Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040883.t1 | XP_013466655.1 | 96.3 | 270 | 10 | 0 | 1 | 270 | 1 | 270 | 1.60E-145 | 525.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040883.t1 | Q42565 | 69.5 | 275 | 77 | 2 | 1 | 269 | 1 | 274 | 5.0e-108 | 392.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040883.t1 | B7FJB9 | 96.3 | 270 | 10 | 0 | 1 | 270 | 1 | 270 | 1.1e-145 | 525.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene040883 | MS.gene057327 | PPI |
| MS.gene50265 | MS.gene040883 | PPI |
| MS.gene040899 | MS.gene040883 | PPI |
| MS.gene029210 | MS.gene040883 | PPI |
| MS.gene82992 | MS.gene040883 | PPI |
| MS.gene008073 | MS.gene040883 | PPI |
| MS.gene99044 | MS.gene040883 | PPI |
| MS.gene93130 | MS.gene040883 | PPI |
| MS.gene026451 | MS.gene040883 | PPI |
| MS.gene69241 | MS.gene040883 | PPI |
| MS.gene061004 | MS.gene040883 | PPI |
| MS.gene031993 | MS.gene040883 | PPI |
| MS.gene037363 | MS.gene040883 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040883.t1 | MTR_1g033480 | 96.296 | 270 | 10 | 0 | 1 | 270 | 1 | 270 | 0.0 | 536 |
| MS.gene040883.t1 | MTR_1g095360 | 35.747 | 221 | 107 | 10 | 71 | 263 | 83 | 296 | 2.51e-26 | 108 |
| MS.gene040883.t1 | MTR_1g095360 | 31.641 | 256 | 105 | 11 | 71 | 263 | 83 | 331 | 9.89e-22 | 95.1 |
| MS.gene040883.t1 | MTR_4g103830 | 27.225 | 191 | 126 | 5 | 81 | 270 | 243 | 421 | 9.12e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040883.t1 | AT1G25220 | 69.455 | 275 | 77 | 2 | 1 | 269 | 1 | 274 | 1.84e-140 | 396 |
| MS.gene040883.t1 | AT1G25220 | 66.319 | 288 | 77 | 3 | 1 | 269 | 1 | 287 | 1.34e-136 | 387 |
| MS.gene040883.t1 | AT1G25155 | 79.358 | 218 | 45 | 0 | 52 | 269 | 3 | 220 | 3.18e-135 | 380 |
| MS.gene040883.t1 | AT1G25083 | 79.358 | 218 | 45 | 0 | 52 | 269 | 3 | 220 | 3.18e-135 | 380 |
| MS.gene040883.t1 | AT1G24909 | 79.358 | 218 | 45 | 0 | 52 | 269 | 3 | 220 | 3.18e-135 | 380 |
| MS.gene040883.t1 | AT5G57890 | 68.978 | 274 | 77 | 2 | 1 | 269 | 1 | 271 | 3.63e-135 | 382 |
| MS.gene040883.t1 | AT1G24807 | 74.892 | 231 | 45 | 1 | 52 | 269 | 3 | 233 | 3.09e-131 | 371 |
| MS.gene040883.t1 | AT2G28880 | 31.746 | 252 | 101 | 10 | 71 | 258 | 88 | 332 | 1.09e-22 | 97.8 |
| MS.gene040883.t1 | AT3G27740 | 27.660 | 188 | 123 | 5 | 82 | 268 | 182 | 357 | 6.48e-13 | 68.2 |
| MS.gene040883.t1 | AT3G27740 | 27.660 | 188 | 123 | 5 | 82 | 268 | 254 | 429 | 1.31e-12 | 67.8 |
Find 70 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCATTTGCAGTCCTTTCT+TGG | 0.192637 | 1.2:+18168752 | MS.gene040883:intron |
| TGTGAAGCTTATAGAGAAAA+AGG | 0.241377 | 1.2:+18170609 | MS.gene040883:CDS |
| CATATCTTTGCAAACAGTTT+TGG | 0.250297 | 1.2:+18167918 | MS.gene040883:CDS |
| AACAATTGGATCATTGGATT+TGG | 0.282127 | 1.2:-18166484 | None:intergenic |
| AAAATTATTCGTGCTCCTTC+TGG | 0.296696 | 1.2:+18168306 | MS.gene040883:CDS |
| AGAGAGATGGGTTTGGTTGA+AGG | 0.313567 | 1.2:-18166235 | None:intergenic |
| AATAACAACAATTGGATCAT+TGG | 0.340721 | 1.2:-18166490 | None:intergenic |
| CAGTGCATGGGAGAGGCTTT+CGG | 0.341782 | 1.2:+18167985 | MS.gene040883:CDS |
| CATTTGAATTTGTAGTATAT+GGG | 0.350967 | 1.2:+18167527 | MS.gene040883:intron |
| GGAGAAGATGGATTACTTGC+TGG | 0.373096 | 1.2:+18168372 | MS.gene040883:CDS |
| TGGACAATCGTCTTGCCGTC+AGG | 0.385639 | 1.2:-18170580 | None:intergenic |
| ACAGGAACACCTCAAGATTC+AGG | 0.404227 | 1.2:+18167895 | MS.gene040883:intron |
| CCACTGTTAGCTCGTCATTT+CGG | 0.408428 | 1.2:-18167577 | None:intergenic |
| GTTGTGCTAAAAGCTTCTTC+TGG | 0.417650 | 1.2:+18166417 | MS.gene040883:CDS |
| ATTTGCAGTCCTTTCTTGGC+TGG | 0.424817 | 1.2:+18168756 | MS.gene040883:intron |
| CTGCTCGTCACAAGAAATAT+CGG | 0.432561 | 1.2:+18168868 | MS.gene040883:CDS |
| CTGGTTTATTATGACGAGAA+AGG | 0.439998 | 1.2:+18168351 | MS.gene040883:CDS |
| GAGATGGGTTTGGTTGAAGG+AGG | 0.441404 | 1.2:-18166232 | None:intergenic |
| TATTGCAGATTTACGGTTTG+AGG | 0.444800 | 1.2:+18166377 | MS.gene040883:intron |
| CTTTACCTATAATCTTTGTC+AGG | 0.445958 | 1.2:+18166527 | MS.gene040883:CDS |
| TAGTTATCAATAACAACAAT+TGG | 0.455748 | 1.2:-18166498 | None:intergenic |
| TTTGAGGCCAAAAGGGGAAA+AGG | 0.455803 | 1.2:+18166393 | MS.gene040883:CDS |
| GCTCCTTCTGGTGTGATGCA+TGG | 0.460017 | 1.2:+18168318 | MS.gene040883:CDS |
| CTCCTTCTGGTGTGATGCAT+GGG | 0.464234 | 1.2:+18168319 | MS.gene040883:CDS |
| TTGAGGCCAAAAGGGGAAAA+GGG | 0.467181 | 1.2:+18166394 | MS.gene040883:CDS |
| ACCTGTGTTTGGTGTATGCA+TGG | 0.470981 | 1.2:+18167957 | MS.gene040883:CDS |
| AAAAGCTTCTTCTGGTGCAT+TGG | 0.475604 | 1.2:+18166425 | MS.gene040883:CDS |
| AGATGGGTTTGGTTGAAGGA+GGG | 0.475984 | 1.2:-18166231 | None:intergenic |
| GATGCATGGGAAAAGTTCTC+TGG | 0.479885 | 1.2:+18168332 | MS.gene040883:CDS |
| GGACCAACTATACCTGTGTT+TGG | 0.480161 | 1.2:+18167946 | MS.gene040883:CDS |
| TTTACGGTTTGAGGCCAAAA+GGG | 0.485215 | 1.2:+18166386 | MS.gene040883:CDS |
| TATGACGAGAAAGGAGAAGA+TGG | 0.486531 | 1.2:+18168360 | MS.gene040883:CDS |
| TCACAGCCTTGTAATTGAAA+AGG | 0.491056 | 1.2:+18168785 | MS.gene040883:CDS |
| ATTTACGGTTTGAGGCCAAA+AGG | 0.492849 | 1.2:+18166385 | MS.gene040883:CDS |
| GGAGTTAGGATTTCACTTTG+AGG | 0.494019 | 1.2:+18167550 | MS.gene040883:CDS |
| GACTGAAGATGGTCTCATAA+TGG | 0.496178 | 1.2:+18168845 | MS.gene040883:CDS |
| TGATATCTTCCAGCCAAGAA+AGG | 0.499322 | 1.2:-18168765 | None:intergenic |
| TCAGGGGTAATGATGCTCTC+TGG | 0.500396 | 1.2:-18170562 | None:intergenic |
| GTTACCTCAAGTTCATCGTC+AGG | 0.511613 | 1.2:-18168816 | None:intergenic |
| GGACAATCGTCTTGCCGTCA+GGG | 0.521598 | 1.2:-18170579 | None:intergenic |
| ACACCAAACACAGGTATAGT+TGG | 0.534068 | 1.2:-18167949 | None:intergenic |
| GGGATTGCAGTGCATGGGAG+AGG | 0.535605 | 1.2:+18167978 | MS.gene040883:CDS |
| AGAGGAGTGCTGATATCACC+TGG | 0.541959 | 1.2:+18167724 | MS.gene040883:CDS |
| ATTTGAATTTGTAGTATATG+GGG | 0.544304 | 1.2:+18167528 | MS.gene040883:intron |
| TTTGAATTTGTAGTATATGG+GGG | 0.544867 | 1.2:+18167529 | MS.gene040883:intron |
| CAAGAAATATCGGCATCTGC+AGG | 0.545153 | 1.2:+18168878 | MS.gene040883:CDS |
| AGGCAATCTTTACCTGGCCC+AGG | 0.547194 | 1.2:-18167742 | None:intergenic |
| TAACAGTGGAGGAGTTGAAA+AGG | 0.548164 | 1.2:+18167591 | MS.gene040883:CDS |
| GTAACAGCATGGACTGAAGA+TGG | 0.553308 | 1.2:+18168834 | MS.gene040883:CDS |
| CTATAAGCTTCACAAAGTTG+TGG | 0.558789 | 1.2:-18170600 | None:intergenic |
| AGGGTACTTGAGGGAAGTTG+AGG | 0.559040 | 1.2:-18166278 | None:intergenic |
| CTTTCCTGACGATGAACTTG+AGG | 0.568041 | 1.2:+18168812 | MS.gene040883:CDS |
| GTGCTGATATCACCTGGGCC+AGG | 0.568658 | 1.2:+18167730 | MS.gene040883:CDS |
| CCTGTGTTTGGTGTATGCAT+GGG | 0.570185 | 1.2:+18167958 | MS.gene040883:CDS |
| ATGCATGGGATTGCAGTGCA+TGG | 0.571943 | 1.2:+18167972 | MS.gene040883:CDS |
| TTCCCATGCATCACACCAGA+AGG | 0.583344 | 1.2:-18168321 | None:intergenic |
| TGAGGCCAAAAGGGGAAAAG+GGG | 0.595566 | 1.2:+18166395 | MS.gene040883:CDS |
| GGTGATATCAGCACTCCTCT+CGG | 0.597752 | 1.2:-18167721 | None:intergenic |
| GAGAGCATCATTACCCCTGA+CGG | 0.606613 | 1.2:+18170565 | MS.gene040883:CDS |
| TTACGGTTTGAGGCCAAAAG+GGG | 0.614380 | 1.2:+18166387 | MS.gene040883:CDS |
| GACAATCGTCTTGCCGTCAG+GGG | 0.621628 | 1.2:-18170578 | None:intergenic |
| TGCATGGGATTGCAGTGCAT+GGG | 0.639678 | 1.2:+18167973 | MS.gene040883:CDS |
| TGCATGGGAGAGGCTTTCGG+CGG | 0.645049 | 1.2:+18167988 | MS.gene040883:CDS |
| CCGAAATGACGAGCTAACAG+TGG | 0.674805 | 1.2:+18167577 | MS.gene040883:CDS |
| CCCATGCATACACCAAACAC+AGG | 0.681189 | 1.2:-18167958 | None:intergenic |
| AAATGACGAGCTAACAGTGG+AGG | 0.681547 | 1.2:+18167580 | MS.gene040883:CDS |
| AAAGATATGCCTGAATCTTG+AGG | 0.685103 | 1.2:-18167904 | None:intergenic |
| GGAGATTCGAGAGATGAATG+TGG | 0.685267 | 1.2:-18166210 | None:intergenic |
| ATGAACTTGAGGTAACAGCA+TGG | 0.702525 | 1.2:+18168823 | MS.gene040883:CDS |
| GAGGAGTGCTGATATCACCT+GGG | 0.710470 | 1.2:+18167725 | MS.gene040883:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAAATTATTATTTTTTTGA+TGG | + | chr1.2:18166728-18166747 | MS.gene040883:intron | 10.0% |
| !!! | TTATTATTATTTTGTCTATT+AGG | - | chr1.2:18169494-18169513 | None:intergenic | 10.0% |
| !!! | TTTTTCTTTCATTTAATTAA+TGG | + | chr1.2:18166598-18166617 | MS.gene040883:intron | 10.0% |
| !! | AAATGAACATTATTCATAAA+AGG | - | chr1.2:18166317-18166336 | None:intergenic | 15.0% |
| !! | AATGAACATTATTCATAAAA+GGG | - | chr1.2:18166316-18166335 | None:intergenic | 15.0% |
| !! | ATAAAAATTAAAACCTACTT+TGG | - | chr1.2:18168402-18168421 | None:intergenic | 15.0% |
| !! | TTTCATTTAATTAATGGTTA+AGG | + | chr1.2:18166604-18166623 | MS.gene040883:intron | 15.0% |
| !! | TTTCTAAATTTAATGTGAAA+GGG | + | chr1.2:18167281-18167300 | MS.gene040883:intron | 15.0% |
| !!! | TACTTTTGTATGAAATTTTT+GGG | + | chr1.2:18168422-18168441 | MS.gene040883:intron | 15.0% |
| !!! | TTACTTTTGTATGAAATTTT+TGG | + | chr1.2:18168421-18168440 | MS.gene040883:intron | 15.0% |
| !!! | TTTTCTAAATTTAATGTGAA+AGG | + | chr1.2:18167280-18167299 | MS.gene040883:intron | 15.0% |
| !! | AAAAAAATAAACGTGAAACT+GGG | + | chr1.2:18169600-18169619 | MS.gene040883:intron | 20.0% |
| !! | AAAAAGGTTTCAAAAGAAAT+TGG | - | chr1.2:18167320-18167339 | None:intergenic | 20.0% |
| !! | AAAAGGTTTCAAAAGAAATT+GGG | - | chr1.2:18167319-18167338 | None:intergenic | 20.0% |
| !! | ACATTTGAATTTGTAGTATA+TGG | + | chr1.2:18167526-18167545 | MS.gene040883:intron | 20.0% |
| !! | ATATATGAGTACATAATGTT+TGG | + | chr1.2:18166675-18166694 | MS.gene040883:intron | 20.0% |
| !! | ATTTATATTGAGGTAAAATG+CGG | + | chr1.2:18168553-18168572 | MS.gene040883:intron | 20.0% |
| !! | ATTTGAATTTGTAGTATATG+GGG | + | chr1.2:18167528-18167547 | MS.gene040883:intron | 20.0% |
| !! | CATTTGAATTTGTAGTATAT+GGG | + | chr1.2:18167527-18167546 | MS.gene040883:intron | 20.0% |
| !! | GAAATTTATAGAACAAATGA+AGG | + | chr1.2:18169693-18169712 | MS.gene040883:intron | 20.0% |
| !! | GTATATGAAATTTGATGTAA+AGG | + | chr1.2:18166345-18166364 | MS.gene040883:intron | 20.0% |
| !! | TAAAAACAGTTTCATCAATA+AGG | - | chr1.2:18167627-18167646 | None:intergenic | 20.0% |
| !! | TAACAATTTCAAATGACATT+TGG | + | chr1.2:18170223-18170242 | MS.gene040883:intron | 20.0% |
| !! | TAGTTATCAATAACAACAAT+TGG | - | chr1.2:18166501-18166520 | None:intergenic | 20.0% |
| !! | TCTTAACATGCATTTATAAT+AGG | + | chr1.2:18168985-18169004 | MS.gene040883:intron | 20.0% |
| !! | TTTATTGAATCATTAGGTTA+GGG | - | chr1.2:18169816-18169835 | None:intergenic | 20.0% |
| !!! | AAAAGGGTATATGAATAAAA+GGG | - | chr1.2:18166300-18166319 | None:intergenic | 20.0% |
| !!! | AAACTATATGACATTTTGTA+TGG | - | chr1.2:18168479-18168498 | None:intergenic | 20.0% |
| !!! | ATACCATTAATTTCGTTTTT+TGG | - | chr1.2:18169852-18169871 | None:intergenic | 20.0% |
| !!! | ATCTGTTCTTTTTACAAAAT+CGG | + | chr1.2:18167481-18167500 | MS.gene040883:intron | 20.0% |
| !!! | ATCTTAGTATTCAATGATTT+TGG | + | chr1.2:18169347-18169366 | MS.gene040883:intron | 20.0% |
| !!! | ATGCAAAATTCAATGTTTTT+AGG | - | chr1.2:18167034-18167053 | None:intergenic | 20.0% |
| !!! | ATGTTTTTAAATTGCATTTG+TGG | + | chr1.2:18168510-18168529 | MS.gene040883:intron | 20.0% |
| !!! | GAATTTTTATTGCAGATTTA+CGG | + | chr1.2:18166370-18166389 | MS.gene040883:intron | 20.0% |
| !!! | GGTTAAAGTGTTTTAAATTA+TGG | + | chr1.2:18166856-18166875 | MS.gene040883:intron | 20.0% |
| !!! | TAAAAGGGTATATGAATAAA+AGG | - | chr1.2:18166301-18166320 | None:intergenic | 20.0% |
| !!! | TACCATTAATTTCGTTTTTT+GGG | - | chr1.2:18169851-18169870 | None:intergenic | 20.0% |
| !!! | TATTATTTTGTCTATTAGGT+GGG | - | chr1.2:18169490-18169509 | None:intergenic | 20.0% |
| !!! | TATTTTTTTGATGGTGAAAT+TGG | + | chr1.2:18166737-18166756 | MS.gene040883:intron | 20.0% |
| !!! | TGATGTTTTATTGAATCATT+AGG | - | chr1.2:18169822-18169841 | None:intergenic | 20.0% |
| !!! | TGCAAAATTCAATGTTTTTA+GGG | - | chr1.2:18167033-18167052 | None:intergenic | 20.0% |
| !!! | TTATTATTTTGTCTATTAGG+TGG | - | chr1.2:18169491-18169510 | None:intergenic | 20.0% |
| !!! | TTATTGATGAAACTGTTTTT+AGG | + | chr1.2:18167626-18167645 | MS.gene040883:intron | 20.0% |
| !!! | TTTTATTGAATCATTAGGTT+AGG | - | chr1.2:18169817-18169836 | None:intergenic | 20.0% |
| ! | AAAAACCTGACAAAGATTAT+AGG | - | chr1.2:18166535-18166554 | None:intergenic | 25.0% |
| ! | AACAATGTGAAAGATAAGAT+AGG | - | chr1.2:18169307-18169326 | None:intergenic | 25.0% |
| ! | AACGGTAAAAGTTAAAATGT+AGG | - | chr1.2:18168203-18168222 | None:intergenic | 25.0% |
| ! | AAGGAAAATGTGGAAAAATT+TGG | + | chr1.2:18167227-18167246 | MS.gene040883:intron | 25.0% |
| ! | AAGTTATGATTGTTAACGTT+GGG | + | chr1.2:18166887-18166906 | MS.gene040883:intron | 25.0% |
| ! | AATAACAACAATTGGATCAT+TGG | - | chr1.2:18166493-18166512 | None:intergenic | 25.0% |
| ! | AATTCAAAATCAACGTTTCA+GGG | - | chr1.2:18167109-18167128 | None:intergenic | 25.0% |
| ! | AATTTAACACTGGATTAACA+TGG | + | chr1.2:18167202-18167221 | MS.gene040883:intron | 25.0% |
| ! | ATTACATGTTCAAGAAGAAA+AGG | - | chr1.2:18170467-18170486 | None:intergenic | 25.0% |
| ! | CAAATTATATCAGAGATAAG+AGG | - | chr1.2:18168717-18168736 | None:intergenic | 25.0% |
| ! | CTCTTATCTCTGATATAATT+TGG | + | chr1.2:18168715-18168734 | MS.gene040883:intron | 25.0% |
| ! | GAAAAAAATAAACGTGAAAC+TGG | + | chr1.2:18169599-18169618 | MS.gene040883:intron | 25.0% |
| ! | GAATTGATGAAGACATATTT+GGG | + | chr1.2:18169571-18169590 | MS.gene040883:intron | 25.0% |
| ! | GGTAAAATGCATTTATATTG+AGG | + | chr1.2:18168543-18168562 | MS.gene040883:intron | 25.0% |
| ! | TAAAAGCTTCTTATTACATC+AGG | - | chr1.2:18167674-18167693 | None:intergenic | 25.0% |
| ! | TAAGTTATGATTGTTAACGT+TGG | + | chr1.2:18166886-18166905 | MS.gene040883:intron | 25.0% |
| ! | TAATAAAGTCGAATACAACA+GGG | - | chr1.2:18169108-18169127 | None:intergenic | 25.0% |
| ! | TAATTCAAAATCAACGTTTC+AGG | - | chr1.2:18167110-18167129 | None:intergenic | 25.0% |
| ! | TTACTATTTCAGAGAAAAAG+AGG | + | chr1.2:18169756-18169775 | MS.gene040883:intron | 25.0% |
| ! | TTGCTCATCAAAACAAAAAA+AGG | - | chr1.2:18169641-18169660 | None:intergenic | 25.0% |
| ! | TTTGAATTTGTAGTATATGG+GGG | + | chr1.2:18167529-18167548 | MS.gene040883:intron | 25.0% |
| !! | AAGAGGCATATAAAAATGAA+CGG | - | chr1.2:18168700-18168719 | None:intergenic | 25.0% |
| !! | AGAATCTTTTATTGTACTTG+TGG | + | chr1.2:18167455-18167474 | MS.gene040883:intron | 25.0% |
| !! | ATAATCGAAAATTCTGAAGA+AGG | - | chr1.2:18167765-18167784 | None:intergenic | 25.0% |
| !! | ATTTATTTCTTTGCAACTAC+AGG | + | chr1.2:18170525-18170544 | MS.gene040883:intron | 25.0% |
| !! | ATTTCTGGAAACAATGAAAA+CGG | + | chr1.2:18170306-18170325 | MS.gene040883:intron | 25.0% |
| !! | TTGTTGTGTGATTATTTTCT+TGG | + | chr1.2:18166565-18166584 | MS.gene040883:intron | 25.0% |
| !! | TTTATTTCTTTGCAACTACA+GGG | + | chr1.2:18170526-18170545 | MS.gene040883:intron | 25.0% |
| !!! | AGTGTTTTAAATTATGGTTG+AGG | + | chr1.2:18166862-18166881 | MS.gene040883:intron | 25.0% |
| !!! | ATGATTTTGGTTTAAAGAGT+TGG | + | chr1.2:18169360-18169379 | MS.gene040883:intron | 25.0% |
| !!! | TTGATTTTCCTTTTTAACTG+TGG | + | chr1.2:18170249-18170268 | MS.gene040883:intron | 25.0% |
| AACAATTGGATCATTGGATT+TGG | - | chr1.2:18166487-18166506 | None:intergenic | 30.0% | |
| AAGAAAAAACTGTAACGAAC+AGG | + | chr1.2:18168093-18168112 | MS.gene040883:intron | 30.0% | |
| AAGAAAAAATGACACAACAG+TGG | - | chr1.2:18167147-18167166 | None:intergenic | 30.0% | |
| AAGTCTTGATCCTATTGTAA+TGG | - | chr1.2:18168264-18168283 | None:intergenic | 30.0% | |
| AATCATTAGGTTAGGGAATT+GGG | - | chr1.2:18169809-18169828 | None:intergenic | 30.0% | |
| AGTTATGATTGTTAACGTTG+GGG | + | chr1.2:18166888-18166907 | MS.gene040883:intron | 30.0% | |
| ATAATGCAGGTGGAATAAAA+TGG | - | chr1.2:18169141-18169160 | None:intergenic | 30.0% | |
| ATTCAAAATCAACGTTTCAG+GGG | - | chr1.2:18167108-18167127 | None:intergenic | 30.0% | |
| ATTGCACTTCACTTTAAACA+AGG | - | chr1.2:18167409-18167428 | None:intergenic | 30.0% | |
| CTCCCAAAAAACGAAATTAA+TGG | + | chr1.2:18169846-18169865 | MS.gene040883:intron | 30.0% | |
| CTTTACCTATAATCTTTGTC+AGG | + | chr1.2:18166527-18166546 | MS.gene040883:CDS | 30.0% | |
| GGAATTGATGAAGACATATT+TGG | + | chr1.2:18169570-18169589 | MS.gene040883:intron | 30.0% | |
| GTAATAAAGTCGAATACAAC+AGG | - | chr1.2:18169109-18169128 | None:intergenic | 30.0% | |
| TCTCTTTACCACAGTTAAAA+AGG | - | chr1.2:18170260-18170279 | None:intergenic | 30.0% | |
| TGCAATTAAGAATAGAGCTA+AGG | + | chr1.2:18167423-18167442 | MS.gene040883:intron | 30.0% | |
| TGTACTTATCTGTCATGATA+GGG | + | chr1.2:18168920-18168939 | MS.gene040883:intron | 30.0% | |
| TGTGAAGCTTATAGAGAAAA+AGG | + | chr1.2:18170609-18170628 | MS.gene040883:CDS | 30.0% | |
| TGTTTGCATAACTCCTTTAT+TGG | + | chr1.2:18169196-18169215 | MS.gene040883:intron | 30.0% | |
| TTGAATTAGAAAAAGCTGTG+TGG | + | chr1.2:18166835-18166854 | MS.gene040883:intron | 30.0% | |
| TTGTACTTATCTGTCATGAT+AGG | + | chr1.2:18168919-18168938 | MS.gene040883:intron | 30.0% | |
| TTTAAAGAGTTGGAATCCTA+GGG | + | chr1.2:18169370-18169389 | MS.gene040883:intron | 30.0% | |
| TTTAACAGAAAAAATCCGAG+AGG | + | chr1.2:18167706-18167725 | MS.gene040883:intron | 30.0% | |
| ! | ATGAAGACATATTTGGGTTA+GGG | + | chr1.2:18169577-18169596 | MS.gene040883:intron | 30.0% |
| ! | CATATCTTTGCAAACAGTTT+TGG | + | chr1.2:18167918-18167937 | MS.gene040883:CDS | 30.0% |
| ! | CTGCAATTTAGAACTATAAC+TGG | + | chr1.2:18168653-18168672 | MS.gene040883:intron | 30.0% |
| ! | TAGTTCTTTTATCTCGTACA+GGG | + | chr1.2:18168283-18168302 | MS.gene040883:intron | 30.0% |
| ! | TGTGTCATTCATCATTAACT+CGG | + | chr1.2:18168152-18168171 | MS.gene040883:intron | 30.0% |
| !! | ATGAATAAAAGGGTACTTGA+GGG | - | chr1.2:18166290-18166309 | None:intergenic | 30.0% |
| !! | TATGAATAAAAGGGTACTTG+AGG | - | chr1.2:18166291-18166310 | None:intergenic | 30.0% |
| !! | TTAGTTCTTTTATCTCGTAC+AGG | + | chr1.2:18168282-18168301 | MS.gene040883:intron | 30.0% |
| !!! | CTTTTGAAACCTTTTTCTCT+TGG | + | chr1.2:18167324-18167343 | MS.gene040883:intron | 30.0% |
| !!! | TTTTTGATGGTGAAATTGGT+TGG | + | chr1.2:18166741-18166760 | MS.gene040883:intron | 30.0% |
| AAAAAATGACACAACAGTGG+CGG | - | chr1.2:18167144-18167163 | None:intergenic | 35.0% | |
| AAAATTATTCGTGCTCCTTC+TGG | + | chr1.2:18168306-18168325 | MS.gene040883:CDS | 35.0% | |
| AAAGATATGCCTGAATCTTG+AGG | - | chr1.2:18167907-18167926 | None:intergenic | 35.0% | |
| AGAACAAATGAAGGATGAGA+GGG | + | chr1.2:18169702-18169721 | MS.gene040883:intron | 35.0% | |
| AGAATATGTTCTCAAAAGCG+CGG | - | chr1.2:18169164-18169183 | None:intergenic | 35.0% | |
| ATATGAGAACTGAGAGAGAA+TGG | + | chr1.2:18169667-18169686 | MS.gene040883:intron | 35.0% | |
| ATGTTGCCATTGAGATGAAA+CGG | - | chr1.2:18168221-18168240 | None:intergenic | 35.0% | |
| CAGTCTAATCCAAGAGAAAA+AGG | - | chr1.2:18167336-18167355 | None:intergenic | 35.0% | |
| CTATAAGCTTCACAAAGTTG+TGG | - | chr1.2:18170603-18170622 | None:intergenic | 35.0% | |
| CTGACCTTATCAAGTGAAAA+CGG | + | chr1.2:18169875-18169894 | MS.gene040883:intron | 35.0% | |
| CTGGTTTATTATGACGAGAA+AGG | + | chr1.2:18168351-18168370 | MS.gene040883:CDS | 35.0% | |
| GAATCATTAGGTTAGGGAAT+TGG | - | chr1.2:18169810-18169829 | None:intergenic | 35.0% | |
| GAGTCTTAATTGTAATCCCA+GGG | + | chr1.2:18168012-18168031 | MS.gene040883:intron | 35.0% | |
| GATGTGAAAAAGAGAGAGAT+GGG | - | chr1.2:18166250-18166269 | None:intergenic | 35.0% | |
| GGGAAGAGATAATTTAACAC+TGG | + | chr1.2:18167192-18167211 | MS.gene040883:intron | 35.0% | |
| GTTATGATTGTTAACGTTGG+GGG | + | chr1.2:18166889-18166908 | MS.gene040883:intron | 35.0% | |
| GTTTAAAGAGTTGGAATCCT+AGG | + | chr1.2:18169369-18169388 | MS.gene040883:intron | 35.0% | |
| TAACATGGCAAAGGAAAATG+TGG | + | chr1.2:18167217-18167236 | MS.gene040883:intron | 35.0% | |
| TAACATTGTTTGCTCCTTAC+AGG | + | chr1.2:18167877-18167896 | MS.gene040883:intron | 35.0% | |
| TAACTGTGGTAAAGAGAAGA+TGG | + | chr1.2:18170263-18170282 | MS.gene040883:intron | 35.0% | |
| TACCTACAGTAGACCAAAAT+CGG | - | chr1.2:18168964-18168983 | None:intergenic | 35.0% | |
| TAGAACAAATGAAGGATGAG+AGG | + | chr1.2:18169701-18169720 | MS.gene040883:intron | 35.0% | |
| TAGTTCATCGATCGTGTTTA+AGG | - | chr1.2:18167821-18167840 | None:intergenic | 35.0% | |
| TATCATTTGCAGTCCTTTCT+TGG | + | chr1.2:18168752-18168771 | MS.gene040883:intron | 35.0% | |
| TATGAGAACTGAGAGAGAAT+GGG | + | chr1.2:18169668-18169687 | MS.gene040883:intron | 35.0% | |
| TATTGCAGATTTACGGTTTG+AGG | + | chr1.2:18166377-18166396 | MS.gene040883:intron | 35.0% | |
| TCATGACAGATAAGTACAAC+AGG | - | chr1.2:18168918-18168937 | None:intergenic | 35.0% | |
| TCTTCATCAATTCCTGTTGT+TGG | - | chr1.2:18169564-18169583 | None:intergenic | 35.0% | |
| TGAAAGATAAGATAGGTGAC+AGG | - | chr1.2:18169300-18169319 | None:intergenic | 35.0% | |
| TGACCTTATCAAGTGAAAAC+GGG | + | chr1.2:18169876-18169895 | MS.gene040883:intron | 35.0% | |
| TGAGTCTTAATTGTAATCCC+AGG | + | chr1.2:18168011-18168030 | MS.gene040883:intron | 35.0% | |
| TGATGTGAAAAAGAGAGAGA+TGG | - | chr1.2:18166251-18166270 | None:intergenic | 35.0% | |
| TTATGATTGTTAACGTTGGG+GGG | + | chr1.2:18166890-18166909 | MS.gene040883:intron | 35.0% | |
| TTGTAAACCGACATCAAAGT+AGG | - | chr1.2:18170377-18170396 | None:intergenic | 35.0% | |
| TTTGATGCTCCTATGGTAAA+GGG | + | chr1.2:18167171-18167190 | MS.gene040883:intron | 35.0% | |
| ! | AGCTCTCCTTTTCAATTACA+AGG | - | chr1.2:18168794-18168813 | None:intergenic | 35.0% |
| ! | CTTTTACCGTTTCATCTCAA+TGG | + | chr1.2:18168212-18168231 | MS.gene040883:intron | 35.0% |
| ! | GATGAAGACATATTTGGGTT+AGG | + | chr1.2:18169576-18169595 | MS.gene040883:intron | 35.0% |
| ! | TCACAGCCTTGTAATTGAAA+AGG | + | chr1.2:18168785-18168804 | MS.gene040883:CDS | 35.0% |
| ! | TTTTGATGCTCCTATGGTAA+AGG | + | chr1.2:18167170-18167189 | MS.gene040883:intron | 35.0% |
| !! | CACTTTTAGAAGTTTTCCCT+GGG | - | chr1.2:18168031-18168050 | None:intergenic | 35.0% |
| !! | TCACTTTTAGAAGTTTTCCC+TGG | - | chr1.2:18168032-18168051 | None:intergenic | 35.0% |
| !!! | TTGCAAACAGTTTTGGAACT+TGG | + | chr1.2:18167925-18167944 | MS.gene040883:CDS | 35.0% |
| !!! | TTGCTTTTTTCCAACAGATG+AGG | + | chr1.2:18169533-18169552 | MS.gene040883:intron | 35.0% |
| AAAAGCTTCTTCTGGTGCAT+TGG | + | chr1.2:18166425-18166444 | MS.gene040883:CDS | 40.0% | |
| AAATGAAGGATGAGAGGGAA+TGG | + | chr1.2:18169707-18169726 | MS.gene040883:intron | 40.0% | |
| AACTAGGGAGAATGCATTTC+TGG | + | chr1.2:18170291-18170310 | MS.gene040883:intron | 40.0% | |
| AATGTAAACAGTCCAGACCA+TGG | - | chr1.2:18170163-18170182 | None:intergenic | 40.0% | |
| ACACCAAACACAGGTATAGT+TGG | - | chr1.2:18167952-18167971 | None:intergenic | 40.0% | |
| ACACTGGATTAACATGGCAA+AGG | + | chr1.2:18167208-18167227 | MS.gene040883:intron | 40.0% | |
| AGAGAAGATGGAAGGTAACT+AGG | + | chr1.2:18170275-18170294 | MS.gene040883:intron | 40.0% | |
| ATCGCAAAATCGTACGATCT+TGG | + | chr1.2:18170114-18170133 | MS.gene040883:intron | 40.0% | |
| ATGAACTTGAGGTAACAGCA+TGG | + | chr1.2:18168823-18168842 | MS.gene040883:CDS | 40.0% | |
| ATGTTACACCACAAACCCAT+CGG | - | chr1.2:18166999-18167018 | None:intergenic | 40.0% | |
| CCAAAATCGTTGAATGTGTG+GGG | + | chr1.2:18166962-18166981 | MS.gene040883:intron | 40.0% | |
| CCCAAAATCGTTGAATGTGT+GGG | + | chr1.2:18166961-18166980 | MS.gene040883:intron | 40.0% | |
| CGACATCAAAGTAGGCATTA+CGG | - | chr1.2:18170369-18170388 | None:intergenic | 40.0% | |
| CGTAATGCCTACTTTGATGT+CGG | + | chr1.2:18170367-18170386 | MS.gene040883:intron | 40.0% | |
| CTGCTCGTCACAAGAAATAT+CGG | + | chr1.2:18168868-18168887 | MS.gene040883:CDS | 40.0% | |
| GACTGAAGATGGTCTCATAA+TGG | + | chr1.2:18168845-18168864 | MS.gene040883:CDS | 40.0% | |
| GAGAAGATGGAAGGTAACTA+GGG | + | chr1.2:18170276-18170295 | MS.gene040883:intron | 40.0% | |
| GATCCTACTAAAGATCGTTG+GGG | + | chr1.2:18169418-18169437 | MS.gene040883:intron | 40.0% | |
| GGAGTTAGGATTTCACTTTG+AGG | + | chr1.2:18167550-18167569 | MS.gene040883:CDS | 40.0% | |
| GGATCCTACTAAAGATCGTT+GGG | + | chr1.2:18169417-18169436 | MS.gene040883:intron | 40.0% | |
| GTATAGTGGTGTAGCTTCTA+TGG | - | chr1.2:18169086-18169105 | None:intergenic | 40.0% | |
| GTTGTGCTAAAAGCTTCTTC+TGG | + | chr1.2:18166417-18166436 | MS.gene040883:CDS | 40.0% | |
| TAACAGTGGAGGAGTTGAAA+AGG | + | chr1.2:18167591-18167610 | MS.gene040883:CDS | 40.0% | |
| TAGATCGTAGGATCGTAACA+AGG | + | chr1.2:18169454-18169473 | MS.gene040883:intron | 40.0% | |
| TATCTCTTCCCCTTTACCAT+AGG | - | chr1.2:18167183-18167202 | None:intergenic | 40.0% | |
| TATGACGAGAAAGGAGAAGA+TGG | + | chr1.2:18168360-18168379 | MS.gene040883:CDS | 40.0% | |
| TCATGATAGGGTCCAAGAAA+GGG | + | chr1.2:18168932-18168951 | MS.gene040883:intron | 40.0% | |
| TCGAATACAACAGGGTATAG+TGG | - | chr1.2:18169100-18169119 | None:intergenic | 40.0% | |
| TCGCAAAATCGTACGATCTT+GGG | + | chr1.2:18170115-18170134 | MS.gene040883:intron | 40.0% | |
| TGAAGAAGGCAATCTTTACC+TGG | - | chr1.2:18167751-18167770 | None:intergenic | 40.0% | |
| TGATATCTTCCAGCCAAGAA+AGG | - | chr1.2:18168768-18168787 | None:intergenic | 40.0% | |
| TGCATAACTCCTTTATTGGC+TGG | + | chr1.2:18169200-18169219 | MS.gene040883:intron | 40.0% | |
| TGGACCATGGTTGTCAAAAT+CGG | + | chr1.2:18169395-18169414 | MS.gene040883:intron | 40.0% | |
| TGTGGTAAAGAGAAGATGGA+AGG | + | chr1.2:18170267-18170286 | MS.gene040883:intron | 40.0% | |
| TTGATGCTCCTATGGTAAAG+GGG | + | chr1.2:18167172-18167191 | MS.gene040883:intron | 40.0% | |
| TTGTAGTATATGGGGGAGTT+AGG | + | chr1.2:18167536-18167555 | MS.gene040883:intron | 40.0% | |
| ! | AATCTTGAGGTGTTCCTGTA+AGG | - | chr1.2:18167894-18167913 | None:intergenic | 40.0% |
| ! | ATAGAAAGAGCGTAGATCGT+AGG | + | chr1.2:18169442-18169461 | MS.gene040883:intron | 40.0% |
| ! | ATTTACGGTTTGAGGCCAAA+AGG | + | chr1.2:18166385-18166404 | MS.gene040883:CDS | 40.0% |
| ! | CCACACATTCAACGATTTTG+GGG | - | chr1.2:18166963-18166982 | None:intergenic | 40.0% |
| ! | CCCACACATTCAACGATTTT+GGG | - | chr1.2:18166964-18166983 | None:intergenic | 40.0% |
| ! | GAAAAAGAGAGAGATGGGTT+TGG | - | chr1.2:18166245-18166264 | None:intergenic | 40.0% |
| ! | GAAGTGTCAGTGTTACATGA+AGG | - | chr1.2:18169034-18169053 | None:intergenic | 40.0% |
| ! | GTTAGAAGCCTTGTCACATT+AGG | - | chr1.2:18167856-18167875 | None:intergenic | 40.0% |
| ! | TTCTGCAATTGATTTCGACC+CGG | - | chr1.2:18169985-18170004 | None:intergenic | 40.0% |
| ! | TTTACGGTTTGAGGCCAAAA+GGG | + | chr1.2:18166386-18166405 | MS.gene040883:CDS | 40.0% |
| !! | ATCCGATTTTGGTCTACTGT+AGG | + | chr1.2:18168959-18168978 | MS.gene040883:intron | 40.0% |
| !! | CTTCACTTTTGATGCTCCTA+TGG | + | chr1.2:18167164-18167183 | MS.gene040883:intron | 40.0% |
| !! | GATTTCTGAGATATCCGCAA+TGG | - | chr1.2:18168602-18168621 | None:intergenic | 40.0% |
| !!! | AACTCGGCTCTCTTTTTCAA+TGG | + | chr1.2:18168168-18168187 | MS.gene040883:intron | 40.0% |
| AAAGCGGAAGATCGCAGAAT+CGG | - | chr1.2:18170022-18170041 | None:intergenic | 45.0% | |
| AAATGACGAGCTAACAGTGG+AGG | + | chr1.2:18167580-18167599 | MS.gene040883:CDS | 45.0% | |
| AACCCTGTCACGACACAATT+GGG | - | chr1.2:18167074-18167093 | None:intergenic | 45.0% | |
| ACAGGAACACCTCAAGATTC+AGG | + | chr1.2:18167895-18167914 | MS.gene040883:intron | 45.0% | |
| ATGCCCCAACGATCTTTAGT+AGG | - | chr1.2:18169424-18169443 | None:intergenic | 45.0% | |
| ATTTGCAGTCCTTTCTTGGC+TGG | + | chr1.2:18168756-18168775 | MS.gene040883:intron | 45.0% | |
| CAAGAAATATCGGCATCTGC+AGG | + | chr1.2:18168878-18168897 | MS.gene040883:CDS | 45.0% | |
| CCACTGTTAGCTCGTCATTT+CGG | - | chr1.2:18167580-18167599 | None:intergenic | 45.0% | |
| CCCCAAAATCGTTGAATGTG+TGG | + | chr1.2:18166960-18166979 | MS.gene040883:intron | 45.0% | |
| CGTTTCCTCCTAATGTGACA+AGG | + | chr1.2:18167845-18167864 | MS.gene040883:intron | 45.0% | |
| CTATATTGCAGCCGCAATTG+CGG | + | chr1.2:18168623-18168642 | MS.gene040883:intron | 45.0% | |
| CTATTGTAATGGCTCAGCCA+GGG | - | chr1.2:18168253-18168272 | None:intergenic | 45.0% | |
| CTTTCCTGACGATGAACTTG+AGG | + | chr1.2:18168812-18168831 | MS.gene040883:CDS | 45.0% | |
| GATGCATGGGAAAAGTTCTC+TGG | + | chr1.2:18168332-18168351 | MS.gene040883:CDS | 45.0% | |
| GCAATTGCGGCTGCAATATA+GGG | - | chr1.2:18168624-18168643 | None:intergenic | 45.0% | |
| GGACCAACTATACCTGTGTT+TGG | + | chr1.2:18167946-18167965 | MS.gene040883:CDS | 45.0% | |
| GGACCATGGTTGTCAAAATC+GGG | + | chr1.2:18169396-18169415 | MS.gene040883:intron | 45.0% | |
| GGAGATTCGAGAGATGAATG+TGG | - | chr1.2:18166213-18166232 | None:intergenic | 45.0% | |
| GGGATCCTACTAAAGATCGT+TGG | + | chr1.2:18169416-18169435 | MS.gene040883:intron | 45.0% | |
| GGGTCGAAATTGAACCGAAA+CGG | + | chr1.2:18169896-18169915 | MS.gene040883:intron | 45.0% | |
| GGTCGAAATTGAACCGAAAC+GGG | + | chr1.2:18169897-18169916 | MS.gene040883:intron | 45.0% | |
| GTCATGATAGGGTCCAAGAA+AGG | + | chr1.2:18168931-18168950 | MS.gene040883:intron | 45.0% | |
| GTTACCTCAAGTTCATCGTC+AGG | - | chr1.2:18168819-18168838 | None:intergenic | 45.0% | |
| TATTGTAATGGCTCAGCCAG+GGG | - | chr1.2:18168252-18168271 | None:intergenic | 45.0% | |
| TGTTACACCACAAACCCATC+GGG | - | chr1.2:18166998-18167017 | None:intergenic | 45.0% | |
| TTGAGGCCAAAAGGGGAAAA+GGG | + | chr1.2:18166394-18166413 | MS.gene040883:CDS | 45.0% | |
| ! | ACTTGCTGGACTACCAAAGT+AGG | + | chr1.2:18168386-18168405 | MS.gene040883:intron | 45.0% |
| ! | AGAAGCCTTGTCACATTAGG+AGG | - | chr1.2:18167853-18167872 | None:intergenic | 45.0% |
| ! | AGAGAGATGGGTTTGGTTGA+AGG | - | chr1.2:18166238-18166257 | None:intergenic | 45.0% |
| ! | AGATGGGTTTGGTTGAAGGA+GGG | - | chr1.2:18166234-18166253 | None:intergenic | 45.0% |
| ! | CCCCACACATTCAACGATTT+TGG | - | chr1.2:18166965-18166984 | None:intergenic | 45.0% |
| ! | CGACCCGTTTTCACTTGATA+AGG | - | chr1.2:18169882-18169901 | None:intergenic | 45.0% |
| ! | GATGGGTTTGTGGTGTAACA+TGG | + | chr1.2:18166998-18167017 | MS.gene040883:intron | 45.0% |
| ! | GTAACAGCATGGACTGAAGA+TGG | + | chr1.2:18168834-18168853 | MS.gene040883:CDS | 45.0% |
| ! | GTACGATTTTGCGATTCCGA+CGG | - | chr1.2:18170109-18170128 | None:intergenic | 45.0% |
| ! | TTACGGTTTGAGGCCAAAAG+GGG | + | chr1.2:18166387-18166406 | MS.gene040883:CDS | 45.0% |
| ! | TTTGAGGCCAAAAGGGGAAA+AGG | + | chr1.2:18166393-18166412 | MS.gene040883:CDS | 45.0% |
| !! | ACCTGTGTTTGGTGTATGCA+TGG | + | chr1.2:18167957-18167976 | MS.gene040883:CDS | 45.0% |
| !! | CCTGTGTTTGGTGTATGCAT+GGG | + | chr1.2:18167958-18167977 | MS.gene040883:CDS | 45.0% |
| !! | CGATTTTGACAACCATGGTC+TGG | + | chr1.2:18170148-18170167 | MS.gene040883:intron | 45.0% |
| !! | GATCCCGATTTTGACAACCA+TGG | - | chr1.2:18169402-18169421 | None:intergenic | 45.0% |
| !! | GATCGCGATTTTGACAACCA+TGG | + | chr1.2:18170143-18170162 | MS.gene040883:intron | 45.0% |
| !! | GGAGAAGATGGATTACTTGC+TGG | + | chr1.2:18168372-18168391 | MS.gene040883:CDS | 45.0% |
| AATCGGATCCGACCCTTTCT+TGG | - | chr1.2:18168947-18168966 | None:intergenic | 50.0% | |
| ACTGCCAACTTGAACTGCTG+TGG | - | chr1.2:18170417-18170436 | None:intergenic | 50.0% | |
| AGAGTTGGAATCCTAGGGTC+TGG | + | chr1.2:18169375-18169394 | MS.gene040883:intron | 50.0% | |
| AGCATGGAATCGACCCGTTT+CGG | - | chr1.2:18169913-18169932 | None:intergenic | 50.0% | |
| ATCTCGTAACCGCTCCAGAT+CGG | + | chr1.2:18170077-18170096 | MS.gene040883:intron | 50.0% | |
| ATGCATGGGATTGCAGTGCA+TGG | + | chr1.2:18167972-18167991 | MS.gene040883:CDS | 50.0% | |
| CAACCCTGTCACGACACAAT+TGG | - | chr1.2:18167075-18167094 | None:intergenic | 50.0% | |
| CAGCAAGTGCCAGCCAATAA+AGG | - | chr1.2:18169212-18169231 | None:intergenic | 50.0% | |
| CCCATGCATACACCAAACAC+AGG | - | chr1.2:18167961-18167980 | None:intergenic | 50.0% | |
| CCGAAATGACGAGCTAACAG+TGG | + | chr1.2:18167577-18167596 | MS.gene040883:CDS | 50.0% | |
| CCTATTGTAATGGCTCAGCC+AGG | - | chr1.2:18168254-18168273 | None:intergenic | 50.0% | |
| CCTGGCTGAGCCATTACAAT+AGG | + | chr1.2:18168251-18168270 | MS.gene040883:intron | 50.0% | |
| CGCAATTGCGGCTGCAATAT+AGG | - | chr1.2:18168625-18168644 | None:intergenic | 50.0% | |
| CTCCTTCTGGTGTGATGCAT+GGG | + | chr1.2:18168319-18168338 | MS.gene040883:CDS | 50.0% | |
| CTGTCACGACACAATTGGGA+CGG | - | chr1.2:18167070-18167089 | None:intergenic | 50.0% | |
| GATAGGGTCCAAGAAAGGGT+CGG | + | chr1.2:18168936-18168955 | MS.gene040883:intron | 50.0% | |
| GGCAACATCATTTCTTCCCC+TGG | + | chr1.2:18168233-18168252 | MS.gene040883:intron | 50.0% | |
| GGTGATATCAGCACTCCTCT+CGG | - | chr1.2:18167724-18167743 | None:intergenic | 50.0% | |
| GGTTACGAGATCGGAAACGA+CGG | - | chr1.2:18170068-18170087 | None:intergenic | 50.0% | |
| GTCCCAATTGTGTCGTGACA+GGG | + | chr1.2:18167069-18167088 | MS.gene040883:intron | 50.0% | |
| GTTACACCACAAACCCATCG+GGG | - | chr1.2:18166997-18167016 | None:intergenic | 50.0% | |
| TCAGGGGTAATGATGCTCTC+TGG | - | chr1.2:18170565-18170584 | None:intergenic | 50.0% | |
| TCCACCACAGCAGTTCAAGT+TGG | + | chr1.2:18170410-18170429 | MS.gene040883:intron | 50.0% | |
| TGAGGCCAAAAGGGGAAAAG+GGG | + | chr1.2:18166395-18166414 | MS.gene040883:CDS | 50.0% | |
| TGCATGGGATTGCAGTGCAT+GGG | + | chr1.2:18167973-18167992 | MS.gene040883:CDS | 50.0% | |
| TGCATTTGTGGTCGCGATTG+CGG | + | chr1.2:18168522-18168541 | MS.gene040883:intron | 50.0% | |
| TTCCCATGCATCACACCAGA+AGG | - | chr1.2:18168324-18168343 | None:intergenic | 50.0% | |
| TTGATTTCGACCCGGTTCAG+AGG | - | chr1.2:18169977-18169996 | None:intergenic | 50.0% | |
| ! | AAAAGCGCGGATAATGCAGG+TGG | - | chr1.2:18169151-18169170 | None:intergenic | 50.0% |
| ! | AGGGTACTTGAGGGAAGTTG+AGG | - | chr1.2:18166281-18166300 | None:intergenic | 50.0% |
| ! | ATCTGGAGCGGTTACGAGAT+CGG | - | chr1.2:18170077-18170096 | None:intergenic | 50.0% |
| ! | CACAACCCCTTTTCCCCTTT+TGG | - | chr1.2:18166403-18166422 | None:intergenic | 50.0% |
| ! | CTCAAAAGCGCGGATAATGC+AGG | - | chr1.2:18169154-18169173 | None:intergenic | 50.0% |
| ! | GAAAGGGTCGGATCCGATTT+TGG | + | chr1.2:18168948-18168967 | MS.gene040883:intron | 50.0% |
| ! | GAGATGGGTTTGGTTGAAGG+AGG | - | chr1.2:18166235-18166254 | None:intergenic | 50.0% |
| ! | GTTGGTGCTTCCTCATCTGT+TGG | - | chr1.2:18169546-18169565 | None:intergenic | 50.0% |
| !! | AGAGGAGTGCTGATATCACC+TGG | + | chr1.2:18167724-18167743 | MS.gene040883:CDS | 50.0% |
| !! | GAGAGCATCATTACCCCTGA+CGG | + | chr1.2:18170565-18170584 | MS.gene040883:CDS | 50.0% |
| !! | GAGGAGTGCTGATATCACCT+GGG | + | chr1.2:18167725-18167744 | MS.gene040883:CDS | 50.0% |
| !! | GATGAGGAAGCACCAACAAC+AGG | + | chr1.2:18169549-18169568 | MS.gene040883:intron | 50.0% |
| !! | TGCGATCTTCCGCTTTTCCT+CGG | + | chr1.2:18170026-18170045 | MS.gene040883:intron | 50.0% |
| ACAACCATGGTCCAGACCCT+AGG | - | chr1.2:18169389-18169408 | None:intergenic | 55.0% | |
| AGGCAATCTTTACCTGGCCC+AGG | - | chr1.2:18167745-18167764 | None:intergenic | 55.0% | |
| CAGTGCATGGGAGAGGCTTT+CGG | + | chr1.2:18167985-18168004 | MS.gene040883:CDS | 55.0% | |
| CCGCAATGGTATCGCAAGTG+CGG | - | chr1.2:18168588-18168607 | None:intergenic | 55.0% | |
| CCGCACTTGCGATACCATTG+CGG | + | chr1.2:18168585-18168604 | MS.gene040883:intron | 55.0% | |
| CGGGTCATCAACCTCTGAAC+CGG | + | chr1.2:18169963-18169982 | MS.gene040883:intron | 55.0% | |
| CGTCCCAATTGTGTCGTGAC+AGG | + | chr1.2:18167068-18167087 | MS.gene040883:intron | 55.0% | |
| GAATCCTAGGGTCTGGACCA+TGG | + | chr1.2:18169382-18169401 | MS.gene040883:intron | 55.0% | |
| GACAATCGTCTTGCCGTCAG+GGG | - | chr1.2:18170581-18170600 | None:intergenic | 55.0% | |
| GCAGTACGCAACCGCAATTG+CGG | - | chr1.2:18168637-18168656 | None:intergenic | 55.0% | |
| GCCAACTTGAACTGCTGTGG+TGG | - | chr1.2:18170414-18170433 | None:intergenic | 55.0% | |
| GCTCCTTCTGGTGTGATGCA+TGG | + | chr1.2:18168318-18168337 | MS.gene040883:CDS | 55.0% | |
| GGACAATCGTCTTGCCGTCA+GGG | - | chr1.2:18170582-18170601 | None:intergenic | 55.0% | |
| GGGGAAATTGCAACCCCGAT+GGG | + | chr1.2:18166981-18167000 | MS.gene040883:intron | 55.0% | |
| GGGTCATCAACCTCTGAACC+GGG | + | chr1.2:18169964-18169983 | MS.gene040883:intron | 55.0% | |
| TAACCGCTCCAGATCGGTGA+TGG | + | chr1.2:18170083-18170102 | MS.gene040883:intron | 55.0% | |
| TACGAGATCGGAAACGACGG+CGG | - | chr1.2:18170065-18170084 | None:intergenic | 55.0% | |
| TGGACAATCGTCTTGCCGTC+AGG | - | chr1.2:18170583-18170602 | None:intergenic | 55.0% | |
| TGGGGAAATTGCAACCCCGA+TGG | + | chr1.2:18166980-18166999 | MS.gene040883:intron | 55.0% | |
| ! | GAAACGGGTCGATTCCATGC+TGG | + | chr1.2:18169912-18169931 | MS.gene040883:intron | 55.0% |
| ! | TTGCAACCCCGATGGGTTTG+TGG | + | chr1.2:18166988-18167007 | MS.gene040883:intron | 55.0% |
| ATTCCATGCTGGACGGTGCC+GGG | + | chr1.2:18169923-18169942 | MS.gene040883:intron | 60.0% | |
| GATTCCATGCTGGACGGTGC+CGG | + | chr1.2:18169922-18169941 | MS.gene040883:intron | 60.0% | |
| GGGATTGCAGTGCATGGGAG+AGG | + | chr1.2:18167978-18167997 | MS.gene040883:CDS | 60.0% | |
| TGCATGGGAGAGGCTTTCGG+CGG | + | chr1.2:18167988-18168007 | MS.gene040883:CDS | 60.0% | |
| TGTCGTGACAGGGTTGCACG+CGG | + | chr1.2:18167079-18167098 | MS.gene040883:intron | 60.0% | |
| ! | CGGGTCGATTCCATGCTGGA+CGG | + | chr1.2:18169916-18169935 | MS.gene040883:intron | 60.0% |
| ! | GTGCTGATATCACCTGGGCC+AGG | + | chr1.2:18167730-18167749 | MS.gene040883:CDS | 60.0% |
| ! | TCCAGATCGGTGATGGCCGT+CGG | + | chr1.2:18170090-18170109 | MS.gene040883:intron | 60.0% |
| CGGCCATCACCGATCTGGAG+CGG | - | chr1.2:18170089-18170108 | None:intergenic | 65.0% | |
| GATCGGAAACGACGGCGGAG+CGG | - | chr1.2:18170060-18170079 | None:intergenic | 65.0% | |
| TCCGACGGCCATCACCGATC+TGG | - | chr1.2:18170094-18170113 | None:intergenic | 65.0% | |
| ! | TTGATGACCCGACCCGACCC+GGG | - | chr1.2:18169954-18169973 | None:intergenic | 65.0% |
| !! | GTTGATGACCCGACCCGACC+CGG | - | chr1.2:18169955-18169974 | None:intergenic | 65.0% |
| TGATGACCCGACCCGACCCG+GGG | - | chr1.2:18169953-18169972 | None:intergenic | 70.0% | |
| !! | TCCGCTTTTCCTCGGCGCGC+CGG | + | chr1.2:18170034-18170053 | MS.gene040883:intron | 70.0% |
| GCCGGCGCGCCGAGGAAAAG+CGG | - | chr1.2:18170038-18170057 | None:intergenic | 75.0% | |
| GGAAACGACGGCGGAGCGGC+CGG | - | chr1.2:18170056-18170075 | None:intergenic | 75.0% | |
| TGGCCCGGCACCGTCCAGCA+TGG | - | chr1.2:18169929-18169948 | None:intergenic | 75.0% | |
| ! | GACCCGACCCGACCCGGGGT+TGG | - | chr1.2:18169949-18169968 | None:intergenic | 80.0% |
| ! | GGCCAACCCCGGGTCGGGTC+GGG | + | chr1.2:18169944-18169963 | MS.gene040883:intron | 80.0% |
| ! | GGGCCAACCCCGGGTCGGGT+CGG | + | chr1.2:18169943-18169962 | MS.gene040883:intron | 80.0% |
| ! | GTGCCGGGCCAACCCCGGGT+CGG | + | chr1.2:18169938-18169957 | MS.gene040883:intron | 80.0% |
| ! | TGCCGGGCCAACCCCGGGTC+GGG | + | chr1.2:18169939-18169958 | MS.gene040883:intron | 80.0% |
| !! | GACGGTGCCGGGCCAACCCC+GGG | + | chr1.2:18169934-18169953 | MS.gene040883:intron | 80.0% |
| !! | GGACGGTGCCGGGCCAACCC+CGG | + | chr1.2:18169933-18169952 | MS.gene040883:intron | 80.0% |
| !!! | GACCCGACCCGGGGTTGGCC+CGG | - | chr1.2:18169944-18169963 | None:intergenic | 80.0% |
| ! | GCGGAGCGGCCGGCGCGCCG+AGG | - | chr1.2:18170046-18170065 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 18166203 | 18170648 | 18166203 | ID=MS.gene040883 |
| chr1.2 | mRNA | 18166203 | 18170648 | 18166203 | ID=MS.gene040883.t1;Parent=MS.gene040883 |
| chr1.2 | exon | 18166203 | 18166293 | 18166203 | ID=MS.gene040883.t1.exon1;Parent=MS.gene040883.t1 |
| chr1.2 | CDS | 18166203 | 18166293 | 18166203 | ID=cds.MS.gene040883.t1;Parent=MS.gene040883.t1 |
| chr1.2 | exon | 18166385 | 18166548 | 18166385 | ID=MS.gene040883.t1.exon2;Parent=MS.gene040883.t1 |
| chr1.2 | CDS | 18166385 | 18166548 | 18166385 | ID=cds.MS.gene040883.t1;Parent=MS.gene040883.t1 |
| chr1.2 | exon | 18167542 | 18167612 | 18167542 | ID=MS.gene040883.t1.exon3;Parent=MS.gene040883.t1 |
| chr1.2 | CDS | 18167542 | 18167612 | 18167542 | ID=cds.MS.gene040883.t1;Parent=MS.gene040883.t1 |
| chr1.2 | exon | 18167714 | 18167751 | 18167714 | ID=MS.gene040883.t1.exon4;Parent=MS.gene040883.t1 |
| chr1.2 | CDS | 18167714 | 18167751 | 18167714 | ID=cds.MS.gene040883.t1;Parent=MS.gene040883.t1 |
| chr1.2 | exon | 18167899 | 18168009 | 18167899 | ID=MS.gene040883.t1.exon5;Parent=MS.gene040883.t1 |
| chr1.2 | CDS | 18167899 | 18168009 | 18167899 | ID=cds.MS.gene040883.t1;Parent=MS.gene040883.t1 |
| chr1.2 | exon | 18168304 | 18168403 | 18168304 | ID=MS.gene040883.t1.exon6;Parent=MS.gene040883.t1 |
| chr1.2 | CDS | 18168304 | 18168403 | 18168304 | ID=cds.MS.gene040883.t1;Parent=MS.gene040883.t1 |
| chr1.2 | exon | 18168764 | 18168899 | 18168764 | ID=MS.gene040883.t1.exon7;Parent=MS.gene040883.t1 |
| chr1.2 | CDS | 18168764 | 18168899 | 18168764 | ID=cds.MS.gene040883.t1;Parent=MS.gene040883.t1 |
| chr1.2 | exon | 18170547 | 18170648 | 18170547 | ID=MS.gene040883.t1.exon8;Parent=MS.gene040883.t1 |
| chr1.2 | CDS | 18170547 | 18170648 | 18170547 | ID=cds.MS.gene040883.t1;Parent=MS.gene040883.t1 |
| Gene Sequence |
| Protein sequence |
