 | AT2G28880 | 32.360 | 411 | 238 | 10 | 155 | 558 | 532 | 909 | 6.94e-52 | 191 |
| MS.gene93130.t1 | AT1G74710 | 24.551 | 334 | 215 | 9 | 234 | 559 | 254 | 558 | 1.51e-11 | 67.4 |
| MS.gene93130.t1 | AT1G18870 | 25.097 | 259 | 169 | 5 | 304 | 559 | 317 | 553 | 1.58e-11 | 67.4 |
| MS.gene93130.t1 | AT1G18870 | 25.097 | 259 | 169 | 5 | 304 | 559 | 267 | 503 | 1.63e-11 | 67.4 |
| MS.gene93130.t1 | AT1G74710 | 24.923 | 325 | 207 | 9 | 234 | 550 | 254 | 549 | 9.47e-11 | 65.1 |
Find 155 sgRNAs with CRISPR-Local
Find 407 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACCCGTGTAAGAATTTC+TGG | 0.091471 | 1.1:+80448052 | None:intergenic |
| TTACTCCGGTTCTTGCTTAT+CGG | 0.261328 | 1.1:-80450794 | MS.gene93130:CDS |
| GGTCATTCCTCGTAGGATTA+TGG | 0.271060 | 1.1:-80450321 | MS.gene93130:CDS |
| AGGCCTTCCTGATGTTCATC+TGG | 0.275678 | 1.1:-80449123 | MS.gene93130:CDS |
| ACATGTAATGCTGGTCGATT+TGG | 0.277906 | 1.1:-80447699 | MS.gene93130:CDS |
| TCCATATATGACTTATTTGC+AGG | 0.288097 | 1.1:-80448196 | MS.gene93130:intron |
| TCTAACATGATATCTTCTTT+TGG | 0.289010 | 1.1:+80447758 | None:intergenic |
| ACCTGCAAATAAGTCATATA+TGG | 0.299587 | 1.1:+80448195 | None:intergenic |
| TCAGGCCAGAGGGAGTATTT+TGG | 0.306599 | 1.1:-80448086 | MS.gene93130:intron |
| CCTCCAAATCCGCCACTATA+TGG | 0.308858 | 1.1:+80445664 | None:intergenic |
| TGCCCATCTTTGCAGGTAAC+CGG | 0.311023 | 1.1:-80446053 | MS.gene93130:intron |
| ATCACCAATCGGCCCCTTGC+TGG | 0.312862 | 1.1:-80447803 | MS.gene93130:CDS |
| AACAAGCTGGGATGCATTGC+GGG | 0.317825 | 1.1:-80446012 | MS.gene93130:CDS |
| ATGTTTGACAACTCCAGTTT+AGG | 0.319037 | 1.1:+80448372 | None:intergenic |
| AGAGAATATGGTTACTATAA+TGG | 0.325486 | 1.1:-80450390 | MS.gene93130:CDS |
| GGTCCATATAGTGGCGGATT+TGG | 0.325854 | 1.1:-80445667 | MS.gene93130:CDS |
| AGAAAGCATATGTGATTCAT+TGG | 0.343107 | 1.1:-80448655 | MS.gene93130:CDS |
| GGAAGGCCTCTGTCATCTAT+AGG | 0.345977 | 1.1:+80449137 | None:intergenic |
| CTCTTTGAATCTGCTGAACC+TGG | 0.350525 | 1.1:-80450732 | MS.gene93130:CDS |
| GAAGGCCTCTGTCATCTATA+GGG | 0.350656 | 1.1:+80449138 | None:intergenic |
| ATTGAACCTGCAGGCAGCCT+TGG | 0.350822 | 1.1:+80448420 | None:intergenic |
| GATTGTGGCAAAAGAGAATA+TGG | 0.353657 | 1.1:-80450402 | MS.gene93130:CDS |
| ATACAAGAAGGCAGTATTGC+AGG | 0.356375 | 1.1:-80448337 | MS.gene93130:CDS |
| AAGTTACTCACTCGTCTCTT+TGG | 0.356841 | 1.1:-80448396 | MS.gene93130:CDS |
| GGAAATTGTGCTGGATCCTT+TGG | 0.361954 | 1.1:-80450342 | MS.gene93130:CDS |
| CATGTAATGCTGGTCGATTT+GGG | 0.368676 | 1.1:-80447698 | MS.gene93130:CDS |
| AACTTGAACAGAACCGGGTT+TGG | 0.369496 | 1.1:+80446381 | None:intergenic |
| TTGAACCTGCAGGCAGCCTT+GGG | 0.382927 | 1.1:+80448421 | None:intergenic |
| TCGTCTCTTTGGTCCTAAAC+TGG | 0.390106 | 1.1:-80448385 | MS.gene93130:CDS |
| ACACAATCACGTTATCATAA+AGG | 0.402252 | 1.1:+80449099 | None:intergenic |
| ATCTGGAAACCGAGATGGTT+GGG | 0.402770 | 1.1:+80450955 | None:intergenic |
| CATATGTGATTCATTGGGTT+CGG | 0.407730 | 1.1:-80448649 | MS.gene93130:CDS |
| TTCTAGAAGCTTCGAAGAAA+GGG | 0.409387 | 1.1:-80450857 | MS.gene93130:CDS |
| AGCTGGAAACTCTTGTATCT+AGG | 0.414655 | 1.1:-80448577 | MS.gene93130:CDS |
| AGAGCTCTGTAGACTTCAAA+AGG | 0.422697 | 1.1:+80448237 | None:intergenic |
| TTTCTAGAAGCTTCGAAGAA+AGG | 0.424315 | 1.1:-80450858 | MS.gene93130:CDS |
| CATTCTCTTTGCTCATCAGC+TGG | 0.425902 | 1.1:+80445478 | None:intergenic |
| GATTGAGAGGCGCATTTGAT+CGG | 0.443693 | 1.1:+80450909 | None:intergenic |
| CTTTCTCAGCAGAAGAATAT+CGG | 0.444624 | 1.1:+80448621 | None:intergenic |
| TTCCTGCTCCAGCCTGGAGA+TGG | 0.449666 | 1.1:+80445518 | None:intergenic |
| GCCCATCTCCAGGCTGGAGC+AGG | 0.451949 | 1.1:-80445520 | MS.gene93130:CDS |
| GTAACCGGGGAGTTATTAGA+TGG | 0.453600 | 1.1:-80446038 | MS.gene93130:CDS |
| GCCCATCTTTGCAGGTAACC+GGG | 0.453865 | 1.1:-80446052 | MS.gene93130:intron |
| CTTGTCCAATCCATCGTTGA+GGG | 0.458082 | 1.1:+80448598 | None:intergenic |
| TATTAGATGGCTTAACAAGC+TGG | 0.462102 | 1.1:-80446025 | MS.gene93130:CDS |
| GTATCAAAGCGAGTATTAGT+AGG | 0.463134 | 1.1:+80445586 | None:intergenic |
| CCATATAGTGGCGGATTTGG+AGG | 0.467058 | 1.1:-80445664 | MS.gene93130:CDS |
| GAAAGCATATGTGATTCATT+GGG | 0.469787 | 1.1:-80448654 | MS.gene93130:CDS |
| GGTGGGAGCGCAACCGTGTA+TGG | 0.472383 | 1.1:-80450426 | MS.gene93130:CDS |
| ACGGTAGTTGGAGTTCCATC+TGG | 0.472808 | 1.1:+80450932 | None:intergenic |
| CAAAAGGGTCTGCAAAAGTT+CGG | 0.472914 | 1.1:+80448253 | None:intergenic |
| CCACAATTCCTGCTCCAGCC+TGG | 0.483512 | 1.1:+80445512 | None:intergenic |
| GCAAGACGTGGTCCATATAG+TGG | 0.483686 | 1.1:-80445676 | MS.gene93130:CDS |
| GCAGGCTAAAGAGCACATAC+TGG | 0.484348 | 1.1:-80448319 | MS.gene93130:CDS |
| TCCTGCTCCAGCCTGGAGAT+GGG | 0.486964 | 1.1:+80445519 | None:intergenic |
| TCACCAATCGGCCCCTTGCT+GGG | 0.491668 | 1.1:-80447802 | MS.gene93130:CDS |
| ATCTATAGGGGCATTAGCAA+AGG | 0.493538 | 1.1:+80449151 | None:intergenic |
| GTTGGAGTTCCATCTGGATC+TGG | 0.494180 | 1.1:+80450938 | None:intergenic |
| TAAAGGCCCAGATGAACATC+AGG | 0.494367 | 1.1:+80449116 | None:intergenic |
| ATGTCAACAAACGCAGAGAA+TGG | 0.498193 | 1.1:-80445546 | MS.gene93130:CDS |
| TGTGTTTGATCATGTTGAAA+AGG | 0.499936 | 1.1:-80449081 | MS.gene93130:intron |
| TGAAGATTCTGCAAGATCAA+TGG | 0.502431 | 1.1:+80445426 | None:intergenic |
| CTGTCTTACGCCCTTCCTCA+TGG | 0.507667 | 1.1:+80450366 | None:intergenic |
| GCATTTGATCGGACGGTAGT+TGG | 0.508335 | 1.1:+80450920 | None:intergenic |
| AATTCTTACACGGGTGAAGA+AGG | 0.508729 | 1.1:-80448047 | MS.gene93130:intron |
| TTCAAATTGTCCTAAGTCAA+CGG | 0.511661 | 1.1:-80448284 | MS.gene93130:CDS |
| GGCCTTCCTGATGTTCATCT+GGG | 0.512513 | 1.1:-80449122 | MS.gene93130:CDS |
| GCAGATTCAAAGAGAAAGCT+AGG | 0.512843 | 1.1:+80450741 | None:intergenic |
| AGACACCGATAAGCAAGAAC+CGG | 0.516159 | 1.1:+80450789 | None:intergenic |
| TTCAGCCCAAGGCTGCCTGC+AGG | 0.519483 | 1.1:-80448426 | MS.gene93130:intron |
| GAAAGCCCTCAACGATGGAT+TGG | 0.519821 | 1.1:-80448603 | MS.gene93130:CDS |
| TGGATTGCCCATCTCCAGGC+TGG | 0.520658 | 1.1:-80445526 | MS.gene93130:CDS |
| AGAATGGATTGCCCATCTCC+AGG | 0.523207 | 1.1:-80445530 | MS.gene93130:CDS |
| GGCGCTCAAACCGTTGACTT+AGG | 0.524769 | 1.1:+80448274 | None:intergenic |
| AGTCCCAGCAAGGGGCCGAT+TGG | 0.526335 | 1.1:+80447799 | None:intergenic |
| AGCAACCAAAATACTCCCTC+TGG | 0.529522 | 1.1:+80448081 | None:intergenic |
| CAAGATCAATGGCACGTGCA+AGG | 0.529960 | 1.1:+80445437 | None:intergenic |
| GCTGGAAACTCTTGTATCTA+GGG | 0.530369 | 1.1:-80448576 | MS.gene93130:CDS |
| CTCTTCTAACAGTCCCAGCA+AGG | 0.531234 | 1.1:+80447789 | None:intergenic |
| GATAAGCAAGAACCGGAGTA+AGG | 0.531308 | 1.1:+80450796 | None:intergenic |
| CAACGATGGATTGGACAAGC+TGG | 0.534892 | 1.1:-80448594 | MS.gene93130:CDS |
| TAAGACAGAGGAAATTGTGC+TGG | 0.537914 | 1.1:-80450351 | MS.gene93130:CDS |
| ATTAGATGGCTTAACAAGCT+GGG | 0.540962 | 1.1:-80446024 | MS.gene93130:CDS |
| TAGAGCTGATGTGCATAACA+TGG | 0.544492 | 1.1:+80446329 | None:intergenic |
| ACTATAATGGACCATGAGGA+AGG | 0.545387 | 1.1:-80450377 | MS.gene93130:CDS |
| GCTAAAGAGCACATACTGGC+TGG | 0.546825 | 1.1:-80448315 | MS.gene93130:CDS |
| CCAGGCTGGAGCAGGAATTG+TGG | 0.548615 | 1.1:-80445512 | MS.gene93130:CDS |
| GGGGAGAAATGATGTTGGAA+AGG | 0.553587 | 1.1:-80447678 | MS.gene93130:intron |
| TTACCTGTTGGTACAGTTAG+CGG | 0.556146 | 1.1:-80445984 | MS.gene93130:CDS |
| AAGATCAATGGCACGTGCAA+GGG | 0.561319 | 1.1:+80445438 | None:intergenic |
| GCTCCGCTAACTGTACCAAC+AGG | 0.563390 | 1.1:+80445981 | None:intergenic |
| GATGATGGAAGCTTTATCAA+TGG | 0.567362 | 1.1:-80450991 | MS.gene93130:CDS |
| GATTTGGGGAGAAATGATGT+TGG | 0.569604 | 1.1:-80447683 | MS.gene93130:CDS |
| AAATAAGTCATATATGGACT+AGG | 0.570018 | 1.1:+80448201 | None:intergenic |
| AGTAACTTTATTGAACCTGC+AGG | 0.570919 | 1.1:+80448411 | None:intergenic |
| TATCAAAGCGAGTATTAGTA+GGG | 0.570998 | 1.1:+80445587 | None:intergenic |
| TGATACGATGTACTCGTACA+AGG | 0.572265 | 1.1:-80445569 | MS.gene93130:CDS |
| GTTGATTGATCAGTTAGAAG+TGG | 0.573051 | 1.1:-80445698 | MS.gene93130:CDS |
| TACAGTTAGCGGAGCGCCGA+AGG | 0.573281 | 1.1:-80445973 | MS.gene93130:intron |
| GATATGCAGGTCTCCAAACC+CGG | 0.575816 | 1.1:-80446394 | MS.gene93130:intron |
| TGCTCTTGCTCTGAGGACAA+TGG | 0.577889 | 1.1:-80445614 | MS.gene93130:CDS |
| TGTATCGTTCCCAACCATCT+CGG | 0.578132 | 1.1:-80450964 | MS.gene93130:CDS |
| CAAGTCCAGAAATTCTTACA+CGG | 0.578341 | 1.1:-80448057 | MS.gene93130:CDS |
| GTGCTAGAAACGTGAAGACC+AGG | 0.579504 | 1.1:+80450714 | None:intergenic |
| GATCTGGAAACCGAGATGGT+TGG | 0.579504 | 1.1:+80450954 | None:intergenic |
| CTCGTAGGATTATGGAGAAG+TGG | 0.581090 | 1.1:-80450313 | MS.gene93130:CDS |
| TCTTCTAACAGTCCCAGCAA+GGG | 0.581315 | 1.1:+80447790 | None:intergenic |
| ATCCTTTGGTCATTCCTCGT+AGG | 0.583122 | 1.1:-80450328 | MS.gene93130:CDS |
| TCTATAGGGGCATTAGCAAA+GGG | 0.583893 | 1.1:+80449152 | None:intergenic |
| AAGAGCAATGTCCATATCAC+CGG | 0.585979 | 1.1:+80445630 | None:intergenic |
| TTATCTGCATTATCAACTAG+AGG | 0.589050 | 1.1:+80450882 | None:intergenic |
| GAAAATATGCAACGGTACAG+AGG | 0.590588 | 1.1:+80450825 | None:intergenic |
| TCTGGATCTGGAAACCGAGA+TGG | 0.597779 | 1.1:+80450950 | None:intergenic |
| TTGCGGGCTGCATTACCTGT+TGG | 0.601558 | 1.1:-80445996 | MS.gene93130:CDS |
| AACTAGAGGAAGAGATTGAG+AGG | 0.603764 | 1.1:+80450896 | None:intergenic |
| GCTGAGAAAGCCCTCAACGA+TGG | 0.604347 | 1.1:-80448608 | MS.gene93130:CDS |
| TAACAAGCTGGGATGCATTG+CGG | 0.605178 | 1.1:-80446013 | MS.gene93130:CDS |
| GCTTGTCCAATCCATCGTTG+AGG | 0.605736 | 1.1:+80448597 | None:intergenic |
| TAGGGAAGGTATAGTGTGGT+GGG | 0.608351 | 1.1:-80450443 | MS.gene93130:CDS |
| TAAGCCATCTAATAACTCCC+CGG | 0.612377 | 1.1:+80446034 | None:intergenic |
| GCAACCGTGTATGGAGATTG+TGG | 0.613448 | 1.1:-80450417 | MS.gene93130:CDS |
| ATGTGCAGAACATGTAATGC+TGG | 0.614199 | 1.1:-80447708 | MS.gene93130:CDS |
| GAGCTCTGTAGACTTCAAAA+GGG | 0.615352 | 1.1:+80448238 | None:intergenic |
| TAACTGATCAATCAACTCCA+TGG | 0.617327 | 1.1:+80445705 | None:intergenic |
| TTAGGGAAGGTATAGTGTGG+TGG | 0.618629 | 1.1:-80450444 | MS.gene93130:intron |
| AAGTCCAGAAATTCTTACAC+GGG | 0.619874 | 1.1:-80448056 | MS.gene93130:CDS |
| GACAAAGGAAGAATACAAGA+AGG | 0.623821 | 1.1:-80448349 | MS.gene93130:CDS |
| TTGCTGGGACTGTTAGAAGA+GGG | 0.626764 | 1.1:-80447787 | MS.gene93130:CDS |
| CCCATCTTTGCAGGTAACCG+GGG | 0.628682 | 1.1:-80446051 | MS.gene93130:intron |
| AAGAACCGGAGTAAGGTGAT+CGG | 0.629080 | 1.1:+80450803 | None:intergenic |
| AAGGCCTCTGTCATCTATAG+GGG | 0.631022 | 1.1:+80449139 | None:intergenic |
| TTTGCCACAATCTCCATACA+CGG | 0.633576 | 1.1:+80450413 | None:intergenic |
| ATCCTACGAGGAATGACCAA+AGG | 0.634995 | 1.1:+80450326 | None:intergenic |
| CAGTTAGAAGTGGCAAGACG+TGG | 0.636825 | 1.1:-80445688 | MS.gene93130:CDS |
| CTTGCTGGGACTGTTAGAAG+AGG | 0.637537 | 1.1:-80447788 | MS.gene93130:CDS |
| GAGAGGCGCATTTGATCGGA+CGG | 0.639500 | 1.1:+80450913 | None:intergenic |
| GGAAGATCATCAATGAGTTG+AGG | 0.639630 | 1.1:+80450287 | None:intergenic |
| TCTCGGTTTCCAGATCCAGA+TGG | 0.642541 | 1.1:-80450947 | MS.gene93130:CDS |
| ATGTAATGCTGGTCGATTTG+GGG | 0.643447 | 1.1:-80447697 | MS.gene93130:CDS |
| CTATAATGGACCATGAGGAA+GGG | 0.647769 | 1.1:-80450376 | MS.gene93130:CDS |
| TGTAAAACAGGTAAAAGCCA+TGG | 0.650307 | 1.1:-80445722 | MS.gene93130:intron |
| CTTCTAACAGTCCCAGCAAG+GGG | 0.654689 | 1.1:+80447791 | None:intergenic |
| GGAGTTGTCAAACATGACAA+AGG | 0.660131 | 1.1:-80448364 | MS.gene93130:CDS |
| CATACTCGTATCAGGCCAGA+GGG | 0.660525 | 1.1:-80448096 | MS.gene93130:intron |
| GCGTTAGGGAAGGTATAGTG+TGG | 0.662163 | 1.1:-80450447 | MS.gene93130:intron |
| GGTGATCGGAAAATATGCAA+CGG | 0.666832 | 1.1:+80450817 | None:intergenic |
| TGAGGAAGGGCGTAAGACAG+AGG | 0.670934 | 1.1:-80450363 | MS.gene93130:CDS |
| TGGACATTGCTCTTGCTCTG+AGG | 0.671063 | 1.1:-80445621 | MS.gene93130:CDS |
| AGAGCTGATGTGCATAACAT+GGG | 0.671908 | 1.1:+80446330 | None:intergenic |
| CACTTCTCCATAATCCTACG+AGG | 0.677115 | 1.1:+80450314 | None:intergenic |
| AGACGTGGTCCATATAGTGG+CGG | 0.678375 | 1.1:-80445673 | MS.gene93130:CDS |
| GGTTACTATAATGGACCATG+AGG | 0.678908 | 1.1:-80450381 | MS.gene93130:CDS |
| ACATACTCGTATCAGGCCAG+AGG | 0.684657 | 1.1:-80448097 | MS.gene93130:intron |
| GGCCCAGATGAACATCAGGA+AGG | 0.689455 | 1.1:+80449120 | None:intergenic |
| AATGCCCCTATAGATGACAG+AGG | 0.745608 | 1.1:-80449143 | MS.gene93130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGTTAAAAAAAATTATC+AGG | + | chr1.1:80448253-80448272 | None:intergenic | 10.0% |
| !! | ATTCATTTATTTGTAAAATC+AGG | + | chr1.1:80449740-80449759 | None:intergenic | 15.0% |
| !! | TGGTAAATAAAATTCTTAAA+TGG | - | chr1.1:80449070-80449089 | MS.gene93130:intron | 15.0% |
| !! | TTATGTCTTAAATTAAAGTT+GGG | - | chr1.1:80446244-80446263 | MS.gene93130:intron | 15.0% |
| !! | TTCAAAATATGAATATTTGA+TGG | - | chr1.1:80447446-80447465 | MS.gene93130:intron | 15.0% |
| !! | TTTATGTCTTAAATTAAAGT+TGG | - | chr1.1:80446243-80446262 | MS.gene93130:intron | 15.0% |
| !!! | AAGAATTTTCTATGAAATAA+AGG | + | chr1.1:80448778-80448797 | None:intergenic | 15.0% |
| !!! | ATTAATTGAAACTTGTTAAT+TGG | - | chr1.1:80447547-80447566 | MS.gene93130:intron | 15.0% |
| !!! | ATTTTATGAAAATGAAAAGA+AGG | + | chr1.1:80449516-80449535 | None:intergenic | 15.0% |
| !!! | GAATAATTGAAATATTTTTC+AGG | + | chr1.1:80447705-80447724 | None:intergenic | 15.0% |
| !!! | TATCTCTTTTTTTTTTTTGA+GGG | - | chr1.1:80449541-80449560 | MS.gene93130:intron | 15.0% |
| !! | AAAAATGAATATTGCATTGA+TGG | - | chr1.1:80447106-80447125 | MS.gene93130:intron | 20.0% |
| !! | AACAAATAATATGCATTCAA+AGG | - | chr1.1:80448266-80448285 | MS.gene93130:CDS | 20.0% |
| !! | AAGTAGTCAAAATTTCATAA+TGG | - | chr1.1:80449835-80449854 | MS.gene93130:intron | 20.0% |
| !! | AATAAATGAATTTCGTCAAT+AGG | - | chr1.1:80449749-80449768 | MS.gene93130:intron | 20.0% |
| !! | AATTTATAACAAAATTGTCC+AGG | + | chr1.1:80447133-80447152 | None:intergenic | 20.0% |
| !! | AGAAAATTCTTGCATTATTA+AGG | - | chr1.1:80448787-80448806 | MS.gene93130:intron | 20.0% |
| !! | AGTAAAATGGAAGAAATATA+AGG | + | chr1.1:80448487-80448506 | None:intergenic | 20.0% |
| !! | ATCATATCTCTCAATTTATT+AGG | + | chr1.1:80447660-80447679 | None:intergenic | 20.0% |
| !! | ATGAAAAACATTATCCTAAA+GGG | + | chr1.1:80449392-80449411 | None:intergenic | 20.0% |
| !! | ATGAAAATTATTGATATTGC+TGG | + | chr1.1:80448428-80448447 | None:intergenic | 20.0% |
| !! | ATGCCAAATTAAAAATGAAA+TGG | - | chr1.1:80447018-80447037 | MS.gene93130:intron | 20.0% |
| !! | GTAAAATGGAAGAAATATAA+GGG | + | chr1.1:80448486-80448505 | None:intergenic | 20.0% |
| !! | TAAAATGGAAGAAATATAAG+GGG | + | chr1.1:80448485-80448504 | None:intergenic | 20.0% |
| !! | TATGTCTTAAATTAAAGTTG+GGG | - | chr1.1:80446245-80446264 | MS.gene93130:intron | 20.0% |
| !!! | AAATATGAATATTTGATGGT+AGG | - | chr1.1:80447450-80447469 | MS.gene93130:intron | 20.0% |
| !!! | AAATTTTGACTACTTCAAAA+AGG | + | chr1.1:80449830-80449849 | None:intergenic | 20.0% |
| !!! | AATTTTATCATCCAAAGATA+AGG | + | chr1.1:80450327-80450346 | None:intergenic | 20.0% |
| !!! | AGACCATTTCATTTTTAATT+TGG | + | chr1.1:80447024-80447043 | None:intergenic | 20.0% |
| !!! | ATAAGTTTTGTTAAACTGTT+TGG | - | chr1.1:80446422-80446441 | MS.gene93130:intron | 20.0% |
| !!! | ATCTCTTTTTTTTTTTTGAG+GGG | - | chr1.1:80449542-80449561 | MS.gene93130:intron | 20.0% |
| !!! | ATTATACTCTAGGTTTTTAT+AGG | - | chr1.1:80450454-80450473 | MS.gene93130:intron | 20.0% |
| !!! | ATTGTTTTTCATCATTCAAA+AGG | + | chr1.1:80448675-80448694 | None:intergenic | 20.0% |
| !!! | ATTTTTAATTTGGCATATGA+AGG | + | chr1.1:80447014-80447033 | None:intergenic | 20.0% |
| !!! | CTATCTCTTTTTTTTTTTTG+AGG | - | chr1.1:80449540-80449559 | MS.gene93130:intron | 20.0% |
| !!! | CTCTCTTTTTTTTTTTTTGA+GGG | - | chr1.1:80449636-80449655 | MS.gene93130:intron | 20.0% |
| !!! | TCTCTCTTTTTTTTTTTTTG+AGG | - | chr1.1:80449635-80449654 | MS.gene93130:intron | 20.0% |
| !!! | TCTCTTTTTTTTTTTTTGAG+GGG | - | chr1.1:80449637-80449656 | MS.gene93130:intron | 20.0% |
| !!! | TTTTCATATATGATTACAGT+TGG | - | chr1.1:80448441-80448460 | MS.gene93130:intron | 20.0% |
| ! | AAAAAATTATCAGGTGAGAT+TGG | + | chr1.1:80448244-80448263 | None:intergenic | 25.0% |
| ! | AAAAATTTAAGCAGCCAAAA+TGG | + | chr1.1:80449258-80449277 | None:intergenic | 25.0% |
| ! | AAAATTTAAGCAGCCAAAAT+GGG | + | chr1.1:80449257-80449276 | None:intergenic | 25.0% |
| ! | AAATAAGTCATATATGGACT+AGG | + | chr1.1:80448203-80448222 | None:intergenic | 25.0% |
| ! | AAATGCCTATTAGTATTTGT+TGG | + | chr1.1:80448555-80448574 | None:intergenic | 25.0% |
| ! | AAGGAAAAAAAATTGACCAA+TGG | + | chr1.1:80450207-80450226 | None:intergenic | 25.0% |
| ! | AATAATCAACTCGTTAGATT+TGG | + | chr1.1:80447371-80447390 | None:intergenic | 25.0% |
| ! | ACTTATTTGAGCTTATCTAT+TGG | - | chr1.1:80446398-80446417 | MS.gene93130:intron | 25.0% |
| ! | AGAGAATATGGTTACTATAA+TGG | - | chr1.1:80446011-80446030 | MS.gene93130:CDS | 25.0% |
| ! | AGGAAAAAAAATTGACCAAT+GGG | + | chr1.1:80450206-80450225 | None:intergenic | 25.0% |
| ! | AGTAAAGGTGACTTTATATA+GGG | + | chr1.1:80449209-80449228 | None:intergenic | 25.0% |
| ! | AGTGAAGTTCATAATGTTAA+AGG | + | chr1.1:80448522-80448541 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+AGG | - | chr1.1:80446647-80446666 | MS.gene93130:intron | 25.0% |
| ! | ATGTCTTAAATTAAAGTTGG+GGG | - | chr1.1:80446246-80446265 | MS.gene93130:intron | 25.0% |
| ! | ATTGTTTAGAAAAAAGTGGT+GGG | - | chr1.1:80450556-80450575 | MS.gene93130:intron | 25.0% |
| ! | CATAGAATTGAAGTAACTTA+CGG | + | chr1.1:80445712-80445731 | None:intergenic | 25.0% |
| ! | GATGAAAAACATTATCCTAA+AGG | + | chr1.1:80449393-80449412 | None:intergenic | 25.0% |
| ! | GTAAAACAATTAGGATCATA+CGG | + | chr1.1:80449927-80449946 | None:intergenic | 25.0% |
| ! | GTCAACATTAAATCACAAAA+AGG | + | chr1.1:80446918-80446937 | None:intergenic | 25.0% |
| ! | GTGAAGGAAAATTATAAAGT+TGG | + | chr1.1:80450184-80450203 | None:intergenic | 25.0% |
| ! | GTGAAGTTCATAATGTTAAA+GGG | + | chr1.1:80448521-80448540 | None:intergenic | 25.0% |
| ! | TAAAATTCTTAAATGGTCAG+TGG | - | chr1.1:80449077-80449096 | MS.gene93130:intron | 25.0% |
| ! | TAAAGCAATATGATTCACAT+CGG | + | chr1.1:80449467-80449486 | None:intergenic | 25.0% |
| ! | TAGATCCAACAAATACTAAT+AGG | - | chr1.1:80448547-80448566 | MS.gene93130:intron | 25.0% |
| ! | TTAAAATACATACTCGTATC+AGG | - | chr1.1:80448297-80448316 | MS.gene93130:CDS | 25.0% |
| ! | TTAGTTCAAAACCTTATCTT+TGG | - | chr1.1:80450313-80450332 | MS.gene93130:CDS | 25.0% |
| ! | TTGTGAAAATTTGATGTGTT+TGG | - | chr1.1:80445921-80445940 | MS.gene93130:intron | 25.0% |
| ! | TTTCATATTAAACGTGTTGA+TGG | + | chr1.1:80447625-80447644 | None:intergenic | 25.0% |
| !! | ATTGATCATCATTAGAGTTT+TGG | + | chr1.1:80446302-80446321 | None:intergenic | 25.0% |
| !! | GTATATATGTTGTGTTGATA+TGG | - | chr1.1:80449874-80449893 | MS.gene93130:intron | 25.0% |
| !! | GTTGGCAATATAGAATTTTA+AGG | + | chr1.1:80450166-80450185 | None:intergenic | 25.0% |
| !! | TCTAACATGATATCTTCTTT+TGG | + | chr1.1:80448646-80448665 | None:intergenic | 25.0% |
| !! | TTGATCATCATTAGAGTTTT+GGG | + | chr1.1:80446301-80446320 | None:intergenic | 25.0% |
| !!! | AATATTTTTCAGGACCAAAA+TGG | + | chr1.1:80447695-80447714 | None:intergenic | 25.0% |
| !!! | AGATAAGGTTTTGAACTAAA+TGG | + | chr1.1:80450312-80450331 | None:intergenic | 25.0% |
| !!! | GTAAACTGTTTTTTTCTTCT+TGG | - | chr1.1:80447868-80447887 | MS.gene93130:intron | 25.0% |
| !!! | TATCCATTATTATTTCTGTG+AGG | + | chr1.1:80448885-80448904 | None:intergenic | 25.0% |
| AAATTGAGAGATATGATCCT+GGG | - | chr1.1:80447663-80447682 | MS.gene93130:intron | 30.0% | |
| AATAGGATATTGCAAGGTAA+AGG | + | chr1.1:80450226-80450245 | None:intergenic | 30.0% | |
| AATGAATCACATATGCTTTC+TGG | + | chr1.1:80447747-80447766 | None:intergenic | 30.0% | |
| AATTTGATGTGTTTGGTTGT+TGG | - | chr1.1:80445928-80445947 | MS.gene93130:intron | 30.0% | |
| ACACAATCACGTTATCATAA+AGG | + | chr1.1:80447305-80447324 | None:intergenic | 30.0% | |
| ACAGCTAATGAGAACTATTT+CGG | + | chr1.1:80450657-80450676 | None:intergenic | 30.0% | |
| ACCTGCAAATAAGTCATATA+TGG | + | chr1.1:80448209-80448228 | None:intergenic | 30.0% | |
| AGAATAATCGTATGTGAACA+AGG | + | chr1.1:80448400-80448419 | None:intergenic | 30.0% | |
| AGATGGATATGAAACAGTAA+AGG | + | chr1.1:80449224-80449243 | None:intergenic | 30.0% | |
| ATGAATCACATATGCTTTCT+GGG | + | chr1.1:80447746-80447765 | None:intergenic | 30.0% | |
| CAGTAAAGGTGACTTTATAT+AGG | + | chr1.1:80449210-80449229 | None:intergenic | 30.0% | |
| CCTAGAGTATAATTTACCTT+CGG | + | chr1.1:80450447-80450466 | None:intergenic | 30.0% | |
| GATTGTTTAGAAAAAAGTGG+TGG | - | chr1.1:80450555-80450574 | MS.gene93130:intron | 30.0% | |
| GCTCAAAGTGTAAAACAATT+AGG | + | chr1.1:80449936-80449955 | None:intergenic | 30.0% | |
| GGATTAATATGTCAAGTCAA+GGG | - | chr1.1:80447889-80447908 | MS.gene93130:intron | 30.0% | |
| TAAATTGAGAGATATGATCC+TGG | - | chr1.1:80447662-80447681 | MS.gene93130:intron | 30.0% | |
| TAGCCTCACAGAAATAATAA+TGG | - | chr1.1:80448879-80448898 | MS.gene93130:intron | 30.0% | |
| TATCAAAGCGAGTATTAGTA+GGG | + | chr1.1:80450817-80450836 | None:intergenic | 30.0% | |
| TCACAAAAAGGAAAGAGAAT+AGG | + | chr1.1:80446906-80446925 | None:intergenic | 30.0% | |
| TCCATATATGACTTATTTGC+AGG | - | chr1.1:80448205-80448224 | MS.gene93130:CDS | 30.0% | |
| TGGATTAATATGTCAAGTCA+AGG | - | chr1.1:80447888-80447907 | MS.gene93130:intron | 30.0% | |
| TGTGTTTGATCATGTTGAAA+AGG | - | chr1.1:80447320-80447339 | MS.gene93130:intron | 30.0% | |
| TTATCTGCATTATCAACTAG+AGG | + | chr1.1:80445522-80445541 | None:intergenic | 30.0% | |
| TTCAAATTGTCCTAAGTCAA+CGG | - | chr1.1:80448117-80448136 | MS.gene93130:intron | 30.0% | |
| TTTAAGCGCAAATTCTACTT+AGG | + | chr1.1:80446836-80446855 | None:intergenic | 30.0% | |
| ! | AGAAAGCATATGTGATTCAT+TGG | - | chr1.1:80447746-80447765 | MS.gene93130:CDS | 30.0% |
| ! | AGGTGGATTCTATTGTAATT+TGG | + | chr1.1:80449810-80449829 | None:intergenic | 30.0% |
| ! | AGGTTTTTATAGGTTCTTCA+TGG | - | chr1.1:80450464-80450483 | MS.gene93130:intron | 30.0% |
| ! | CTGTTTCATATCCATCTTTT+CGG | - | chr1.1:80449227-80449246 | MS.gene93130:intron | 30.0% |
| ! | GAAAGCATATGTGATTCATT+GGG | - | chr1.1:80447747-80447766 | MS.gene93130:CDS | 30.0% |
| ! | GGTAGATTGTTTTCAATTCT+AGG | - | chr1.1:80448744-80448763 | MS.gene93130:intron | 30.0% |
| ! | TATAATTTTCCTTCACCCAT+TGG | - | chr1.1:80450188-80450207 | MS.gene93130:intron | 30.0% |
| ! | TCATTTTCTTAAGTTACTGC+CGG | + | chr1.1:80445774-80445793 | None:intergenic | 30.0% |
| ! | TTTGTTCACTTCAACTTGTT+AGG | - | chr1.1:80447081-80447100 | MS.gene93130:intron | 30.0% |
| !! | TTTTGACTACTTCAAAAAGG+TGG | + | chr1.1:80449827-80449846 | None:intergenic | 30.0% |
| !! | TTTTTCAACTTGAACAGAAC+CGG | + | chr1.1:80450029-80450048 | None:intergenic | 30.0% |
| !!! | AATGCATGTGCACTTTTTTT+CGG | + | chr1.1:80448967-80448986 | None:intergenic | 30.0% |
| !!! | ATTCACCGTTGATTTTATTG+TGG | - | chr1.1:80449365-80449384 | MS.gene93130:intron | 30.0% |
| AAAAATTGACCAATGGGTGA+AGG | + | chr1.1:80450200-80450219 | None:intergenic | 35.0% | |
| AACCAGTATTCACTTTGTGA+AGG | + | chr1.1:80446959-80446978 | None:intergenic | 35.0% | |
| AAGTCCAGAAATTCTTACAC+GGG | - | chr1.1:80448345-80448364 | MS.gene93130:CDS | 35.0% | |
| AATATGTCAAGTCAAGGGTA+AGG | - | chr1.1:80447894-80447913 | MS.gene93130:intron | 35.0% | |
| AATGTAAGAACCACAGGTTA+AGG | + | chr1.1:80449043-80449062 | None:intergenic | 35.0% | |
| AGCAGTTCTCAGAATGTTTA+GGG | + | chr1.1:80450605-80450624 | None:intergenic | 35.0% | |
| AGGGTCCACAATAAAATCAA+CGG | + | chr1.1:80449373-80449392 | None:intergenic | 35.0% | |
| AGTAACTTTATTGAACCTGC+AGG | + | chr1.1:80447993-80448012 | None:intergenic | 35.0% | |
| ATGTTTGACAACTCCAGTTT+AGG | + | chr1.1:80448032-80448051 | None:intergenic | 35.0% | |
| ATTAGATGGCTTAACAAGCT+GGG | - | chr1.1:80450377-80450396 | MS.gene93130:CDS | 35.0% | |
| CAAATACCACAAAAAGCTTC+AGG | + | chr1.1:80446138-80446157 | None:intergenic | 35.0% | |
| CAACTCGTTAGATTTGGATT+GGG | + | chr1.1:80447365-80447384 | None:intergenic | 35.0% | |
| CAAGTCCAGAAATTCTTACA+CGG | - | chr1.1:80448344-80448363 | MS.gene93130:CDS | 35.0% | |
| CATATGTGATTCATTGGGTT+CGG | - | chr1.1:80447752-80447771 | MS.gene93130:CDS | 35.0% | |
| CCGAAGGTAAATTATACTCT+AGG | - | chr1.1:80450444-80450463 | MS.gene93130:intron | 35.0% | |
| CCTCTACAGTAAGAAACAAA+AGG | + | chr1.1:80446354-80446373 | None:intergenic | 35.0% | |
| CTCACATCAGCTATTAATGT+GGG | + | chr1.1:80446578-80446597 | None:intergenic | 35.0% | |
| CTTTCTCAGCAGAAGAATAT+CGG | + | chr1.1:80447783-80447802 | None:intergenic | 35.0% | |
| GAATTTCGTCAATAGGCTTT+GGG | - | chr1.1:80449756-80449775 | MS.gene93130:intron | 35.0% | |
| GACAAAGGAAGAATACAAGA+AGG | - | chr1.1:80448052-80448071 | MS.gene93130:CDS | 35.0% | |
| GATTGTGGCAAAAGAGAATA+TGG | - | chr1.1:80445999-80446018 | MS.gene93130:CDS | 35.0% | |
| GGATGTCTAGTCTAGTAAAA+TGG | + | chr1.1:80448500-80448519 | None:intergenic | 35.0% | |
| GGGATAAAATGCATCTCTTA+TGG | - | chr1.1:80449562-80449581 | MS.gene93130:intron | 35.0% | |
| GGGGATTGTTTAGAAAAAAG+TGG | - | chr1.1:80450552-80450571 | MS.gene93130:intron | 35.0% | |
| GTATCAAAGCGAGTATTAGT+AGG | + | chr1.1:80450818-80450837 | None:intergenic | 35.0% | |
| GTATGAAAAGCTGAATTCAC+TGG | - | chr1.1:80446866-80446885 | MS.gene93130:intron | 35.0% | |
| GTTCTTCATGGTATAGTTTC+TGG | - | chr1.1:80450476-80450495 | MS.gene93130:intron | 35.0% | |
| GTTGATTGATCAGTTAGAAG+TGG | - | chr1.1:80450703-80450722 | MS.gene93130:intron | 35.0% | |
| TAACTGATCAATCAACTCCA+TGG | + | chr1.1:80450699-80450718 | None:intergenic | 35.0% | |
| TAGCAGTTCTCAGAATGTTT+AGG | + | chr1.1:80450606-80450625 | None:intergenic | 35.0% | |
| TATTAGATGGCTTAACAAGC+TGG | - | chr1.1:80450376-80450395 | MS.gene93130:CDS | 35.0% | |
| TCAACTCGTTAGATTTGGAT+TGG | + | chr1.1:80447366-80447385 | None:intergenic | 35.0% | |
| TGAAGATTCTGCAAGATCAA+TGG | + | chr1.1:80450978-80450997 | None:intergenic | 35.0% | |
| TGAATTTCGTCAATAGGCTT+TGG | - | chr1.1:80449755-80449774 | MS.gene93130:intron | 35.0% | |
| TGCAGAGAAAAATCACCAAT+CGG | - | chr1.1:80448587-80448606 | MS.gene93130:CDS | 35.0% | |
| TGGTTCTTACATTACATGGA+TGG | - | chr1.1:80449050-80449069 | MS.gene93130:intron | 35.0% | |
| TGTAAAACAGGTAAAAGCCA+TGG | - | chr1.1:80450679-80450698 | MS.gene93130:intron | 35.0% | |
| TTCCTTCACAAAGTGAATAC+TGG | - | chr1.1:80446954-80446973 | MS.gene93130:intron | 35.0% | |
| ! | ACATGCATTGGAAGCATATT+AGG | - | chr1.1:80448978-80448997 | MS.gene93130:intron | 35.0% |
| ! | CATATCTTTTTCCGGTGATA+TGG | - | chr1.1:80450760-80450779 | MS.gene93130:CDS | 35.0% |
| ! | GAAAAAAAGTGCACATGCAT+TGG | - | chr1.1:80448966-80448985 | MS.gene93130:intron | 35.0% |
| ! | GAAGCTTCAATCAGAAGTTT+TGG | - | chr1.1:80445837-80445856 | MS.gene93130:intron | 35.0% |
| ! | GATTTTATTGTGGACCCTTT+AGG | - | chr1.1:80449375-80449394 | MS.gene93130:intron | 35.0% |
| ! | GGTTACCTTCTAATTTTGGA+AGG | - | chr1.1:80446738-80446757 | MS.gene93130:intron | 35.0% |
| ! | GTGATTTTTCTCTGCAAAAG+AGG | + | chr1.1:80448583-80448602 | None:intergenic | 35.0% |
| ! | TAAACATTCTGAGAACTGCT+AGG | - | chr1.1:80450605-80450624 | MS.gene93130:intron | 35.0% |
| ! | TAATTTTCGATTTCAGCCCA+AGG | - | chr1.1:80447964-80447983 | MS.gene93130:intron | 35.0% |
| ! | TTCTAGAAGCTTCGAAGAAA+GGG | - | chr1.1:80445544-80445563 | MS.gene93130:CDS | 35.0% |
| ! | TTTCTAGAAGCTTCGAAGAA+AGG | - | chr1.1:80445543-80445562 | MS.gene93130:CDS | 35.0% |
| ! | TTTTCAACTTGAACAGAACC+GGG | + | chr1.1:80450028-80450047 | None:intergenic | 35.0% |
| !! | ATCCATTGGGTTGGATAAAT+TGG | - | chr1.1:80450531-80450550 | MS.gene93130:intron | 35.0% |
| !! | CCTTTTGTTTCTTACTGTAG+AGG | - | chr1.1:80446351-80446370 | MS.gene93130:CDS | 35.0% |
| !! | CTTCAGTTTTGACATCCATT+GGG | - | chr1.1:80450518-80450537 | MS.gene93130:intron | 35.0% |
| !! | CTTGCACATATTCTAGTTTC+TGG | + | chr1.1:80450253-80450272 | None:intergenic | 35.0% |
| !! | GGTAAGGATGACTTTAGTTT+TGG | - | chr1.1:80447910-80447929 | MS.gene93130:intron | 35.0% |
| !! | TCATGGTATAGTTTCTGGTA+TGG | - | chr1.1:80450481-80450500 | MS.gene93130:intron | 35.0% |
| !! | TCCATTGGGTTGGATAAATT+GGG | - | chr1.1:80450532-80450551 | MS.gene93130:intron | 35.0% |
| !! | TTCTAGTTTCTGGATGCAAT+AGG | + | chr1.1:80450243-80450262 | None:intergenic | 35.0% |
| !! | TTTAGAAAAAAGTGGTGGGT+GGG | - | chr1.1:80450560-80450579 | MS.gene93130:intron | 35.0% |
| !! | TTTGGAGGCATATCTTTTTC+CGG | - | chr1.1:80450752-80450771 | MS.gene93130:CDS | 35.0% |
| !!! | AATTGTCTTGTTTTCAGCTG+AGG | + | chr1.1:80447530-80447549 | None:intergenic | 35.0% |
| !!! | ATGCATGTGCACTTTTTTTC+GGG | + | chr1.1:80448966-80448985 | None:intergenic | 35.0% |
| !!! | CTGAGGTTTTTTCTGTTCTT+TGG | - | chr1.1:80445884-80445903 | MS.gene93130:intron | 35.0% |
| !!! | TTTGGGTGCTTTTTAAGTAC+TGG | + | chr1.1:80446284-80446303 | None:intergenic | 35.0% |
| AAAATCTTCTCTAGCGTGTG+AGG | + | chr1.1:80447061-80447080 | None:intergenic | 40.0% | |
| AAAATTGTGCCCATCTTTGC+AGG | - | chr1.1:80450341-80450360 | MS.gene93130:CDS | 40.0% | |
| AAATCTTCTCTAGCGTGTGA+GGG | + | chr1.1:80447060-80447079 | None:intergenic | 40.0% | |
| AACTAGAGGAAGAGATTGAG+AGG | + | chr1.1:80445508-80445527 | None:intergenic | 40.0% | |
| AAGAGCAATGTCCATATCAC+CGG | + | chr1.1:80450774-80450793 | None:intergenic | 40.0% | |
| AAGTTACTCACTCGTCTCTT+TGG | - | chr1.1:80448005-80448024 | MS.gene93130:intron | 40.0% | |
| AATCACATATGCTTTCTGGG+TGG | + | chr1.1:80447743-80447762 | None:intergenic | 40.0% | |
| AATTCTTACACGGGTGAAGA+AGG | - | chr1.1:80448354-80448373 | MS.gene93130:CDS | 40.0% | |
| ACATGTAATGCTGGTCGATT+TGG | - | chr1.1:80448702-80448721 | MS.gene93130:intron | 40.0% | |
| AGAGCTCTGTAGACTTCAAA+AGG | + | chr1.1:80448167-80448186 | None:intergenic | 40.0% | |
| AGAGCTGATGTGCATAACAT+GGG | + | chr1.1:80450074-80450093 | None:intergenic | 40.0% | |
| AGCTGGAAACTCTTGTATCT+AGG | - | chr1.1:80447824-80447843 | MS.gene93130:intron | 40.0% | |
| AGGGGTAATGAACAAGAACA+AGG | + | chr1.1:80448467-80448486 | None:intergenic | 40.0% | |
| AGTCGCCTTCCAAAATTAGA+AGG | + | chr1.1:80446746-80446765 | None:intergenic | 40.0% | |
| ATACAAGAAGGCAGTATTGC+AGG | - | chr1.1:80448064-80448083 | MS.gene93130:CDS | 40.0% | |
| ATGTCAACAAACGCAGAGAA+TGG | - | chr1.1:80450855-80450874 | MS.gene93130:CDS | 40.0% | |
| ATGTCAGAATAACCACCCTA+AGG | + | chr1.1:80449323-80449342 | None:intergenic | 40.0% | |
| ATGTGCAGAACATGTAATGC+TGG | - | chr1.1:80448693-80448712 | MS.gene93130:intron | 40.0% | |
| ATTTCACACACACACACAGT+GGG | + | chr1.1:80447505-80447524 | None:intergenic | 40.0% | |
| CAAAAGGGTCTGCAAAAGTT+CGG | + | chr1.1:80448151-80448170 | None:intergenic | 40.0% | |
| CATTAGCTGTGCTGTAAAAC+AGG | - | chr1.1:80450667-80450686 | MS.gene93130:intron | 40.0% | |
| CCAATGGATGTCAAAACTGA+AGG | + | chr1.1:80450520-80450539 | None:intergenic | 40.0% | |
| CCATGTAATGTAAGAACCAC+AGG | + | chr1.1:80449049-80449068 | None:intergenic | 40.0% | |
| CCTGCATATCAACACAACAA+TGG | + | chr1.1:80449997-80450016 | None:intergenic | 40.0% | |
| CCTGTGGTTCTTACATTACA+TGG | - | chr1.1:80449046-80449065 | MS.gene93130:intron | 40.0% | |
| CGATTTGCAAGTATAGTCCA+CGG | - | chr1.1:80446789-80446808 | MS.gene93130:intron | 40.0% | |
| CTACTTAGGACCACTTTGAT+AGG | + | chr1.1:80446822-80446841 | None:intergenic | 40.0% | |
| GAAAATATGCAACGGTACAG+AGG | + | chr1.1:80445579-80445598 | None:intergenic | 40.0% | |
| GAACAGAAAAAACCTCAGAG+AGG | + | chr1.1:80445882-80445901 | None:intergenic | 40.0% | |
| GAATAGCATTCCTTAACCTG+TGG | - | chr1.1:80449030-80449049 | MS.gene93130:intron | 40.0% | |
| GAGCTCTGTAGACTTCAAAA+GGG | + | chr1.1:80448166-80448185 | None:intergenic | 40.0% | |
| GATTTGGGGAGAAATGATGT+TGG | - | chr1.1:80448718-80448737 | MS.gene93130:intron | 40.0% | |
| GCAGATTCAAAGAGAAAGCT+AGG | + | chr1.1:80445663-80445682 | None:intergenic | 40.0% | |
| GCTCACATCAGCTATTAATG+TGG | + | chr1.1:80446579-80446598 | None:intergenic | 40.0% | |
| GCTGGAAACTCTTGTATCTA+GGG | - | chr1.1:80447825-80447844 | MS.gene93130:intron | 40.0% | |
| GGAAGATCATCAATGAGTTG+AGG | + | chr1.1:80446117-80446136 | None:intergenic | 40.0% | |
| GGAGTTGTCAAACATGACAA+AGG | - | chr1.1:80448037-80448056 | MS.gene93130:intron | 40.0% | |
| GGATGCAATAGGATATTGCA+AGG | + | chr1.1:80450232-80450251 | None:intergenic | 40.0% | |
| GGTGATCGGAAAATATGCAA+CGG | + | chr1.1:80445587-80445606 | None:intergenic | 40.0% | |
| GTAGTGTTTATGAGCAGCAA+CGG | + | chr1.1:80448944-80448963 | None:intergenic | 40.0% | |
| GTCATTGTTTATCCTCTCTG+AGG | - | chr1.1:80445867-80445886 | MS.gene93130:intron | 40.0% | |
| TAAGACAGAGGAAATTGTGC+TGG | - | chr1.1:80446050-80446069 | MS.gene93130:intron | 40.0% | |
| TAAGCCATCTAATAACTCCC+CGG | + | chr1.1:80450370-80450389 | None:intergenic | 40.0% | |
| TAGAGCTGATGTGCATAACA+TGG | + | chr1.1:80450075-80450094 | None:intergenic | 40.0% | |
| TCAGGTGAGATTGGTGAAAT+TGG | + | chr1.1:80448235-80448254 | None:intergenic | 40.0% | |
| TGATACGATGTACTCGTACA+AGG | - | chr1.1:80450832-80450851 | MS.gene93130:CDS | 40.0% | |
| TGATTCACATCGGCATTTCA+TGG | + | chr1.1:80449457-80449476 | None:intergenic | 40.0% | |
| TGGAGTCTAGTAAAACCAGA+AGG | + | chr1.1:80450292-80450311 | None:intergenic | 40.0% | |
| TGTAATCACGTGTGTTCGTA+TGG | - | chr1.1:80445804-80445823 | MS.gene93130:intron | 40.0% | |
| TTACCTGTTGGTACAGTTAG+CGG | - | chr1.1:80450417-80450436 | MS.gene93130:CDS | 40.0% | |
| TTACTCCGGTTCTTGCTTAT+CGG | - | chr1.1:80445607-80445626 | MS.gene93130:CDS | 40.0% | |
| TTCACCCGTGTAAGAATTTC+TGG | + | chr1.1:80448352-80448371 | None:intergenic | 40.0% | |
| TTGGTTGTTGGATTGCGTTA+GGG | - | chr1.1:80445940-80445959 | MS.gene93130:intron | 40.0% | |
| TTTAAGCAGCCAAAATGGGA+TGG | + | chr1.1:80449253-80449272 | None:intergenic | 40.0% | |
| TTTGCCACAATCTCCATACA+CGG | + | chr1.1:80445991-80446010 | None:intergenic | 40.0% | |
| TTTGGTTGTTGGATTGCGTT+AGG | - | chr1.1:80445939-80445958 | MS.gene93130:intron | 40.0% | |
| ! | ATCCTGGGCATTTACCATTT+TGG | - | chr1.1:80447678-80447697 | MS.gene93130:intron | 40.0% |
| ! | ATTTTCCGATCACCTTACTC+CGG | - | chr1.1:80445593-80445612 | MS.gene93130:CDS | 40.0% |
| ! | CATGTAATGCTGGTCGATTT+GGG | - | chr1.1:80448703-80448722 | MS.gene93130:intron | 40.0% |
| ! | CCATTGTTGTGTTGATATGC+AGG | - | chr1.1:80449994-80450013 | MS.gene93130:intron | 40.0% |
| ! | GAATATTGCATTGATGGACC+TGG | - | chr1.1:80447112-80447131 | MS.gene93130:intron | 40.0% |
| ! | GATCTTCCTGAAGCTTTTTG+TGG | - | chr1.1:80446129-80446148 | MS.gene93130:intron | 40.0% |
| ! | GGACGGTTACCTTCTAATTT+TGG | - | chr1.1:80446734-80446753 | MS.gene93130:intron | 40.0% |
| ! | GTTTAGAAAAAAGTGGTGGG+TGG | - | chr1.1:80450559-80450578 | MS.gene93130:intron | 40.0% |
| ! | TGCTAGGTTGAGTCTTTGTT+TGG | - | chr1.1:80450621-80450640 | MS.gene93130:intron | 40.0% |
| ! | TTACTGTAGAGGTGCACATA+GGG | - | chr1.1:80446362-80446381 | MS.gene93130:CDS | 40.0% |
| ! | TTGGAAGCATATTAGGTCAG+TGG | - | chr1.1:80448985-80449004 | MS.gene93130:intron | 40.0% |
| !! | AAACGTGTTGATGGCAAAGA+AGG | + | chr1.1:80447616-80447635 | None:intergenic | 40.0% |
| !! | AAGTTTTGGTGGCACAACAA+TGG | + | chr1.1:80449425-80449444 | None:intergenic | 40.0% |
| !! | ACTATAATGGACCATGAGGA+AGG | - | chr1.1:80446024-80446043 | MS.gene93130:CDS | 40.0% |
| !! | AGTTTTGACATCCATTGGGT+TGG | - | chr1.1:80450522-80450541 | MS.gene93130:intron | 40.0% |
| !! | ATCTATAGGGGCATTAGCAA+AGG | + | chr1.1:80447253-80447272 | None:intergenic | 40.0% |
| !! | ATGTAATGCTGGTCGATTTG+GGG | - | chr1.1:80448704-80448723 | MS.gene93130:intron | 40.0% |
| !! | CCATTGGGTTGGATAAATTG+GGG | - | chr1.1:80450533-80450552 | MS.gene93130:intron | 40.0% |
| !! | CCTTCAGTTTTGACATCCAT+TGG | - | chr1.1:80450517-80450536 | MS.gene93130:intron | 40.0% |
| !! | CTATAATGGACCATGAGGAA+GGG | - | chr1.1:80446025-80446044 | MS.gene93130:CDS | 40.0% |
| !! | GGTTACTATAATGGACCATG+AGG | - | chr1.1:80446020-80446039 | MS.gene93130:CDS | 40.0% |
| !! | GTGGAGTGTTTTACTGTTTG+AGG | - | chr1.1:80449004-80449023 | MS.gene93130:intron | 40.0% |
| !! | GTTGTTTTCGTAAGCTATCG+TGG | + | chr1.1:80446513-80446532 | None:intergenic | 40.0% |
| !! | TCTATAGGGGCATTAGCAAA+GGG | + | chr1.1:80447252-80447271 | None:intergenic | 40.0% |
| !! | TTAGAAAAAAGTGGTGGGTG+GGG | - | chr1.1:80450561-80450580 | MS.gene93130:intron | 40.0% |
| !!! | CATGGAGGTTGATGAAGTTT+TGG | + | chr1.1:80449439-80449458 | None:intergenic | 40.0% |
| AAATGGGATGGCCGAAAAGA+TGG | + | chr1.1:80449241-80449260 | None:intergenic | 45.0% | |
| AACCACCCTAAGGAGCTTTA+AGG | + | chr1.1:80449313-80449332 | None:intergenic | 45.0% | |
| AACTTGAACAGAACCGGGTT+TGG | + | chr1.1:80450023-80450042 | None:intergenic | 45.0% | |
| AAGAACCGGAGTAAGGTGAT+CGG | + | chr1.1:80445601-80445620 | None:intergenic | 45.0% | |
| AAGATCAATGGCACGTGCAA+GGG | + | chr1.1:80450966-80450985 | None:intergenic | 45.0% | |
| AAGGCCTCTGTCATCTATAG+GGG | + | chr1.1:80447265-80447284 | None:intergenic | 45.0% | |
| AAGGCGACTTCTGTTGTCAT+TGG | - | chr1.1:80446757-80446776 | MS.gene93130:intron | 45.0% | |
| AATGCCCCTATAGATGACAG+AGG | - | chr1.1:80447258-80447277 | MS.gene93130:intron | 45.0% | |
| ACACACTGACACATTGACAC+CGG | - | chr1.1:80445752-80445771 | MS.gene93130:intron | 45.0% | |
| ACCAAACAGTGAAGCAGCTA+TGG | + | chr1.1:80449903-80449922 | None:intergenic | 45.0% | |
| AGACACCGATAAGCAAGAAC+CGG | + | chr1.1:80445615-80445634 | None:intergenic | 45.0% | |
| AGCAACCAAAATACTCCCTC+TGG | + | chr1.1:80448323-80448342 | None:intergenic | 45.0% | |
| AGGTAACCTTGTGCAACAGT+TGG | - | chr1.1:80448374-80448393 | MS.gene93130:CDS | 45.0% | |
| ATCCTACGAGGAATGACCAA+AGG | + | chr1.1:80446078-80446097 | None:intergenic | 45.0% | |
| ATCCTTTGGTCATTCCTCGT+AGG | - | chr1.1:80446073-80446092 | MS.gene93130:intron | 45.0% | |
| ATCTGGAAACCGAGATGGTT+GGG | + | chr1.1:80445449-80445468 | None:intergenic | 45.0% | |
| CAACGGATCACAGTTACGAA+TGG | + | chr1.1:80448927-80448946 | None:intergenic | 45.0% | |
| CACTTCTCCATAATCCTACG+AGG | + | chr1.1:80446090-80446109 | None:intergenic | 45.0% | |
| CATTCTCTTTGCTCATCAGC+TGG | + | chr1.1:80450926-80450945 | None:intergenic | 45.0% | |
| CCCCAATTTATCCAACCCAA+TGG | + | chr1.1:80450536-80450555 | None:intergenic | 45.0% | |
| CTCGTAGGATTATGGAGAAG+TGG | - | chr1.1:80446088-80446107 | MS.gene93130:intron | 45.0% | |
| CTCTTTGAATCTGCTGAACC+TGG | - | chr1.1:80445669-80445688 | MS.gene93130:CDS | 45.0% | |
| CTTGTCCAATCCATCGTTGA+GGG | + | chr1.1:80447806-80447825 | None:intergenic | 45.0% | |
| CTTGTCTCGAGTGAGAAGTA+TGG | - | chr1.1:80449285-80449304 | MS.gene93130:intron | 45.0% | |
| GAAGGCCTCTGTCATCTATA+GGG | + | chr1.1:80447266-80447285 | None:intergenic | 45.0% | |
| GACCAAAATGGTAAATGCCC+AGG | + | chr1.1:80447683-80447702 | None:intergenic | 45.0% | |
| GATAAGCAAGAACCGGAGTA+AGG | + | chr1.1:80445608-80445627 | None:intergenic | 45.0% | |
| GATTTCACACACACACACAG+TGG | + | chr1.1:80447506-80447525 | None:intergenic | 45.0% | |
| GGAAATTGTGCTGGATCCTT+TGG | - | chr1.1:80446059-80446078 | MS.gene93130:intron | 45.0% | |
| GGGGAGAAATGATGTTGGAA+AGG | - | chr1.1:80448723-80448742 | MS.gene93130:intron | 45.0% | |
| GGTCATTCCTCGTAGGATTA+TGG | - | chr1.1:80446080-80446099 | MS.gene93130:intron | 45.0% | |
| GTAACCGGGGAGTTATTAGA+TGG | - | chr1.1:80450363-80450382 | MS.gene93130:CDS | 45.0% | |
| TAAAGGCCCAGATGAACATC+AGG | + | chr1.1:80447288-80447307 | None:intergenic | 45.0% | |
| TAACAAGCTGGGATGCATTG+CGG | - | chr1.1:80450388-80450407 | MS.gene93130:CDS | 45.0% | |
| TCCATAGCTGCTTCACTGTT+TGG | - | chr1.1:80449899-80449918 | MS.gene93130:intron | 45.0% | |
| TCGTCTCTTTGGTCCTAAAC+TGG | - | chr1.1:80448016-80448035 | MS.gene93130:intron | 45.0% | |
| TCTTCTAACAGTCCCAGCAA+GGG | + | chr1.1:80448614-80448633 | None:intergenic | 45.0% | |
| TGATGGTAGGTAGACAGTTG+AGG | - | chr1.1:80447463-80447482 | MS.gene93130:intron | 45.0% | |
| TGTATCGTTCCCAACCATCT+CGG | - | chr1.1:80445437-80445456 | MS.gene93130:CDS | 45.0% | |
| TTCACATCGGCATTTCATGG+AGG | + | chr1.1:80449454-80449473 | None:intergenic | 45.0% | |
| TTGCTGGGACTGTTAGAAGA+GGG | - | chr1.1:80448614-80448633 | MS.gene93130:CDS | 45.0% | |
| TTGTTGGATTGCGTTAGGGA+AGG | - | chr1.1:80445944-80445963 | MS.gene93130:intron | 45.0% | |
| TTTCACACACACACACAGTG+GGG | + | chr1.1:80447504-80447523 | None:intergenic | 45.0% | |
| ! | ACCACCCTAAGGAGCTTTAA+GGG | + | chr1.1:80449312-80449331 | None:intergenic | 45.0% |
| ! | CTCGTTAGATTTGGATTGGG+CGG | + | chr1.1:80447362-80447381 | None:intergenic | 45.0% |
| ! | CTTACTGTAGAGGTGCACAT+AGG | - | chr1.1:80446361-80446380 | MS.gene93130:CDS | 45.0% |
| ! | GATTGAGAGGCGCATTTGAT+CGG | + | chr1.1:80445495-80445514 | None:intergenic | 45.0% |
| ! | TAGGGAAGGTATAGTGTGGT+GGG | - | chr1.1:80445958-80445977 | MS.gene93130:intron | 45.0% |
| ! | TAGTTAGCTAGAGTGCCTTC+TGG | - | chr1.1:80450274-80450293 | MS.gene93130:CDS | 45.0% |
| ! | TCGTGGTTTGCCAATAGCAA+GGG | + | chr1.1:80446678-80446697 | None:intergenic | 45.0% |
| ! | TCGTTAGATTTGGATTGGGC+GGG | + | chr1.1:80447361-80447380 | None:intergenic | 45.0% |
| ! | TCTTTTCGGCCATCCCATTT+TGG | - | chr1.1:80449241-80449260 | MS.gene93130:intron | 45.0% |
| ! | TGTTCTTTTCGCAGGTGGTT+GGG | - | chr1.1:80447176-80447195 | MS.gene93130:intron | 45.0% |
| ! | TTAGGGAAGGTATAGTGTGG+TGG | - | chr1.1:80445957-80445976 | MS.gene93130:intron | 45.0% |
| !! | AGCAAGGGAAAAGCCTTGTT+TGG | + | chr1.1:80446663-80446682 | None:intergenic | 45.0% |
| !! | CAAGGCTTTTCCCTTGCTAT+TGG | - | chr1.1:80446665-80446684 | MS.gene93130:intron | 45.0% |
| !!! | GGAGGTTGATGAAGTTTTGG+TGG | + | chr1.1:80449436-80449455 | None:intergenic | 45.0% |
| AACAAGCTGGGATGCATTGC+GGG | - | chr1.1:80450389-80450408 | MS.gene93130:CDS | 50.0% | |
| AACCGTCCTTTCCGTTCTCA+AGG | + | chr1.1:80446722-80446741 | None:intergenic | 50.0% | |
| ACAAGGCCAACTGTTGCACA+AGG | + | chr1.1:80448383-80448402 | None:intergenic | 50.0% | |
| ACATACTCGTATCAGGCCAG+AGG | - | chr1.1:80448304-80448323 | MS.gene93130:CDS | 50.0% | |
| ACGACACGGTAAAACACAGC+AGG | + | chr1.1:80447157-80447176 | None:intergenic | 50.0% | |
| ACGGTAGTTGGAGTTCCATC+TGG | + | chr1.1:80445472-80445491 | None:intergenic | 50.0% | |
| AGACGTGGTCCATATAGTGG+CGG | - | chr1.1:80450728-80450747 | MS.gene93130:CDS | 50.0% | |
| AGCCTTGAGAACGGAAAGGA+CGG | - | chr1.1:80446717-80446736 | MS.gene93130:intron | 50.0% | |
| AGGCCTTCCTGATGTTCATC+TGG | - | chr1.1:80447278-80447297 | MS.gene93130:intron | 50.0% | |
| AGGTGCACATAGGGCATGTT+TGG | - | chr1.1:80446371-80446390 | MS.gene93130:CDS | 50.0% | |
| ATGGCCCCTTAAAGCTCCTT+AGG | - | chr1.1:80449304-80449323 | MS.gene93130:intron | 50.0% | |
| ATGTGTCAGTGTGTCGTGTC+TGG | + | chr1.1:80445746-80445765 | None:intergenic | 50.0% | |
| CAAGATCAATGGCACGTGCA+AGG | + | chr1.1:80450967-80450986 | None:intergenic | 50.0% | |
| CAGTGGGGGAGAATGAATCA+TGG | + | chr1.1:80447489-80447508 | None:intergenic | 50.0% | |
| CAGTTAGAAGTGGCAAGACG+TGG | - | chr1.1:80450713-80450732 | MS.gene93130:CDS | 50.0% | |
| CATACTCGTATCAGGCCAGA+GGG | - | chr1.1:80448305-80448324 | MS.gene93130:CDS | 50.0% | |
| CCTCCAAATCCGCCACTATA+TGG | + | chr1.1:80450740-80450759 | None:intergenic | 50.0% | |
| CCTGCGAAAAGAACACGACA+CGG | + | chr1.1:80447171-80447190 | None:intergenic | 50.0% | |
| CGGTCGACTACCTATCAAAG+TGG | - | chr1.1:80446809-80446828 | MS.gene93130:intron | 50.0% | |
| CTCTTCTAACAGTCCCAGCA+AGG | + | chr1.1:80448615-80448634 | None:intergenic | 50.0% | |
| CTTCTAACAGTCCCAGCAAG+GGG | + | chr1.1:80448613-80448632 | None:intergenic | 50.0% | |
| CTTGCTGGGACTGTTAGAAG+AGG | - | chr1.1:80448613-80448632 | MS.gene93130:CDS | 50.0% | |
| CTTTGATAGGTAGTCGACCG+TGG | + | chr1.1:80446809-80446828 | None:intergenic | 50.0% | |
| GAAAGCCCTCAACGATGGAT+TGG | - | chr1.1:80447798-80447817 | MS.gene93130:CDS | 50.0% | |
| GACGGTGACTTGATAAGTCG+TGG | + | chr1.1:80446695-80446714 | None:intergenic | 50.0% | |
| GATATGCAGGTCTCCAAACC+CGG | - | chr1.1:80450007-80450026 | MS.gene93130:intron | 50.0% | |
| GATCTGGAAACCGAGATGGT+TGG | + | chr1.1:80445450-80445469 | None:intergenic | 50.0% | |
| GCAACCGTGTATGGAGATTG+TGG | - | chr1.1:80445984-80446003 | MS.gene93130:CDS | 50.0% | |
| GCAAGACGTGGTCCATATAG+TGG | - | chr1.1:80450725-80450744 | MS.gene93130:CDS | 50.0% | |
| GCATTTGATCGGACGGTAGT+TGG | + | chr1.1:80445484-80445503 | None:intergenic | 50.0% | |
| GCGTGCTCAGGATAAGAACA+CGG | + | chr1.1:80449111-80449130 | None:intergenic | 50.0% | |
| GCTTGTCCAATCCATCGTTG+AGG | + | chr1.1:80447807-80447826 | None:intergenic | 50.0% | |
| GGAAGGCCTCTGTCATCTAT+AGG | + | chr1.1:80447267-80447286 | None:intergenic | 50.0% | |
| GGCCTTCCTGATGTTCATCT+GGG | - | chr1.1:80447279-80447298 | MS.gene93130:intron | 50.0% | |
| GTGCTAGAAACGTGAAGACC+AGG | + | chr1.1:80445690-80445709 | None:intergenic | 50.0% | |
| GTTGGAGTTCCATCTGGATC+TGG | + | chr1.1:80445466-80445485 | None:intergenic | 50.0% | |
| TCTCAGCCTTGAGAACGGAA+AGG | - | chr1.1:80446713-80446732 | MS.gene93130:intron | 50.0% | |
| TCTCGGTTTCCAGATCCAGA+TGG | - | chr1.1:80445454-80445473 | MS.gene93130:CDS | 50.0% | |
| TCTGGATCTGGAAACCGAGA+TGG | + | chr1.1:80445454-80445473 | None:intergenic | 50.0% | |
| TGCCCATCTTTGCAGGTAAC+CGG | - | chr1.1:80450348-80450367 | MS.gene93130:CDS | 50.0% | |
| TGGACATTGCTCTTGCTCTG+AGG | - | chr1.1:80450780-80450799 | MS.gene93130:CDS | 50.0% | |
| TGGCCCCTTAAAGCTCCTTA+GGG | - | chr1.1:80449305-80449324 | MS.gene93130:intron | 50.0% | |
| TTCACACACACACACAGTGG+GGG | + | chr1.1:80447503-80447522 | None:intergenic | 50.0% | |
| TTCCGTTCTCAAGGCTGAGA+CGG | + | chr1.1:80446713-80446732 | None:intergenic | 50.0% | |
| ! | GCAGGCTAAAGAGCACATAC+TGG | - | chr1.1:80448082-80448101 | MS.gene93130:CDS | 50.0% |
| ! | GCGTTAGGGAAGGTATAGTG+TGG | - | chr1.1:80445954-80445973 | MS.gene93130:intron | 50.0% |
| ! | GCTAAAGAGCACATACTGGC+TGG | - | chr1.1:80448086-80448105 | MS.gene93130:intron | 50.0% |
| ! | GTCGTGGTTTGCCAATAGCA+AGG | + | chr1.1:80446679-80446698 | None:intergenic | 50.0% |
| ! | GTGTTCTTTTCGCAGGTGGT+TGG | - | chr1.1:80447175-80447194 | MS.gene93130:intron | 50.0% |
| ! | TGTCGTGTTCTTTTCGCAGG+TGG | - | chr1.1:80447171-80447190 | MS.gene93130:intron | 50.0% |
| !! | AGAATGGATTGCCCATCTCC+AGG | - | chr1.1:80450871-80450890 | MS.gene93130:CDS | 50.0% |
| !! | CAACGATGGATTGGACAAGC+TGG | - | chr1.1:80447807-80447826 | MS.gene93130:CDS | 50.0% |
| !! | CCACCCTAAGGAGCTTTAAG+GGG | + | chr1.1:80449311-80449330 | None:intergenic | 50.0% |
| !! | CCATATAGTGGCGGATTTGG+AGG | - | chr1.1:80450737-80450756 | MS.gene93130:CDS | 50.0% |
| !! | GGTCCATATAGTGGCGGATT+TGG | - | chr1.1:80450734-80450753 | MS.gene93130:CDS | 50.0% |
| !! | TGCTCTTGCTCTGAGGACAA+TGG | - | chr1.1:80450787-80450806 | MS.gene93130:CDS | 50.0% |
| !!! | TCAGGCCAGAGGGAGTATTT+TGG | - | chr1.1:80448315-80448334 | MS.gene93130:CDS | 50.0% |
| ATTGAACCTGCAGGCAGCCT+TGG | + | chr1.1:80447984-80448003 | None:intergenic | 55.0% | |
| CACCGTCTCAGCCTTGAGAA+CGG | - | chr1.1:80446708-80446727 | MS.gene93130:intron | 55.0% | |
| CCCATCTTTGCAGGTAACCG+GGG | - | chr1.1:80450350-80450369 | MS.gene93130:CDS | 55.0% | |
| CCCCGGTTACCTGCAAAGAT+GGG | + | chr1.1:80450353-80450372 | None:intergenic | 55.0% | |
| CCCCTTAAAGCTCCTTAGGG+TGG | - | chr1.1:80449308-80449327 | MS.gene93130:intron | 55.0% | |
| CTGTCTTACGCCCTTCCTCA+TGG | + | chr1.1:80446038-80446057 | None:intergenic | 55.0% | |
| GCCCATCTTTGCAGGTAACC+GGG | - | chr1.1:80450349-80450368 | MS.gene93130:CDS | 55.0% | |
| GCTCCGCTAACTGTACCAAC+AGG | + | chr1.1:80450423-80450442 | None:intergenic | 55.0% | |
| GCTGAGAAAGCCCTCAACGA+TGG | - | chr1.1:80447793-80447812 | MS.gene93130:CDS | 55.0% | |
| GGCCCAGATGAACATCAGGA+AGG | + | chr1.1:80447284-80447303 | None:intergenic | 55.0% | |
| TAAATCCTGCACGCGTGCTC+AGG | + | chr1.1:80449123-80449142 | None:intergenic | 55.0% | |
| TCCCCGGTTACCTGCAAAGA+TGG | + | chr1.1:80450354-80450373 | None:intergenic | 55.0% | |
| TTGAACCTGCAGGCAGCCTT+GGG | + | chr1.1:80447983-80448002 | None:intergenic | 55.0% | |
| ! | CCGTGTCGTGTTCTTTTCGC+AGG | - | chr1.1:80447168-80447187 | MS.gene93130:intron | 55.0% |
| ! | CTTTTCGCAGGTGGTTGGGT+GGG | - | chr1.1:80447180-80447199 | MS.gene93130:intron | 55.0% |
| ! | GAGAGGCGCATTTGATCGGA+CGG | + | chr1.1:80445491-80445510 | None:intergenic | 55.0% |
| ! | TCTTTTCGCAGGTGGTTGGG+TGG | - | chr1.1:80447179-80447198 | MS.gene93130:intron | 55.0% |
| ! | TGAGGAAGGGCGTAAGACAG+AGG | - | chr1.1:80446038-80446057 | MS.gene93130:CDS | 55.0% |
| ! | TTGCGGGCTGCATTACCTGT+TGG | - | chr1.1:80450405-80450424 | MS.gene93130:CDS | 55.0% |
| !! | GGCGCTCAAACCGTTGACTT+AGG | + | chr1.1:80448130-80448149 | None:intergenic | 55.0% |
| ATCACCAATCGGCCCCTTGC+TGG | - | chr1.1:80448598-80448617 | MS.gene93130:CDS | 60.0% | |
| CCACAATTCCTGCTCCAGCC+TGG | + | chr1.1:80450892-80450911 | None:intergenic | 60.0% | |
| CCAGGCTGGAGCAGGAATTG+TGG | - | chr1.1:80450889-80450908 | MS.gene93130:CDS | 60.0% | |
| CTTATCCTGAGCACGCGTGC+AGG | - | chr1.1:80449115-80449134 | MS.gene93130:CDS | 60.0% | |
| TCACCAATCGGCCCCTTGCT+GGG | - | chr1.1:80448599-80448618 | MS.gene93130:CDS | 60.0% | |
| TCCTGCTCCAGCCTGGAGAT+GGG | + | chr1.1:80450885-80450904 | None:intergenic | 60.0% | |
| TGGATTGCCCATCTCCAGGC+TGG | - | chr1.1:80450875-80450894 | MS.gene93130:CDS | 60.0% | |
| TTCCTGCTCCAGCCTGGAGA+TGG | + | chr1.1:80450886-80450905 | None:intergenic | 60.0% | |
| !! | TACAGTTAGCGGAGCGCCGA+AGG | - | chr1.1:80450428-80450447 | MS.gene93130:CDS | 60.0% |
| AGTCCCAGCAAGGGGCCGAT+TGG | + | chr1.1:80448605-80448624 | None:intergenic | 65.0% | |
| TTCAGCCCAAGGCTGCCTGC+AGG | - | chr1.1:80447975-80447994 | MS.gene93130:intron | 65.0% | |
| ! | GGTGGGAGCGCAACCGTGTA+TGG | - | chr1.1:80445975-80445994 | MS.gene93130:CDS | 65.0% |
| GCCCATCTCCAGGCTGGAGC+AGG | - | chr1.1:80450881-80450900 | MS.gene93130:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 80445411 | 80451012 | 80445411 | ID=MS.gene93130 |
| chr1.1 | mRNA | 80445411 | 80451012 | 80445411 | ID=MS.gene93130.t1;Parent=MS.gene93130 |
| chr1.1 | exon | 80450713 | 80451012 | 80450713 | ID=MS.gene93130.t1.exon1;Parent=MS.gene93130.t1 |
| chr1.1 | CDS | 80450713 | 80451012 | 80450713 | ID=cds.MS.gene93130.t1;Parent=MS.gene93130.t1 |
| chr1.1 | exon | 80450273 | 80450462 | 80450273 | ID=MS.gene93130.t1.exon2;Parent=MS.gene93130.t1 |
| chr1.1 | CDS | 80450273 | 80450462 | 80450273 | ID=cds.MS.gene93130.t1;Parent=MS.gene93130.t1 |
| chr1.1 | exon | 80449082 | 80449233 | 80449082 | ID=MS.gene93130.t1.exon3;Parent=MS.gene93130.t1 |
| chr1.1 | CDS | 80449082 | 80449233 | 80449082 | ID=cds.MS.gene93130.t1;Parent=MS.gene93130.t1 |
| chr1.1 | exon | 80448560 | 80448675 | 80448560 | ID=MS.gene93130.t1.exon4;Parent=MS.gene93130.t1 |
| chr1.1 | CDS | 80448560 | 80448675 | 80448560 | ID=cds.MS.gene93130.t1;Parent=MS.gene93130.t1 |
| chr1.1 | exon | 80448197 | 80448443 | 80448197 | ID=MS.gene93130.t1.exon5;Parent=MS.gene93130.t1 |
| chr1.1 | CDS | 80448197 | 80448443 | 80448197 | ID=cds.MS.gene93130.t1;Parent=MS.gene93130.t1 |
| chr1.1 | exon | 80448048 | 80448104 | 80448048 | ID=MS.gene93130.t1.exon6;Parent=MS.gene93130.t1 |
| chr1.1 | CDS | 80448048 | 80448104 | 80448048 | ID=cds.MS.gene93130.t1;Parent=MS.gene93130.t1 |
| chr1.1 | exon | 80447679 | 80447831 | 80447679 | ID=MS.gene93130.t1.exon7;Parent=MS.gene93130.t1 |
| chr1.1 | CDS | 80447679 | 80447831 | 80447679 | ID=cds.MS.gene93130.t1;Parent=MS.gene93130.t1 |
| chr1.1 | exon | 80446327 | 80446407 | 80446327 | ID=MS.gene93130.t1.exon8;Parent=MS.gene93130.t1 |
| chr1.1 | CDS | 80446327 | 80446407 | 80446327 | ID=cds.MS.gene93130.t1;Parent=MS.gene93130.t1 |
| chr1.1 | exon | 80445974 | 80446060 | 80445974 | ID=MS.gene93130.t1.exon9;Parent=MS.gene93130.t1 |
| chr1.1 | CDS | 80445974 | 80446060 | 80445974 | ID=cds.MS.gene93130.t1;Parent=MS.gene93130.t1 |
| chr1.1 | exon | 80445411 | 80445734 | 80445411 | ID=MS.gene93130.t1.exon10;Parent=MS.gene93130.t1 |
| chr1.1 | CDS | 80445411 | 80445734 | 80445411 | ID=cds.MS.gene93130.t1;Parent=MS.gene93130.t1 |
| Gene Sequence |
| Protein sequence |
