Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93138.t1 | XP_003592715.1 | 99.5 | 773 | 4 | 0 | 1 | 773 | 1 | 773 | 0.00E+00 | 1396.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93138.t1 | Q93ZY3 | 84.7 | 769 | 112 | 3 | 8 | 773 | 13 | 778 | 0.0e+00 | 1209.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93138.t1 | G7IE81 | 99.5 | 773 | 4 | 0 | 1 | 773 | 1 | 773 | 0.0e+00 | 1396.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05210 | MS.gene93138 | 0.805167 | 1.52E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93138 | MS.gene50024 | PPI |
| MS.gene93138 | MS.gene37721 | PPI |
| MS.gene93138 | MS.gene05210 | PPI |
| MS.gene93138 | MS.gene57836 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93138.t1 | MTR_1g114250 | 99.612 | 773 | 3 | 0 | 1 | 773 | 1 | 773 | 0.0 | 1573 |
| MS.gene93138.t1 | MTR_6g077750 | 52.517 | 735 | 291 | 9 | 23 | 745 | 38 | 726 | 0.0 | 726 |
| MS.gene93138.t1 | MTR_6g077750 | 50.079 | 633 | 263 | 7 | 23 | 648 | 38 | 624 | 0.0 | 585 |
| MS.gene93138.t1 | MTR_2g030440 | 49.650 | 143 | 24 | 4 | 416 | 558 | 2 | 96 | 1.98e-26 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93138.t1 | AT5G19690 | 86.476 | 769 | 98 | 3 | 8 | 773 | 13 | 778 | 0.0 | 1343 |
| MS.gene93138.t1 | AT5G19690 | 86.874 | 739 | 91 | 3 | 38 | 773 | 2 | 737 | 0.0 | 1297 |
| MS.gene93138.t1 | AT1G34130 | 52.049 | 732 | 303 | 7 | 22 | 746 | 45 | 735 | 0.0 | 731 |
Find 180 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTGGCCTTCTTACTTTA+TGG | 0.093285 | 1.1:+80368057 | MS.gene93138:CDS |
| TGAGCACTTTGCATCATTTC+TGG | 0.185711 | 1.1:+80366392 | MS.gene93138:CDS |
| CACTTTCTATCTCTATATTA+AGG | 0.191809 | 1.1:+80365279 | MS.gene93138:CDS |
| AACGGAAAACTAAACTAAAA+AGG | 0.216627 | 1.1:-80371881 | None:intergenic |
| TTTCCCCGAATCCTGTTCTT+TGG | 0.253211 | 1.1:-80371690 | None:intergenic |
| TGTATAAACTTTCATATTAC+AGG | 0.253725 | 1.1:+80370920 | MS.gene93138:CDS |
| CTTGACAGCAGCAGTTCTTC+TGG | 0.274216 | 1.1:+80364875 | MS.gene93138:CDS |
| ACAAATTAAGAAAAGGCTTT+TGG | 0.276228 | 1.1:+80368776 | MS.gene93138:CDS |
| AAATATGTTCTTGTCGTCTT+TGG | 0.281791 | 1.1:+80370519 | MS.gene93138:CDS |
| TCCTATAGGTTCACAGTGTA+TGG | 0.283509 | 1.1:+80369273 | MS.gene93138:intron |
| TATTGTCTTACTTGTGTTGC+TGG | 0.288557 | 1.1:+80368827 | MS.gene93138:CDS |
| CCAGCGGCTTGCATCTTGTC+TGG | 0.292555 | 1.1:+80368430 | MS.gene93138:CDS |
| GCTCTTGTATACTATATTAA+AGG | 0.296672 | 1.1:+80367159 | MS.gene93138:CDS |
| CCAATATCGAATTGATAATA+TGG | 0.301616 | 1.1:+80370870 | MS.gene93138:CDS |
| GAACAAATGCTTACATTAAC+AGG | 0.304740 | 1.1:-80368529 | None:intergenic |
| TTTACCAATTCAGGTTGTAT+TGG | 0.320605 | 1.1:+80366314 | MS.gene93138:intron |
| CCATATTATCAATTCGATAT+TGG | 0.321395 | 1.1:-80370870 | None:intergenic |
| AGAATGGGATATATGACTTT+TGG | 0.322168 | 1.1:+80364300 | MS.gene93138:CDS |
| CTTCCACTCCATCCCATTGT+TGG | 0.323390 | 1.1:-80367389 | None:intergenic |
| TTCCACTCCATCCCATTGTT+GGG | 0.336031 | 1.1:-80367388 | None:intergenic |
| TGTATGACTTACCAAGTAAT+CGG | 0.341627 | 1.1:-80370705 | None:intergenic |
| TTACCAATTCAGGTTGTATT+GGG | 0.344911 | 1.1:+80366315 | MS.gene93138:intron |
| TATTCTCAGCCTTTGCTTCA+TGG | 0.346243 | 1.1:+80364723 | MS.gene93138:CDS |
| TTCTCCAGAAAAGGCTGCTT+GGG | 0.355080 | 1.1:+80370473 | MS.gene93138:CDS |
| TTGTAGGAGGTTAAGGGTGC+TGG | 0.359087 | 1.1:+80364846 | MS.gene93138:intron |
| GTAGTACATGCATTGGAATA+AGG | 0.361059 | 1.1:-80365859 | None:intergenic |
| ACCTCCAAAGAACAGGATTC+GGG | 0.363455 | 1.1:+80371686 | MS.gene93138:CDS |
| CATAAAGGAACCCGATTACT+TGG | 0.377882 | 1.1:+80370694 | MS.gene93138:CDS |
| GCTGCATTGGTACCTGTTGT+TGG | 0.386627 | 1.1:+80366348 | MS.gene93138:CDS |
| CCCCGAATCCTGTTCTTTGG+AGG | 0.389569 | 1.1:-80371687 | None:intergenic |
| ATGGTTATTATTAGGATTGG+TGG | 0.397944 | 1.1:+80370604 | MS.gene93138:intron |
| TGTGATGTTAGAACGATAGA+AGG | 0.398580 | 1.1:-80369320 | None:intergenic |
| AACCTCCAAAGAACAGGATT+CGG | 0.404800 | 1.1:+80371685 | MS.gene93138:CDS |
| TAAAGTAAGAAGGCCAAGTT+GGG | 0.408489 | 1.1:-80368054 | None:intergenic |
| GAGGTTAAGGGTGCTGGAGC+TGG | 0.411374 | 1.1:+80364852 | MS.gene93138:CDS |
| TATCCCCTTGGTCGTGTAAT+CGG | 0.411602 | 1.1:+80364464 | MS.gene93138:CDS |
| GGTTAGCCATTGCAGTTGTT+TGG | 0.415001 | 1.1:-80370383 | None:intergenic |
| GTCATGTAGACGCTGAATAC+AGG | 0.417327 | 1.1:+80365675 | MS.gene93138:intron |
| AGAGTGAGGCGGACGGAGAT+TGG | 0.418608 | 1.1:+80371059 | MS.gene93138:CDS |
| ACCTCTCTCCGCCACGCATT+CGG | 0.419044 | 1.1:+80363416 | MS.gene93138:CDS |
| GTACTACTGTGCATAGTAAC+TGG | 0.420792 | 1.1:+80365875 | MS.gene93138:CDS |
| GACTGGTTACTTACCAAGTT+CGG | 0.421877 | 1.1:-80364337 | None:intergenic |
| TATGTTCTTGTCGTCTTTGG+AGG | 0.426776 | 1.1:+80370522 | MS.gene93138:CDS |
| ATTGCTTTGCTACAGGTTTG+TGG | 0.427254 | 1.1:+80371013 | MS.gene93138:intron |
| GTGGCATCTTGGTGGGATTA+CGG | 0.428437 | 1.1:+80370357 | MS.gene93138:CDS |
| ATTCTCAGCCTTTGCTTCAT+GGG | 0.429291 | 1.1:+80364724 | MS.gene93138:CDS |
| CAGCGGCTTGCATCTTGTCT+GGG | 0.432117 | 1.1:+80368431 | MS.gene93138:CDS |
| AGCAATATGAGTGTTATTCC+AGG | 0.433272 | 1.1:-80370430 | None:intergenic |
| CTATGGATGGTTCGTATTGG+AGG | 0.434774 | 1.1:+80370656 | MS.gene93138:CDS |
| TGGTTATTATTAGGATTGGT+GGG | 0.435208 | 1.1:+80370605 | MS.gene93138:intron |
| GAGTGAGGCGGACGGAGATT+GGG | 0.435397 | 1.1:+80371060 | MS.gene93138:CDS |
| CTTCTCCAGAAAAGGCTGCT+TGG | 0.438560 | 1.1:+80370472 | MS.gene93138:CDS |
| ATGAGGCAGTTAAGCATTGT+TGG | 0.439857 | 1.1:-80370898 | None:intergenic |
| GAAAAGCAAGAAGAAGGAAA+AGG | 0.442161 | 1.1:+80368725 | MS.gene93138:CDS |
| CTTTATGGATATCAATGTCT+TGG | 0.445724 | 1.1:+80368072 | MS.gene93138:CDS |
| CTGGAGCAAGTACAAGCATC+AGG | 0.448117 | 1.1:-80368411 | None:intergenic |
| TTCTTAATTTGTGCCTTGCT+AGG | 0.449491 | 1.1:-80368765 | None:intergenic |
| AGGAGAATCAACTGATAGAC+TGG | 0.449725 | 1.1:-80368509 | None:intergenic |
| CTTGTAGGTGGCATCTTGGT+GGG | 0.453018 | 1.1:+80370350 | MS.gene93138:intron |
| GGGCACACTGTTGGCTGCAT+TGG | 0.454404 | 1.1:+80366335 | MS.gene93138:CDS |
| CGGCACAACACTTTCAGAAC+TGG | 0.457312 | 1.1:-80368646 | None:intergenic |
| TGCAATGTCTTCTCCAGAAA+AGG | 0.461314 | 1.1:+80370464 | MS.gene93138:CDS |
| TCTCATGCAGGTTTGCTCGT+GGG | 0.462564 | 1.1:+80365814 | MS.gene93138:intron |
| ATTTCTTGTAGGTGGCATCT+TGG | 0.462565 | 1.1:+80370346 | MS.gene93138:intron |
| GAACTTATTAATATCATCAC+TGG | 0.463456 | 1.1:-80370633 | None:intergenic |
| GAAGCAAAGGCTGAGAATAT+AGG | 0.466234 | 1.1:-80364719 | None:intergenic |
| TTCTTCATTCTGATCTTGAT+CGG | 0.468540 | 1.1:+80363452 | MS.gene93138:CDS |
| TCTTGTAGGTGGCATCTTGG+TGG | 0.469040 | 1.1:+80370349 | MS.gene93138:intron |
| ATTGTCTTACTTGTGTTGCT+GGG | 0.472888 | 1.1:+80368828 | MS.gene93138:CDS |
| CCTGCTGTCAAGGTCAAACC+TGG | 0.473215 | 1.1:-80364500 | None:intergenic |
| AGTTGAAACCTCCAAAGAAC+AGG | 0.473884 | 1.1:+80371679 | MS.gene93138:CDS |
| GGGTGTATTCCCTCACATAA+AGG | 0.474448 | 1.1:+80370679 | MS.gene93138:CDS |
| CTCATGCAGGTTTGCTCGTG+GGG | 0.474775 | 1.1:+80365815 | MS.gene93138:intron |
| TTCCTATGGATGGTTCGTAT+TGG | 0.479665 | 1.1:+80370653 | MS.gene93138:CDS |
| TCACTAACGCTAGCAATGAT+TGG | 0.481602 | 1.1:-80368022 | None:intergenic |
| TCAGTCTTCACCGTATCATC+CGG | 0.484928 | 1.1:-80368666 | None:intergenic |
| ACTGGTTCGATGACCGAACT+TGG | 0.485698 | 1.1:+80364324 | MS.gene93138:CDS |
| ATGATATTAATAAGTTCCTA+TGG | 0.488616 | 1.1:+80370639 | MS.gene93138:CDS |
| TTCTCATGCAGGTTTGCTCG+TGG | 0.489608 | 1.1:+80365813 | MS.gene93138:intron |
| AACACTCATATTGCTACTGT+TGG | 0.490916 | 1.1:+80370438 | MS.gene93138:CDS |
| AAGTAAGACAATAGCAATGA+TGG | 0.492039 | 1.1:-80368817 | None:intergenic |
| GCAAGGCACAAATTAAGAAA+AGG | 0.493379 | 1.1:+80368769 | MS.gene93138:CDS |
| TATGGATGGTTCGTATTGGA+GGG | 0.494090 | 1.1:+80370657 | MS.gene93138:CDS |
| GCTGTGACACTAGTTGTGTC+TGG | 0.497013 | 1.1:+80367210 | MS.gene93138:CDS |
| TATTGTCAACAATAACAGTT+CGG | 0.497197 | 1.1:-80370404 | None:intergenic |
| CTCAAAGAAAAGCAAGAAGA+AGG | 0.497387 | 1.1:+80368719 | MS.gene93138:CDS |
| ACAGCATTAAATCCAACAAC+AGG | 0.510921 | 1.1:-80366360 | None:intergenic |
| AGCAGCAGTTCTTCTGGCTA+TGG | 0.515928 | 1.1:+80364881 | MS.gene93138:CDS |
| CCAGACAAGATGCAAGCCGC+TGG | 0.517935 | 1.1:-80368430 | None:intergenic |
| TAAAACTGAGGACACACATA+AGG | 0.518883 | 1.1:+80368689 | MS.gene93138:CDS |
| CCCCTTGGTCGTGTAATCGG+TGG | 0.519474 | 1.1:+80364467 | MS.gene93138:CDS |
| AAAGAGCTTGCATCAGATAG+AGG | 0.520232 | 1.1:-80368226 | None:intergenic |
| CACCGAGAGAGGTATGTTCA+AGG | 0.521704 | 1.1:-80364672 | None:intergenic |
| GTGACTCTGTAGTTGAAGTA+AGG | 0.522802 | 1.1:-80364086 | None:intergenic |
| GGTTGTATTGGGCACACTGT+TGG | 0.523631 | 1.1:+80366326 | MS.gene93138:intron |
| CCCTTGGTCGTGTAATCGGT+GGG | 0.527724 | 1.1:+80364468 | MS.gene93138:CDS |
| CCACAAGGTGCCTGCTGTCA+AGG | 0.529010 | 1.1:-80364510 | None:intergenic |
| ATCGGTGGGACTGTCTATCC+AGG | 0.529949 | 1.1:+80364482 | MS.gene93138:CDS |
| TTCCTTGAACATACCTCTCT+CGG | 0.530525 | 1.1:+80364670 | MS.gene93138:CDS |
| TCTGTTTCAAGGTATCCCCT+TGG | 0.530834 | 1.1:+80364452 | MS.gene93138:intron |
| CCTATAGGTTCACAGTGTAT+GGG | 0.531377 | 1.1:+80369274 | MS.gene93138:intron |
| TTTCATTCTCATCCATGTGG+TGG | 0.531505 | 1.1:+80367137 | MS.gene93138:CDS |
| TTGATATCCATAAAGTAAGA+AGG | 0.535263 | 1.1:-80368064 | None:intergenic |
| TATATATCTCGATCAGTGGC+AGG | 0.535279 | 1.1:+80365214 | MS.gene93138:CDS |
| GGTTATTATTAGGATTGGTG+GGG | 0.536163 | 1.1:+80370606 | MS.gene93138:intron |
| GTATGACTTACCAAGTAATC+GGG | 0.539012 | 1.1:-80370704 | None:intergenic |
| TATTAATAAGTTCCTATGGA+TGG | 0.540170 | 1.1:+80370643 | MS.gene93138:CDS |
| AGTTCAAAGTGGCATAAAAG+AGG | 0.544663 | 1.1:-80365701 | None:intergenic |
| GTTGCTGGGTGCTTTCTATG+TGG | 0.546621 | 1.1:+80368842 | MS.gene93138:CDS |
| TTCCAACTTCAAAAGAGGGA+TGG | 0.547855 | 1.1:+80370847 | MS.gene93138:intron |
| CTCAATAGCATACTTCTACA+TGG | 0.551555 | 1.1:+80365722 | MS.gene93138:CDS |
| ATAAAGTAAGAAGGCCAAGT+TGG | 0.552548 | 1.1:-80368055 | None:intergenic |
| GTAGCTGCAAGCCCAACAAT+GGG | 0.558984 | 1.1:+80367377 | MS.gene93138:CDS |
| AGGTGTTCACAACTCACCAT+TGG | 0.561295 | 1.1:+80371640 | MS.gene93138:intron |
| GGTAGCTGCAAGCCCAACAA+TGG | 0.561623 | 1.1:+80367376 | MS.gene93138:CDS |
| ATGCACAGTAGTACATGCAT+TGG | 0.565217 | 1.1:-80365866 | None:intergenic |
| GATAGCAGTACTTGTTGCAA+TGG | 0.565620 | 1.1:+80367355 | MS.gene93138:CDS |
| GTGATGTTAGAACGATAGAA+GGG | 0.568837 | 1.1:-80369319 | None:intergenic |
| CCAGGTTTGACCTTGACAGC+AGG | 0.568939 | 1.1:+80364500 | MS.gene93138:CDS |
| TTAATTTGTGCCTTGCTAGG+AGG | 0.569070 | 1.1:-80368762 | None:intergenic |
| AGCCCAACAATGGGATGGAG+TGG | 0.569349 | 1.1:+80367386 | MS.gene93138:CDS |
| ACCGAATGCGTGGCGGAGAG+AGG | 0.569536 | 1.1:-80363417 | None:intergenic |
| CAGTTCTGAAAGTGTTGTGC+CGG | 0.574257 | 1.1:+80368647 | MS.gene93138:CDS |
| AAGTGTTGTGCCGGATGATA+CGG | 0.578550 | 1.1:+80368656 | MS.gene93138:CDS |
| GGCAACTTATCTATTAACAA+AGG | 0.580157 | 1.1:+80364745 | MS.gene93138:CDS |
| TCATGTAGACGCTGAATACA+GGG | 0.581789 | 1.1:+80365676 | MS.gene93138:intron |
| GATACTTTATATTGTTACAT+CGG | 0.583646 | 1.1:+80368252 | MS.gene93138:CDS |
| CTAACATCACATTCACATGA+TGG | 0.586009 | 1.1:+80369332 | MS.gene93138:CDS |
| TGTGGAAAAGCCTCCTAGCA+AGG | 0.587595 | 1.1:+80368752 | MS.gene93138:CDS |
| TTATTGTTGACAATAATACC+TGG | 0.589759 | 1.1:+80370412 | MS.gene93138:CDS |
| AAATGCTTACGGAGAAAAGA+CGG | 0.590130 | 1.1:-80363493 | None:intergenic |
| TGTATATCCGCACCATCCAA+TGG | 0.591677 | 1.1:-80371656 | None:intergenic |
| CTTCAACTACAGAGTCACTC+AGG | 0.593654 | 1.1:+80364091 | MS.gene93138:CDS |
| GCAGTTAAGCATTGTTGGTG+TGG | 0.594237 | 1.1:-80370893 | None:intergenic |
| CGGATACCAAACAACTGCAA+TGG | 0.596996 | 1.1:+80370377 | MS.gene93138:CDS |
| GCGGAGAGAGGTTTGAGCAT+CGG | 0.597758 | 1.1:-80363405 | None:intergenic |
| TAATCGGGTTCCTTTATGTG+AGG | 0.598243 | 1.1:-80370689 | None:intergenic |
| CTGCAAGCCCAACAATGGGA+TGG | 0.598334 | 1.1:+80367381 | MS.gene93138:CDS |
| CAAACAGTTTCCACCGAGAG+AGG | 0.600577 | 1.1:-80364683 | None:intergenic |
| GGAGAAAAGACGGATCGAGA+AGG | 0.603010 | 1.1:-80363483 | None:intergenic |
| AATCGGGTTCCTTTATGTGA+GGG | 0.603250 | 1.1:-80370688 | None:intergenic |
| GAACTCACGATAATGCCAGC+TGG | 0.606321 | 1.1:-80368106 | None:intergenic |
| GAGAGAGGTTTGAGCATCGG+TGG | 0.612144 | 1.1:-80363402 | None:intergenic |
| ATAAGTTGCCCATGAAGCAA+AGG | 0.612883 | 1.1:-80364732 | None:intergenic |
| ATGCAGGTTTGCTCGTGGGG+AGG | 0.613474 | 1.1:+80365818 | MS.gene93138:intron |
| GAAGAAGGAAAAGGAACCTG+TGG | 0.613616 | 1.1:+80368734 | MS.gene93138:CDS |
| AAGAACATATTTGACATCCA+AGG | 0.613668 | 1.1:-80370508 | None:intergenic |
| CAACTCACCATTGGATGGTG+CGG | 0.617809 | 1.1:+80371649 | MS.gene93138:CDS |
| CCTTGACAGCAGGCACCTTG+TGG | 0.618596 | 1.1:+80364510 | MS.gene93138:CDS |
| AACTTATTAATATCATCACT+GGG | 0.619603 | 1.1:-80370632 | None:intergenic |
| TGGATGGTTCGTATTGGAGG+GGG | 0.620883 | 1.1:+80370659 | MS.gene93138:CDS |
| TACAGGTTTGTGGAGACAGA+CGG | 0.620893 | 1.1:+80371023 | MS.gene93138:intron |
| GTCATATATATCTCGATCAG+TGG | 0.624270 | 1.1:+80365210 | MS.gene93138:CDS |
| ACTGATCGAGATATATATGA+CGG | 0.627086 | 1.1:-80365208 | None:intergenic |
| CTCCAATACGAACCATCCAT+AGG | 0.628467 | 1.1:-80370655 | None:intergenic |
| CTGATCGAGATATATATGAC+GGG | 0.631540 | 1.1:-80365207 | None:intergenic |
| GTTCAAAGTGGCATAAAAGA+GGG | 0.633018 | 1.1:-80365700 | None:intergenic |
| AATATGAAAGTTTATACATG+AGG | 0.635580 | 1.1:-80370915 | None:intergenic |
| TCCCACCGATTACACGACCA+AGG | 0.645079 | 1.1:-80364469 | None:intergenic |
| ATGGATGGTTCGTATTGGAG+GGG | 0.645194 | 1.1:+80370658 | MS.gene93138:CDS |
| TGACAGCAGGCACCTTGTGG+TGG | 0.645256 | 1.1:+80364513 | MS.gene93138:CDS |
| GTGACACTAGTTGTGTCTGG+TGG | 0.649444 | 1.1:+80367213 | MS.gene93138:CDS |
| GTTCACAACTCACCATTGGA+TGG | 0.649815 | 1.1:+80371644 | MS.gene93138:CDS |
| CCCACCGATTACACGACCAA+GGG | 0.652187 | 1.1:-80364468 | None:intergenic |
| TATAAAGTCGAGAAGAATAG+CGG | 0.656209 | 1.1:-80365898 | None:intergenic |
| GATGCTTGTACTTGCTCCAG+CGG | 0.657300 | 1.1:+80368414 | MS.gene93138:CDS |
| CGAGAACGTTACCGAATGCG+TGG | 0.658465 | 1.1:-80363427 | None:intergenic |
| AGTATACAAGAGCCACCACA+TGG | 0.669038 | 1.1:-80367149 | None:intergenic |
| GGAGAATCAACTGATAGACT+GGG | 0.675821 | 1.1:-80368508 | None:intergenic |
| CCTCCAAAGAACAGGATTCG+GGG | 0.676717 | 1.1:+80371687 | MS.gene93138:CDS |
| TGATGTTAGAACGATAGAAG+GGG | 0.680784 | 1.1:-80369318 | None:intergenic |
| AAATACCACCTACCACCACA+AGG | 0.682831 | 1.1:-80364525 | None:intergenic |
| CTTGAACATACCTCTCTCGG+TGG | 0.689126 | 1.1:+80364673 | MS.gene93138:CDS |
| GTATGCTATTGAGTTCAAAG+TGG | 0.693577 | 1.1:-80365712 | None:intergenic |
| CCACCGATTACACGACCAAG+GGG | 0.697270 | 1.1:-80364467 | None:intergenic |
| AAAGTAAGAAGGCCAAGTTG+GGG | 0.698949 | 1.1:-80368053 | None:intergenic |
| AAGTAAGAAGGCCAAGTTGG+GGG | 0.702179 | 1.1:-80368052 | None:intergenic |
| GAACGTTACCGAATGCGTGG+CGG | 0.702556 | 1.1:-80363424 | None:intergenic |
| GCAATGATGGATGTTTCCAG+AGG | 0.714647 | 1.1:-80368804 | None:intergenic |
| GGTGAAGACTGATAAAACTG+AGG | 0.726733 | 1.1:+80368677 | MS.gene93138:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 80363395 | 80371889 | 80363395 | ID=MS.gene93138 |
| chr1.1 | mRNA | 80363395 | 80371889 | 80363395 | ID=MS.gene93138.t1;Parent=MS.gene93138 |
| chr1.1 | exon | 80363395 | 80363505 | 80363395 | ID=MS.gene93138.t1.exon1;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80363395 | 80363505 | 80363395 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80364050 | 80364112 | 80364050 | ID=MS.gene93138.t1.exon2;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80364050 | 80364112 | 80364050 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80364290 | 80364345 | 80364290 | ID=MS.gene93138.t1.exon3;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80364290 | 80364345 | 80364290 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80364463 | 80364534 | 80364463 | ID=MS.gene93138.t1.exon4;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80364463 | 80364534 | 80364463 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80364661 | 80364766 | 80364661 | ID=MS.gene93138.t1.exon5;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80364661 | 80364766 | 80364661 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80364852 | 80364902 | 80364852 | ID=MS.gene93138.t1.exon6;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80364852 | 80364902 | 80364852 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80365205 | 80365300 | 80365205 | ID=MS.gene93138.t1.exon7;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80365205 | 80365300 | 80365205 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80365684 | 80365743 | 80365684 | ID=MS.gene93138.t1.exon8;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80365684 | 80365743 | 80365684 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80365824 | 80365937 | 80365824 | ID=MS.gene93138.t1.exon9;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80365824 | 80365937 | 80365824 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80366327 | 80366413 | 80366327 | ID=MS.gene93138.t1.exon10;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80366327 | 80366413 | 80366327 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80367135 | 80367238 | 80367135 | ID=MS.gene93138.t1.exon11;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80367135 | 80367238 | 80367135 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80367337 | 80367432 | 80367337 | ID=MS.gene93138.t1.exon12;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80367337 | 80367432 | 80367337 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80368000 | 80368120 | 80368000 | ID=MS.gene93138.t1.exon13;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80368000 | 80368120 | 80368000 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80368214 | 80368294 | 80368214 | ID=MS.gene93138.t1.exon14;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80368214 | 80368294 | 80368214 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80368406 | 80368537 | 80368406 | ID=MS.gene93138.t1.exon15;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80368406 | 80368537 | 80368406 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80368636 | 80368863 | 80368636 | ID=MS.gene93138.t1.exon16;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80368636 | 80368863 | 80368636 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80369281 | 80369424 | 80369281 | ID=MS.gene93138.t1.exon17;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80369281 | 80369424 | 80369281 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80370357 | 80370543 | 80370357 | ID=MS.gene93138.t1.exon18;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80370357 | 80370543 | 80370357 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80370618 | 80370715 | 80370618 | ID=MS.gene93138.t1.exon19;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80370618 | 80370715 | 80370618 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80370862 | 80370941 | 80370862 | ID=MS.gene93138.t1.exon20;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80370862 | 80370941 | 80370862 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80371028 | 80371115 | 80371028 | ID=MS.gene93138.t1.exon21;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80371028 | 80371115 | 80371028 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80371642 | 80371731 | 80371642 | ID=MS.gene93138.t1.exon22;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80371642 | 80371731 | 80371642 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| chr1.1 | exon | 80371833 | 80371889 | 80371833 | ID=MS.gene93138.t1.exon23;Parent=MS.gene93138.t1 |
| chr1.1 | CDS | 80371833 | 80371889 | 80371833 | ID=cds.MS.gene93138.t1;Parent=MS.gene93138.t1 |
| Gene Sequence |
| Protein sequence |
