Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93372.t1 | XP_003604555.1 | 95.4 | 218 | 7 | 1 | 1 | 218 | 1 | 215 | 1.20E-106 | 396 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93372.t1 | O80920 | 67.1 | 173 | 53 | 2 | 47 | 218 | 37 | 206 | 1.1e-60 | 234.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93372.t1 | G7JKP6 | 95.4 | 218 | 7 | 1 | 1 | 218 | 1 | 215 | 8.3e-107 | 396.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052795 | MS.gene93372 | 0.897313 | 1.59E-76 | -1.69E-46 |
| MS.gene054810 | MS.gene93372 | 0.821375 | 4.18E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93372.t1 | MTR_4g014460 | 95.413 | 218 | 7 | 1 | 1 | 218 | 1 | 215 | 1.12e-152 | 422 |
| MS.gene93372.t1 | MTR_7g070050 | 65.775 | 187 | 56 | 3 | 36 | 215 | 1 | 186 | 1.07e-76 | 229 |
| MS.gene93372.t1 | MTR_5g083270 | 62.941 | 170 | 58 | 3 | 42 | 209 | 39 | 205 | 3.39e-70 | 213 |
| MS.gene93372.t1 | MTR_3g071740 | 61.988 | 171 | 60 | 4 | 47 | 216 | 64 | 230 | 5.08e-69 | 211 |
| MS.gene93372.t1 | MTR_5g030500 | 53.659 | 164 | 72 | 2 | 49 | 208 | 44 | 207 | 6.91e-55 | 174 |
| MS.gene93372.t1 | MTR_1g028380 | 48.485 | 165 | 84 | 1 | 49 | 213 | 19 | 182 | 9.78e-55 | 173 |
| MS.gene93372.t1 | MTR_8g027805 | 47.879 | 165 | 85 | 1 | 49 | 213 | 18 | 181 | 4.54e-54 | 171 |
| MS.gene93372.t1 | MTR_1g016480 | 52.500 | 160 | 72 | 3 | 49 | 206 | 39 | 196 | 4.12e-53 | 170 |
| MS.gene93372.t1 | MTR_3g090980 | 43.956 | 182 | 97 | 2 | 32 | 213 | 8 | 184 | 1.37e-52 | 168 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93372.t1 | AT2G38310 | 67.052 | 173 | 53 | 2 | 47 | 218 | 37 | 206 | 5.37e-73 | 220 |
| MS.gene93372.t1 | AT5G05440 | 64.815 | 162 | 53 | 2 | 45 | 205 | 41 | 199 | 2.89e-70 | 213 |
| MS.gene93372.t1 | AT2G40330 | 59.064 | 171 | 65 | 3 | 45 | 211 | 44 | 213 | 3.96e-66 | 203 |
| MS.gene93372.t1 | AT5G53160 | 48.485 | 165 | 84 | 1 | 49 | 213 | 19 | 182 | 4.28e-56 | 177 |
| MS.gene93372.t1 | AT1G01360 | 47.531 | 162 | 84 | 1 | 52 | 213 | 24 | 184 | 1.82e-55 | 175 |
| MS.gene93372.t1 | AT2G26040 | 49.398 | 166 | 82 | 1 | 43 | 206 | 16 | 181 | 1.39e-53 | 170 |
| MS.gene93372.t1 | AT4G01026 | 49.068 | 161 | 81 | 1 | 53 | 213 | 27 | 186 | 1.43e-53 | 171 |
| MS.gene93372.t1 | AT4G27920 | 46.667 | 165 | 88 | 0 | 49 | 213 | 14 | 178 | 6.78e-52 | 166 |
| MS.gene93372.t1 | AT4G17870 | 48.810 | 168 | 85 | 1 | 45 | 211 | 13 | 180 | 8.03e-52 | 166 |
| MS.gene93372.t1 | AT1G73000 | 46.199 | 171 | 82 | 4 | 43 | 203 | 31 | 201 | 3.59e-44 | 147 |
| MS.gene93372.t1 | AT5G46790 | 49.412 | 170 | 80 | 3 | 45 | 209 | 40 | 208 | 1.07e-43 | 146 |
| MS.gene93372.t1 | AT5G46790 | 49.412 | 170 | 80 | 3 | 45 | 209 | 40 | 208 | 1.07e-43 | 146 |
| MS.gene93372.t1 | AT5G45860 | 52.055 | 146 | 69 | 1 | 64 | 209 | 12 | 156 | 3.99e-42 | 140 |
| MS.gene93372.t1 | AT5G45870 | 50.676 | 148 | 71 | 1 | 64 | 211 | 12 | 157 | 1.03e-41 | 139 |
| MS.gene93372.t1 | AT4G18620 | 45.963 | 161 | 80 | 2 | 58 | 211 | 4 | 164 | 2.35e-34 | 120 |
| MS.gene93372.t1 | AT5G53160 | 50.495 | 101 | 49 | 1 | 49 | 149 | 19 | 118 | 6.57e-32 | 114 |
Find 72 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGAAGACTTTGGTGGATT+TGG | 0.227133 | 4.1:-81620822 | None:intergenic |
| CGTTCGGTGCTGCGTGCAGC+AGG | 0.323719 | 4.1:-81621170 | None:intergenic |
| GGACGACCGCCGAGCATAAT+TGG | 0.334740 | 4.1:-81620995 | None:intergenic |
| TGATAGTGGGCTATAGTATT+AGG | 0.336898 | 4.1:-81620951 | None:intergenic |
| CAGCAGGGAGGCCAGATATA+AGG | 0.373259 | 4.1:-81621154 | None:intergenic |
| TTAGGAATGGTGTTGGTGAC+AGG | 0.377606 | 4.1:-81620933 | None:intergenic |
| TGATGGAGGCGGTTGTCTCT+TGG | 0.388404 | 4.1:-81621016 | None:intergenic |
| TCCACAGAGGGTGACTGTTC+CGG | 0.392902 | 4.1:+81621293 | MS.gene93372:CDS |
| AGGGAGGTCAACCTTATATC+TGG | 0.399072 | 4.1:+81621143 | MS.gene93372:CDS |
| CACTGACCAAACGGCGGTGA+TGG | 0.428126 | 4.1:-81621033 | None:intergenic |
| ATATTGAGTGTGTGTGATAG+TGG | 0.451535 | 4.1:-81620965 | None:intergenic |
| GAAGACTTTGGTGGATTTGG+AGG | 0.457214 | 4.1:-81620819 | None:intergenic |
| CCGCCTCCATCACCGCCGTT+TGG | 0.479222 | 4.1:+81621027 | MS.gene93372:CDS |
| ATCGAGGATCTCAAGGCGTT+CGG | 0.483659 | 4.1:-81621186 | None:intergenic |
| CGTTGGTGGCGACGGTGATG+TGG | 0.489155 | 4.1:+81621112 | MS.gene93372:CDS |
| GCGGCGAACCACTGACCAAA+CGG | 0.490188 | 4.1:-81621042 | None:intergenic |
| CTATGTGGTGGATATTCCTT+CGG | 0.490303 | 4.1:+81621334 | MS.gene93372:CDS |
| GAGGTCGTGGTGGTTGGTGA+TGG | 0.511327 | 4.1:-81620880 | None:intergenic |
| AGTCTTCACTTCTCCTCCAC+AGG | 0.523366 | 4.1:+81620835 | MS.gene93372:CDS |
| TGTTTGTTGATACAATTGTT+CGG | 0.525160 | 4.1:+81621381 | MS.gene93372:CDS |
| CATCACCGCCGTTTGGTCAG+TGG | 0.527329 | 4.1:+81621034 | MS.gene93372:CDS |
| TATAGTATTAGGAATGGTGT+TGG | 0.528924 | 4.1:-81620940 | None:intergenic |
| GCAGTGGAGGTCGTGGTGGT+TGG | 0.529799 | 4.1:-81620886 | None:intergenic |
| AGGAGAAGTGAAGACTTTGG+TGG | 0.533916 | 4.1:-81620828 | None:intergenic |
| ACGGTGATGTGGGCACACTC+AGG | 0.539446 | 4.1:+81621123 | MS.gene93372:CDS |
| CCAAACGGCGGTGATGGAGG+CGG | 0.539681 | 4.1:-81621027 | None:intergenic |
| TGTAACCTCGTTGGTGGCGA+CGG | 0.546094 | 4.1:+81621104 | MS.gene93372:CDS |
| ATCAAGAGTTGTAACCTCGT+TGG | 0.547255 | 4.1:+81621095 | MS.gene93372:CDS |
| GTTGGTGATGGTCGTAGTGG+TGG | 0.548645 | 4.1:-81620868 | None:intergenic |
| CGGTGATGTGGGCACACTCA+GGG | 0.556265 | 4.1:+81621124 | MS.gene93372:CDS |
| GTTCGGTGCTGCGTGCAGCA+GGG | 0.556567 | 4.1:-81621169 | None:intergenic |
| CAACACTAAAACTGATGACA+TGG | 0.557856 | 4.1:-81621217 | None:intergenic |
| GATCCTCATCGAGGATCTCA+AGG | 0.566346 | 4.1:-81621193 | None:intergenic |
| TAGGAATGGTGTTGGTGACA+GGG | 0.566710 | 4.1:-81620932 | None:intergenic |
| AAGAGTTGTAACCTCGTTGG+TGG | 0.571438 | 4.1:+81621098 | MS.gene93372:CDS |
| AGGCTTGTGGTTTGTCGAAG+CGG | 0.573243 | 4.1:-81621061 | None:intergenic |
| GGAACAGTCACCCTCTGTGG+AGG | 0.574183 | 4.1:-81621291 | None:intergenic |
| TGGTGGTGTGGTTGATCCTG+TGG | 0.579437 | 4.1:-81620851 | None:intergenic |
| TCCTTCGGAAAATACTAAAG+AGG | 0.584494 | 4.1:+81621349 | MS.gene93372:CDS |
| ATCATCCGACCAATTATGCT+CGG | 0.584649 | 4.1:+81620986 | MS.gene93372:CDS |
| TGACCAAACGGCGGTGATGG+AGG | 0.585643 | 4.1:-81621030 | None:intergenic |
| ACACTTCATCCCTCCACAGA+GGG | 0.594198 | 4.1:+81621281 | MS.gene93372:CDS |
| CGGTTTGTGCAAGTGACTGA+AGG | 0.594264 | 4.1:-81621409 | None:intergenic |
| GCCGGAACAGTCACCCTCTG+TGG | 0.599614 | 4.1:-81621294 | None:intergenic |
| GGACTCAACTATCACCGTGC+CGG | 0.603129 | 4.1:-81621312 | None:intergenic |
| GAACAGTCACCCTCTGTGGA+GGG | 0.606405 | 4.1:-81621290 | None:intergenic |
| GACCGCCGAGCATAATTGGT+CGG | 0.608055 | 4.1:-81620991 | None:intergenic |
| GTGGGCTATAGTATTAGGAA+TGG | 0.608376 | 4.1:-81620946 | None:intergenic |
| GTTGGTGGCGACGGTGATGT+GGG | 0.610157 | 4.1:+81621113 | MS.gene93372:CDS |
| CGAAGGAATATCCACCACAT+AGG | 0.619850 | 4.1:-81621333 | None:intergenic |
| TGGAGGAGAAGTGAAGACTT+TGG | 0.627794 | 4.1:-81620831 | None:intergenic |
| AGAGGGTGACTGTTCCGGCA+CGG | 0.639448 | 4.1:+81621298 | MS.gene93372:CDS |
| GGAGGGATGAAGTGTAGTAA+CGG | 0.646842 | 4.1:-81621273 | None:intergenic |
| TGATGGTCGTAGTGGTGGTG+TGG | 0.646910 | 4.1:-81620863 | None:intergenic |
| GTGGTTGGTGATGGTCGTAG+TGG | 0.657655 | 4.1:-81620871 | None:intergenic |
| CGGTGCTGCGTGCAGCAGGG+AGG | 0.659975 | 4.1:-81621166 | None:intergenic |
| TATTGAGTGTGTGTGATAGT+GGG | 0.661022 | 4.1:-81620964 | None:intergenic |
| TGGTGACAGGGTTGACGAAG+AGG | 0.662879 | 4.1:-81620920 | None:intergenic |
| TGGTGTGGTTGATCCTGTGG+AGG | 0.662950 | 4.1:-81620848 | None:intergenic |
| GGTGACAGGGTTGACGAAGA+GGG | 0.665804 | 4.1:-81620919 | None:intergenic |
| GATGAAGTGTAGTAACGGAA+CGG | 0.672049 | 4.1:-81621268 | None:intergenic |
| TTTCGCAGTGGAGGTCGTGG+TGG | 0.685087 | 4.1:-81620890 | None:intergenic |
| ACGCCTTGAGATCCTCGATG+AGG | 0.696994 | 4.1:+81621190 | MS.gene93372:CDS |
| ATCCGACCAATTATGCTCGG+CGG | 0.704061 | 4.1:+81620989 | MS.gene93372:CDS |
| TTGCTGTGTAATGTTCTCTG+CGG | 0.706407 | 4.1:-81621429 | None:intergenic |
| GATAGTTGAGTCCTATGTGG+TGG | 0.708119 | 4.1:+81621322 | MS.gene93372:CDS |
| GGTGATAGTTGAGTCCTATG+TGG | 0.715010 | 4.1:+81621319 | MS.gene93372:CDS |
| TGATGTGGGCACACTCAGGG+AGG | 0.725955 | 4.1:+81621127 | MS.gene93372:CDS |
| CATCACCGTCGCCACCAACG+AGG | 0.726271 | 4.1:-81621109 | None:intergenic |
| TACACTTCATCCCTCCACAG+AGG | 0.732326 | 4.1:+81621280 | MS.gene93372:CDS |
| TGACATGGCGATCCTCATCG+AGG | 0.742190 | 4.1:-81621202 | None:intergenic |
| GCGAACCACTGACCAAACGG+CGG | 0.744614 | 4.1:-81621039 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTCTTGATGAAATTTTTGT+AGG | - | chr4.1:81621084-81621103 | None:intergenic | 25.0% |
| !! | TGTTTGTTGATACAATTGTT+CGG | + | chr4.1:81621381-81621400 | MS.gene93372:CDS | 25.0% |
| TATAGTATTAGGAATGGTGT+TGG | - | chr4.1:81620943-81620962 | None:intergenic | 30.0% | |
| ! | ATGAAATTTTTGTAGGCTTG+TGG | - | chr4.1:81621077-81621096 | None:intergenic | 30.0% |
| ATATTGAGTGTGTGTGATAG+TGG | - | chr4.1:81620968-81620987 | None:intergenic | 35.0% | |
| CAACACTAAAACTGATGACA+TGG | - | chr4.1:81621220-81621239 | None:intergenic | 35.0% | |
| TATTGAGTGTGTGTGATAGT+GGG | - | chr4.1:81620967-81620986 | None:intergenic | 35.0% | |
| TCCTTCGGAAAATACTAAAG+AGG | + | chr4.1:81621349-81621368 | MS.gene93372:CDS | 35.0% | |
| ! | TCCTCTTTAGTATTTTCCGA+AGG | - | chr4.1:81621353-81621372 | None:intergenic | 35.0% |
| !! | ATCAGTTTTAGTGTTGTTGG+TGG | + | chr4.1:81621224-81621243 | MS.gene93372:CDS | 35.0% |
| !! | GTCATCAGTTTTAGTGTTGT+TGG | + | chr4.1:81621221-81621240 | MS.gene93372:CDS | 35.0% |
| !! | TGATAGTGGGCTATAGTATT+AGG | - | chr4.1:81620954-81620973 | None:intergenic | 35.0% |
| ATCAAGAGTTGTAACCTCGT+TGG | + | chr4.1:81621095-81621114 | MS.gene93372:CDS | 40.0% | |
| ATCATCCGACCAATTATGCT+CGG | + | chr4.1:81620986-81621005 | MS.gene93372:CDS | 40.0% | |
| TTGCTGTGTAATGTTCTCTG+CGG | - | chr4.1:81621432-81621451 | None:intergenic | 40.0% | |
| ! | GATGAAGTGTAGTAACGGAA+CGG | - | chr4.1:81621271-81621290 | None:intergenic | 40.0% |
| ! | GTGGGCTATAGTATTAGGAA+TGG | - | chr4.1:81620949-81620968 | None:intergenic | 40.0% |
| !! | AGTGAAGACTTTGGTGGATT+TGG | - | chr4.1:81620825-81620844 | None:intergenic | 40.0% |
| !! | CTATGTGGTGGATATTCCTT+CGG | + | chr4.1:81621334-81621353 | MS.gene93372:CDS | 40.0% |
| AAGAGTTGTAACCTCGTTGG+TGG | + | chr4.1:81621098-81621117 | MS.gene93372:CDS | 45.0% | |
| AGGAGAAGTGAAGACTTTGG+TGG | - | chr4.1:81620831-81620850 | None:intergenic | 45.0% | |
| AGGGAGGTCAACCTTATATC+TGG | + | chr4.1:81621143-81621162 | MS.gene93372:CDS | 45.0% | |
| CGAAGGAATATCCACCACAT+AGG | - | chr4.1:81621336-81621355 | None:intergenic | 45.0% | |
| GATAGTTGAGTCCTATGTGG+TGG | + | chr4.1:81621322-81621341 | MS.gene93372:CDS | 45.0% | |
| GGAGGGATGAAGTGTAGTAA+CGG | - | chr4.1:81621276-81621295 | None:intergenic | 45.0% | |
| GGTGATAGTTGAGTCCTATG+TGG | + | chr4.1:81621319-81621338 | MS.gene93372:CDS | 45.0% | |
| TGGAGGAGAAGTGAAGACTT+TGG | - | chr4.1:81620834-81620853 | None:intergenic | 45.0% | |
| !! | GAAGACTTTGGTGGATTTGG+AGG | - | chr4.1:81620822-81620841 | None:intergenic | 45.0% |
| !! | TAGGAATGGTGTTGGTGACA+GGG | - | chr4.1:81620935-81620954 | None:intergenic | 45.0% |
| !! | TTAGGAATGGTGTTGGTGAC+AGG | - | chr4.1:81620936-81620955 | None:intergenic | 45.0% |
| ACACTTCATCCCTCCACAGA+GGG | + | chr4.1:81621281-81621300 | MS.gene93372:CDS | 50.0% | |
| AGTCTTCACTTCTCCTCCAC+AGG | + | chr4.1:81620835-81620854 | MS.gene93372:CDS | 50.0% | |
| ATCCGACCAATTATGCTCGG+CGG | + | chr4.1:81620989-81621008 | MS.gene93372:CDS | 50.0% | |
| CGGTTTGTGCAAGTGACTGA+AGG | - | chr4.1:81621412-81621431 | None:intergenic | 50.0% | |
| GATCCTCATCGAGGATCTCA+AGG | - | chr4.1:81621196-81621215 | None:intergenic | 50.0% | |
| TACACTTCATCCCTCCACAG+AGG | + | chr4.1:81621280-81621299 | MS.gene93372:CDS | 50.0% | |
| ! | AGGCTTGTGGTTTGTCGAAG+CGG | - | chr4.1:81621064-81621083 | None:intergenic | 50.0% |
| ! | ATCGAGGATCTCAAGGCGTT+CGG | - | chr4.1:81621189-81621208 | None:intergenic | 50.0% |
| !!! | AGAGGGTGTTGTTTTCGCAG+TGG | - | chr4.1:81620905-81620924 | None:intergenic | 50.0% |
| ACGCCTTGAGATCCTCGATG+AGG | + | chr4.1:81621190-81621209 | MS.gene93372:CDS | 55.0% | |
| CAGCAGGGAGGCCAGATATA+AGG | - | chr4.1:81621157-81621176 | None:intergenic | 55.0% | |
| GAACAGTCACCCTCTGTGGA+GGG | - | chr4.1:81621293-81621312 | None:intergenic | 55.0% | |
| GACCGCCGAGCATAATTGGT+CGG | - | chr4.1:81620994-81621013 | None:intergenic | 55.0% | |
| GGACTCAACTATCACCGTGC+CGG | - | chr4.1:81621315-81621334 | None:intergenic | 55.0% | |
| GGTGACAGGGTTGACGAAGA+GGG | - | chr4.1:81620922-81620941 | None:intergenic | 55.0% | |
| TCCACAGAGGGTGACTGTTC+CGG | + | chr4.1:81621293-81621312 | MS.gene93372:CDS | 55.0% | |
| TGACATGGCGATCCTCATCG+AGG | - | chr4.1:81621205-81621224 | None:intergenic | 55.0% | |
| TGATGGAGGCGGTTGTCTCT+TGG | - | chr4.1:81621019-81621038 | None:intergenic | 55.0% | |
| TGGTGACAGGGTTGACGAAG+AGG | - | chr4.1:81620923-81620942 | None:intergenic | 55.0% | |
| TGGTGTGGTTGATCCTGTGG+AGG | - | chr4.1:81620851-81620870 | None:intergenic | 55.0% | |
| ! | TGATGGTCGTAGTGGTGGTG+TGG | - | chr4.1:81620866-81620885 | None:intergenic | 55.0% |
| ! | TGGTGGTGTGGTTGATCCTG+TGG | - | chr4.1:81620854-81620873 | None:intergenic | 55.0% |
| ! | TGTTTTCGCAGTGGAGGTCG+TGG | - | chr4.1:81620896-81620915 | None:intergenic | 55.0% |
| !! | GTGGTTGGTGATGGTCGTAG+TGG | - | chr4.1:81620874-81620893 | None:intergenic | 55.0% |
| !! | GTTGGTGATGGTCGTAGTGG+TGG | - | chr4.1:81620871-81620890 | None:intergenic | 55.0% |
| !! | TGTAACCTCGTTGGTGGCGA+CGG | + | chr4.1:81621104-81621123 | MS.gene93372:CDS | 55.0% |
| !!! | GGGTGTTGTTTTCGCAGTGG+AGG | - | chr4.1:81620902-81620921 | None:intergenic | 55.0% |
| ACGGTGATGTGGGCACACTC+AGG | + | chr4.1:81621123-81621142 | MS.gene93372:CDS | 60.0% | |
| AGAGGGTGACTGTTCCGGCA+CGG | + | chr4.1:81621298-81621317 | MS.gene93372:CDS | 60.0% | |
| CACTGACCAAACGGCGGTGA+TGG | - | chr4.1:81621036-81621055 | None:intergenic | 60.0% | |
| CATCACCGCCGTTTGGTCAG+TGG | + | chr4.1:81621034-81621053 | MS.gene93372:CDS | 60.0% | |
| CGGTGATGTGGGCACACTCA+GGG | + | chr4.1:81621124-81621143 | MS.gene93372:CDS | 60.0% | |
| GCGAACCACTGACCAAACGG+CGG | - | chr4.1:81621042-81621061 | None:intergenic | 60.0% | |
| GCGGCGAACCACTGACCAAA+CGG | - | chr4.1:81621045-81621064 | None:intergenic | 60.0% | |
| GGAACAGTCACCCTCTGTGG+AGG | - | chr4.1:81621294-81621313 | None:intergenic | 60.0% | |
| GGACGACCGCCGAGCATAAT+TGG | - | chr4.1:81620998-81621017 | None:intergenic | 60.0% | |
| TGATGTGGGCACACTCAGGG+AGG | + | chr4.1:81621127-81621146 | MS.gene93372:CDS | 60.0% | |
| TTTCGCAGTGGAGGTCGTGG+TGG | - | chr4.1:81620893-81620912 | None:intergenic | 60.0% | |
| ! | TGACCAAACGGCGGTGATGG+AGG | - | chr4.1:81621033-81621052 | None:intergenic | 60.0% |
| !! | GAGGTCGTGGTGGTTGGTGA+TGG | - | chr4.1:81620883-81620902 | None:intergenic | 60.0% |
| !! | GTTGGTGGCGACGGTGATGT+GGG | + | chr4.1:81621113-81621132 | MS.gene93372:CDS | 60.0% |
| CATCACCGTCGCCACCAACG+AGG | - | chr4.1:81621112-81621131 | None:intergenic | 65.0% | |
| GCAGTGGAGGTCGTGGTGGT+TGG | - | chr4.1:81620889-81620908 | None:intergenic | 65.0% | |
| GCCGGAACAGTCACCCTCTG+TGG | - | chr4.1:81621297-81621316 | None:intergenic | 65.0% | |
| !! | CCAAACGGCGGTGATGGAGG+CGG | - | chr4.1:81621030-81621049 | None:intergenic | 65.0% |
| !! | CGTTGGTGGCGACGGTGATG+TGG | + | chr4.1:81621112-81621131 | MS.gene93372:CDS | 65.0% |
| !! | GTTCGGTGCTGCGTGCAGCA+GGG | - | chr4.1:81621172-81621191 | None:intergenic | 65.0% |
| CCGCCTCCATCACCGCCGTT+TGG | + | chr4.1:81621027-81621046 | MS.gene93372:CDS | 70.0% | |
| !! | CGTTCGGTGCTGCGTGCAGC+AGG | - | chr4.1:81621173-81621192 | None:intergenic | 70.0% |
| !! | CGGTGCTGCGTGCAGCAGGG+AGG | - | chr4.1:81621169-81621188 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 81620816 | 81621472 | 81620816 | ID=MS.gene93372 |
| chr4.1 | mRNA | 81620816 | 81621472 | 81620816 | ID=MS.gene93372.t1;Parent=MS.gene93372 |
| chr4.1 | exon | 81620816 | 81621472 | 81620816 | ID=MS.gene93372.t1.exon1;Parent=MS.gene93372.t1 |
| chr4.1 | CDS | 81620816 | 81621472 | 81620816 | ID=cds.MS.gene93372.t1;Parent=MS.gene93372.t1 |
| Gene Sequence |
| Protein sequence |
