Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93179.t1 | XP_013466478.1 | 98.8 | 328 | 4 | 0 | 1 | 328 | 1 | 328 | 6.90E-188 | 666.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93179.t1 | Q9XHZ8 | 71.6 | 328 | 89 | 1 | 1 | 328 | 1 | 324 | 2.3e-139 | 496.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93179.t1 | A0A072VES8 | 98.8 | 328 | 4 | 0 | 1 | 328 | 1 | 328 | 5.0e-188 | 666.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene93179.t1 | TR | TRAF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93179 | MS.gene53169 | PPI |
| MS.gene93179 | MS.gene95889 | PPI |
| MS.gene93179 | MS.gene93783 | PPI |
| MS.gene93179 | MS.gene55382 | PPI |
| MS.gene93179 | MS.gene99693 | PPI |
| MS.gene62620 | MS.gene93179 | PPI |
| MS.gene040151 | MS.gene93179 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93179.t1 | MTR_1g029850 | 98.780 | 328 | 4 | 0 | 1 | 328 | 1 | 328 | 0.0 | 675 |
| MS.gene93179.t1 | MTR_3g088560 | 72.866 | 328 | 82 | 4 | 1 | 326 | 1 | 323 | 4.70e-176 | 491 |
| MS.gene93179.t1 | MTR_3g088560 | 72.917 | 240 | 63 | 2 | 89 | 326 | 14 | 253 | 1.04e-124 | 358 |
| MS.gene93179.t1 | MTR_3g088560 | 68.421 | 266 | 78 | 4 | 63 | 326 | 7 | 268 | 8.79e-124 | 356 |
| MS.gene93179.t1 | MTR_3g061090 | 50.755 | 331 | 157 | 3 | 1 | 328 | 1 | 328 | 1.95e-119 | 347 |
| MS.gene93179.t1 | MTR_3g088560 | 72.637 | 201 | 53 | 2 | 128 | 326 | 1 | 201 | 7.24e-102 | 298 |
| MS.gene93179.t1 | MTR_5g096700 | 44.615 | 325 | 175 | 3 | 5 | 328 | 9 | 329 | 4.18e-98 | 293 |
| MS.gene93179.t1 | MTR_3g061090 | 48.425 | 254 | 130 | 1 | 76 | 328 | 3 | 256 | 1.58e-82 | 251 |
| MS.gene93179.t1 | MTR_5g096700 | 42.125 | 273 | 153 | 3 | 57 | 328 | 2 | 270 | 5.22e-72 | 224 |
| MS.gene93179.t1 | MTR_5g096790 | 34.234 | 333 | 189 | 9 | 5 | 324 | 7 | 322 | 2.81e-55 | 183 |
| MS.gene93179.t1 | MTR_7g094490 | 23.567 | 314 | 194 | 8 | 14 | 291 | 41 | 344 | 6.40e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93179.t1 | AT1G21780 | 71.646 | 328 | 89 | 1 | 1 | 328 | 1 | 324 | 0.0 | 506 |
| MS.gene93179.t1 | AT1G21780 | 71.646 | 328 | 89 | 1 | 1 | 328 | 1 | 324 | 0.0 | 506 |
| MS.gene93179.t1 | AT1G55760 | 47.892 | 332 | 164 | 5 | 1 | 328 | 1 | 327 | 1.49e-109 | 322 |
| MS.gene93179.t1 | AT2G39760 | 30.719 | 153 | 95 | 1 | 150 | 291 | 179 | 331 | 5.33e-13 | 69.3 |
| MS.gene93179.t1 | AT2G39760 | 30.719 | 153 | 95 | 1 | 150 | 291 | 179 | 331 | 5.77e-13 | 69.3 |
| MS.gene93179.t1 | AT2G39760 | 30.719 | 153 | 95 | 1 | 150 | 291 | 179 | 331 | 5.77e-13 | 69.3 |
| MS.gene93179.t1 | AT2G39760 | 30.719 | 153 | 95 | 1 | 150 | 291 | 179 | 331 | 1.10e-12 | 68.6 |
Find 73 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCCTTTCAAACTTGGTATT+TGG | 0.128764 | 1.3:+15801208 | MS.gene93179:CDS |
| CGCAACCTCTCCTGTGTTTC+AGG | 0.153472 | 1.3:+15804519 | MS.gene93179:CDS |
| CAATAAAACCCGAAGATTTC+TGG | 0.200729 | 1.3:+15804644 | MS.gene93179:CDS |
| CAATGGAAAATCGACAATTT+TGG | 0.203214 | 1.3:+15801162 | MS.gene93179:CDS |
| AGTGCTTACGATTTGGAAAT+AGG | 0.233751 | 1.3:+15804933 | MS.gene93179:CDS |
| TGAACCTTCGCGTGTTTCTA+AGG | 0.294946 | 1.3:+15801366 | MS.gene93179:CDS |
| AATTAGAGACTCACATTTAG+AGG | 0.296472 | 1.3:-15804078 | None:intergenic |
| TTTGCATTCTTGTTTGATTT+CGG | 0.309873 | 1.3:+15804829 | MS.gene93179:CDS |
| CTGTGCTTCCAGAAATCTTC+GGG | 0.311859 | 1.3:-15804652 | None:intergenic |
| TTCAAGAAGTGCTTACGATT+TGG | 0.314099 | 1.3:+15804926 | MS.gene93179:CDS |
| TTAGAAACACGCGAAGGTTC+AGG | 0.373550 | 1.3:-15801364 | None:intergenic |
| TGTACCATCTGCGGTTATAA+TGG | 0.375371 | 1.3:-15804470 | None:intergenic |
| AGAAGAAGAAGAAGCAGTAT+TGG | 0.384918 | 1.3:-15801425 | None:intergenic |
| TCAAACTTGGTATTTGGAAC+TGG | 0.400132 | 1.3:+15801214 | MS.gene93179:CDS |
| CAATTTCCCGATTAGCTCAA+TGG | 0.401221 | 1.3:+15801145 | MS.gene93179:CDS |
| AAATCAGACCCTTTCAAACT+TGG | 0.408826 | 1.3:+15801201 | MS.gene93179:CDS |
| CGAAGAATGAAACGAGCAAT+AGG | 0.409761 | 1.3:-15801397 | None:intergenic |
| CCTGTGCTTCCAGAAATCTT+CGG | 0.410951 | 1.3:-15804653 | None:intergenic |
| CTTTCTTCAACTTGTGCAGC+TGG | 0.413291 | 1.3:-15804801 | None:intergenic |
| ATTTGTCGATAGAGAGAAAC+AGG | 0.424241 | 1.3:+15801320 | MS.gene93179:CDS |
| AAGCACAGGCTGGCATTGCT+TGG | 0.427569 | 1.3:+15804667 | MS.gene93179:CDS |
| GAACCTGTGATGACTTTGTC+TGG | 0.430022 | 1.3:+15803989 | MS.gene93179:CDS |
| AGGGGAAATGTAAAATTTGC+GGG | 0.434591 | 1.3:-15801452 | None:intergenic |
| TTCCAAATACCAAGTTTGAA+AGG | 0.463827 | 1.3:-15801210 | None:intergenic |
| TGATACGAGGCCTGAAACAC+AGG | 0.468973 | 1.3:-15804529 | None:intergenic |
| TCCAAATACCAAGTTTGAAA+GGG | 0.471833 | 1.3:-15801209 | None:intergenic |
| ATCAGATGGCCATATGGAAC+TGG | 0.472723 | 1.3:-15804365 | None:intergenic |
| TGCAGACCGGGAGCTCATGC+TGG | 0.475204 | 1.3:+15804897 | MS.gene93179:CDS |
| AACCGCAGATGGTACACTTA+AGG | 0.477023 | 1.3:+15804477 | MS.gene93179:CDS |
| TCGATAGGCTTAATGAGGCC+TGG | 0.483089 | 1.3:+15804773 | MS.gene93179:CDS |
| CCTGTGGATACTACATTCCT+TGG | 0.490016 | 1.3:+15804012 | MS.gene93179:CDS |
| GTATCTCAGAAGGGCCGTGC+AGG | 0.498716 | 1.3:-15804611 | None:intergenic |
| CCGAGTTAAGATCTTCAAGT+AGG | 0.498960 | 1.3:-15804741 | None:intergenic |
| ACATCTCCAGCATGAGCTCC+CGG | 0.506500 | 1.3:-15804903 | None:intergenic |
| CAAGCATACGAGAGAGGCAT+CGG | 0.514573 | 1.3:-15804423 | None:intergenic |
| CTTGTGACATGTCTTCTATG+TGG | 0.517852 | 1.3:-15804585 | None:intergenic |
| CAGGGGAAATGTAAAATTTG+CGG | 0.522009 | 1.3:-15801453 | None:intergenic |
| CCTACTTGAAGATCTTAACT+CGG | 0.524632 | 1.3:+15804741 | MS.gene93179:CDS |
| CCGAAGATTTCTGGAAGCAC+AGG | 0.532000 | 1.3:+15804653 | MS.gene93179:CDS |
| TTCCATACATGTATCTCAGA+AGG | 0.534119 | 1.3:-15804621 | None:intergenic |
| GTGGAGAAGCCAGTTCCATA+TGG | 0.542653 | 1.3:+15804356 | MS.gene93179:CDS |
| AGAGACTCACATTTAGAGGA+TGG | 0.543830 | 1.3:-15804074 | None:intergenic |
| CTGAAACACAGGAGAGGTTG+CGG | 0.553064 | 1.3:-15804518 | None:intergenic |
| CAGCTGCACAAGTTGAAGAA+AGG | 0.554405 | 1.3:+15804802 | MS.gene93179:CDS |
| GCCCTTCTGAGATACATGTA+TGG | 0.555410 | 1.3:+15804619 | MS.gene93179:CDS |
| CATTTAGAGGATGGATCTTG+AGG | 0.558322 | 1.3:-15804065 | None:intergenic |
| ACAAAACATGGGAGATTCGA+AGG | 0.560639 | 1.3:+15801116 | None:intergenic |
| AGTTCCATATGGCCATCTGA+TGG | 0.561027 | 1.3:+15804367 | MS.gene93179:CDS |
| AGATTTCTGGAAGCACAGGC+TGG | 0.562698 | 1.3:+15804657 | MS.gene93179:CDS |
| ACTCGGGAAATGTTCTCGAT+AGG | 0.565741 | 1.3:+15804758 | MS.gene93179:CDS |
| TAATGCCACAGTTCATGAAA+GGG | 0.567644 | 1.3:+15803960 | MS.gene93179:intron |
| GTAATGCCACAGTTCATGAA+AGG | 0.572992 | 1.3:+15803959 | MS.gene93179:intron |
| TGATGACTTTGTCTGGCCTG+TGG | 0.574666 | 1.3:+15803996 | MS.gene93179:CDS |
| CATCAATAATCAAGCGACCA+AGG | 0.591316 | 1.3:-15804029 | None:intergenic |
| CTTGTGCAGCTGGTACAACC+AGG | 0.594842 | 1.3:-15804791 | None:intergenic |
| CTACTTGAAGATCTTAACTC+GGG | 0.596940 | 1.3:+15804742 | MS.gene93179:CDS |
| CCAAGGAATGTAGTATCCAC+AGG | 0.598731 | 1.3:-15804012 | None:intergenic |
| CTCACCATTATAACCGCAGA+TGG | 0.600207 | 1.3:+15804466 | MS.gene93179:CDS |
| TGATCTCAAAGACGCATGCG+AGG | 0.608738 | 1.3:+15804714 | MS.gene93179:CDS |
| TGTTCTCGATAGGCTTAATG+AGG | 0.616503 | 1.3:+15804768 | MS.gene93179:CDS |
| TCTGATTTCTTGTAAGAACA+TGG | 0.619813 | 1.3:-15801186 | None:intergenic |
| TTCGCTGCTGTTGTGATACG+AGG | 0.621280 | 1.3:-15804542 | None:intergenic |
| AGGCCAGACAAAGTCATCAC+AGG | 0.625083 | 1.3:-15803992 | None:intergenic |
| AGAATGAAACGAGCAATAGG+AGG | 0.635724 | 1.3:-15801394 | None:intergenic |
| CTTCGTCAAGCATACGAGAG+AGG | 0.638028 | 1.3:-15804429 | None:intergenic |
| TCCATACATGTATCTCAGAA+GGG | 0.640688 | 1.3:-15804620 | None:intergenic |
| AGCCTTAAGTGTACCATCTG+CGG | 0.641897 | 1.3:-15804479 | None:intergenic |
| CATCTGCGGTTATAATGGTG+AGG | 0.675837 | 1.3:-15804465 | None:intergenic |
| GCAGCTAATAAATACGACAT+CGG | 0.699343 | 1.3:+15804691 | MS.gene93179:CDS |
| CGAGGCCTGAAACACAGGAG+AGG | 0.710966 | 1.3:-15804524 | None:intergenic |
| CATGTCACAAGAATCCTGCA+CGG | 0.721067 | 1.3:+15804597 | MS.gene93179:CDS |
| GGAAATGTAAAATTTGCGGG+AGG | 0.721522 | 1.3:-15801449 | None:intergenic |
| TGTTCCTTAGAAACACGCGA+AGG | 0.729696 | 1.3:-15801370 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATTATATGTCAATT+TGG | + | chr1.3:15801922-15801941 | MS.gene93179:intron | 10.0% |
| !! | AATTCTACTAATAAAATTCA+AGG | - | chr1.3:15801952-15801971 | None:intergenic | 15.0% |
| !! | ATAAAAAAAACTACAATGTT+GGG | - | chr1.3:15803634-15803653 | None:intergenic | 15.0% |
| !!! | ACTTATTTTTTGCAAATTTA+AGG | - | chr1.3:15803864-15803883 | None:intergenic | 15.0% |
| !!! | CTTTTGTTAATAAAAAGTTT+AGG | + | chr1.3:15801981-15802000 | MS.gene93179:intron | 15.0% |
| !! | AAATTTAGTAAACAAAAGAG+AGG | - | chr1.3:15803795-15803814 | None:intergenic | 20.0% |
| !! | AATTTAGTAAACAAAAGAGA+GGG | - | chr1.3:15803794-15803813 | None:intergenic | 20.0% |
| !! | ACAAATAGATAGTTATAGAA+CGG | - | chr1.3:15804190-15804209 | None:intergenic | 20.0% |
| !! | CTGATATTATAATCATCAAA+CGG | - | chr1.3:15801784-15801803 | None:intergenic | 20.0% |
| !! | GATAAAAAAAACTACAATGT+TGG | - | chr1.3:15803635-15803654 | None:intergenic | 20.0% |
| !! | GCTATATTTAAATAGAGAAT+TGG | + | chr1.3:15803557-15803576 | MS.gene93179:intron | 20.0% |
| !! | GTAAGATCTAAACAATATTA+TGG | - | chr1.3:15803252-15803271 | None:intergenic | 20.0% |
| !! | TGATGTAACTAGATATAATA+TGG | + | chr1.3:15804137-15804156 | MS.gene93179:intron | 20.0% |
| !!! | ATAAATTTTGAGAACTAGAT+TGG | + | chr1.3:15802593-15802612 | MS.gene93179:intron | 20.0% |
| !!! | ATTATGCTATGTTGAATTTT+TGG | + | chr1.3:15801265-15801284 | MS.gene93179:intron | 20.0% |
| !!! | TTATGCTATGTTGAATTTTT+GGG | + | chr1.3:15801266-15801285 | MS.gene93179:intron | 20.0% |
| ! | AAAAGGAAAGACAATAAAAC+AGG | - | chr1.3:15802641-15802660 | None:intergenic | 25.0% |
| ! | AATAAAAAGTTTAGGTGAGT+TGG | + | chr1.3:15801989-15802008 | MS.gene93179:intron | 25.0% |
| ! | AATGATAGTTTACTGAATGA+AGG | + | chr1.3:15802505-15802524 | MS.gene93179:intron | 25.0% |
| ! | AATTAAGGGTTCTTATTGTA+GGG | + | chr1.3:15802786-15802805 | MS.gene93179:intron | 25.0% |
| ! | ATAAAAAGTTTAGGTGAGTT+GGG | + | chr1.3:15801990-15802009 | MS.gene93179:intron | 25.0% |
| ! | ATAAATTAAGCTGCACATAA+AGG | + | chr1.3:15803319-15803338 | MS.gene93179:intron | 25.0% |
| ! | ATTATAATATCAGTTCGTCT+TGG | + | chr1.3:15801791-15801810 | MS.gene93179:intron | 25.0% |
| ! | ATTCAGTAAACTATCATTAG+TGG | - | chr1.3:15802503-15802522 | None:intergenic | 25.0% |
| ! | CAATGATCAAAATAGTGATT+CGG | - | chr1.3:15801562-15801581 | None:intergenic | 25.0% |
| ! | GATACATTGAAGAACTATTA+TGG | - | chr1.3:15801625-15801644 | None:intergenic | 25.0% |
| ! | GATTGTTAACATACAACAAT+AGG | - | chr1.3:15803038-15803057 | None:intergenic | 25.0% |
| ! | GTATTACAAAAAAATGCTTC+TGG | + | chr1.3:15803133-15803152 | MS.gene93179:intron | 25.0% |
| ! | TAAATTAAGCTGCACATAAA+GGG | + | chr1.3:15803320-15803339 | MS.gene93179:intron | 25.0% |
| ! | TAATTAAGGGTTCTTATTGT+AGG | + | chr1.3:15802785-15802804 | MS.gene93179:intron | 25.0% |
| ! | TATATCTATAAATCCAAGAC+AGG | - | chr1.3:15803757-15803776 | None:intergenic | 25.0% |
| ! | TGTACTGCAATCTTATATAT+AGG | + | chr1.3:15802309-15802328 | MS.gene93179:intron | 25.0% |
| ! | TTGAAATTTCGATACATTGA+GGG | + | chr1.3:15801710-15801729 | MS.gene93179:intron | 25.0% |
| !! | ACTTGTGATTTTCAGTTTAT+GGG | + | chr1.3:15802554-15802573 | MS.gene93179:intron | 25.0% |
| !! | TATTGAATGGAATGCATTTT+AGG | + | chr1.3:15802993-15803012 | MS.gene93179:intron | 25.0% |
| !! | TTTGAAATTTCGATACATTG+AGG | + | chr1.3:15801709-15801728 | MS.gene93179:intron | 25.0% |
| !! | TTTGCATTCTTGTTTGATTT+CGG | + | chr1.3:15804829-15804848 | MS.gene93179:CDS | 25.0% |
| !!! | AATCACTATTTTGATCATTG+GGG | + | chr1.3:15801562-15801581 | MS.gene93179:intron | 25.0% |
| !!! | ATTAGCTCTGTATTTATTGT+TGG | - | chr1.3:15803826-15803845 | None:intergenic | 25.0% |
| !!! | ATTGTTTTGAGTTACTTAAC+AGG | + | chr1.3:15804225-15804244 | MS.gene93179:intron | 25.0% |
| !!! | GAATCACTATTTTGATCATT+GGG | + | chr1.3:15801561-15801580 | MS.gene93179:intron | 25.0% |
| !!! | TGAATGAAGGTTTTTTATGA+CGG | + | chr1.3:15802518-15802537 | MS.gene93179:intron | 25.0% |
| !!! | TTTACTATGTTGTTGTTTTC+AGG | + | chr1.3:15801296-15801315 | MS.gene93179:intron | 25.0% |
| !!! | TTTAGATTATTTTTCCCCAT+TGG | + | chr1.3:15802820-15802839 | MS.gene93179:intron | 25.0% |
| AAACTTCTTAATACTACCTC+CGG | - | chr1.3:15802336-15802355 | None:intergenic | 30.0% | |
| AACATTATCCCTTTCAAACA+CGG | - | chr1.3:15802721-15802740 | None:intergenic | 30.0% | |
| AAGAGATAACATACTAACCA+GGG | - | chr1.3:15801474-15801493 | None:intergenic | 30.0% | |
| AAGTCTTAGTATCAAGCAAA+AGG | - | chr1.3:15802658-15802677 | None:intergenic | 30.0% | |
| AATTAGAGACTCACATTTAG+AGG | - | chr1.3:15804081-15804100 | None:intergenic | 30.0% | |
| ACAATTTAACACTAGTTCAG+AGG | - | chr1.3:15804295-15804314 | None:intergenic | 30.0% | |
| ACCAAAAAAAGAAGTTTCTG+CGG | + | chr1.3:15803655-15803674 | MS.gene93179:intron | 30.0% | |
| ACTAAGGAAATACTCAAGAA+GGG | + | chr1.3:15802864-15802883 | MS.gene93179:intron | 30.0% | |
| AGAGTAAAGTGCGATAATTA+AGG | + | chr1.3:15802771-15802790 | MS.gene93179:intron | 30.0% | |
| ATCCTACTAATAGCCAATAA+AGG | - | chr1.3:15802274-15802293 | None:intergenic | 30.0% | |
| ATTAAGAAGTTTAGGTGAGT+TGG | + | chr1.3:15802344-15802363 | MS.gene93179:intron | 30.0% | |
| ATTTCCTTAGTATCGTAGTA+AGG | - | chr1.3:15802855-15802874 | None:intergenic | 30.0% | |
| CTAACTCATCTTTACAAAAC+CGG | - | chr1.3:15801895-15801914 | None:intergenic | 30.0% | |
| GAGGTAGTATTAAGAAGTTT+AGG | + | chr1.3:15802336-15802355 | MS.gene93179:intron | 30.0% | |
| GAGTAAAGTGCGATAATTAA+GGG | + | chr1.3:15802772-15802791 | MS.gene93179:intron | 30.0% | |
| GTTTGAAAGGGATAATGTTT+GGG | + | chr1.3:15802722-15802741 | MS.gene93179:intron | 30.0% | |
| TAAGAGATAACATACTAACC+AGG | - | chr1.3:15801475-15801494 | None:intergenic | 30.0% | |
| TACTAAGGAAATACTCAAGA+AGG | + | chr1.3:15802863-15802882 | MS.gene93179:intron | 30.0% | |
| TACTAATAGCCAATAAAGGT+TGG | - | chr1.3:15802270-15802289 | None:intergenic | 30.0% | |
| TAGTAGGATTATTAGCAGTA+GGG | + | chr1.3:15802285-15802304 | MS.gene93179:intron | 30.0% | |
| TCACTAGATAGATCTACAAT+TGG | - | chr1.3:15803734-15803753 | None:intergenic | 30.0% | |
| TCCAAATACCAAGTTTGAAA+GGG | - | chr1.3:15801212-15801231 | None:intergenic | 30.0% | |
| TCTGATTTCTTGTAAGAACA+TGG | - | chr1.3:15801189-15801208 | None:intergenic | 30.0% | |
| TGCAATCTTATATATAGGAC+CGG | + | chr1.3:15802314-15802333 | MS.gene93179:intron | 30.0% | |
| TGTGCAGCTTAATTTATGTA+CGG | - | chr1.3:15803316-15803335 | None:intergenic | 30.0% | |
| TGTTTGAAAGGGATAATGTT+TGG | + | chr1.3:15802721-15802740 | MS.gene93179:intron | 30.0% | |
| TTAAGAAGTTTAGGTGAGTT+GGG | + | chr1.3:15802345-15802364 | MS.gene93179:intron | 30.0% | |
| TTAGTAGGATTATTAGCAGT+AGG | + | chr1.3:15802284-15802303 | MS.gene93179:intron | 30.0% | |
| TTCCAAATACCAAGTTTGAA+AGG | - | chr1.3:15801213-15801232 | None:intergenic | 30.0% | |
| TTTGAAAGGGATAATGTTTG+GGG | + | chr1.3:15802723-15802742 | MS.gene93179:intron | 30.0% | |
| ! | AACCTTTATTGGCTATTAGT+AGG | + | chr1.3:15802269-15802288 | MS.gene93179:intron | 30.0% |
| ! | CAAACGGATAATAGTCATTT+TGG | - | chr1.3:15801768-15801787 | None:intergenic | 30.0% |
| ! | CAATGGAAAATCGACAATTT+TGG | + | chr1.3:15801162-15801181 | MS.gene93179:CDS | 30.0% |
| ! | GACTTGTGATTTTCAGTTTA+TGG | + | chr1.3:15802553-15802572 | MS.gene93179:intron | 30.0% |
| !!! | CGAATCACTATTTTGATCAT+TGG | + | chr1.3:15801560-15801579 | MS.gene93179:intron | 30.0% |
| !!! | TTTTTTTTCCAACTGAGTCA+GGG | + | chr1.3:15804334-15804353 | MS.gene93179:intron | 30.0% |
| !!! | TTTTTTTTTCCAACTGAGTC+AGG | + | chr1.3:15804333-15804352 | MS.gene93179:intron | 30.0% |
| AAATCAGACCCTTTCAAACT+TGG | + | chr1.3:15801201-15801220 | MS.gene93179:CDS | 35.0% | |
| AACCTCTTGTGTGAAAACAA+GGG | - | chr1.3:15803418-15803437 | None:intergenic | 35.0% | |
| AATCTTATATATAGGACCGG+AGG | + | chr1.3:15802317-15802336 | MS.gene93179:intron | 35.0% | |
| AATTCCTTACCAACTGAGTT+GGG | + | chr1.3:15802114-15802133 | MS.gene93179:intron | 35.0% | |
| ACACTATCTTTCAACGATGT+AGG | - | chr1.3:15801828-15801847 | None:intergenic | 35.0% | |
| ACCCTTTCAAACTTGGTATT+TGG | + | chr1.3:15801208-15801227 | MS.gene93179:CDS | 35.0% | |
| AGAAGAAGAAGAAGCAGTAT+TGG | - | chr1.3:15801428-15801447 | None:intergenic | 35.0% | |
| AGAGATAACATACTAACCAG+GGG | - | chr1.3:15801473-15801492 | None:intergenic | 35.0% | |
| AGGGGAAATGTAAAATTTGC+GGG | - | chr1.3:15801455-15801474 | None:intergenic | 35.0% | |
| AGTAAGGACTAAAGAACCAA+TGG | - | chr1.3:15802839-15802858 | None:intergenic | 35.0% | |
| ATCTTTCACCTTACAAAAGC+CGG | + | chr1.3:15801873-15801892 | MS.gene93179:intron | 35.0% | |
| ATTTGTCGATAGAGAGAAAC+AGG | + | chr1.3:15801320-15801339 | MS.gene93179:CDS | 35.0% | |
| CAAAAAAATGCTTCTGGATC+TGG | + | chr1.3:15803139-15803158 | MS.gene93179:intron | 35.0% | |
| CAAGGGATACAATAATAAGC+AGG | - | chr1.3:15803209-15803228 | None:intergenic | 35.0% | |
| CAATAAAACCCGAAGATTTC+TGG | + | chr1.3:15804644-15804663 | MS.gene93179:CDS | 35.0% | |
| CAGGGGAAATGTAAAATTTG+CGG | - | chr1.3:15801456-15801475 | None:intergenic | 35.0% | |
| CAGTAAACTATCATTAGTGG+AGG | - | chr1.3:15802500-15802519 | None:intergenic | 35.0% | |
| CCTACTTGAAGATCTTAACT+CGG | + | chr1.3:15804741-15804760 | MS.gene93179:CDS | 35.0% | |
| CTACTTGAAGATCTTAACTC+GGG | + | chr1.3:15804742-15804761 | MS.gene93179:CDS | 35.0% | |
| GCAGCTAATAAATACGACAT+CGG | + | chr1.3:15804691-15804710 | MS.gene93179:CDS | 35.0% | |
| GTAAGGACTAAAGAACCAAT+GGG | - | chr1.3:15802838-15802857 | None:intergenic | 35.0% | |
| GTGCAGCTTAATTTATGTAC+GGG | - | chr1.3:15803315-15803334 | None:intergenic | 35.0% | |
| TAAGGACTAAAGAACCAATG+GGG | - | chr1.3:15802837-15802856 | None:intergenic | 35.0% | |
| TAATGCCACAGTTCATGAAA+GGG | + | chr1.3:15803960-15803979 | MS.gene93179:intron | 35.0% | |
| TAGTCCTTACTACGATACTA+AGG | + | chr1.3:15802848-15802867 | MS.gene93179:intron | 35.0% | |
| TCATACCTCTTAAACTGTTG+CGG | + | chr1.3:15802956-15802975 | MS.gene93179:intron | 35.0% | |
| TCCATACATGTATCTCAGAA+GGG | - | chr1.3:15804623-15804642 | None:intergenic | 35.0% | |
| TGCAGCTTAATTTATGTACG+GGG | - | chr1.3:15803508-15803527 | None:intergenic | 35.0% | |
| TTACTCTTTACTCACTTCAG+AGG | - | chr1.3:15802758-15802777 | None:intergenic | 35.0% | |
| TTCACCATACAATCTTGAAG+TGG | - | chr1.3:15803908-15803927 | None:intergenic | 35.0% | |
| TTCCATACATGTATCTCAGA+AGG | - | chr1.3:15804624-15804643 | None:intergenic | 35.0% | |
| TTGAAAGGGATAATGTTTGG+GGG | + | chr1.3:15802724-15802743 | MS.gene93179:intron | 35.0% | |
| TTGATCATTGGGGTAATAGT+CGG | + | chr1.3:15801572-15801591 | MS.gene93179:intron | 35.0% | |
| ! | ACAATCTAAATGATGACGTC+TGG | + | chr1.3:15803052-15803071 | MS.gene93179:intron | 35.0% |
| ! | AGTCAAAAAAGTGTGACACA+GGG | - | chr1.3:15801664-15801683 | None:intergenic | 35.0% |
| ! | ATCCATATACTCAGTTGGTA+AGG | - | chr1.3:15802476-15802495 | None:intergenic | 35.0% |
| ! | CGATTTTCCATTGAGCTAAT+CGG | - | chr1.3:15801155-15801174 | None:intergenic | 35.0% |
| ! | GATTTTCCATTGAGCTAATC+GGG | - | chr1.3:15801154-15801173 | None:intergenic | 35.0% |
| ! | TAGTCAAAAAAGTGTGACAC+AGG | - | chr1.3:15801665-15801684 | None:intergenic | 35.0% |
| ! | TCAAACTTGGTATTTGGAAC+TGG | + | chr1.3:15801214-15801233 | MS.gene93179:CDS | 35.0% |
| ! | TGATGACGTCTGGTAAATTA+CGG | + | chr1.3:15803062-15803081 | MS.gene93179:intron | 35.0% |
| !! | ACTTTGAGATTATTAGCTCG+TGG | - | chr1.3:15803598-15803617 | None:intergenic | 35.0% |
| !! | CACTTTGAAGTCTAAACAAG+CGG | - | chr1.3:15803696-15803715 | None:intergenic | 35.0% |
| !! | CGGTTTTGTAAAGATGAGTT+AGG | + | chr1.3:15801893-15801912 | MS.gene93179:intron | 35.0% |
| !! | TCCAGAAGAGACTGATTTTT+GGG | + | chr1.3:15802889-15802908 | MS.gene93179:intron | 35.0% |
| !! | TTACAAAACCGGCTTTTGTA+AGG | - | chr1.3:15801884-15801903 | None:intergenic | 35.0% |
| !! | TTCAAGAAGTGCTTACGATT+TGG | + | chr1.3:15804926-15804945 | MS.gene93179:CDS | 35.0% |
| !!! | ACCGCAGAAACTTCTTTTTT+TGG | - | chr1.3:15803659-15803678 | None:intergenic | 35.0% |
| AACGTGCGAATCTATTTGGT+GGG | - | chr1.3:15802188-15802207 | None:intergenic | 40.0% | |
| AAGGCTATACACCAAATGGT+GGG | - | chr1.3:15803394-15803413 | None:intergenic | 40.0% | |
| ACCCAAAAATCAGTCTCTTC+TGG | - | chr1.3:15802893-15802912 | None:intergenic | 40.0% | |
| AGAATGAAACGAGCAATAGG+AGG | - | chr1.3:15801397-15801416 | None:intergenic | 40.0% | |
| AGAGACTCACATTTAGAGGA+TGG | - | chr1.3:15804077-15804096 | None:intergenic | 40.0% | |
| AGTTGGACTCATATACGCAA+GGG | - | chr1.3:15802233-15802252 | None:intergenic | 40.0% | |
| ATCGAGAGTTAGAGGAAATG+AGG | - | chr1.3:15802698-15802717 | None:intergenic | 40.0% | |
| ATCTATCTAGTGACCTGTCT+TGG | + | chr1.3:15803741-15803760 | MS.gene93179:intron | 40.0% | |
| ATTCATATTCCACAAGAGCG+TGG | - | chr1.3:15802092-15802111 | None:intergenic | 40.0% | |
| CAACACTCAAGTTTCGTATC+AGG | + | chr1.3:15803271-15803290 | MS.gene93179:intron | 40.0% | |
| CAACCTCTTGTGTGAAAACA+AGG | - | chr1.3:15803419-15803438 | None:intergenic | 40.0% | |
| CAATTCCTTACCAACTGAGT+TGG | + | chr1.3:15802113-15802132 | MS.gene93179:intron | 40.0% | |
| CATCAAAGAGATTCTCATGC+GGG | + | chr1.3:15802406-15802425 | MS.gene93179:intron | 40.0% | |
| CATCAATAATCAAGCGACCA+AGG | - | chr1.3:15804032-15804051 | None:intergenic | 40.0% | |
| CATTTAGAGGATGGATCTTG+AGG | - | chr1.3:15804068-15804087 | None:intergenic | 40.0% | |
| CCATCAAAGAGATTCTCATG+CGG | + | chr1.3:15802405-15802424 | MS.gene93179:intron | 40.0% | |
| CCGAGTTAAGATCTTCAAGT+AGG | - | chr1.3:15804744-15804763 | None:intergenic | 40.0% | |
| CGAAGAATGAAACGAGCAAT+AGG | - | chr1.3:15801400-15801419 | None:intergenic | 40.0% | |
| CGCATGAGAATCTCTTTGAT+GGG | - | chr1.3:15802407-15802426 | None:intergenic | 40.0% | |
| CTCCTTACCAACTGAGTATA+TGG | + | chr1.3:15802471-15802490 | MS.gene93179:intron | 40.0% | |
| CTTGTGACATGTCTTCTATG+TGG | - | chr1.3:15804588-15804607 | None:intergenic | 40.0% | |
| CTTGTGTGAAAACAAGGGTA+AGG | - | chr1.3:15803413-15803432 | None:intergenic | 40.0% | |
| GAGGAATCCATATACTCAGT+TGG | - | chr1.3:15802481-15802500 | None:intergenic | 40.0% | |
| GATACATTGAGGGACTATTG+TGG | + | chr1.3:15801720-15801739 | MS.gene93179:intron | 40.0% | |
| GATGACGTCTGGTAAATTAC+GGG | + | chr1.3:15803063-15803082 | MS.gene93179:intron | 40.0% | |
| GGAAATGTAAAATTTGCGGG+AGG | - | chr1.3:15801452-15801471 | None:intergenic | 40.0% | |
| GTAATGCCACAGTTCATGAA+AGG | + | chr1.3:15803959-15803978 | MS.gene93179:intron | 40.0% | |
| GTATGGTGAAATGCTGATAG+AGG | + | chr1.3:15803918-15803937 | MS.gene93179:intron | 40.0% | |
| GTTTCTGCGGTAAACTCATA+TGG | + | chr1.3:15803668-15803687 | MS.gene93179:intron | 40.0% | |
| TAAGGCTATACACCAAATGG+TGG | - | chr1.3:15803395-15803414 | None:intergenic | 40.0% | |
| TCATGAACTGTGGCATTACA+GGG | - | chr1.3:15803958-15803977 | None:intergenic | 40.0% | |
| TCTTTCAACGATGTAGGACT+TGG | - | chr1.3:15801822-15801841 | None:intergenic | 40.0% | |
| TGAAAGGGATAATGTTTGGG+GGG | + | chr1.3:15802725-15802744 | MS.gene93179:intron | 40.0% | |
| TGTACCATCTGCGGTTATAA+TGG | - | chr1.3:15804473-15804492 | None:intergenic | 40.0% | |
| TGTCAACGTGCGAATCTATT+TGG | - | chr1.3:15802192-15802211 | None:intergenic | 40.0% | |
| TGTTCTCGATAGGCTTAATG+AGG | + | chr1.3:15804768-15804787 | MS.gene93179:CDS | 40.0% | |
| TTCATGAACTGTGGCATTAC+AGG | - | chr1.3:15803959-15803978 | None:intergenic | 40.0% | |
| TTTCGTATCAGGAAACATGC+AGG | + | chr1.3:15803282-15803301 | MS.gene93179:intron | 40.0% | |
| ! | CAATTTCCCGATTAGCTCAA+TGG | + | chr1.3:15801145-15801164 | MS.gene93179:CDS | 40.0% |
| ! | CGCAAATTTTACATTTCCCC+TGG | + | chr1.3:15801454-15801473 | MS.gene93179:CDS | 40.0% |
| ! | GAATCTCTTTGATGGGTGAT+CGG | - | chr1.3:15802400-15802419 | None:intergenic | 40.0% |
| ! | GAATGCAGTTTTCCATCAGA+TGG | - | chr1.3:15804382-15804401 | None:intergenic | 40.0% |
| ! | TGGCTACTTGTTACACATTG+AGG | + | chr1.3:15801740-15801759 | MS.gene93179:intron | 40.0% |
| ! | TTCATATTCCACAAGAGCGT+GGG | - | chr1.3:15802091-15802110 | None:intergenic | 40.0% |
| ! | TTTAGGTGAGTTGGGTTCTA+GGG | + | chr1.3:15802353-15802372 | MS.gene93179:intron | 40.0% |
| ! | TTTTCCATCAGATGGCCATA+TGG | - | chr1.3:15804374-15804393 | None:intergenic | 40.0% |
| !! | AGAAGAGACTGATTTTTGGG+TGG | + | chr1.3:15802892-15802911 | MS.gene93179:intron | 40.0% |
| !! | AGTGCCACTTCAAGATTGTA+TGG | + | chr1.3:15803901-15803920 | MS.gene93179:intron | 40.0% |
| !! | ATACTCAGTTGGTAAGGAGT+TGG | - | chr1.3:15802470-15802489 | None:intergenic | 40.0% |
| !! | CAACTCAGTTGGTAAGGAAT+TGG | - | chr1.3:15802115-15802134 | None:intergenic | 40.0% |
| !! | GGGAAAAGAGAGGTATTGAA+TGG | + | chr1.3:15802980-15802999 | MS.gene93179:intron | 40.0% |
| !! | GTCCAGAAGAGACTGATTTT+TGG | + | chr1.3:15802888-15802907 | MS.gene93179:intron | 40.0% |
| !!! | AAGAGACTGATTTTTGGGTG+GGG | + | chr1.3:15802894-15802913 | MS.gene93179:intron | 40.0% |
| !!! | GAAGAGACTGATTTTTGGGT+GGG | + | chr1.3:15802893-15802912 | MS.gene93179:intron | 40.0% |
| !!! | TACCCTTGTTTTCACACAAG+AGG | + | chr1.3:15803413-15803432 | MS.gene93179:intron | 40.0% |
| !!! | TGTTTTTTCGTCATGCAGAC+CGG | + | chr1.3:15804884-15804903 | MS.gene93179:CDS | 40.0% |
| AAACACGGATCGAGAGTTAG+AGG | - | chr1.3:15802706-15802725 | None:intergenic | 45.0% | |
| AACCGCAGATGGTACACTTA+AGG | + | chr1.3:15804477-15804496 | MS.gene93179:CDS | 45.0% | |
| AAGCACCCTTTCATGAACTG+TGG | - | chr1.3:15803968-15803987 | None:intergenic | 45.0% | |
| ACAACTTTACTGTTGCGCCA+AGG | + | chr1.3:15803479-15803498 | MS.gene93179:intron | 45.0% | |
| ACCTCTTAAACTGTTGCGGA+GGG | + | chr1.3:15802960-15802979 | MS.gene93179:intron | 45.0% | |
| ACTCGGGAAATGTTCTCGAT+AGG | + | chr1.3:15804758-15804777 | MS.gene93179:CDS | 45.0% | |
| ACTCTCGATCCGTGTTTGAA+AGG | + | chr1.3:15802709-15802728 | MS.gene93179:intron | 45.0% | |
| AGATTCGCACGTTGACAACA+CGG | + | chr1.3:15802195-15802214 | MS.gene93179:intron | 45.0% | |
| AGCCTTAAGTGTACCATCTG+CGG | - | chr1.3:15804482-15804501 | None:intergenic | 45.0% | |
| AGGATTCGTCAGATGATGCA+GGG | - | chr1.3:15803189-15803208 | None:intergenic | 45.0% | |
| AGTTCCATATGGCCATCTGA+TGG | + | chr1.3:15804367-15804386 | MS.gene93179:CDS | 45.0% | |
| ATCAGATGGCCATATGGAAC+TGG | - | chr1.3:15804368-15804387 | None:intergenic | 45.0% | |
| ATTATTGTATCCCTTGCCCC+AGG | + | chr1.3:15803213-15803232 | MS.gene93179:intron | 45.0% | |
| ATTTATGTACGGGGAAGCCT+TGG | - | chr1.3:15803499-15803518 | None:intergenic | 45.0% | |
| CAACAAAGAGATTCACACGC+GGG | + | chr1.3:15802051-15802070 | MS.gene93179:intron | 45.0% | |
| CAACGTGCGAATCTATTTGG+TGG | - | chr1.3:15802189-15802208 | None:intergenic | 45.0% | |
| CATCTGCGGTTATAATGGTG+AGG | - | chr1.3:15804468-15804487 | None:intergenic | 45.0% | |
| CATGTCACAAGAATCCTGCA+CGG | + | chr1.3:15804597-15804616 | MS.gene93179:CDS | 45.0% | |
| CATTGGGGTAATAGTCGGTT+TGG | + | chr1.3:15801577-15801596 | MS.gene93179:intron | 45.0% | |
| CCAACAAAGAGATTCACACG+CGG | + | chr1.3:15802050-15802069 | MS.gene93179:intron | 45.0% | |
| CCAACTGAGCCAACCTTTAT+TGG | + | chr1.3:15802258-15802277 | MS.gene93179:intron | 45.0% | |
| CCAAGGAATGTAGTATCCAC+AGG | - | chr1.3:15804015-15804034 | None:intergenic | 45.0% | |
| CCGCATGAGAATCTCTTTGA+TGG | - | chr1.3:15802408-15802427 | None:intergenic | 45.0% | |
| CCTGTGCTTCCAGAAATCTT+CGG | - | chr1.3:15804656-15804675 | None:intergenic | 45.0% | |
| CCTGTGGATACTACATTCCT+TGG | + | chr1.3:15804012-15804031 | MS.gene93179:CDS | 45.0% | |
| CGCGTGTGAATCTCTTTGTT+GGG | - | chr1.3:15802052-15802071 | None:intergenic | 45.0% | |
| CTCACCATTATAACCGCAGA+TGG | + | chr1.3:15804466-15804485 | MS.gene93179:CDS | 45.0% | |
| CTCTCGATCCGTGTTTGAAA+GGG | + | chr1.3:15802710-15802729 | MS.gene93179:intron | 45.0% | |
| CTGTGCTTCCAGAAATCTTC+GGG | - | chr1.3:15804655-15804674 | None:intergenic | 45.0% | |
| CTTTCTTCAACTTGTGCAGC+TGG | - | chr1.3:15804804-15804823 | None:intergenic | 45.0% | |
| GAACCTGTGATGACTTTGTC+TGG | + | chr1.3:15803989-15804008 | MS.gene93179:CDS | 45.0% | |
| GAGTTGGACTCATATACGCA+AGG | - | chr1.3:15802234-15802253 | None:intergenic | 45.0% | |
| GGCTCCTTGTTACACATTCA+CGG | - | chr1.3:15801604-15801623 | None:intergenic | 45.0% | |
| GGGTAAGGCTATACACCAAA+TGG | - | chr1.3:15803398-15803417 | None:intergenic | 45.0% | |
| GTCACGTGACTGAAAGGTTA+CGG | - | chr1.3:15803458-15803477 | None:intergenic | 45.0% | |
| GTTGTTGTCACGTGACTGAA+AGG | - | chr1.3:15803464-15803483 | None:intergenic | 45.0% | |
| TACCTCTTAAACTGTTGCGG+AGG | + | chr1.3:15802959-15802978 | MS.gene93179:intron | 45.0% | |
| TAGGGCTAACTAGGGGTTAA+GGG | + | chr1.3:15802371-15802390 | MS.gene93179:intron | 45.0% | |
| TCACGTGACTGAAAGGTTAC+GGG | - | chr1.3:15803457-15803476 | None:intergenic | 45.0% | |
| TGGTCCGTGAATGTGTAACA+AGG | + | chr1.3:15801597-15801616 | MS.gene93179:intron | 45.0% | |
| TGTTCCTTAGAAACACGCGA+AGG | - | chr1.3:15801373-15801392 | None:intergenic | 45.0% | |
| TTAGAAACACGCGAAGGTTC+AGG | - | chr1.3:15801367-15801386 | None:intergenic | 45.0% | |
| ! | AAAGGTTGGCTCAGTTGGTA+AGG | - | chr1.3:15802256-15802275 | None:intergenic | 45.0% |
| ! | AGTTTAGGTGAGTTGGGTTC+CGG | + | chr1.3:15801996-15802015 | MS.gene93179:intron | 45.0% |
| ! | CAGCTGCACAAGTTGAAGAA+AGG | + | chr1.3:15804802-15804821 | MS.gene93179:CDS | 45.0% |
| ! | CCAATAAAGGTTGGCTCAGT+TGG | - | chr1.3:15802261-15802280 | None:intergenic | 45.0% |
| ! | GTTTAGGTGAGTTGGGTTCT+AGG | + | chr1.3:15802352-15802371 | MS.gene93179:intron | 45.0% |
| ! | TCACACAAGAGGTTGTTTCC+AGG | + | chr1.3:15803424-15803443 | MS.gene93179:intron | 45.0% |
| ! | TGAACCTTCGCGTGTTTCTA+AGG | + | chr1.3:15801366-15801385 | MS.gene93179:CDS | 45.0% |
| ! | TTTTTCCAACTGAGTCAGGG+TGG | + | chr1.3:15804337-15804356 | MS.gene93179:intron | 45.0% |
| !! | GCCCTTCTGAGATACATGTA+TGG | + | chr1.3:15804619-15804638 | MS.gene93179:CDS | 45.0% |
| !! | TTGGGTTCTAGGGCTAACTA+GGG | + | chr1.3:15802363-15802382 | MS.gene93179:intron | 45.0% |
| !!! | GTTTTTTCGTCATGCAGACC+GGG | + | chr1.3:15804885-15804904 | MS.gene93179:CDS | 45.0% |
| AAGGTTACGGGTTCAAGTCC+TGG | - | chr1.3:15803445-15803464 | None:intergenic | 50.0% | |
| ACGACAGTGAATGCAGATGC+AGG | - | chr1.3:15803101-15803120 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATATGC+AGG | + | chr1.3:15803354-15803373 | MS.gene93179:intron | 50.0% | |
| ACTAGTTCAGAGGTTCGCTG+AGG | - | chr1.3:15804285-15804304 | None:intergenic | 50.0% | |
| AGGCCAGACAAAGTCATCAC+AGG | - | chr1.3:15803995-15804014 | None:intergenic | 50.0% | |
| AGTTGGATTCACATCCCGCA+AGG | - | chr1.3:15802453-15802472 | None:intergenic | 50.0% | |
| CAGGATTCGTCAGATGATGC+AGG | - | chr1.3:15803190-15803209 | None:intergenic | 50.0% | |
| CCGCGTGTGAATCTCTTTGT+TGG | - | chr1.3:15802053-15802072 | None:intergenic | 50.0% | |
| CTAAAGCTCCCGCATATGCA+GGG | + | chr1.3:15803355-15803374 | MS.gene93179:intron | 50.0% | |
| CTAGGGCTAACTAGGGGTTA+AGG | + | chr1.3:15802370-15802389 | MS.gene93179:intron | 50.0% | |
| CTAGTTCAGAGGTTCGCTGA+GGG | - | chr1.3:15804284-15804303 | None:intergenic | 50.0% | |
| CTGAAACACAGGAGAGGTTG+CGG | - | chr1.3:15804521-15804540 | None:intergenic | 50.0% | |
| CTTCGTCAAGCATACGAGAG+AGG | - | chr1.3:15804432-15804451 | None:intergenic | 50.0% | |
| GATTCGCACGTTGACAACAC+GGG | + | chr1.3:15802196-15802215 | MS.gene93179:intron | 50.0% | |
| GTGGAGAAGCCAGTTCCATA+TGG | + | chr1.3:15804356-15804375 | MS.gene93179:CDS | 50.0% | |
| GTTGGATTCACATCCCGCAA+GGG | - | chr1.3:15802452-15802471 | None:intergenic | 50.0% | |
| TCCCTCCGCAACAGTTTAAG+AGG | - | chr1.3:15802964-15802983 | None:intergenic | 50.0% | |
| TCGATAGGCTTAATGAGGCC+TGG | + | chr1.3:15804773-15804792 | MS.gene93179:CDS | 50.0% | |
| TGATACGAGGCCTGAAACAC+AGG | - | chr1.3:15804532-15804551 | None:intergenic | 50.0% | |
| TGATCTCAAAGACGCATGCG+AGG | + | chr1.3:15804714-15804733 | MS.gene93179:CDS | 50.0% | |
| TGATGACTTTGTCTGGCCTG+TGG | + | chr1.3:15803996-15804015 | MS.gene93179:CDS | 50.0% | |
| TTCGCTGCTGTTGTGATACG+AGG | - | chr1.3:15804545-15804564 | None:intergenic | 50.0% | |
| ! | ACTCATATACGCAAGGGCGT+TGG | - | chr1.3:15802227-15802246 | None:intergenic | 50.0% |
| ! | AGATTTCTGGAAGCACAGGC+TGG | + | chr1.3:15804657-15804676 | MS.gene93179:CDS | 50.0% |
| ! | CAAGCATACGAGAGAGGCAT+CGG | - | chr1.3:15804426-15804445 | None:intergenic | 50.0% |
| ! | CCGAAGATTTCTGGAAGCAC+AGG | + | chr1.3:15804653-15804672 | MS.gene93179:CDS | 50.0% |
| ! | GAAGCCCAACTCAGTTGGTA+AGG | - | chr1.3:15802121-15802140 | None:intergenic | 50.0% |
| ! | GTTTAGGTGAGTTGGGTTCC+GGG | + | chr1.3:15801997-15802016 | MS.gene93179:intron | 50.0% |
| ! | TTTAGGTGAGTTGGGTTCCG+GGG | + | chr1.3:15801998-15802017 | MS.gene93179:intron | 50.0% |
| !! | GTTGGGTTCTAGGGCTAACT+AGG | + | chr1.3:15802362-15802381 | MS.gene93179:intron | 50.0% |
| !! | TGGCTCAGTTGGTAAGGAGT+TGG | - | chr1.3:15802250-15802269 | None:intergenic | 50.0% |
| !! | TGGGTTCTAGGGCTAACTAG+GGG | + | chr1.3:15802364-15802383 | MS.gene93179:intron | 50.0% |
| AAGCACAGGCTGGCATTGCT+TGG | + | chr1.3:15804667-15804686 | MS.gene93179:CDS | 55.0% | |
| ACATCTCCAGCATGAGCTCC+CGG | - | chr1.3:15804906-15804925 | None:intergenic | 55.0% | |
| CATATGCAGGGTTCGGGAAG+GGG | + | chr1.3:15803367-15803386 | MS.gene93179:intron | 55.0% | |
| CGCAACCTCTCCTGTGTTTC+AGG | + | chr1.3:15804519-15804538 | MS.gene93179:CDS | 55.0% | |
| CTGTTGCGGAGGGAAAAGAG+AGG | + | chr1.3:15802970-15802989 | MS.gene93179:intron | 55.0% | |
| CTTCCCGAACCCTGCATATG+CGG | - | chr1.3:15803367-15803386 | None:intergenic | 55.0% | |
| CTTCTCCACCCTGACTCAGT+TGG | - | chr1.3:15804345-15804364 | None:intergenic | 55.0% | |
| CTTGTGCAGCTGGTACAACC+AGG | - | chr1.3:15804794-15804813 | None:intergenic | 55.0% | |
| GAGTTGTACCCACGCTCTTG+TGG | + | chr1.3:15802080-15802099 | MS.gene93179:intron | 55.0% | |
| GCATATGCAGGGTTCGGGAA+GGG | + | chr1.3:15803366-15803385 | MS.gene93179:intron | 55.0% | |
| TTCCCGAACCCTGCATATGC+GGG | - | chr1.3:15803366-15803385 | None:intergenic | 55.0% | |
| ! | ACCAACTGAGTTGGGCTTCG+AGG | + | chr1.3:15802122-15802141 | MS.gene93179:intron | 55.0% |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr1.3:15803350-15803369 | None:intergenic | 55.0% |
| ! | TTGGGTTCCGGGGTTGACTT+GGG | + | chr1.3:15802008-15802027 | MS.gene93179:intron | 55.0% |
| AAGTTGTGCCCACGCCCTTG+CGG | + | chr1.3:15802435-15802454 | MS.gene93179:intron | 60.0% | |
| ATGGCTATCCCCTGCTGCCT+GGG | - | chr1.3:15803233-15803252 | None:intergenic | 60.0% | |
| ATTCACATCCCGCAAGGGCG+TGG | - | chr1.3:15802447-15802466 | None:intergenic | 60.0% | |
| CCTTGACCCCAAGTCAACCC+CGG | - | chr1.3:15802018-15802037 | None:intergenic | 60.0% | |
| CGAGGCCTGAAACACAGGAG+AGG | - | chr1.3:15804527-15804546 | None:intergenic | 60.0% | |
| CGCATATGCAGGGTTCGGGA+AGG | + | chr1.3:15803365-15803384 | MS.gene93179:intron | 60.0% | |
| CTCCCGCATATGCAGGGTTC+GGG | + | chr1.3:15803361-15803380 | MS.gene93179:intron | 60.0% | |
| GCCTCGAAGCCCAACTCAGT+TGG | - | chr1.3:15802126-15802145 | None:intergenic | 60.0% | |
| GCTCCCGCATATGCAGGGTT+CGG | + | chr1.3:15803360-15803379 | MS.gene93179:intron | 60.0% | |
| GCTGCACATAAAGGGCAGCC+CGG | + | chr1.3:15803328-15803347 | MS.gene93179:intron | 60.0% | |
| GTATCTCAGAAGGGCCGTGC+AGG | - | chr1.3:15804614-15804633 | None:intergenic | 60.0% | |
| GTTGGGTTCCGGGGTTGACT+TGG | + | chr1.3:15802007-15802026 | MS.gene93179:intron | 60.0% | |
| TATGGCTATCCCCTGCTGCC+TGG | - | chr1.3:15803234-15803253 | None:intergenic | 60.0% | |
| ! | ACTGAGTTGGGCTTCGAGGC+TGG | + | chr1.3:15802126-15802145 | MS.gene93179:intron | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr1.3:15803349-15803368 | None:intergenic | 60.0% |
| ! | TTCACATCCCGCAAGGGCGT+GGG | - | chr1.3:15802446-15802465 | None:intergenic | 60.0% |
| ! | TTGGGCTTCGAGGCTGGCTA+GGG | + | chr1.3:15802132-15802151 | MS.gene93179:intron | 60.0% |
| !! | TGGGTTCCGGGGTTGACTTG+GGG | + | chr1.3:15802009-15802028 | MS.gene93179:intron | 60.0% |
| AGTTGTGCCCACGCCCTTGC+GGG | + | chr1.3:15802436-15802455 | MS.gene93179:intron | 65.0% | |
| ATCCCTTGCCCCAGGCAGCA+GGG | + | chr1.3:15803221-15803240 | MS.gene93179:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr1.3:15803380-15803399 | MS.gene93179:intron | 65.0% | |
| TATCCCTTGCCCCAGGCAGC+AGG | + | chr1.3:15803220-15803239 | MS.gene93179:intron | 65.0% | |
| TGCAGACCGGGAGCTCATGC+TGG | + | chr1.3:15804897-15804916 | MS.gene93179:CDS | 65.0% | |
| TGGCTATCCCCTGCTGCCTG+GGG | - | chr1.3:15803232-15803251 | None:intergenic | 65.0% | |
| ! | GGCTGGCTAGGGGTCAAGAC+AGG | + | chr1.3:15802143-15802162 | MS.gene93179:intron | 65.0% |
| ! | GTTGGGCTTCGAGGCTGGCT+AGG | + | chr1.3:15802131-15802150 | MS.gene93179:intron | 65.0% |
| ! | TGGGCTTCGAGGCTGGCTAG+GGG | + | chr1.3:15802133-15802152 | MS.gene93179:intron | 65.0% |
| !! | CCGGGGTTGACTTGGGGTCA+AGG | + | chr1.3:15802015-15802034 | MS.gene93179:intron | 65.0% |
| ATCCCCTGCTGCCTGGGGCA+AGG | - | chr1.3:15803227-15803246 | None:intergenic | 70.0% | |
| TCCCCTGCTGCCTGGGGCAA+GGG | - | chr1.3:15803226-15803245 | None:intergenic | 70.0% | |
| TCCCTTGCCCCAGGCAGCAG+GGG | + | chr1.3:15803222-15803241 | MS.gene93179:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 15801123 | 15804954 | 15801123 | ID=MS.gene93179 |
| chr1.3 | mRNA | 15801123 | 15804954 | 15801123 | ID=MS.gene93179.t1;Parent=MS.gene93179 |
| chr1.3 | exon | 15801123 | 15801235 | 15801123 | ID=MS.gene93179.t1.exon1;Parent=MS.gene93179.t1 |
| chr1.3 | CDS | 15801123 | 15801235 | 15801123 | ID=cds.MS.gene93179.t1;Parent=MS.gene93179.t1 |
| chr1.3 | exon | 15801318 | 15801475 | 15801318 | ID=MS.gene93179.t1.exon2;Parent=MS.gene93179.t1 |
| chr1.3 | CDS | 15801318 | 15801475 | 15801318 | ID=cds.MS.gene93179.t1;Parent=MS.gene93179.t1 |
| chr1.3 | exon | 15803971 | 15804086 | 15803971 | ID=MS.gene93179.t1.exon3;Parent=MS.gene93179.t1 |
| chr1.3 | CDS | 15803971 | 15804086 | 15803971 | ID=cds.MS.gene93179.t1;Parent=MS.gene93179.t1 |
| chr1.3 | exon | 15804355 | 15804954 | 15804355 | ID=MS.gene93179.t1.exon4;Parent=MS.gene93179.t1 |
| chr1.3 | CDS | 15804355 | 15804954 | 15804355 | ID=cds.MS.gene93179.t1;Parent=MS.gene93179.t1 |
| Gene Sequence |
| Protein sequence |
