Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93746.t1 | PNY09036.1 | 95.9 | 662 | 26 | 1 | 7 | 668 | 16 | 676 | 3.60E-276 | 960.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93746.t1 | Q9LM25 | 66.1 | 654 | 214 | 3 | 5 | 654 | 9 | 658 | 1.3e-178 | 627.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93746.t1 | A0A2K3P165 | 95.9 | 662 | 26 | 1 | 7 | 668 | 16 | 676 | 2.6e-276 | 960.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93746 | MS.gene77496 | PPI |
| MS.gene93746 | MS.gene79861 | PPI |
| MS.gene045393 | MS.gene93746 | PPI |
| MS.gene93746 | MS.gene75708 | PPI |
| MS.gene93746 | MS.gene030876 | PPI |
| MS.gene47967 | MS.gene93746 | PPI |
| MS.gene93746 | MS.gene27997 | PPI |
| MS.gene93746 | MS.gene57360 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93746.t1 | MTR_8g107400 | 98.368 | 674 | 5 | 1 | 1 | 668 | 1 | 674 | 0.0 | 1365 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93746.t1 | AT1G18260 | 75.349 | 645 | 151 | 3 | 5 | 645 | 9 | 649 | 0.0 | 1020 |
| MS.gene93746.t1 | AT1G73570 | 64.634 | 656 | 180 | 6 | 7 | 656 | 11 | 620 | 0.0 | 863 |
Find 198 sgRNAs with CRISPR-Local
Find 461 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCAGCAGCATTCCCTTTC+TGG | 0.111186 | 4.2:-172951 | None:intergenic |
| CTCAACCCAAGCTTCTAATT+TGG | 0.133073 | 4.2:-176755 | None:intergenic |
| GAACATGCTGCTTTACTAAT+TGG | 0.216409 | 4.2:+174655 | MS.gene93746:CDS |
| CTTCCTCTTTGAAGTCTTCC+TGG | 0.216814 | 4.2:-172265 | None:intergenic |
| CTTTCAGATTCTCGAGTATC+AGG | 0.269138 | 4.2:+172927 | MS.gene93746:CDS |
| TTTCTGCAACTAATTTGTAT+AGG | 0.289820 | 4.2:-174384 | None:intergenic |
| GAACCATGCTGACAGTTTAT+TGG | 0.304241 | 4.2:+175034 | MS.gene93746:CDS |
| TTCGATGACAGGAGAATCTT+TGG | 0.308385 | 4.2:-172830 | None:intergenic |
| GCTCCATTGTGTAGCCTAAC+AGG | 0.313274 | 4.2:-172853 | None:intergenic |
| TCAACCCAAGCTTCTAATTT+GGG | 0.314522 | 4.2:-176754 | None:intergenic |
| GTCGGTATCGGATTGGGATT+GGG | 0.317404 | 4.2:-172414 | None:intergenic |
| CCAAGTTCATTAGGGCGATT+TGG | 0.319646 | 4.2:-176901 | None:intergenic |
| CGAGATCTTCTTCGGATTTG+TGG | 0.319764 | 4.2:-172346 | None:intergenic |
| CTCTTACAAGCTTGTGGGTT+CGG | 0.324705 | 4.2:+175009 | MS.gene93746:CDS |
| TGGCAATATGCAATCTAAAA+TGG | 0.339071 | 4.2:+172637 | MS.gene93746:CDS |
| TTCTGCAACTAATTTGTATA+GGG | 0.339271 | 4.2:-174383 | None:intergenic |
| GCAGGCACACCAAGTTCATT+AGG | 0.341898 | 4.2:-176910 | None:intergenic |
| CCGGCTGCACAATCAGTGTT+AGG | 0.347506 | 4.2:+172536 | MS.gene93746:CDS |
| GCTTGGATTCTCGACAAATA+TGG | 0.347854 | 4.2:+174532 | MS.gene93746:CDS |
| CTCCTTTGTCGACAGCCTTA+AGG | 0.350608 | 4.2:-173050 | None:intergenic |
| GCCCTAGAAGCATACTTAAA+AGG | 0.356535 | 4.2:+174436 | MS.gene93746:CDS |
| CCACATAATTGATTCTTTGC+CGG | 0.356912 | 4.2:+176723 | MS.gene93746:CDS |
| TTGGGTTGAGAATGTGCTTT+TGG | 0.359424 | 4.2:+176768 | MS.gene93746:CDS |
| CAAAGGAGAGCCTCGCTCTA+TGG | 0.359917 | 4.2:+173065 | MS.gene93746:CDS |
| CGTTAAGCTTTATGCTGAAT+TGG | 0.360446 | 4.2:+172777 | MS.gene93746:CDS |
| CACCTCTATTCTGCTTATAA+TGG | 0.362654 | 4.2:+173177 | MS.gene93746:CDS |
| TGGTTGAGGGTTCGAAGATT+TGG | 0.369315 | 4.2:-172385 | None:intergenic |
| ACAAGACACCCAGGTTATAA+TGG | 0.382368 | 4.2:-173461 | None:intergenic |
| CGTCGGTATCGGATTGGGAT+TGG | 0.382533 | 4.2:-172415 | None:intergenic |
| ATTGGAGATGCATATTACTA+TGG | 0.384953 | 4.2:+174673 | MS.gene93746:CDS |
| GTATGCTTCTAGGGCCCATC+TGG | 0.385561 | 4.2:-174428 | None:intergenic |
| GCGAGCTGGTAGAAAGCCTT+TGG | 0.388487 | 4.2:-173561 | None:intergenic |
| CCTCGCTCTATGGAACTTCT+TGG | 0.389738 | 4.2:+173075 | MS.gene93746:CDS |
| GCACAAGCCATGTTCAATCT+TGG | 0.390604 | 4.2:+174876 | MS.gene93746:CDS |
| AGCAGCAGCATTCCCTTTCT+GGG | 0.397407 | 4.2:-172950 | None:intergenic |
| CAATTCAGCATAAAGCTTAA+CGG | 0.397810 | 4.2:-172776 | None:intergenic |
| AGCATGTGCATGGGTGAATC+TGG | 0.400739 | 4.2:+174562 | MS.gene93746:CDS |
| ATTGAAACAGCTGCAGAATC+TGG | 0.402527 | 4.2:+172509 | MS.gene93746:CDS |
| TTCATCCCACTCGGCGGAAG+AGG | 0.403275 | 4.2:-172306 | None:intergenic |
| TTTGAGGCGTGACCATTCTA+AGG | 0.404190 | 4.2:+173014 | MS.gene93746:CDS |
| CATGGAGTTCTTTGTCCAGA+TGG | 0.413844 | 4.2:+174413 | MS.gene93746:CDS |
| GAGATATATGCCAGGGGAGC+AGG | 0.414002 | 4.2:+173099 | MS.gene93746:CDS |
| CTATCCCAAATTAGAAGCTT+GGG | 0.415557 | 4.2:+176750 | MS.gene93746:CDS |
| TCTCTCAACACCTGCTCCCC+TGG | 0.418996 | 4.2:-173109 | None:intergenic |
| AGCAGAATAGAGGTGGTGTT+TGG | 0.420812 | 4.2:-173169 | None:intergenic |
| TCTATCCCAAATTAGAAGCT+TGG | 0.428097 | 4.2:+176749 | MS.gene93746:CDS |
| AGTAAGCCATTCAAAAGCTT+TGG | 0.432560 | 4.2:-173139 | None:intergenic |
| GAGAGCGTCGGTATCGGATT+GGG | 0.434446 | 4.2:-172420 | None:intergenic |
| AAGCACTCAGAAAGTCTAAA+GGG | 0.435467 | 4.2:+172890 | MS.gene93746:CDS |
| ACTTTGGCCTTCGTGGTTTG+AGG | 0.440005 | 4.2:+172998 | MS.gene93746:CDS |
| TTGTGCATTAGATTGTGATT+TGG | 0.440437 | 4.2:-174859 | None:intergenic |
| GAGATCTTCTTCGGATTTGT+GGG | 0.440968 | 4.2:-172345 | None:intergenic |
| CCAAATCGCCCTAATGAACT+TGG | 0.445548 | 4.2:+176901 | MS.gene93746:CDS |
| GTGGTGGCAAGCTTCTGAGC+AGG | 0.454049 | 4.2:+174627 | MS.gene93746:CDS |
| ACTGGCTCTTACAAGCTTGT+GGG | 0.457829 | 4.2:+175004 | MS.gene93746:CDS |
| TCCGAAGAAGATCTCGATCC+TGG | 0.458601 | 4.2:+172353 | MS.gene93746:CDS |
| CACAAGCCATGTTCAATCTT+GGG | 0.458951 | 4.2:+174877 | MS.gene93746:CDS |
| CTTGTAAGAGCCAGTGTGAC+TGG | 0.459303 | 4.2:-174996 | None:intergenic |
| CACTGGCTCTTACAAGCTTG+TGG | 0.460890 | 4.2:+175003 | MS.gene93746:CDS |
| AAGATTTGGCGCCATGAGCC+AGG | 0.462678 | 4.2:-172371 | None:intergenic |
| CCACTCGGCGGAAGAGGAAT+CGG | 0.463262 | 4.2:-172300 | None:intergenic |
| GAAGAGGAATCGGAATCAGC+GGG | 0.465967 | 4.2:-172290 | None:intergenic |
| AGCAGCTCGGTCATAATCTC+TGG | 0.466071 | 4.2:-174820 | None:intergenic |
| CTGGTAGTACATGAACTAGA+TGG | 0.467890 | 4.2:-176935 | None:intergenic |
| TATTTGTACGTCAAAGGCTA+TGG | 0.472526 | 4.2:+173207 | MS.gene93746:CDS |
| AGGCAAGCTGTTGTTGTAGC+TGG | 0.473119 | 4.2:+176865 | MS.gene93746:CDS |
| GCCAGGATCGAGATCTTCTT+CGG | 0.476479 | 4.2:-172354 | None:intergenic |
| ATCAGCGGGCACATTCTTTG+TGG | 0.476723 | 4.2:+174608 | MS.gene93746:CDS |
| GGCACTCTCATGGTTCCTTA+AGG | 0.476831 | 4.2:+173035 | MS.gene93746:CDS |
| TTCCTCTTTGAAGTCTTCCT+GGG | 0.477460 | 4.2:-172264 | None:intergenic |
| CTACGTTCTCGTCCTTTCCC+AGG | 0.477744 | 4.2:+172247 | MS.gene93746:CDS |
| CAGGCACACCAAGTTCATTA+GGG | 0.479473 | 4.2:-176909 | None:intergenic |
| TCCGCCGAGTGGGATGAATT+CGG | 0.482359 | 4.2:+172311 | MS.gene93746:CDS |
| CCTAACACTGATTGTGCAGC+CGG | 0.484541 | 4.2:-172536 | None:intergenic |
| TCTAATTTGGGATAGACATC+CGG | 0.486599 | 4.2:-176742 | None:intergenic |
| TTATCATCACTTTGCTTCAG+AGG | 0.489052 | 4.2:+172613 | MS.gene93746:CDS |
| CGGCTGCACAATCAGTGTTA+GGG | 0.491821 | 4.2:+172537 | MS.gene93746:CDS |
| TAGAAGAGAGAGAAACAACT+TGG | 0.492781 | 4.2:-172186 | None:intergenic |
| ATGGAGTTCTTTGTCCAGAT+GGG | 0.494613 | 4.2:+174414 | MS.gene93746:CDS |
| TATCATCACTTTGCTTCAGA+GGG | 0.497408 | 4.2:+172614 | MS.gene93746:CDS |
| TACAAATTAGTTGCAGAAAG+AGG | 0.498474 | 4.2:+174388 | MS.gene93746:CDS |
| AGCTTCATCATAGTAACGCT+TGG | 0.499212 | 4.2:-174946 | None:intergenic |
| CATTCTTGAGTACAACATAT+AGG | 0.500669 | 4.2:-174473 | None:intergenic |
| CAGAAAGTCTAAAGGGGAAG+AGG | 0.501798 | 4.2:+172897 | MS.gene93746:CDS |
| GTCTTGTATCTCAAAGGGAT+TGG | 0.502155 | 4.2:+173477 | MS.gene93746:CDS |
| AACGTAGGGACGAGCGGCGA+CGG | 0.502357 | 4.2:-172231 | None:intergenic |
| AGCCTAACAGGTTCGATGAC+AGG | 0.503789 | 4.2:-172841 | None:intergenic |
| TCGGTATCGGATTGGGATTG+GGG | 0.508940 | 4.2:-172413 | None:intergenic |
| CCCGCAGATACAGCACAGTT+AGG | 0.510812 | 4.2:-176831 | None:intergenic |
| CTGTGCTGTATCTGCGGGAG+AGG | 0.511204 | 4.2:+176836 | MS.gene93746:CDS |
| CTGGGTGTCTTGTATCTCAA+AGG | 0.513773 | 4.2:+173471 | MS.gene93746:CDS |
| CTATATGTTGTACTCAAGAA+TGG | 0.515930 | 4.2:+174474 | MS.gene93746:CDS |
| TGATGCAGAAAGGCATCAGC+GGG | 0.520042 | 4.2:+174594 | MS.gene93746:CDS |
| TGCAGCTGTTTCAATCTCGC+CGG | 0.520981 | 4.2:-172501 | None:intergenic |
| TCTTGAACCCAACACCAAGA+TGG | 0.522594 | 4.2:-173593 | None:intergenic |
| AGCTAATGACTGGGGATGCT+AGG | 0.523232 | 4.2:+172462 | MS.gene93746:CDS |
| AGAGAGCGTCGGTATCGGAT+TGG | 0.523428 | 4.2:-172421 | None:intergenic |
| ATCGGTTATTTGTACGTCAA+AGG | 0.524544 | 4.2:+173201 | MS.gene93746:CDS |
| AGCCTTTGGTTGACCGTGGT+TGG | 0.525956 | 4.2:-173547 | None:intergenic |
| GTGACTGGCAACTTAGCTGC+AGG | 0.528860 | 4.2:-174981 | None:intergenic |
| CAGTTAGGAGGCACGCAAAG+AGG | 0.529036 | 4.2:-176816 | None:intergenic |
| GCCGTCGCTAAGCTAATGAC+TGG | 0.530159 | 4.2:+172452 | MS.gene93746:CDS |
| TCCTAACTGTGCTGTATCTG+CGG | 0.531215 | 4.2:+176830 | MS.gene93746:CDS |
| TGCCATTATAAGCAGAATAG+AGG | 0.532353 | 4.2:-173179 | None:intergenic |
| GAGATGCATATTACTATGGC+CGG | 0.532375 | 4.2:+174677 | MS.gene93746:CDS |
| GTAGTAGAGAGCGTCGGTAT+CGG | 0.537121 | 4.2:-172426 | None:intergenic |
| GCATACTTAAAAGGCGATGT+TGG | 0.538174 | 4.2:+174445 | MS.gene93746:CDS |
| GGTTGGAGGCCATTATAACC+TGG | 0.538907 | 4.2:+173452 | MS.gene93746:CDS |
| CCTAACTGTGCTGTATCTGC+GGG | 0.539131 | 4.2:+176831 | MS.gene93746:CDS |
| TCGAGTATCAGGCCCAGAAA+GGG | 0.539269 | 4.2:+172938 | MS.gene93746:CDS |
| TATTCTGCTTATAATGGCAT+CGG | 0.539588 | 4.2:+173183 | MS.gene93746:CDS |
| TACTCAAGAATGGCTGAGAT+GGG | 0.540274 | 4.2:+174484 | MS.gene93746:CDS |
| TTCTTGGAGAGATATATGCC+AGG | 0.541938 | 4.2:+173091 | MS.gene93746:CDS |
| CCGTCGCTAAGCTAATGACT+GGG | 0.541958 | 4.2:+172453 | MS.gene93746:CDS |
| TGGCACAGAGCAATGCTGCT+TGG | 0.542410 | 4.2:+174515 | MS.gene93746:CDS |
| GAAGCACTCAGAAAGTCTAA+AGG | 0.545764 | 4.2:+172889 | MS.gene93746:CDS |
| CTTTGAAGTCTTCCTGGGAA+AGG | 0.546194 | 4.2:-172259 | None:intergenic |
| CTCGAGTATCAGGCCCAGAA+AGG | 0.546827 | 4.2:+172937 | MS.gene93746:CDS |
| GTACTCAAGAATGGCTGAGA+TGG | 0.546890 | 4.2:+174483 | MS.gene93746:CDS |
| CATCACTTTGCTTCAGAGGG+TGG | 0.547314 | 4.2:+172617 | MS.gene93746:CDS |
| TGGGTGTCTTGTATCTCAAA+GGG | 0.547469 | 4.2:+173472 | MS.gene93746:CDS |
| ACCATGAGAGTGCCTTAGAA+TGG | 0.547779 | 4.2:-173026 | None:intergenic |
| GGCATGTAAATTCTTTATTG+TGG | 0.547891 | 4.2:+173521 | MS.gene93746:CDS |
| CTCCTGTCATCGAACCTGTT+AGG | 0.549324 | 4.2:+172839 | MS.gene93746:CDS |
| GGGACGAGCGGCGACGGAGA+GGG | 0.550536 | 4.2:-172225 | None:intergenic |
| AAGATCTCGATCCTGGCTCA+TGG | 0.552357 | 4.2:+172360 | MS.gene93746:CDS |
| AGCTAAGTTGCCAGTCACAC+TGG | 0.552431 | 4.2:+174986 | MS.gene93746:CDS |
| ATCTGCGGGAGAGGCAAAGA+AGG | 0.552687 | 4.2:+176845 | MS.gene93746:CDS |
| GAAGGTCAAGAGGAAGTCCT+TGG | 0.553360 | 4.2:-174917 | None:intergenic |
| AGCGGGCACATTCTTTGTGG+TGG | 0.557705 | 4.2:+174611 | MS.gene93746:CDS |
| CGATTCCTCTTCCGCCGAGT+GGG | 0.558351 | 4.2:+172301 | MS.gene93746:CDS |
| GACGAGAACGTAGGGACGAG+CGG | 0.563841 | 4.2:-172237 | None:intergenic |
| GCTGCTGATAACGAAGAGGT+TGG | 0.564461 | 4.2:+173435 | MS.gene93746:CDS |
| CTGATGCAGAAAGGCATCAG+CGG | 0.569709 | 4.2:+174593 | MS.gene93746:CDS |
| GATGGAAAATCTTTGCGAGC+TGG | 0.569784 | 4.2:-173575 | None:intergenic |
| TACATGAACTAGATGGGTGC+AGG | 0.570563 | 4.2:-176928 | None:intergenic |
| GCTGATAACGAAGAGGTTGG+AGG | 0.571487 | 4.2:+173438 | MS.gene93746:CDS |
| TGGTGGCAAGCTTCTGAGCA+GGG | 0.573319 | 4.2:+174628 | MS.gene93746:CDS |
| TGGGAAAGGACGAGAACGTA+GGG | 0.573995 | 4.2:-172245 | None:intergenic |
| CTTAAAAGGCGATGTTGGCA+AGG | 0.581519 | 4.2:+174450 | MS.gene93746:CDS |
| CCGGCAAAGAATCAATTATG+TGG | 0.581872 | 4.2:-176723 | None:intergenic |
| TGGTAGTACATGAACTAGAT+GGG | 0.582581 | 4.2:-176934 | None:intergenic |
| AGATTATGACCGAGCTGCTG+AGG | 0.583584 | 4.2:+174824 | MS.gene93746:CDS |
| GCATGTAAGCCTCAGCAGCT+CGG | 0.584759 | 4.2:-174833 | None:intergenic |
| TGCCAACCACGGTCAACCAA+AGG | 0.585107 | 4.2:+173545 | MS.gene93746:CDS |
| CATGTACCCAAGATTGAACA+TGG | 0.588032 | 4.2:-174883 | None:intergenic |
| GTTCAAGAAGAACGTTCCGT+TGG | 0.590782 | 4.2:+173608 | MS.gene93746:CDS |
| TACATGCATGAGCATGGCCA+AGG | 0.593236 | 4.2:+174900 | MS.gene93746:CDS |
| AGCTGCAGAATCTGGTCACC+CGG | 0.594384 | 4.2:+172517 | MS.gene93746:CDS |
| AGATGCATATTACTATGGCC+GGG | 0.594389 | 4.2:+174678 | MS.gene93746:CDS |
| AGCTGTTGTTGTAGCTGGAG+AGG | 0.596230 | 4.2:+176870 | MS.gene93746:CDS |
| TTCCTTAAGGCTGTCGACAA+AGG | 0.597269 | 4.2:+173048 | MS.gene93746:CDS |
| AGTTAGGAGGCACGCAAAGA+GGG | 0.597506 | 4.2:-176815 | None:intergenic |
| CCGATTCCTCTTCCGCCGAG+TGG | 0.598866 | 4.2:+172300 | MS.gene93746:CDS |
| AGGATCATAGAAGAGGGCTC+CGG | 0.599402 | 4.2:+172482 | MS.gene93746:CDS |
| AATGGCTGAGATGGGCTATG+AGG | 0.600102 | 4.2:+174492 | MS.gene93746:CDS |
| ACCATTCTAAGGCACTCTCA+TGG | 0.600969 | 4.2:+173025 | MS.gene93746:CDS |
| CTTGGGTACATGCATGAGCA+TGG | 0.601824 | 4.2:+174894 | MS.gene93746:CDS |
| GGAAGAGGAATCGGAATCAG+CGG | 0.605062 | 4.2:-172291 | None:intergenic |
| TTTATTGTGGCTGCCAACCA+CGG | 0.607057 | 4.2:+173534 | MS.gene93746:CDS |
| TGGAGAACGAAGCATGTGCA+TGG | 0.609705 | 4.2:+174552 | MS.gene93746:CDS |
| TCTTGGAGAGATATATGCCA+GGG | 0.613142 | 4.2:+173092 | MS.gene93746:CDS |
| AGTAACGCTTGGCTAGATGA+AGG | 0.615333 | 4.2:-174935 | None:intergenic |
| GCAGATACAGCACAGTTAGG+AGG | 0.616456 | 4.2:-176828 | None:intergenic |
| GCTGCTGCTATGTACAAAGT+CGG | 0.618345 | 4.2:+172964 | MS.gene93746:CDS |
| TCACCAATAAACTGTCAGCA+TGG | 0.619540 | 4.2:-175037 | None:intergenic |
| GTTGGAGGCCATTATAACCT+GGG | 0.621285 | 4.2:+173453 | MS.gene93746:CDS |
| CCCAGTCATTAGCTTAGCGA+CGG | 0.623012 | 4.2:-172453 | None:intergenic |
| CTAACACTGATTGTGCAGCC+GGG | 0.623985 | 4.2:-172535 | None:intergenic |
| AGTGAAAAGAGATGTCAAGT+TGG | 0.627405 | 4.2:+173500 | MS.gene93746:CDS |
| AGAAGAGAGAGAAACAACTT+GGG | 0.628704 | 4.2:-172185 | None:intergenic |
| TTGGCTAGATGAAGGTCAAG+AGG | 0.635355 | 4.2:-174927 | None:intergenic |
| GGATGCTAGGATCATAGAAG+AGG | 0.641737 | 4.2:+172475 | MS.gene93746:CDS |
| GATGCTAGGATCATAGAAGA+GGG | 0.642173 | 4.2:+172476 | MS.gene93746:CDS |
| AGGGACGAGCGGCGACGGAG+AGG | 0.645419 | 4.2:-172226 | None:intergenic |
| AGCACTCAGAAAGTCTAAAG+GGG | 0.648367 | 4.2:+172891 | MS.gene93746:CDS |
| TTCCCAGGAAGACTTCAAAG+AGG | 0.649010 | 4.2:+172262 | MS.gene93746:CDS |
| CATCTGGACAAAGAACTCCA+TGG | 0.650425 | 4.2:-174412 | None:intergenic |
| AGTCATTAGCTTAGCGACGG+CGG | 0.653596 | 4.2:-172450 | None:intergenic |
| CTGGGAAAGGACGAGAACGT+AGG | 0.654943 | 4.2:-172246 | None:intergenic |
| AGAAAGCCTTTGGTTGACCG+TGG | 0.656771 | 4.2:-173551 | None:intergenic |
| CATTATAAGCAGAATAGAGG+TGG | 0.658072 | 4.2:-173176 | None:intergenic |
| AGAGAGAGAAACAACTTGGG+TGG | 0.661851 | 4.2:-172182 | None:intergenic |
| GGCTGAGATGGGCTATGAGG+TGG | 0.663373 | 4.2:+174495 | MS.gene93746:CDS |
| CCAAGAAGTTCCATAGAGCG+AGG | 0.664738 | 4.2:-173075 | None:intergenic |
| GTCACCGAATTCATCCCACT+CGG | 0.672938 | 4.2:-172315 | None:intergenic |
| CGGTATCGGATTGGGATTGG+GGG | 0.674283 | 4.2:-172412 | None:intergenic |
| TAGTTGCAGAAAGAGGTCCA+TGG | 0.680024 | 4.2:+174395 | MS.gene93746:CDS |
| CTTTGAGATACAAGACACCC+AGG | 0.682977 | 4.2:-173470 | None:intergenic |
| AAAGGCTGCTGATAACGAAG+AGG | 0.689088 | 4.2:+173431 | MS.gene93746:CDS |
| ACCGAATTCATCCCACTCGG+CGG | 0.692055 | 4.2:-172312 | None:intergenic |
| GGAGAACGAAGCATGTGCAT+GGG | 0.696482 | 4.2:+174553 | MS.gene93746:CDS |
| CGTCGCTAAGCTAATGACTG+GGG | 0.713359 | 4.2:+172454 | MS.gene93746:CDS |
| CTTGGAGAGATATATGCCAG+GGG | 0.717789 | 4.2:+173093 | MS.gene93746:CDS |
| GAACCTGTTAGGCTACACAA+TGG | 0.719174 | 4.2:+172850 | MS.gene93746:CDS |
| AAGAGGAATCGGAATCAGCG+GGG | 0.738604 | 4.2:-172289 | None:intergenic |
| GGCGGAGTAGTAGAGAGCGT+CGG | 0.742864 | 4.2:-172432 | None:intergenic |
| GGTCACGCCTCAAACCACGA+AGG | 0.781390 | 4.2:-173005 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATATATTAAAATAGGT+TGG | - | chr4.2:175361-175380 | None:intergenic | 10.0% |
| !! | GAGTAATAATATATTAAAAT+AGG | - | chr4.2:175365-175384 | None:intergenic | 10.0% |
| !!! | AAAAAGTAAATTTTAAAAAG+CGG | - | chr4.2:175309-175328 | None:intergenic | 10.0% |
| !!! | TTATAATAAATATGTTTCTA+AGG | - | chr4.2:175387-175406 | None:intergenic | 10.0% |
| !!! | TTTTATTTTATTTATACCTA+GGG | - | chr4.2:176429-176448 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTATTTATACCT+AGG | - | chr4.2:176430-176449 | None:intergenic | 10.0% |
| !! | AATATTAAATTTGTGATCTT+AGG | + | chr4.2:174354-174373 | MS.gene93746:intron | 15.0% |
| !! | AATGAAGACTAATATTATTT+GGG | + | chr4.2:173317-173336 | MS.gene93746:intron | 15.0% |
| !! | AATGTTATGTAAATAAAGAA+AGG | - | chr4.2:173285-173304 | None:intergenic | 15.0% |
| !! | ACGATTCATAAATTTAATAT+TGG | - | chr4.2:174265-174284 | None:intergenic | 15.0% |
| !! | CGATTCATAAATTTAATATT+GGG | - | chr4.2:174264-174283 | None:intergenic | 15.0% |
| !! | GAATGGTAATAAAAAAAAAA+AGG | + | chr4.2:176461-176480 | MS.gene93746:intron | 15.0% |
| !! | TTATGATATAATAGTCATTA+GGG | - | chr4.2:174301-174320 | None:intergenic | 15.0% |
| !! | TTGATTCATTAATTAAGAAT+AGG | - | chr4.2:172718-172737 | None:intergenic | 15.0% |
| !! | TTTATGATATAATAGTCATT+AGG | - | chr4.2:174302-174321 | None:intergenic | 15.0% |
| !!! | AAAAAAAGTTTTTATGAAAG+AGG | + | chr4.2:173932-173951 | MS.gene93746:intron | 15.0% |
| !!! | AAAAGTAAATTTTAAAAAGC+GGG | - | chr4.2:175308-175327 | None:intergenic | 15.0% |
| !!! | AAACTATTTTTCGATAAAAT+AGG | - | chr4.2:176514-176533 | None:intergenic | 15.0% |
| !!! | ACTTTTTTTTTTTGCAAATT+CGG | - | chr4.2:173921-173940 | None:intergenic | 15.0% |
| !!! | ATTTTTATGATTTTATTCCT+AGG | + | chr4.2:176373-176392 | MS.gene93746:intron | 15.0% |
| !!! | TAAAAAACTTTTTTCAAAAG+AGG | - | chr4.2:175417-175436 | None:intergenic | 15.0% |
| !!! | TATTATATTCCCTATTTTTA+AGG | - | chr4.2:176213-176232 | None:intergenic | 15.0% |
| !! | AATAAAATAAAAACCATTCC+CGG | + | chr4.2:176437-176456 | MS.gene93746:intron | 20.0% |
| !! | AGAAAGGAAAAAAAAATGTA+AGG | - | chr4.2:173269-173288 | None:intergenic | 20.0% |
| !! | ATAATTATGATGGTCATTAT+TGG | + | chr4.2:174224-174243 | MS.gene93746:intron | 20.0% |
| !! | ATGAAGACTAATATTATTTG+GGG | + | chr4.2:173318-173337 | MS.gene93746:intron | 20.0% |
| !! | GAATGAAGACTAATATTATT+TGG | + | chr4.2:173316-173335 | MS.gene93746:intron | 20.0% |
| !! | GTTAACATTATAATATTCCA+AGG | + | chr4.2:176185-176204 | MS.gene93746:intron | 20.0% |
| !! | TATACTAAAATAAATTGCAG+AGG | - | chr4.2:173731-173750 | None:intergenic | 20.0% |
| !! | TCATTAGAACATAATTATGA+TGG | + | chr4.2:174214-174233 | MS.gene93746:intron | 20.0% |
| !! | TTACCTATGATCTATTTAAA+TGG | + | chr4.2:175743-175762 | MS.gene93746:intron | 20.0% |
| !! | TTATGTTCTAATGAATTATG+TGG | - | chr4.2:174208-174227 | None:intergenic | 20.0% |
| !!! | AAAAGTTTTCCAAAAGAAAA+TGG | - | chr4.2:176285-176304 | None:intergenic | 20.0% |
| !!! | AGTTTACTAAATTTTATTCC+CGG | - | chr4.2:176331-176350 | None:intergenic | 20.0% |
| !!! | ATGTGCTTATTGTTTTTATT+AGG | + | chr4.2:176699-176718 | MS.gene93746:intron | 20.0% |
| !!! | GGAAATTTGGATTTTTAATA+CGG | + | chr4.2:175236-175255 | MS.gene93746:intron | 20.0% |
| !!! | GTCTTTAAAAATGATATTGA+AGG | + | chr4.2:173846-173865 | MS.gene93746:intron | 20.0% |
| !!! | TGATGAAGTTTTTAATATTG+CGG | + | chr4.2:175866-175885 | MS.gene93746:intron | 20.0% |
| !!! | TTTTGTTTTGTATTATACAC+TGG | + | chr4.2:173877-173896 | MS.gene93746:intron | 20.0% |
| ! | AAATGAACATAAACTACAAC+AGG | - | chr4.2:175689-175708 | None:intergenic | 25.0% |
| ! | AACAGTGAATACTGAATTAA+TGG | - | chr4.2:174156-174175 | None:intergenic | 25.0% |
| ! | ACTAAACCAAACTTATAGTT+CGG | - | chr4.2:173971-173990 | None:intergenic | 25.0% |
| ! | AGAAAAAATAACACAACAGA+AGG | - | chr4.2:176638-176657 | None:intergenic | 25.0% |
| ! | AGTAAACTTGTAACAAACAT+AGG | + | chr4.2:176343-176362 | MS.gene93746:intron | 25.0% |
| ! | AGTTATATTTGTAGATTCCT+AGG | - | chr4.2:176393-176412 | None:intergenic | 25.0% |
| ! | ATAAAATAAAAACCATTCCC+GGG | + | chr4.2:176438-176457 | MS.gene93746:intron | 25.0% |
| ! | ATATAATAGTCATTAGGGAA+TGG | - | chr4.2:174296-174315 | None:intergenic | 25.0% |
| ! | ATTTCTACCATTATATTCCA+AGG | - | chr4.2:176132-176151 | None:intergenic | 25.0% |
| ! | CATTGGAGTAAAATACAAAT+TGG | - | chr4.2:176546-176565 | None:intergenic | 25.0% |
| ! | CCAAAAAATGTACTAAGTAA+GGG | + | chr4.2:176061-176080 | MS.gene93746:intron | 25.0% |
| ! | GTTGTAGTTTATGTTCATTT+AGG | + | chr4.2:175689-175708 | MS.gene93746:intron | 25.0% |
| ! | TACATAACATTCATTCTGTA+TGG | + | chr4.2:173294-173313 | MS.gene93746:intron | 25.0% |
| ! | TAGCCATTTAAATAGATCAT+AGG | - | chr4.2:175749-175768 | None:intergenic | 25.0% |
| ! | TTATTAGCACGTATATTTGT+TGG | - | chr4.2:174336-174355 | None:intergenic | 25.0% |
| !! | AATTTGGATTTTTAATACGG+AGG | + | chr4.2:175239-175258 | MS.gene93746:intron | 25.0% |
| !! | ATAAAAAATAGAGTTTTCGC+AGG | + | chr4.2:175514-175533 | MS.gene93746:intron | 25.0% |
| !! | ATGGTAGAAATTTTATTCCA+AGG | + | chr4.2:176141-176160 | MS.gene93746:intron | 25.0% |
| !! | ATTAAGAATTAGCTTACCAA+CGG | - | chr4.2:173627-173646 | None:intergenic | 25.0% |
| !! | GTTTACTAAATTTTATTCCC+GGG | - | chr4.2:176330-176349 | None:intergenic | 25.0% |
| !! | TTCTGCAACTAATTTGTATA+GGG | - | chr4.2:174386-174405 | None:intergenic | 25.0% |
| !! | TTTCTGCAACTAATTTGTAT+AGG | - | chr4.2:174387-174406 | None:intergenic | 25.0% |
| !!! | ATTATTGTGTTTTGTTGCTA+TGG | + | chr4.2:175457-175476 | MS.gene93746:intron | 25.0% |
| !!! | CCTTACTTAGTACATTTTTT+GGG | - | chr4.2:176063-176082 | None:intergenic | 25.0% |
| !!! | CTTACTTAGTACATTTTTTG+GGG | - | chr4.2:176062-176081 | None:intergenic | 25.0% |
| !!! | GAAAAATTGTTGATTAGCTT+AGG | + | chr4.2:173677-173696 | MS.gene93746:intron | 25.0% |
| !!! | TTAAAATAGGTTGGTACTTA+TGG | - | chr4.2:175352-175371 | None:intergenic | 25.0% |
| !!! | TTACTTAGTACATTTTTTGG+GGG | - | chr4.2:176061-176080 | None:intergenic | 25.0% |
| !!! | TTTTTTTTATTACCATTCCC+CGG | - | chr4.2:176459-176478 | None:intergenic | 25.0% |
| AATTAGTAAGTTGTTATGGG+CGG | + | chr4.2:174029-174048 | MS.gene93746:intron | 30.0% | |
| AGTGTACCAAATTTATTCCT+AGG | + | chr4.2:176097-176116 | MS.gene93746:intron | 30.0% | |
| AGTTTATTGGTGAGTTTCTT+TGG | + | chr4.2:175047-175066 | MS.gene93746:intron | 30.0% | |
| ATAGATATGAGTAGGAAACA+AGG | - | chr4.2:173790-173809 | None:intergenic | 30.0% | |
| ATATTATTTGGGGAATGCAA+AGG | + | chr4.2:173328-173347 | MS.gene93746:intron | 30.0% | |
| ATCACGTAATAGATATGAGT+AGG | - | chr4.2:173798-173817 | None:intergenic | 30.0% | |
| ATTGGAGATGCATATTACTA+TGG | + | chr4.2:174673-174692 | MS.gene93746:CDS | 30.0% | |
| CAATTCAGCATAAAGCTTAA+CGG | - | chr4.2:172779-172798 | None:intergenic | 30.0% | |
| CAGTCATTTATATGAACACT+TGG | + | chr4.2:175930-175949 | MS.gene93746:intron | 30.0% | |
| CATTCTTGAGTACAACATAT+AGG | - | chr4.2:174476-174495 | None:intergenic | 30.0% | |
| CCCAAAAAATGTACTAAGTA+AGG | + | chr4.2:176060-176079 | MS.gene93746:intron | 30.0% | |
| CTATATGTTGTACTCAAGAA+TGG | + | chr4.2:174474-174493 | MS.gene93746:CDS | 30.0% | |
| GCTATTCCTAGGAATAAATT+TGG | - | chr4.2:176106-176125 | None:intergenic | 30.0% | |
| GGCATGTAAATTCTTTATTG+TGG | + | chr4.2:173521-173540 | MS.gene93746:CDS | 30.0% | |
| GGGAATTAGTAAGTTGTTAT+GGG | + | chr4.2:174026-174045 | MS.gene93746:intron | 30.0% | |
| TAAAATAAAAACCATTCCCG+GGG | + | chr4.2:176439-176458 | MS.gene93746:intron | 30.0% | |
| TAAATGACTGAGTTGTGTTA+AGG | - | chr4.2:175920-175939 | None:intergenic | 30.0% | |
| TACAAATTAGTTGCAGAAAG+AGG | + | chr4.2:174388-174407 | MS.gene93746:CDS | 30.0% | |
| TAGCATTCCTTGGAATATAA+TGG | + | chr4.2:176122-176141 | MS.gene93746:intron | 30.0% | |
| TATTATTTGGGGAATGCAAA+GGG | + | chr4.2:173329-173348 | MS.gene93746:intron | 30.0% | |
| TATTCTGCTTATAATGGCAT+CGG | + | chr4.2:173183-173202 | MS.gene93746:CDS | 30.0% | |
| TCCAAGGAACCTTAAAAATA+GGG | + | chr4.2:176201-176220 | MS.gene93746:intron | 30.0% | |
| TGAACATTCAATTTAAGCCA+CGG | + | chr4.2:174742-174761 | MS.gene93746:intron | 30.0% | |
| TGGCAATATGCAATCTAAAA+TGG | + | chr4.2:172637-172656 | MS.gene93746:CDS | 30.0% | |
| TGGGAATTAGTAAGTTGTTA+TGG | + | chr4.2:174025-174044 | MS.gene93746:intron | 30.0% | |
| TTCCAAGGAACCTTAAAAAT+AGG | + | chr4.2:176200-176219 | MS.gene93746:intron | 30.0% | |
| TTGAGACAGAATATCATATC+AGG | - | chr4.2:175723-175742 | None:intergenic | 30.0% | |
| TTGTGCATTAGATTGTGATT+TGG | - | chr4.2:174862-174881 | None:intergenic | 30.0% | |
| ! | AACATTTTCTCCAATGTAGT+GGG | + | chr4.2:175827-175846 | MS.gene93746:intron | 30.0% |
| ! | AATTTTATTCCCATCTCCAT+GGG | + | chr4.2:176246-176265 | MS.gene93746:intron | 30.0% |
| ! | AGTTTTCCAAAAGAAAATGG+TGG | - | chr4.2:176282-176301 | None:intergenic | 30.0% |
| ! | GTTTTCCAAAAGAAAATGGT+GGG | - | chr4.2:176281-176300 | None:intergenic | 30.0% |
| ! | TAATTTTATTCCCATCTCCA+TGG | + | chr4.2:176245-176264 | MS.gene93746:intron | 30.0% |
| ! | TATATTGTCTGTGTTTTCTC+CGG | + | chr4.2:174176-174195 | MS.gene93746:intron | 30.0% |
| ! | TGGAAAACTTTTCTATTTCC+AGG | + | chr4.2:176293-176312 | MS.gene93746:intron | 30.0% |
| ! | TTATTCCCACCATTTTCTTT+TGG | + | chr4.2:176273-176292 | MS.gene93746:intron | 30.0% |
| !! | TAAATTTTAAAAAGCGGGTG+CGG | - | chr4.2:175303-175322 | None:intergenic | 30.0% |
| !!! | CCCTTACTTAGTACATTTTT+TGG | - | chr4.2:176064-176083 | None:intergenic | 30.0% |
| !!! | TTTTTTTATTACCATTCCCC+GGG | - | chr4.2:176458-176477 | None:intergenic | 30.0% |
| AAGCACTCAGAAAGTCTAAA+GGG | + | chr4.2:172890-172909 | MS.gene93746:CDS | 35.0% | |
| AATAAAGTTCCCATGGAGAT+GGG | - | chr4.2:176258-176277 | None:intergenic | 35.0% | |
| ACAATAAGCACATCACAATC+AGG | - | chr4.2:176692-176711 | None:intergenic | 35.0% | |
| ACTGAACCGAACTATAAGTT+TGG | + | chr4.2:173962-173981 | MS.gene93746:intron | 35.0% | |
| AGAAGAGAGAGAAACAACTT+GGG | - | chr4.2:172188-172207 | None:intergenic | 35.0% | |
| AGTAAGCCATTCAAAAGCTT+TGG | - | chr4.2:173142-173161 | None:intergenic | 35.0% | |
| AGTGAAAAGAGATGTCAAGT+TGG | + | chr4.2:173500-173519 | MS.gene93746:CDS | 35.0% | |
| ATCGGTTATTTGTACGTCAA+AGG | + | chr4.2:173201-173220 | MS.gene93746:CDS | 35.0% | |
| ATGAATTATGTGGTACAGAC+CGG | - | chr4.2:174198-174217 | None:intergenic | 35.0% | |
| ATTATTTGGGGAATGCAAAG+GGG | + | chr4.2:173330-173349 | MS.gene93746:intron | 35.0% | |
| CAATGTCAACTTCCACTTAT+TGG | - | chr4.2:175103-175122 | None:intergenic | 35.0% | |
| CACCTCTATTCTGCTTATAA+TGG | + | chr4.2:173177-173196 | MS.gene93746:CDS | 35.0% | |
| CATTATAAGCAGAATAGAGG+TGG | - | chr4.2:173179-173198 | None:intergenic | 35.0% | |
| CTATCCCAAATTAGAAGCTT+GGG | + | chr4.2:176750-176769 | MS.gene93746:CDS | 35.0% | |
| CTTGTCTTTCTCTTATGTCA+GGG | + | chr4.2:174792-174811 | MS.gene93746:intron | 35.0% | |
| TAGAAGAGAGAGAAACAACT+TGG | - | chr4.2:172189-172208 | None:intergenic | 35.0% | |
| TATCATCACTTTGCTTCAGA+GGG | + | chr4.2:172614-172633 | MS.gene93746:CDS | 35.0% | |
| TATTTGTACGTCAAAGGCTA+TGG | + | chr4.2:173207-173226 | MS.gene93746:CDS | 35.0% | |
| TCAACCCAAGCTTCTAATTT+GGG | - | chr4.2:176757-176776 | None:intergenic | 35.0% | |
| TCTATCCCAAATTAGAAGCT+TGG | + | chr4.2:176749-176768 | MS.gene93746:CDS | 35.0% | |
| TCTTGTCTTTCTCTTATGTC+AGG | + | chr4.2:174791-174810 | MS.gene93746:intron | 35.0% | |
| TGCCATTATAAGCAGAATAG+AGG | - | chr4.2:173182-173201 | None:intergenic | 35.0% | |
| TTATCATCACTTTGCTTCAG+AGG | + | chr4.2:172613-172632 | MS.gene93746:CDS | 35.0% | |
| ! | AAAAATAGAGTTTTCGCAGG+TGG | + | chr4.2:175517-175536 | MS.gene93746:intron | 35.0% |
| ! | AAAATAGAGTTTTCGCAGGT+GGG | + | chr4.2:175518-175537 | MS.gene93746:intron | 35.0% |
| ! | AATCAGTGTTAGGGTTTTTG+TGG | + | chr4.2:172546-172565 | MS.gene93746:CDS | 35.0% |
| ! | ACTACACCAAAGCTTTTGAA+TGG | + | chr4.2:173133-173152 | MS.gene93746:CDS | 35.0% |
| ! | AGTTCATTTTCTTTCACCAG+TGG | - | chr4.2:175979-175998 | None:intergenic | 35.0% |
| ! | ATCAGTGTTAGGGTTTTTGT+GGG | + | chr4.2:172547-172566 | MS.gene93746:CDS | 35.0% |
| ! | CAACATTTTCTCCAATGTAG+TGG | + | chr4.2:175826-175845 | MS.gene93746:intron | 35.0% |
| ! | CCACATAATTGATTCTTTGC+CGG | + | chr4.2:176723-176742 | MS.gene93746:CDS | 35.0% |
| ! | CGTTAAGCTTTATGCTGAAT+TGG | + | chr4.2:172777-172796 | MS.gene93746:CDS | 35.0% |
| ! | GGTTTTTCCCCGTTAAAATT+GGG | - | chr4.2:175192-175211 | None:intergenic | 35.0% |
| ! | GTTTTTCCCCGTTAAAATTG+GGG | - | chr4.2:175191-175210 | None:intergenic | 35.0% |
| ! | TCTAATTTGGGATAGACATC+CGG | - | chr4.2:176745-176764 | None:intergenic | 35.0% |
| ! | TTCAAATTTTACCCCCGATA+TGG | + | chr4.2:175591-175610 | MS.gene93746:intron | 35.0% |
| ! | TTCCAGGAACATTTTATACC+CGG | + | chr4.2:176309-176328 | MS.gene93746:intron | 35.0% |
| ! | TTGGATTTTTAATACGGAGG+CGG | + | chr4.2:175242-175261 | MS.gene93746:intron | 35.0% |
| !! | AAATTTTAAAAAGCGGGTGC+GGG | - | chr4.2:175302-175321 | None:intergenic | 35.0% |
| !! | AAGATTTTCCATCTTGGTGT+TGG | + | chr4.2:173585-173604 | MS.gene93746:CDS | 35.0% |
| !! | ATTATACACTGGTTCTGATC+CGG | + | chr4.2:173888-173907 | MS.gene93746:intron | 35.0% |
| !! | GAACATGCTGCTTTACTAAT+TGG | + | chr4.2:174655-174674 | MS.gene93746:CDS | 35.0% |
| !! | GAGAGTATCATATTGACATC+AGG | - | chr4.2:173709-173728 | None:intergenic | 35.0% |
| !! | GCCTTTTAAGTATGCTTCTA+GGG | - | chr4.2:174440-174459 | None:intergenic | 35.0% |
| !!! | AGATTTTCCATCTTGGTGTT+GGG | + | chr4.2:173586-173605 | MS.gene93746:CDS | 35.0% |
| !!! | GGCAAAGGAGTATTTTGAAA+AGG | + | chr4.2:173413-173432 | MS.gene93746:intron | 35.0% |
| !!! | TCCCTATTTTTAAGGTTCCT+TGG | - | chr4.2:176205-176224 | None:intergenic | 35.0% |
| !!! | TTAGTACATTTTTTGGGGGT+GGG | - | chr4.2:176057-176076 | None:intergenic | 35.0% |
| ACAACAGGTAAGTCTAGACA+TGG | - | chr4.2:175674-175693 | None:intergenic | 40.0% | |
| ACAAGACACCCAGGTTATAA+TGG | - | chr4.2:173464-173483 | None:intergenic | 40.0% | |
| ACTTGAAACAAACACACCCT+AGG | + | chr4.2:176410-176429 | MS.gene93746:intron | 40.0% | |
| AGATGCATATTACTATGGCC+GGG | + | chr4.2:174678-174697 | MS.gene93746:CDS | 40.0% | |
| AGCACTCAGAAAGTCTAAAG+GGG | + | chr4.2:172891-172910 | MS.gene93746:CDS | 40.0% | |
| AGCTTCATCATAGTAACGCT+TGG | - | chr4.2:174949-174968 | None:intergenic | 40.0% | |
| ATGGAGTTCTTTGTCCAGAT+GGG | + | chr4.2:174414-174433 | MS.gene93746:CDS | 40.0% | |
| ATTGAAACAGCTGCAGAATC+TGG | + | chr4.2:172509-172528 | MS.gene93746:CDS | 40.0% | |
| CACAAGCCATGTTCAATCTT+GGG | + | chr4.2:174877-174896 | MS.gene93746:CDS | 40.0% | |
| CAGTTTCTTGTGTGAGTTAC+AGG | + | chr4.2:173392-173411 | MS.gene93746:intron | 40.0% | |
| CATGTACCCAAGATTGAACA+TGG | - | chr4.2:174886-174905 | None:intergenic | 40.0% | |
| CCGGCAAAGAATCAATTATG+TGG | - | chr4.2:176726-176745 | None:intergenic | 40.0% | |
| CTCAACCCAAGCTTCTAATT+TGG | - | chr4.2:176758-176777 | None:intergenic | 40.0% | |
| CTTTCAGATTCTCGAGTATC+AGG | + | chr4.2:172927-172946 | MS.gene93746:CDS | 40.0% | |
| GAACCATGCTGACAGTTTAT+TGG | + | chr4.2:175034-175053 | MS.gene93746:CDS | 40.0% | |
| GAATAAAGTTCCCATGGAGA+TGG | - | chr4.2:176259-176278 | None:intergenic | 40.0% | |
| GAGATCTTCTTCGGATTTGT+GGG | - | chr4.2:172348-172367 | None:intergenic | 40.0% | |
| GAGATGCATATTACTATGGC+CGG | + | chr4.2:174677-174696 | MS.gene93746:CDS | 40.0% | |
| GATGCTAGGATCATAGAAGA+GGG | + | chr4.2:172476-172495 | MS.gene93746:CDS | 40.0% | |
| GCATACTTAAAAGGCGATGT+TGG | + | chr4.2:174445-174464 | MS.gene93746:CDS | 40.0% | |
| GCTTGGATTCTCGACAAATA+TGG | + | chr4.2:174532-174551 | MS.gene93746:CDS | 40.0% | |
| GTCTTGTATCTCAAAGGGAT+TGG | + | chr4.2:173477-173496 | MS.gene93746:CDS | 40.0% | |
| TACTCAAGAATGGCTGAGAT+GGG | + | chr4.2:174484-174503 | MS.gene93746:CDS | 40.0% | |
| TCACCAATAAACTGTCAGCA+TGG | - | chr4.2:175040-175059 | None:intergenic | 40.0% | |
| TCGTAGCAACAACCAATAAG+TGG | + | chr4.2:175088-175107 | MS.gene93746:intron | 40.0% | |
| TCTTGGAGAGATATATGCCA+GGG | + | chr4.2:173092-173111 | MS.gene93746:CDS | 40.0% | |
| TGGGTGTCTTGTATCTCAAA+GGG | + | chr4.2:173472-173491 | MS.gene93746:CDS | 40.0% | |
| TTCCAAGGAATGCTATTCCT+AGG | - | chr4.2:176117-176136 | None:intergenic | 40.0% | |
| TTCCTAGGAATAGCATTCCT+TGG | + | chr4.2:176112-176131 | MS.gene93746:intron | 40.0% | |
| TTCGATGACAGGAGAATCTT+TGG | - | chr4.2:172833-172852 | None:intergenic | 40.0% | |
| TTCTTGGAGAGATATATGCC+AGG | + | chr4.2:173091-173110 | MS.gene93746:CDS | 40.0% | |
| ! | AAAACCGATTTAACTGGGTG+CGG | + | chr4.2:175206-175225 | MS.gene93746:intron | 40.0% |
| ! | AAATAGAGTTTTCGCAGGTG+GGG | + | chr4.2:175519-175538 | MS.gene93746:intron | 40.0% |
| ! | AACAGAAGGAGTCGACTTAA+AGG | - | chr4.2:176624-176643 | None:intergenic | 40.0% |
| ! | ATTTTACCCCCGATATGGTT+TGG | + | chr4.2:175596-175615 | MS.gene93746:intron | 40.0% |
| ! | CGGTTTTTCCCCGTTAAAAT+TGG | - | chr4.2:175193-175212 | None:intergenic | 40.0% |
| ! | CTCGCAAAGATTTTCCATCT+TGG | + | chr4.2:173579-173598 | MS.gene93746:CDS | 40.0% |
| ! | GAAGCACTCAGAAAGTCTAA+AGG | + | chr4.2:172889-172908 | MS.gene93746:CDS | 40.0% |
| ! | GAATAGGTCTTTTCAGAGAG+AGG | + | chr4.2:172570-172589 | MS.gene93746:CDS | 40.0% |
| ! | GCCCTAGAAGCATACTTAAA+AGG | + | chr4.2:174436-174455 | MS.gene93746:CDS | 40.0% |
| ! | GGGGAAAAACCGATTTAACT+GGG | + | chr4.2:175201-175220 | MS.gene93746:intron | 40.0% |
| ! | GTCGGTCTCTTTTACTACTT+TGG | + | chr4.2:172982-173001 | MS.gene93746:CDS | 40.0% |
| ! | TCAGTGTTAGGGTTTTTGTG+GGG | + | chr4.2:172548-172567 | MS.gene93746:CDS | 40.0% |
| ! | TCCAGGAACATTTTATACCC+GGG | + | chr4.2:176310-176329 | MS.gene93746:intron | 40.0% |
| ! | TGGATTTTTAATACGGAGGC+GGG | + | chr4.2:175243-175262 | MS.gene93746:intron | 40.0% |
| ! | TTAGGGTTTTTGTGGGGAAT+AGG | + | chr4.2:172554-172573 | MS.gene93746:CDS | 40.0% |
| ! | TTGCAAATTCGGTTCGAAAC+CGG | - | chr4.2:173910-173929 | None:intergenic | 40.0% |
| ! | TTTTACCCCCGATATGGTTT+GGG | + | chr4.2:175597-175616 | MS.gene93746:intron | 40.0% |
| !! | AATTTTAAAAAGCGGGTGCG+GGG | - | chr4.2:175301-175320 | None:intergenic | 40.0% |
| !! | CGCCTTTTAAGTATGCTTCT+AGG | - | chr4.2:174441-174460 | None:intergenic | 40.0% |
| !! | GATTTTGCACTGATGCAGAA+AGG | + | chr4.2:174584-174603 | MS.gene93746:CDS | 40.0% |
| !! | GTTGCTACGAAGTATTGTAG+CGG | - | chr4.2:175078-175097 | None:intergenic | 40.0% |
| !! | TGTGATCGTGAGTTTTTCAG+TGG | + | chr4.2:173817-173836 | MS.gene93746:intron | 40.0% |
| !! | TTCCTCTTTGAAGTCTTCCT+GGG | - | chr4.2:172267-172286 | None:intergenic | 40.0% |
| !! | TTGCTACGAAGTATTGTAGC+GGG | - | chr4.2:175077-175096 | None:intergenic | 40.0% |
| !! | TTTTACTACTTTGGCCTTCG+TGG | + | chr4.2:172991-173010 | MS.gene93746:CDS | 40.0% |
| !!! | CTTAGTACATTTTTTGGGGG+TGG | - | chr4.2:176058-176077 | None:intergenic | 40.0% |
| !!! | TTGGGTTGAGAATGTGCTTT+TGG | + | chr4.2:176768-176787 | MS.gene93746:CDS | 40.0% |
| AGAGAGAGAAACAACTTGGG+TGG | - | chr4.2:172185-172204 | None:intergenic | 45.0% | |
| AGCAGAATAGAGGTGGTGTT+TGG | - | chr4.2:173172-173191 | None:intergenic | 45.0% | |
| AGTAACGCTTGGCTAGATGA+AGG | - | chr4.2:174938-174957 | None:intergenic | 45.0% | |
| ATTCCCAAAAGATGCCTCCT+AGG | - | chr4.2:174012-174031 | None:intergenic | 45.0% | |
| CAGAAAGTCTAAAGGGGAAG+AGG | + | chr4.2:172897-172916 | MS.gene93746:CDS | 45.0% | |
| CAGGCACACCAAGTTCATTA+GGG | - | chr4.2:176912-176931 | None:intergenic | 45.0% | |
| CATCTGGACAAAGAACTCCA+TGG | - | chr4.2:174415-174434 | None:intergenic | 45.0% | |
| CATGGAGTTCTTTGTCCAGA+TGG | + | chr4.2:174413-174432 | MS.gene93746:CDS | 45.0% | |
| CCAAATCGCCCTAATGAACT+TGG | + | chr4.2:176901-176920 | MS.gene93746:CDS | 45.0% | |
| CCAAGTTCATTAGGGCGATT+TGG | - | chr4.2:176904-176923 | None:intergenic | 45.0% | |
| CGAGATCTTCTTCGGATTTG+TGG | - | chr4.2:172349-172368 | None:intergenic | 45.0% | |
| CTCTTACAAGCTTGTGGGTT+CGG | + | chr4.2:175009-175028 | MS.gene93746:CDS | 45.0% | |
| CTGGGTGTCTTGTATCTCAA+AGG | + | chr4.2:173471-173490 | MS.gene93746:CDS | 45.0% | |
| CTTAAAAGGCGATGTTGGCA+AGG | + | chr4.2:174450-174469 | MS.gene93746:CDS | 45.0% | |
| CTTGGAGAGATATATGCCAG+GGG | + | chr4.2:173093-173112 | MS.gene93746:CDS | 45.0% | |
| CTTGTGTGAGTTACAGGCAA+AGG | + | chr4.2:173398-173417 | MS.gene93746:intron | 45.0% | |
| GAACCTGTTAGGCTACACAA+TGG | + | chr4.2:172850-172869 | MS.gene93746:CDS | 45.0% | |
| GATGGAAAATCTTTGCGAGC+TGG | - | chr4.2:173578-173597 | None:intergenic | 45.0% | |
| GCACAAGCCATGTTCAATCT+TGG | + | chr4.2:174876-174895 | MS.gene93746:CDS | 45.0% | |
| GCTGCTGCTATGTACAAAGT+CGG | + | chr4.2:172964-172983 | MS.gene93746:CDS | 45.0% | |
| GGATGCTAGGATCATAGAAG+AGG | + | chr4.2:172475-172494 | MS.gene93746:CDS | 45.0% | |
| GGTAAGTCTAGACATGGCAA+CGG | - | chr4.2:175668-175687 | None:intergenic | 45.0% | |
| GTAAGTCTAGACATGGCAAC+GGG | - | chr4.2:175667-175686 | None:intergenic | 45.0% | |
| GTACTCAAGAATGGCTGAGA+TGG | + | chr4.2:174483-174502 | MS.gene93746:CDS | 45.0% | |
| GTCTGATAGGACAATTCCAC+TGG | + | chr4.2:175960-175979 | MS.gene93746:intron | 45.0% | |
| GTTCAAGAAGAACGTTCCGT+TGG | + | chr4.2:173608-173627 | MS.gene93746:CDS | 45.0% | |
| GTTGGAGGCCATTATAACCT+GGG | + | chr4.2:173453-173472 | MS.gene93746:CDS | 45.0% | |
| TAAAAACCATTCCCGGGGAA+TGG | + | chr4.2:176444-176463 | MS.gene93746:intron | 45.0% | |
| TAAGTCTAGACATGGCAACG+GGG | - | chr4.2:175666-175685 | None:intergenic | 45.0% | |
| TAGTTGCAGAAAGAGGTCCA+TGG | + | chr4.2:174395-174414 | MS.gene93746:CDS | 45.0% | |
| TCCAAAGTCAATCGCATACC+CGG | - | chr4.2:174699-174718 | None:intergenic | 45.0% | |
| TCCCGGGTATAAAATGTTCC+TGG | - | chr4.2:176314-176333 | None:intergenic | 45.0% | |
| TCCTAACTGTGCTGTATCTG+CGG | + | chr4.2:176830-176849 | MS.gene93746:CDS | 45.0% | |
| TCTTGAACCCAACACCAAGA+TGG | - | chr4.2:173596-173615 | None:intergenic | 45.0% | |
| TGGTGGGAATAAAGTTCCCA+TGG | - | chr4.2:176265-176284 | None:intergenic | 45.0% | |
| TGGTTGAGGGTTCGAAGATT+TGG | - | chr4.2:172388-172407 | None:intergenic | 45.0% | |
| TTATTACCATTCCCCGGGAA+TGG | - | chr4.2:176453-176472 | None:intergenic | 45.0% | |
| TTCCCAAAAGATGCCTCCTA+GGG | - | chr4.2:174011-174030 | None:intergenic | 45.0% | |
| TTCCCAGGAAGACTTCAAAG+AGG | + | chr4.2:172262-172281 | MS.gene93746:CDS | 45.0% | |
| TTCCTTAAGGCTGTCGACAA+AGG | + | chr4.2:173048-173067 | MS.gene93746:CDS | 45.0% | |
| TTGGCTAGATGAAGGTCAAG+AGG | - | chr4.2:174930-174949 | None:intergenic | 45.0% | |
| TTTACCCCCGATATGGTTTG+GGG | + | chr4.2:175598-175617 | MS.gene93746:intron | 45.0% | |
| TTTATTGTGGCTGCCAACCA+CGG | + | chr4.2:173534-173553 | MS.gene93746:CDS | 45.0% | |
| TTTCCCCGTTAAAATTGGGG+CGG | - | chr4.2:175188-175207 | None:intergenic | 45.0% | |
| ! | AAACCGATTTAACTGGGTGC+GGG | + | chr4.2:175207-175226 | MS.gene93746:intron | 45.0% |
| ! | AAAGGCTGCTGATAACGAAG+AGG | + | chr4.2:173431-173450 | MS.gene93746:CDS | 45.0% |
| ! | AATAGAGTTTTCGCAGGTGG+GGG | + | chr4.2:175520-175539 | MS.gene93746:intron | 45.0% |
| ! | ACTGGCTCTTACAAGCTTGT+GGG | + | chr4.2:175004-175023 | MS.gene93746:CDS | 45.0% |
| ! | ACTTGGAGCGTTTGTCTGAT+AGG | + | chr4.2:175947-175966 | MS.gene93746:intron | 45.0% |
| ! | AGTCGACTTAAAGGCAAGTC+AGG | - | chr4.2:176615-176634 | None:intergenic | 45.0% |
| ! | CGGGGAAAAACCGATTTAAC+TGG | + | chr4.2:175200-175219 | MS.gene93746:intron | 45.0% |
| ! | GAAGACAACTTGCTCTCTGT+AGG | + | chr4.2:174051-174070 | MS.gene93746:intron | 45.0% |
| ! | GATTTTTAATACGGAGGCGG+GGG | + | chr4.2:175245-175264 | MS.gene93746:intron | 45.0% |
| ! | GGATTTTTAATACGGAGGCG+GGG | + | chr4.2:175244-175263 | MS.gene93746:intron | 45.0% |
| ! | GGTTGAGAATGTGCTTTTGG+AGG | + | chr4.2:176771-176790 | MS.gene93746:CDS | 45.0% |
| ! | TGTAGTTAAAGAGTGCACCG+TGG | - | chr4.2:174762-174781 | None:intergenic | 45.0% |
| ! | TTTGAGGCGTGACCATTCTA+AGG | + | chr4.2:173014-173033 | MS.gene93746:CDS | 45.0% |
| !! | ACCATGAGAGTGCCTTAGAA+TGG | - | chr4.2:173029-173048 | None:intergenic | 45.0% |
| !! | ACCATTCTAAGGCACTCTCA+TGG | + | chr4.2:173025-173044 | MS.gene93746:CDS | 45.0% |
| !! | CTTCCTCTTTGAAGTCTTCC+TGG | - | chr4.2:172268-172287 | None:intergenic | 45.0% |
| !! | CTTTGAAGTCTTCCTGGGAA+AGG | - | chr4.2:172262-172281 | None:intergenic | 45.0% |
| !! | CTTTGAGATACAAGACACCC+AGG | - | chr4.2:173473-173492 | None:intergenic | 45.0% |
| !! | GAGAATGTGCTTTTGGAGGA+GGG | + | chr4.2:176775-176794 | MS.gene93746:CDS | 45.0% |
| !! | TGAGAATGTGCTTTTGGAGG+AGG | + | chr4.2:176774-176793 | MS.gene93746:CDS | 45.0% |
| !! | TAAATAAAAATAATATTCAT+TGG | - | chr4.2:176563-176582 | None:intergenic | 5.0% |
| !!! | AATTTTTTAATAATAATCAA+AGG | + | chr4.2:176021-176040 | MS.gene93746:intron | 5.0% |
| !!! | ATTTTTTAATAATAATCAAA+GGG | + | chr4.2:176022-176041 | MS.gene93746:intron | 5.0% |
| AAGAGGAATCGGAATCAGCG+GGG | - | chr4.2:172292-172311 | None:intergenic | 50.0% | |
| AAGATCTCGATCCTGGCTCA+TGG | + | chr4.2:172360-172379 | MS.gene93746:CDS | 50.0% | |
| ACACCCGCACCCAGTTAAAT+CGG | - | chr4.2:175213-175232 | None:intergenic | 50.0% | |
| AGAAAGCCTTTGGTTGACCG+TGG | - | chr4.2:173554-173573 | None:intergenic | 50.0% | |
| AGATTATGACCGAGCTGCTG+AGG | + | chr4.2:174824-174843 | MS.gene93746:CDS | 50.0% | |
| AGCAGCAGCATTCCCTTTCT+GGG | - | chr4.2:172953-172972 | None:intergenic | 50.0% | |
| AGCAGCTCGGTCATAATCTC+TGG | - | chr4.2:174823-174842 | None:intergenic | 50.0% | |
| AGCATGTGCATGGGTGAATC+TGG | + | chr4.2:174562-174581 | MS.gene93746:CDS | 50.0% | |
| AGCCTAACAGGTTCGATGAC+AGG | - | chr4.2:172844-172863 | None:intergenic | 50.0% | |
| AGCTAAGTTGCCAGTCACAC+TGG | + | chr4.2:174986-175005 | MS.gene93746:CDS | 50.0% | |
| AGCTAATGACTGGGGATGCT+AGG | + | chr4.2:172462-172481 | MS.gene93746:CDS | 50.0% | |
| AGCTGTTGTTGTAGCTGGAG+AGG | + | chr4.2:176870-176889 | MS.gene93746:CDS | 50.0% | |
| AGGATCATAGAAGAGGGCTC+CGG | + | chr4.2:172482-172501 | MS.gene93746:CDS | 50.0% | |
| AGGCAAGCTGTTGTTGTAGC+TGG | + | chr4.2:176865-176884 | MS.gene93746:CDS | 50.0% | |
| ATCAGCGGGCACATTCTTTG+TGG | + | chr4.2:174608-174627 | MS.gene93746:CDS | 50.0% | |
| ATTTAACTGGGTGCGGGTGT+GGG | + | chr4.2:175213-175232 | MS.gene93746:intron | 50.0% | |
| CATCACTTTGCTTCAGAGGG+TGG | + | chr4.2:172617-172636 | MS.gene93746:CDS | 50.0% | |
| CCAAGAAGTTCCATAGAGCG+AGG | - | chr4.2:173078-173097 | None:intergenic | 50.0% | |
| CCGTCGCTAAGCTAATGACT+GGG | + | chr4.2:172453-172472 | MS.gene93746:CDS | 50.0% | |
| CCTAACTGTGCTGTATCTGC+GGG | + | chr4.2:176831-176850 | MS.gene93746:CDS | 50.0% | |
| CCTCGCTCTATGGAACTTCT+TGG | + | chr4.2:173075-173094 | MS.gene93746:CDS | 50.0% | |
| CGGCTGCACAATCAGTGTTA+GGG | + | chr4.2:172537-172556 | MS.gene93746:CDS | 50.0% | |
| CGTCGCTAAGCTAATGACTG+GGG | + | chr4.2:172454-172473 | MS.gene93746:CDS | 50.0% | |
| CTCCTGTCATCGAACCTGTT+AGG | + | chr4.2:172839-172858 | MS.gene93746:CDS | 50.0% | |
| CTCCTTTGTCGACAGCCTTA+AGG | - | chr4.2:173053-173072 | None:intergenic | 50.0% | |
| CTTGAACCATTCACACCCCT+AGG | + | chr4.2:173992-174011 | MS.gene93746:intron | 50.0% | |
| CTTGGGTACATGCATGAGCA+TGG | + | chr4.2:174894-174913 | MS.gene93746:CDS | 50.0% | |
| CTTGTAAGAGCCAGTGTGAC+TGG | - | chr4.2:174999-175018 | None:intergenic | 50.0% | |
| GAAGAGGAATCGGAATCAGC+GGG | - | chr4.2:172293-172312 | None:intergenic | 50.0% | |
| GAAGGTCAAGAGGAAGTCCT+TGG | - | chr4.2:174920-174939 | None:intergenic | 50.0% | |
| GCAGATACAGCACAGTTAGG+AGG | - | chr4.2:176831-176850 | None:intergenic | 50.0% | |
| GCAGGCACACCAAGTTCATT+AGG | - | chr4.2:176913-176932 | None:intergenic | 50.0% | |
| GCCAGGATCGAGATCTTCTT+CGG | - | chr4.2:172357-172376 | None:intergenic | 50.0% | |
| GCGTCTCAGTTACCTCAACA+TGG | + | chr4.2:175147-175166 | MS.gene93746:intron | 50.0% | |
| GCTCCATTGTGTAGCCTAAC+AGG | - | chr4.2:172856-172875 | None:intergenic | 50.0% | |
| GGAAGAGGAATCGGAATCAG+CGG | - | chr4.2:172294-172313 | None:intergenic | 50.0% | |
| GGAGAACGAAGCATGTGCAT+GGG | + | chr4.2:174553-174572 | MS.gene93746:CDS | 50.0% | |
| GGCACTCTCATGGTTCCTTA+AGG | + | chr4.2:173035-173054 | MS.gene93746:CDS | 50.0% | |
| GGTTGGAGGCCATTATAACC+TGG | + | chr4.2:173452-173471 | MS.gene93746:CDS | 50.0% | |
| GTCACCGAATTCATCCCACT+CGG | - | chr4.2:172318-172337 | None:intergenic | 50.0% | |
| TACATGCATGAGCATGGCCA+AGG | + | chr4.2:174900-174919 | MS.gene93746:CDS | 50.0% | |
| TAGCAGCAGCATTCCCTTTC+TGG | - | chr4.2:172954-172973 | None:intergenic | 50.0% | |
| TCCCAAAAGATGCCTCCTAG+GGG | - | chr4.2:174010-174029 | None:intergenic | 50.0% | |
| TCCGAAGAAGATCTCGATCC+TGG | + | chr4.2:172353-172372 | MS.gene93746:CDS | 50.0% | |
| TCGAGTATCAGGCCCAGAAA+GGG | + | chr4.2:172938-172957 | MS.gene93746:CDS | 50.0% | |
| TGAGTTGCTGCCCACTACAT+TGG | - | chr4.2:175840-175859 | None:intergenic | 50.0% | |
| TGGAGAACGAAGCATGTGCA+TGG | + | chr4.2:174552-174571 | MS.gene93746:CDS | 50.0% | |
| TGGGAAAGGACGAGAACGTA+GGG | - | chr4.2:172248-172267 | None:intergenic | 50.0% | |
| TTCCCCGTTAAAATTGGGGC+GGG | - | chr4.2:175187-175206 | None:intergenic | 50.0% | |
| ! | ACTTTGGCCTTCGTGGTTTG+AGG | + | chr4.2:172998-173017 | MS.gene93746:CDS | 50.0% |
| ! | AGTCATTAGCTTAGCGACGG+CGG | - | chr4.2:172453-172472 | None:intergenic | 50.0% |
| ! | AGTTAGGAGGCACGCAAAGA+GGG | - | chr4.2:176818-176837 | None:intergenic | 50.0% |
| ! | CCCAGTCATTAGCTTAGCGA+CGG | - | chr4.2:172456-172475 | None:intergenic | 50.0% |
| ! | CCTAACACTGATTGTGCAGC+CGG | - | chr4.2:172539-172558 | None:intergenic | 50.0% |
| ! | CGGCTTTTGTTGCCATGTTG+AGG | - | chr4.2:175162-175181 | None:intergenic | 50.0% |
| ! | CTAACACTGATTGTGCAGCC+GGG | - | chr4.2:172538-172557 | None:intergenic | 50.0% |
| ! | GCTGATAACGAAGAGGTTGG+AGG | + | chr4.2:173438-173457 | MS.gene93746:CDS | 50.0% |
| ! | GCTGCTGATAACGAAGAGGT+TGG | + | chr4.2:173435-173454 | MS.gene93746:CDS | 50.0% |
| ! | GTCGGTATCGGATTGGGATT+GGG | - | chr4.2:172417-172436 | None:intergenic | 50.0% |
| ! | TCGGTATCGGATTGGGATTG+GGG | - | chr4.2:172416-172435 | None:intergenic | 50.0% |
| ! | TGCAGCTGTTTCAATCTCGC+CGG | - | chr4.2:172504-172523 | None:intergenic | 50.0% |
| !! | AATGGCTGAGATGGGCTATG+AGG | + | chr4.2:174492-174511 | MS.gene93746:CDS | 50.0% |
| !! | CACTGGCTCTTACAAGCTTG+TGG | + | chr4.2:175003-175022 | MS.gene93746:CDS | 50.0% |
| !! | CTGATGCAGAAAGGCATCAG+CGG | + | chr4.2:174593-174612 | MS.gene93746:CDS | 50.0% |
| !! | GTAGTAGAGAGCGTCGGTAT+CGG | - | chr4.2:172429-172448 | None:intergenic | 50.0% |
| !! | TGATGCAGAAAGGCATCAGC+GGG | + | chr4.2:174594-174613 | MS.gene93746:CDS | 50.0% |
| !!! | ACCCCTAGGAGGCATCTTTT+GGG | + | chr4.2:174006-174025 | MS.gene93746:intron | 50.0% |
| AAGATTTGGCGCCATGAGCC+AGG | - | chr4.2:172374-172393 | None:intergenic | 55.0% | |
| ACCGAATTCATCCCACTCGG+CGG | - | chr4.2:172315-172334 | None:intergenic | 55.0% | |
| AGCCTTTGGTTGACCGTGGT+TGG | - | chr4.2:173550-173569 | None:intergenic | 55.0% | |
| AGCGGGCACATTCTTTGTGG+TGG | + | chr4.2:174611-174630 | MS.gene93746:CDS | 55.0% | |
| AGCTGCAGAATCTGGTCACC+CGG | + | chr4.2:172517-172536 | MS.gene93746:CDS | 55.0% | |
| ATCTGCGGGAGAGGCAAAGA+AGG | + | chr4.2:176845-176864 | MS.gene93746:CDS | 55.0% | |
| CAAAGGAGAGCCTCGCTCTA+TGG | + | chr4.2:173065-173084 | MS.gene93746:CDS | 55.0% | |
| CCATCCCCAAACCATATCGG+GGG | - | chr4.2:175605-175624 | None:intergenic | 55.0% | |
| CCCATCCCCAAACCATATCG+GGG | - | chr4.2:175606-175625 | None:intergenic | 55.0% | |
| CCCCATCCCCAAACCATATC+GGG | - | chr4.2:175607-175626 | None:intergenic | 55.0% | |
| CCCCCATCCCCAAACCATAT+CGG | - | chr4.2:175608-175627 | None:intergenic | 55.0% | |
| CCCGCAGATACAGCACAGTT+AGG | - | chr4.2:176834-176853 | None:intergenic | 55.0% | |
| CCGGCTGCACAATCAGTGTT+AGG | + | chr4.2:172536-172555 | MS.gene93746:CDS | 55.0% | |
| CTACGTTCTCGTCCTTTCCC+AGG | + | chr4.2:172247-172266 | MS.gene93746:CDS | 55.0% | |
| CTCGAGTATCAGGCCCAGAA+AGG | + | chr4.2:172937-172956 | MS.gene93746:CDS | 55.0% | |
| CTGGGAAAGGACGAGAACGT+AGG | - | chr4.2:172249-172268 | None:intergenic | 55.0% | |
| GAACCATTCACACCCCTAGG+AGG | + | chr4.2:173995-174014 | MS.gene93746:intron | 55.0% | |
| GAGATATATGCCAGGGGAGC+AGG | + | chr4.2:173099-173118 | MS.gene93746:CDS | 55.0% | |
| GATTTAACTGGGTGCGGGTG+TGG | + | chr4.2:175212-175231 | MS.gene93746:intron | 55.0% | |
| GCATGTAAGCCTCAGCAGCT+CGG | - | chr4.2:174836-174855 | None:intergenic | 55.0% | |
| GCCGTCGCTAAGCTAATGAC+TGG | + | chr4.2:172452-172471 | MS.gene93746:CDS | 55.0% | |
| GCGAGCTGGTAGAAAGCCTT+TGG | - | chr4.2:173564-173583 | None:intergenic | 55.0% | |
| GTGACTGGCAACTTAGCTGC+AGG | - | chr4.2:174984-175003 | None:intergenic | 55.0% | |
| TCCCCGTTAAAATTGGGGCG+GGG | - | chr4.2:175186-175205 | None:intergenic | 55.0% | |
| TCCGCCGAGTGGGATGAATT+CGG | + | chr4.2:172311-172330 | MS.gene93746:CDS | 55.0% | |
| TGCCAACCACGGTCAACCAA+AGG | + | chr4.2:173545-173564 | MS.gene93746:CDS | 55.0% | |
| TGGCACAGAGCAATGCTGCT+TGG | + | chr4.2:174515-174534 | MS.gene93746:CDS | 55.0% | |
| TGGTGGCAAGCTTCTGAGCA+GGG | + | chr4.2:174628-174647 | MS.gene93746:CDS | 55.0% | |
| TTTAAAAAGCGGGTGCGGGG+CGG | - | chr4.2:175298-175317 | None:intergenic | 55.0% | |
| TTTAACTGGGTGCGGGTGTG+GGG | + | chr4.2:175214-175233 | MS.gene93746:intron | 55.0% | |
| ! | ATATGGTTTGGGGATGGGGG+CGG | + | chr4.2:175608-175627 | MS.gene93746:intron | 55.0% |
| ! | ATCGGATTGGGATTGGGGGT+CGG | - | chr4.2:172411-172430 | None:intergenic | 55.0% |
| ! | ATGCCTCCTAGGGGTGTGAA+TGG | - | chr4.2:174001-174020 | None:intergenic | 55.0% |
| ! | CAGTTAGGAGGCACGCAAAG+AGG | - | chr4.2:176819-176838 | None:intergenic | 55.0% |
| ! | CCCCGATATGGTTTGGGGAT+GGG | + | chr4.2:175603-175622 | MS.gene93746:intron | 55.0% |
| ! | CCCGATATGGTTTGGGGATG+GGG | + | chr4.2:175604-175623 | MS.gene93746:intron | 55.0% |
| ! | CCGATATGGTTTGGGGATGG+GGG | + | chr4.2:175605-175624 | MS.gene93746:intron | 55.0% |
| ! | CGGTATCGGATTGGGATTGG+GGG | - | chr4.2:172415-172434 | None:intergenic | 55.0% |
| ! | CGTCGGTATCGGATTGGGAT+TGG | - | chr4.2:172418-172437 | None:intergenic | 55.0% |
| ! | GCCGGGTATGCGATTGACTT+TGG | + | chr4.2:174695-174714 | MS.gene93746:intron | 55.0% |
| ! | TCTGTAGGAGCGTAGCTCTG+TGG | + | chr4.2:174066-174085 | MS.gene93746:intron | 55.0% |
| !! | AGAGAGCGTCGGTATCGGAT+TGG | - | chr4.2:172424-172443 | None:intergenic | 55.0% |
| !! | GAGAGCGTCGGTATCGGATT+GGG | - | chr4.2:172423-172442 | None:intergenic | 55.0% |
| !! | GTATGCTTCTAGGGCCCATC+TGG | - | chr4.2:174431-174450 | None:intergenic | 55.0% |
| !!! | CACCCCTAGGAGGCATCTTT+TGG | + | chr4.2:174005-174024 | MS.gene93746:intron | 55.0% |
| ACATGGCAACGGGGCAGATC+GGG | - | chr4.2:175657-175676 | None:intergenic | 60.0% | |
| CCACTCGGCGGAAGAGGAAT+CGG | - | chr4.2:172303-172322 | None:intergenic | 60.0% | |
| CCCCGTTAAAATTGGGGCGG+GGG | - | chr4.2:175185-175204 | None:intergenic | 60.0% | |
| CGATTCCTCTTCCGCCGAGT+GGG | + | chr4.2:172301-172320 | MS.gene93746:CDS | 60.0% | |
| CGTTAAAATTGGGGCGGGGG+CGG | - | chr4.2:175182-175201 | None:intergenic | 60.0% | |
| CTGTGCTGTATCTGCGGGAG+AGG | + | chr4.2:176836-176855 | MS.gene93746:CDS | 60.0% | |
| GACATGGCAACGGGGCAGAT+CGG | - | chr4.2:175658-175677 | None:intergenic | 60.0% | |
| GACGAGAACGTAGGGACGAG+CGG | - | chr4.2:172240-172259 | None:intergenic | 60.0% | |
| GATTGGGGGTCGGTGGTTGA+GGG | - | chr4.2:172401-172420 | None:intergenic | 60.0% | |
| GGTCACGCCTCAAACCACGA+AGG | - | chr4.2:173008-173027 | None:intergenic | 60.0% | |
| GTGCGGGTGTGGGGGAAATT+TGG | + | chr4.2:175223-175242 | MS.gene93746:intron | 60.0% | |
| GTGGTGGCAAGCTTCTGAGC+AGG | + | chr4.2:174627-174646 | MS.gene93746:CDS | 60.0% | |
| TCTCTCAACACCTGCTCCCC+TGG | - | chr4.2:173112-173131 | None:intergenic | 60.0% | |
| TTAAAAAGCGGGTGCGGGGC+GGG | - | chr4.2:175297-175316 | None:intergenic | 60.0% | |
| TTAACTGGGTGCGGGTGTGG+GGG | + | chr4.2:175215-175234 | MS.gene93746:intron | 60.0% | |
| TTCATCCCACTCGGCGGAAG+AGG | - | chr4.2:172309-172328 | None:intergenic | 60.0% | |
| ! | AGAGTTTTCGCAGGTGGGGG+CGG | + | chr4.2:175523-175542 | MS.gene93746:intron | 60.0% |
| ! | CCCCCGATATGGTTTGGGGA+TGG | + | chr4.2:175602-175621 | MS.gene93746:intron | 60.0% |
| ! | CGCCCCCGCCCCAATTTTAA+CGG | + | chr4.2:175180-175199 | MS.gene93746:intron | 60.0% |
| ! | GGCGGAGTAGTAGAGAGCGT+CGG | - | chr4.2:172435-172454 | None:intergenic | 60.0% |
| ! | TATGGTTTGGGGATGGGGGC+GGG | + | chr4.2:175609-175628 | MS.gene93746:intron | 60.0% |
| !! | CCCCCGCCCCAATTTTAACG+GGG | + | chr4.2:175182-175201 | MS.gene93746:intron | 60.0% |
| !! | GCCCCCGCCCCAATTTTAAC+GGG | + | chr4.2:175181-175200 | MS.gene93746:intron | 60.0% |
| !! | GGCTGAGATGGGCTATGAGG+TGG | + | chr4.2:174495-174514 | MS.gene93746:CDS | 60.0% |
| AACGTAGGGACGAGCGGCGA+CGG | - | chr4.2:172234-172253 | None:intergenic | 65.0% | |
| ATGGCAACGGGGCAGATCGG+GGG | - | chr4.2:175655-175674 | None:intergenic | 65.0% | |
| CATGGCAACGGGGCAGATCG+GGG | - | chr4.2:175656-175675 | None:intergenic | 65.0% | |
| CCGATTCCTCTTCCGCCGAG+TGG | + | chr4.2:172300-172319 | MS.gene93746:CDS | 65.0% | |
| GGATTGGGATTGGGGGTCGG+TGG | - | chr4.2:172408-172427 | None:intergenic | 65.0% | |
| GGATTGGGGGTCGGTGGTTG+AGG | - | chr4.2:172402-172421 | None:intergenic | 65.0% | |
| TAAAAAGCGGGTGCGGGGCG+GGG | - | chr4.2:175296-175315 | None:intergenic | 65.0% | |
| ! | AGTTTTCGCAGGTGGGGGCG+GGG | + | chr4.2:175525-175544 | MS.gene93746:intron | 65.0% |
| ! | ATGGTTTGGGGATGGGGGCG+GGG | + | chr4.2:175610-175629 | MS.gene93746:intron | 65.0% |
| ! | GAGTTTTCGCAGGTGGGGGC+GGG | + | chr4.2:175524-175543 | MS.gene93746:intron | 65.0% |
| AAAAAGCGGGTGCGGGGCGG+GGG | - | chr4.2:175295-175314 | None:intergenic | 70.0% | |
| AACCCCGCCCCCAATGGGGA+CGG | - | chr4.2:175566-175585 | None:intergenic | 70.0% | |
| ACACCCAACCCCGCCCCCAA+TGG | - | chr4.2:175572-175591 | None:intergenic | 70.0% | |
| ACCCAACCCCGCCCCCAATG+GGG | - | chr4.2:175570-175589 | None:intergenic | 70.0% | |
| AGACCCGTCCCCATTGGGGG+CGG | + | chr4.2:175559-175578 | MS.gene93746:intron | 70.0% | |
| CACCCAACCCCGCCCCCAAT+GGG | - | chr4.2:175571-175590 | None:intergenic | 70.0% | |
| CCCAATGGGGACGGGTCTCC+CGG | - | chr4.2:175557-175576 | None:intergenic | 70.0% | |
| CCGGGAGACCCGTCCCCATT+GGG | + | chr4.2:175554-175573 | MS.gene93746:intron | 70.0% | |
| CGGGAGACCCGTCCCCATTG+GGG | + | chr4.2:175555-175574 | MS.gene93746:intron | 70.0% | |
| GGGAGACCCGTCCCCATTGG+GGG | + | chr4.2:175556-175575 | MS.gene93746:intron | 70.0% | |
| TCCCCATTGGGGGCGGGGTT+GGG | + | chr4.2:175566-175585 | MS.gene93746:intron | 70.0% | |
| ! | GTTTTCGCAGGTGGGGGCGG+GGG | + | chr4.2:175526-175545 | MS.gene93746:intron | 70.0% |
| ! | TGGTTTGGGGATGGGGGCGG+GGG | + | chr4.2:175611-175630 | MS.gene93746:intron | 70.0% |
| ACCCCGCCCCCAATGGGGAC+GGG | - | chr4.2:175565-175584 | None:intergenic | 75.0% | |
| ACCCGTCCCCATTGGGGGCG+GGG | + | chr4.2:175561-175580 | MS.gene93746:intron | 75.0% | |
| AGGGACGAGCGGCGACGGAG+AGG | - | chr4.2:172229-172248 | None:intergenic | 75.0% | |
| CAACGGGGCAGATCGGGGGC+GGG | - | chr4.2:175651-175670 | None:intergenic | 75.0% | |
| GACCCGTCCCCATTGGGGGC+GGG | + | chr4.2:175560-175579 | MS.gene93746:intron | 75.0% | |
| GCAACGGGGCAGATCGGGGG+CGG | - | chr4.2:175652-175671 | None:intergenic | 75.0% | |
| GCCGGGAGACCCGTCCCCAT+TGG | + | chr4.2:175553-175572 | MS.gene93746:intron | 75.0% | |
| GGGACGAGCGGCGACGGAGA+GGG | - | chr4.2:172228-172247 | None:intergenic | 75.0% | |
| GTCCCCATTGGGGGCGGGGT+TGG | + | chr4.2:175565-175584 | MS.gene93746:intron | 75.0% | |
| TTTGGGGATGGGGGCGGGGG+CGG | + | chr4.2:175614-175633 | MS.gene93746:intron | 75.0% | |
| ! | TTCGCAGGTGGGGGCGGGGG+CGG | + | chr4.2:175529-175548 | MS.gene93746:intron | 80.0% |
| ! | TTGGGGATGGGGGCGGGGGC+GGG | + | chr4.2:175615-175634 | MS.gene93746:intron | 80.0% |
| ! | AAGCGGGTGCGGGGCGGGGG+TGG | - | chr4.2:175292-175311 | None:intergenic | 85.0% |
| ! | AGCGGGTGCGGGGCGGGGGT+GGG | - | chr4.2:175291-175310 | None:intergenic | 85.0% |
| ! | GCGGGGCGGGGGTGGGTGCA+GGG | - | chr4.2:175284-175303 | None:intergenic | 85.0% |
| ! | GGGCGGGGGTGGGTGCAGGG+CGG | - | chr4.2:175281-175300 | None:intergenic | 85.0% |
| ! | TCGCAGGTGGGGGCGGGGGC+GGG | + | chr4.2:175530-175549 | MS.gene93746:intron | 85.0% |
| ! | TGCGGGGCGGGGGTGGGTGC+AGG | - | chr4.2:175285-175304 | None:intergenic | 85.0% |
| ! | TGGGGATGGGGGCGGGGGCG+GGG | + | chr4.2:175616-175635 | MS.gene93746:intron | 85.0% |
| ! | CGCAGGTGGGGGCGGGGGCG+GGG | + | chr4.2:175531-175550 | MS.gene93746:intron | 90.0% |
| ! | GGTGGGGGCGGGGGCGGGGC+CGG | + | chr4.2:175535-175554 | MS.gene93746:intron | 95.0% |
| ! | GTGGGGGCGGGGGCGGGGCC+GGG | + | chr4.2:175536-175555 | MS.gene93746:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 172179 | 176942 | 172179 | ID=MS.gene93746 |
| chr4.2 | mRNA | 172179 | 176942 | 172179 | ID=MS.gene93746.t1;Parent=MS.gene93746 |
| chr4.2 | exon | 172179 | 172688 | 172179 | ID=MS.gene93746.t1.exon1;Parent=MS.gene93746.t1 |
| chr4.2 | CDS | 172179 | 172688 | 172179 | ID=cds.MS.gene93746.t1;Parent=MS.gene93746.t1 |
| chr4.2 | exon | 172763 | 173254 | 172763 | ID=MS.gene93746.t1.exon2;Parent=MS.gene93746.t1 |
| chr4.2 | CDS | 172763 | 173254 | 172763 | ID=cds.MS.gene93746.t1;Parent=MS.gene93746.t1 |
| chr4.2 | exon | 173414 | 173629 | 173414 | ID=MS.gene93746.t1.exon3;Parent=MS.gene93746.t1 |
| chr4.2 | CDS | 173414 | 173629 | 173414 | ID=cds.MS.gene93746.t1;Parent=MS.gene93746.t1 |
| chr4.2 | exon | 174376 | 174699 | 174376 | ID=MS.gene93746.t1.exon4;Parent=MS.gene93746.t1 |
| chr4.2 | CDS | 174376 | 174699 | 174376 | ID=cds.MS.gene93746.t1;Parent=MS.gene93746.t1 |
| chr4.2 | exon | 174813 | 175055 | 174813 | ID=MS.gene93746.t1.exon5;Parent=MS.gene93746.t1 |
| chr4.2 | CDS | 174813 | 175055 | 174813 | ID=cds.MS.gene93746.t1;Parent=MS.gene93746.t1 |
| chr4.2 | exon | 176721 | 176942 | 176721 | ID=MS.gene93746.t1.exon6;Parent=MS.gene93746.t1 |
| chr4.2 | CDS | 176721 | 176942 | 176721 | ID=cds.MS.gene93746.t1;Parent=MS.gene93746.t1 |
| Gene Sequence |
| Protein sequence |
