AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94206

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94206.t1 MTR_5g083340 94.498 418 11 2 1 417 1 407 0.0 815
MS.gene94206.t1 MTR_5g083330 52.208 385 93 8 36 417 3 299 9.65e-112 330
MS.gene94206.t1 MTR_5g083320 56.044 182 36 5 24 205 24 161 1.18e-52 174
MS.gene94206.t1 MTR_0939s0010 54.315 197 85 4 24 218 4 197 1.66e-47 161
MS.gene94206.t1 MTR_2g089170 73.504 117 31 0 28 144 8 124 1.98e-44 153
MS.gene94206.t1 MTR_7g070220 60.741 135 40 3 19 140 6 140 1.03e-42 157
MS.gene94206.t1 MTR_7g092190 64.773 88 31 0 60 147 5 92 4.63e-34 129
MS.gene94206.t1 MTR_1g023170 67.416 89 28 1 57 144 11 99 1.42e-30 119
MS.gene94206.t1 MTR_3g112440 71.264 87 24 1 59 144 12 98 1.13e-28 112
MS.gene94206.t1 MTR_5g082950 66.176 68 23 0 73 140 54 121 8.20e-24 101
MS.gene94206.t1 MTR_2g435590 61.429 70 27 0 73 142 84 153 6.88e-23 97.4
MS.gene94206.t1 MTR_5g062700 61.250 80 31 0 66 145 154 233 8.22e-23 99.4
MS.gene94206.t1 MTR_8g090350 37.931 145 85 2 72 215 100 240 1.74e-22 97.1
MS.gene94206.t1 MTR_4g086165 66.667 63 21 0 83 145 80 142 2.11e-22 94.7
MS.gene94206.t1 MTR_5g009620 39.041 146 73 3 28 170 53 185 5.89e-22 95.9
MS.gene94206.t1 MTR_4g086220 67.213 61 20 0 85 145 96 156 1.14e-21 93.6
MS.gene94206.t1 MTR_3g102100 57.971 69 29 0 75 143 35 103 1.62e-21 91.3
MS.gene94206.t1 MTR_3g074130 60.000 80 30 1 72 149 135 214 2.65e-21 94.7
MS.gene94206.t1 MTR_4g086160 65.574 61 21 0 85 145 96 156 2.79e-21 92.4
MS.gene94206.t1 MTR_4g008860 65.000 60 21 0 82 141 5 64 4.31e-21 90.9
MS.gene94206.t1 MTR_2g090235 41.791 134 66 3 85 214 218 343 5.26e-21 94.7
MS.gene94206.t1 MTR_5g016750 55.000 80 34 1 66 143 4 83 5.95e-21 90.1
MS.gene94206.t1 MTR_7g020980 65.517 58 20 0 85 142 51 108 7.08e-21 89.7
MS.gene94206.t1 MTR_7g021010 65.517 58 20 0 85 142 51 108 7.52e-21 89.7
MS.gene94206.t1 MTR_4g086190 67.797 59 19 0 85 143 96 154 9.77e-21 90.9
MS.gene94206.t1 MTR_7g046260 51.220 82 40 0 63 144 39 120 1.12e-20 90.9
MS.gene94206.t1 MTR_1g087920 57.971 69 29 0 82 150 74 142 1.14e-20 92.0
MS.gene94206.t1 MTR_7g021010 65.517 58 20 0 85 142 12 69 1.25e-20 87.8
MS.gene94206.t1 MTR_2g105380 62.295 61 23 0 82 142 114 174 1.36e-20 92.8
MS.gene94206.t1 MTR_2g101340 49.451 91 42 1 54 144 14 100 1.74e-20 89.4
MS.gene94206.t1 MTR_3g090760 54.321 81 37 0 60 140 88 168 3.18e-20 91.7
MS.gene94206.t1 MTR_8g022820 57.353 68 29 0 75 142 113 180 3.21e-20 92.0
MS.gene94206.t1 MTR_8g022820 57.353 68 29 0 75 142 114 181 3.34e-20 92.0
MS.gene94206.t1 MTR_8g022820 57.353 68 29 0 75 142 114 181 3.34e-20 92.0
MS.gene94206.t1 MTR_6g088405 65.000 60 21 0 85 144 44 103 4.82e-20 88.6
MS.gene94206.t1 MTR_3g106290 63.333 60 22 0 82 141 5 64 8.19e-20 87.0
MS.gene94206.t1 MTR_5g012910 61.667 60 23 0 85 144 28 87 8.63e-20 86.7
MS.gene94206.t1 MTR_8g006815 47.674 86 44 1 83 167 94 179 9.47e-20 87.0
MS.gene94206.t1 MTR_1g019110 62.712 59 22 0 85 143 44 102 1.48e-19 86.3
MS.gene94206.t1 MTR_3g110205 40.179 112 59 2 85 196 43 146 1.81e-19 86.3
MS.gene94206.t1 MTR_4g078710 51.190 84 37 1 81 160 24 107 3.08e-19 86.3
MS.gene94206.t1 MTR_1g090170 61.017 59 23 0 85 143 152 210 5.02e-19 87.8
MS.gene94206.t1 MTR_1g090170 61.017 59 23 0 85 143 239 297 5.77e-19 88.6
MS.gene94206.t1 MTR_1g048610 72.414 58 15 1 85 141 89 146 6.06e-19 85.9
MS.gene94206.t1 MTR_1g014860 35.821 134 65 3 77 189 13 146 9.13e-19 85.1
MS.gene94206.t1 MTR_4g010640 60.606 66 25 1 84 149 6 70 1.18e-18 84.3
MS.gene94206.t1 MTR_8g092460 62.712 59 22 0 84 142 144 202 1.21e-18 86.7
MS.gene94206.t1 MTR_8g102800 61.667 60 23 0 85 144 37 96 1.53e-18 84.7
MS.gene94206.t1 MTR_2g014340 61.667 60 23 0 82 141 16 75 1.58e-18 84.0
MS.gene94206.t1 MTR_2g078680 44.340 106 51 2 82 185 28 127 2.14e-18 83.6
MS.gene94206.t1 MTR_4g114570 63.793 58 21 0 84 141 6 63 2.19e-18 83.6
MS.gene94206.t1 MTR_1g070070 60.870 69 24 2 82 149 18 84 2.60e-18 81.6
MS.gene94206.t1 MTR_8g006410 62.712 59 22 0 85 143 52 110 3.01e-18 83.2
MS.gene94206.t1 MTR_8g013860 59.016 61 25 0 85 145 47 107 3.69e-18 82.8
MS.gene94206.t1 MTR_3g053690 60.000 60 24 0 82 141 24 83 3.69e-18 83.2
MS.gene94206.t1 MTR_2g014300 59.677 62 25 0 80 141 10 71 3.73e-18 82.0
MS.gene94206.t1 MTR_2g015040 61.290 62 23 1 81 141 59 120 3.83e-18 81.6
MS.gene94206.t1 MTR_8g006840 60.606 66 23 2 85 147 125 190 4.41e-18 82.4
MS.gene94206.t1 MTR_8g099215 40.351 114 56 2 59 168 89 194 4.99e-18 84.7
MS.gene94206.t1 MTR_7g117690 60.345 58 23 0 85 142 28 85 5.14e-18 81.6
MS.gene94206.t1 MTR_1g028560 51.852 81 38 1 82 161 112 192 5.49e-18 85.1
MS.gene94206.t1 MTR_2g103700 63.793 58 21 0 84 141 6 63 5.92e-18 81.6
MS.gene94206.t1 MTR_4g100650 61.667 60 23 0 85 144 74 133 5.92e-18 83.6
MS.gene94206.t1 MTR_4g100450 72.414 58 15 1 85 141 154 211 6.34e-18 84.3
MS.gene94206.t1 MTR_4g100380 56.410 78 25 2 65 141 133 202 7.70e-18 83.2
MS.gene94206.t1 MTR_4g100420 65.152 66 21 2 78 141 149 214 1.00e-17 83.6
MS.gene94206.t1 MTR_1g014780 53.731 67 30 1 77 142 29 95 1.04e-17 82.0
MS.gene94206.t1 MTR_7g096750 67.797 59 18 1 84 141 19 77 1.21e-17 79.3
MS.gene94206.t1 MTR_5g008790 52.857 70 31 1 84 151 17 86 1.49e-17 80.1
MS.gene94206.t1 MTR_4g088005 60.656 61 23 1 82 141 54 114 1.98e-17 78.6
MS.gene94206.t1 MTR_7g096700 62.121 66 24 1 84 148 19 84 2.75e-17 78.6
MS.gene94206.t1 MTR_1g074310 56.164 73 28 2 73 141 6 78 3.47e-17 78.6
MS.gene94206.t1 MTR_1g074230 60.000 75 25 2 69 142 7 77 3.53e-17 78.2
MS.gene94206.t1 MTR_5g032820 64.912 57 20 0 84 140 45 101 3.84e-17 82.8
MS.gene94206.t1 MTR_8g027465 53.623 69 30 1 74 142 30 96 4.27e-17 79.0
MS.gene94206.t1 MTR_5g075570 54.930 71 31 1 85 155 124 193 4.40e-17 81.6
MS.gene94206.t1 MTR_4g054360 55.556 72 27 2 85 155 124 191 4.95e-17 80.9
MS.gene94206.t1 MTR_7g081815 59.016 61 24 1 84 143 60 120 5.34e-17 79.7
MS.gene94206.t1 MTR_4g054740 54.054 74 29 2 85 157 97 166 6.19e-17 80.1
MS.gene94206.t1 MTR_7g081805 59.016 61 24 1 84 143 60 120 9.29e-17 79.0
MS.gene94206.t1 MTR_7g085810 51.351 74 36 0 67 140 12 85 9.64e-17 80.1
MS.gene94206.t1 MTR_4g111915 50.000 70 33 1 82 149 50 119 1.02e-16 77.0
MS.gene94206.t1 MTR_2g015050 52.439 82 35 2 61 141 113 191 1.14e-16 80.1
MS.gene94206.t1 MTR_1g014820 52.239 67 31 1 77 142 18 84 1.38e-16 79.7
MS.gene94206.t1 MTR_7g081795 46.429 84 44 1 61 143 36 119 1.96e-16 77.8
MS.gene94206.t1 MTR_8g006825 55.738 61 26 1 84 143 95 155 2.10e-16 77.8
MS.gene94206.t1 MTR_7g084370 63.158 57 21 0 84 140 41 97 3.38e-16 79.0
MS.gene94206.t1 MTR_4g119270 53.333 75 30 1 66 140 39 108 3.75e-16 79.7
MS.gene94206.t1 MTR_1g070035 40.351 114 52 3 68 173 53 158 3.79e-16 77.4
MS.gene94206.t1 MTR_4g112490 50.000 70 33 1 82 149 50 119 4.38e-16 77.0
MS.gene94206.t1 MTR_2g019750 48.780 82 37 1 59 140 29 105 4.44e-16 78.6
MS.gene94206.t1 MTR_1g014800 53.448 58 27 0 85 142 31 88 5.22e-16 77.0
MS.gene94206.t1 MTR_1g101600 62.069 58 22 0 85 142 41 98 6.08e-16 76.6
MS.gene94206.t1 MTR_7g096810 50.000 92 43 3 72 162 1 90 8.81e-16 73.9
MS.gene94206.t1 MTR_6g466130 40.404 99 54 1 44 142 30 123 1.08e-15 76.3
MS.gene94206.t1 MTR_8g069360 49.296 71 34 1 84 152 43 113 1.09e-15 79.0
MS.gene94206.t1 MTR_1g079630 51.316 76 21 1 65 140 4 63 1.18e-15 74.3
MS.gene94206.t1 MTR_1g070045 43.119 109 45 4 74 173 47 147 1.22e-15 74.7
MS.gene94206.t1 MTR_1g090290 63.793 58 20 1 85 141 113 170 1.81e-15 75.1
MS.gene94206.t1 MTR_1g070020 45.161 93 42 2 82 173 67 151 2.02e-15 75.5
MS.gene94206.t1 MTR_6g088425 65.000 60 21 0 85 144 49 108 2.08e-15 75.9
MS.gene94206.t1 MTR_5g085100 51.429 70 34 0 72 141 33 102 2.13e-15 76.6
MS.gene94206.t1 MTR_6g465850 34.559 136 83 2 85 214 63 198 2.18e-15 76.6
MS.gene94206.t1 MTR_4g054860 62.069 58 21 1 86 142 132 189 2.72e-15 76.3
MS.gene94206.t1 MTR_6g465460 39.837 123 63 2 63 179 37 154 2.73e-15 75.9
MS.gene94206.t1 MTR_6g465510 60.345 58 23 0 85 142 33 90 2.99e-15 74.7
MS.gene94206.t1 MTR_1g069985 39.640 111 53 3 69 173 54 156 3.11e-15 74.7
MS.gene94206.t1 MTR_6g465530 60.345 58 23 0 85 142 33 90 3.81e-15 73.9
MS.gene94206.t1 MTR_5g085070 46.154 78 42 0 64 141 30 107 3.87e-15 75.9
MS.gene94206.t1 MTR_2g043030 34.862 109 66 1 85 188 19 127 4.12e-15 73.9
MS.gene94206.t1 MTR_6g465430 43.269 104 48 2 63 160 37 135 4.41e-15 75.1
MS.gene94206.t1 MTR_2g438180 59.677 62 24 1 82 142 11 72 5.43e-15 72.0
MS.gene94206.t1 MTR_1g070015 46.591 88 38 2 85 171 84 163 5.79e-15 74.3
MS.gene94206.t1 MTR_2g085015 58.333 60 23 2 85 142 47 106 5.91e-15 74.3
MS.gene94206.t1 MTR_6g465690 58.621 58 24 0 85 142 63 120 6.23e-15 74.7
MS.gene94206.t1 MTR_1g070000 44.086 93 43 2 80 171 79 163 6.35e-15 73.9
MS.gene94206.t1 MTR_3g105510 51.613 62 30 0 81 142 33 94 7.55e-15 74.3
MS.gene94206.t1 MTR_1g006660 60.606 66 26 0 80 145 42 107 8.89e-15 74.3
MS.gene94206.t1 MTR_6g465450 47.500 80 37 1 63 142 37 111 9.82e-15 73.9
MS.gene94206.t1 MTR_4g035430 43.750 80 38 1 63 142 17 89 9.93e-15 73.6
MS.gene94206.t1 MTR_6g465420 48.780 82 36 1 85 160 54 135 1.49e-14 73.9
MS.gene94206.t1 MTR_6g466000 58.621 58 24 0 85 142 57 114 1.51e-14 73.2
MS.gene94206.t1 MTR_2g016730 44.828 87 33 1 54 140 7 78 1.66e-14 74.7
MS.gene94206.t1 MTR_4g082345 35.246 122 60 2 19 140 1 103 1.95e-14 74.3
MS.gene94206.t1 MTR_6g466020 41.414 99 48 1 58 156 26 114 2.02e-14 71.6
MS.gene94206.t1 MTR_2g043050 51.724 58 28 0 85 142 19 76 2.27e-14 72.4
MS.gene94206.t1 MTR_3g017420 52.000 50 24 0 93 142 3 52 2.30e-14 68.2
MS.gene94206.t1 MTR_8g032610 57.895 57 24 0 84 140 26 82 2.90e-14 73.6
MS.gene94206.t1 MTR_5g008470 45.000 80 39 1 71 145 56 135 3.83e-14 70.9
MS.gene94206.t1 MTR_7g028925 51.515 66 28 2 78 142 21 83 4.59e-14 68.2
MS.gene94206.t1 MTR_1g074250 59.016 61 23 1 84 142 18 78 4.79e-14 69.3
MS.gene94206.t1 MTR_6g029180 44.048 84 45 1 57 140 7 88 5.08e-14 72.8
MS.gene94206.t1 MTR_1g012470 62.712 59 22 0 83 141 5 63 6.59e-14 70.5
MS.gene94206.t1 MTR_5g008590 37.500 128 57 2 85 189 11 138 8.64e-14 70.1
MS.gene94206.t1 MTR_5g008540 45.455 77 40 1 78 152 17 93 9.21e-14 67.4
MS.gene94206.t1 MTR_8g085960 41.860 86 43 1 55 140 2 80 1.00e-13 70.9
MS.gene94206.t1 MTR_6g012970 50.769 65 32 0 76 140 29 93 2.34e-13 71.6
MS.gene94206.t1 MTR_2g043020 37.500 104 56 2 85 179 19 122 3.78e-13 68.6
MS.gene94206.t1 MTR_4g102670 56.897 58 24 1 85 142 15 71 4.50e-13 67.4
MS.gene94206.t1 MTR_2g043040 50.000 58 29 0 85 142 19 76 4.86e-13 68.6
MS.gene94206.t1 MTR_3g095190 61.290 62 24 0 81 142 166 227 5.42e-13 70.1
MS.gene94206.t1 MTR_3g098580 63.793 58 21 0 85 142 76 133 9.23e-13 68.6
MS.gene94206.t1 MTR_5g058470 45.238 84 45 1 59 141 70 153 1.05e-12 68.9
MS.gene94206.t1 MTR_3g107380 63.793 58 21 0 84 141 7 64 1.09e-12 67.4
MS.gene94206.t1 MTR_8g023680 54.386 57 17 1 84 140 115 162 1.14e-12 69.3
MS.gene94206.t1 MTR_7g011630 51.613 62 30 0 79 140 36 97 1.41e-12 69.3
MS.gene94206.t1 MTR_3g062440 48.235 85 41 3 68 150 99 182 3.03e-12 67.0
MS.gene94206.t1 MTR_1g040430 45.783 83 38 2 93 168 119 201 3.72e-12 65.5
MS.gene94206.t1 MTR_3g105480 51.786 56 27 0 87 142 33 88 3.93e-12 65.9
MS.gene94206.t1 MTR_1g097190 54.386 57 25 1 85 140 23 79 6.33e-12 63.2
MS.gene94206.t1 MTR_1g069960 61.667 60 22 1 84 142 26 85 6.49e-12 63.5
MS.gene94206.t1 MTR_1g043350 43.636 110 55 3 47 155 46 149 7.57e-12 65.1
MS.gene94206.t1 MTR_8g023700 44.286 70 30 1 85 154 117 177 1.50e-11 65.9
MS.gene94206.t1 MTR_1g074370 56.757 74 25 2 82 148 70 143 2.20e-11 63.5
MS.gene94206.t1 MTR_5g009410 63.934 61 22 0 85 145 117 177 2.47e-11 64.7
MS.gene94206.t1 MTR_5g008550 57.627 59 25 0 85 143 21 79 2.61e-11 62.8
MS.gene94206.t1 MTR_3g072610 50.000 76 31 2 73 141 8 83 3.07e-11 63.2
MS.gene94206.t1 MTR_6g033255 64.407 59 21 0 85 143 20 78 3.92e-11 62.8
MS.gene94206.t1 MTR_5g010930 51.562 64 25 1 85 142 49 112 5.67e-11 62.4
MS.gene94206.t1 MTR_5g010940 51.562 64 25 1 85 142 54 117 7.90e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94206.t1 AT2G40340 38.503 374 146 12 19 385 6 302 2.33e-60 199
MS.gene94206.t1 AT2G40340 38.710 372 144 12 21 385 15 309 3.41e-60 199
MS.gene94206.t1 AT2G40340 55.114 176 56 5 19 190 6 162 1.21e-51 176
MS.gene94206.t1 AT5G05410 57.609 184 47 4 5 188 3 155 3.71e-46 161
MS.gene94206.t1 AT5G05410 57.609 184 47 4 5 188 3 155 4.77e-46 162
MS.gene94206.t1 AT2G40350 63.780 127 38 3 19 141 8 130 1.12e-45 155
MS.gene94206.t1 AT2G40350 63.780 127 38 3 19 141 1 123 1.16e-45 155
MS.gene94206.t1 AT2G40340 34.700 317 131 7 72 385 1 244 4.88e-43 152
MS.gene94206.t1 AT2G40340 34.700 317 131 7 72 385 1 244 4.88e-43 152
MS.gene94206.t1 AT2G40340 34.700 317 131 7 72 385 1 244 4.88e-43 152
MS.gene94206.t1 AT3G11020 55.747 174 47 3 18 189 10 155 3.88e-39 143
MS.gene94206.t1 AT1G75490 57.658 111 42 1 59 169 16 121 2.69e-37 135
MS.gene94206.t1 AT5G18450 67.470 83 27 0 58 140 7 89 5.44e-33 126
MS.gene94206.t1 AT2G38340 59.483 116 30 3 35 142 29 135 6.61e-30 116
MS.gene94206.t1 AT3G57600 61.176 85 33 0 59 143 2 86 1.59e-28 113
MS.gene94206.t1 AT5G65130 59.770 87 34 1 85 170 111 197 1.75e-25 105
MS.gene94206.t1 AT5G65130 59.770 87 34 1 85 170 113 199 2.01e-25 105
MS.gene94206.t1 AT3G16770 58.824 68 28 0 76 143 70 137 1.39e-22 96.3
MS.gene94206.t1 AT4G06746 61.905 63 24 0 80 142 31 93 3.19e-22 92.8
MS.gene94206.t1 AT2G47520 41.129 124 62 2 75 198 40 152 3.52e-22 93.2
MS.gene94206.t1 AT1G78080 64.286 70 25 0 74 143 141 210 4.86e-22 96.7
MS.gene94206.t1 AT1G22190 62.338 77 28 1 68 143 65 141 7.19e-22 94.7
MS.gene94206.t1 AT1G46768 67.797 59 19 0 85 143 31 89 1.30e-21 91.3
MS.gene94206.t1 AT1G46768 67.797 59 19 0 85 143 31 89 1.30e-21 91.3
MS.gene94206.t1 AT1G46768 67.797 59 19 0 85 143 31 89 1.30e-21 90.9
MS.gene94206.t1 AT2G22200 65.079 63 22 0 81 143 67 129 1.43e-21 94.0
MS.gene94206.t1 AT2G33710 65.574 61 21 0 82 142 67 127 1.74e-21 92.8
MS.gene94206.t1 AT2G33710 65.574 61 21 0 82 142 67 127 1.99e-21 92.8
MS.gene94206.t1 AT1G36060 60.494 81 28 1 67 143 121 201 3.03e-21 94.0
MS.gene94206.t1 AT5G67190 47.826 92 44 1 77 168 13 100 3.10e-21 90.9
MS.gene94206.t1 AT4G11140 44.340 106 49 2 83 178 85 190 6.29e-21 92.8
MS.gene94206.t1 AT5G13330 62.500 64 24 0 79 142 33 96 7.22e-21 90.9
MS.gene94206.t1 AT4G39780 69.492 59 18 0 85 143 93 151 8.52e-21 92.0
MS.gene94206.t1 AT2G35700 38.889 144 76 3 85 216 45 188 9.02e-21 90.1
MS.gene94206.t1 AT4G28140 46.226 106 49 1 85 190 143 240 1.54e-20 91.7
MS.gene94206.t1 AT5G25190 63.333 60 22 0 82 141 5 64 2.54e-20 88.2
MS.gene94206.t1 AT2G20880 62.121 66 25 0 78 143 180 245 2.77e-20 91.7
MS.gene94206.t1 AT4G36900 62.712 59 22 0 85 143 30 88 3.16e-20 88.6
MS.gene94206.t1 AT4G32800 60.000 65 26 0 80 144 14 78 4.23e-20 89.0
MS.gene94206.t1 AT2G25820 61.290 62 24 0 85 146 26 87 4.87e-20 88.6
MS.gene94206.t1 AT2G23340 62.712 59 22 0 85 143 28 86 5.57e-20 87.4
MS.gene94206.t1 AT4G13620 66.102 59 20 0 85 143 232 290 6.03e-20 91.3
MS.gene94206.t1 AT1G72360 52.941 68 32 0 77 144 17 84 1.34e-19 87.0
MS.gene94206.t1 AT4G16750 49.398 83 42 0 62 144 17 99 1.41e-19 86.3
MS.gene94206.t1 AT5G61890 65.517 58 20 0 85 142 90 147 1.42e-19 87.8
MS.gene94206.t1 AT1G71450 37.791 172 86 5 67 231 10 167 1.61e-19 86.3
MS.gene94206.t1 AT3G50260 58.065 62 26 0 82 143 18 79 1.66e-19 85.1
MS.gene94206.t1 AT1G72360 52.941 68 32 0 77 144 66 133 1.87e-19 87.8
MS.gene94206.t1 AT1G72360 52.941 68 32 0 77 144 68 135 2.03e-19 87.8
MS.gene94206.t1 AT5G11590 49.412 85 41 1 61 145 29 111 3.23e-19 86.7
MS.gene94206.t1 AT5G51990 51.648 91 38 1 85 169 54 144 3.33e-19 86.3
MS.gene94206.t1 AT4G25470 53.659 82 32 1 85 160 51 132 4.72e-19 85.9
MS.gene94206.t1 AT4G27950 61.667 60 23 0 81 140 114 173 4.84e-19 88.2
MS.gene94206.t1 AT3G60490 63.333 60 22 0 85 144 71 130 5.98e-19 86.3
MS.gene94206.t1 AT3G15210 46.154 91 46 1 82 169 22 112 8.86e-19 85.1
MS.gene94206.t1 AT1G15360 65.517 58 20 0 84 141 6 63 9.16e-19 84.3
MS.gene94206.t1 AT1G15360 65.517 58 20 0 84 141 6 63 9.16e-19 84.3
MS.gene94206.t1 AT5G25810 61.667 60 23 0 85 144 36 95 1.12e-18 84.7
MS.gene94206.t1 AT2G44940 61.667 60 23 0 85 144 100 159 1.42e-18 85.9
MS.gene94206.t1 AT1G03800 42.727 110 57 1 43 146 5 114 1.42e-18 85.1
MS.gene94206.t1 AT2G44840 38.739 111 65 2 36 143 41 151 1.53e-18 84.3
MS.gene94206.t1 AT3G16280 60.000 60 24 0 85 144 61 120 1.78e-18 84.7
MS.gene94206.t1 AT2G40220 67.647 68 22 0 73 140 43 110 2.47e-18 85.9
MS.gene94206.t1 AT3G16280 60.000 60 24 0 85 144 79 138 2.47e-18 84.7
MS.gene94206.t1 AT4G23750 62.712 59 22 0 82 140 119 177 3.02e-18 85.9
MS.gene94206.t1 AT4G23750 62.712 59 22 0 82 140 119 177 3.02e-18 85.9
MS.gene94206.t1 AT5G21960 61.017 59 23 0 84 142 6 64 5.12e-18 82.8
MS.gene94206.t1 AT1G22985 51.163 86 36 3 81 161 71 155 5.72e-18 81.3
MS.gene94206.t1 AT5G25390 63.333 60 22 0 84 143 6 65 5.96e-18 82.0
MS.gene94206.t1 AT4G25490 65.517 58 20 0 85 142 48 105 6.46e-18 82.4
MS.gene94206.t1 AT1G21910 50.704 71 35 0 85 155 50 120 6.70e-18 82.8
MS.gene94206.t1 AT3G20310 57.143 70 29 1 82 150 24 93 7.25e-18 83.2
MS.gene94206.t1 AT5G53290 63.158 57 21 0 84 140 124 180 7.36e-18 84.7
MS.gene94206.t1 AT5G47220 67.241 58 18 1 85 141 117 174 7.62e-18 82.8
MS.gene94206.t1 AT3G61630 63.793 58 21 0 83 140 103 160 8.95e-18 84.0
MS.gene94206.t1 AT1G71130 62.121 66 20 1 80 140 74 139 8.98e-18 80.5
MS.gene94206.t1 AT3G23240 63.492 63 22 1 79 140 76 138 1.09e-17 82.0
MS.gene94206.t1 AT1G22810 41.176 102 58 1 81 180 10 111 1.21e-17 79.7
MS.gene94206.t1 AT5G47230 65.672 67 20 2 78 141 147 213 1.70e-17 83.2
MS.gene94206.t1 AT4G25480 63.793 58 21 0 85 142 51 108 1.80e-17 81.3
MS.gene94206.t1 AT4G17500 67.241 58 18 1 85 141 148 205 3.06e-17 81.6
MS.gene94206.t1 AT3G23230 57.746 71 24 2 84 148 19 89 3.57e-17 78.2
MS.gene94206.t1 AT2G46310 43.519 108 59 1 33 140 49 154 3.72e-17 82.0
MS.gene94206.t1 AT5G51190 59.375 64 25 1 79 141 66 129 3.86e-17 80.5
MS.gene94206.t1 AT1G50640 58.333 60 25 0 82 141 25 84 3.93e-17 80.5
MS.gene94206.t1 AT1G28360 60.000 60 24 0 82 141 9 68 6.93e-17 79.0
MS.gene94206.t1 AT5G44210 47.619 84 38 1 64 141 6 89 7.90e-17 79.0
MS.gene94206.t1 AT1G01250 50.633 79 32 2 69 142 26 102 8.54e-17 78.6
MS.gene94206.t1 AT5G43410 57.143 70 29 1 73 141 3 72 8.97e-17 77.0
MS.gene94206.t1 AT1G24590 64.912 57 20 0 84 140 57 113 1.18e-16 80.5
MS.gene94206.t1 AT1G28160 62.712 59 22 0 82 140 36 94 1.60e-16 79.3
MS.gene94206.t1 AT1G19210 48.529 68 35 0 75 142 2 69 1.89e-16 77.4
MS.gene94206.t1 AT5G13910 61.404 57 22 0 84 140 19 75 1.96e-16 78.2
MS.gene94206.t1 AT5G18560 52.113 71 34 0 70 140 40 110 2.72e-16 80.1
MS.gene94206.t1 AT1G12980 56.923 65 28 0 76 140 48 112 3.10e-16 79.7
MS.gene94206.t1 AT2G36450 61.017 59 22 1 85 142 15 73 3.70e-16 76.6
MS.gene94206.t1 AT2G31230 55.263 76 29 2 80 154 81 152 4.11e-16 77.8
MS.gene94206.t1 AT5G25390 61.667 60 20 1 84 143 6 62 7.40e-16 75.9
MS.gene94206.t1 AT1G77200 62.903 62 23 0 85 146 43 104 9.07e-16 77.0
MS.gene94206.t1 AT1G12890 54.412 68 31 0 73 140 9 76 9.38e-16 76.3
MS.gene94206.t1 AT1G71520 43.421 76 39 1 72 143 1 76 1.09e-15 74.3
MS.gene94206.t1 AT1G53910 37.324 142 84 3 75 212 113 253 2.47e-15 77.4
MS.gene94206.t1 AT1G53910 36.527 167 94 5 57 212 90 255 2.58e-15 77.4
MS.gene94206.t1 AT1G53910 36.527 167 94 5 57 212 90 255 2.58e-15 77.4
MS.gene94206.t1 AT5G61600 62.069 58 21 1 85 141 88 145 4.64e-15 74.7
MS.gene94206.t1 AT1G28370 56.897 58 25 0 84 141 19 76 4.86e-15 73.2
MS.gene94206.t1 AT4G17490 63.793 58 20 1 85 141 137 194 6.04e-15 75.1
MS.gene94206.t1 AT4G31060 35.821 134 71 5 75 193 16 149 6.13e-15 73.2
MS.gene94206.t1 AT1G28370 56.897 58 25 0 84 141 57 114 6.52e-15 73.6
MS.gene94206.t1 AT1G74930 44.737 76 40 1 69 142 3 78 8.23e-15 73.2
MS.gene94206.t1 AT3G14230 48.515 101 50 1 75 175 113 211 1.07e-14 75.5
MS.gene94206.t1 AT3G14230 48.515 101 50 1 75 175 114 212 1.08e-14 75.5
MS.gene94206.t1 AT5G07580 60.345 58 22 1 85 141 110 167 1.13e-14 73.2
MS.gene94206.t1 AT3G14230 48.515 101 50 1 75 175 118 216 1.27e-14 75.5
MS.gene94206.t1 AT1G77640 54.545 66 30 0 79 144 37 102 2.05e-14 73.2
MS.gene94206.t1 AT1G43160 55.263 76 31 1 84 156 60 135 2.40e-14 71.6
MS.gene94206.t1 AT4G34410 63.492 63 22 1 85 147 136 197 2.48e-14 73.2
MS.gene94206.t1 AT5G07310 65.517 58 20 0 85 142 92 149 8.54e-14 71.6
MS.gene94206.t1 AT5G19790 50.000 70 35 0 73 142 10 79 8.86e-14 71.2
MS.gene94206.t1 AT4G18450 61.017 59 21 2 84 140 109 167 1.63e-13 71.2
MS.gene94206.t1 AT5G50080 62.295 61 23 0 82 142 83 143 1.98e-13 69.7
MS.gene94206.t1 AT5G50080 62.295 61 23 0 82 142 74 134 2.18e-13 69.7
MS.gene94206.t1 AT1G68550 34.286 140 74 4 70 201 98 227 4.19e-13 70.5
MS.gene94206.t1 AT1G68550 34.286 140 74 4 70 201 98 227 4.19e-13 70.5
MS.gene94206.t1 AT5G11190 60.000 60 24 0 84 143 6 65 6.80e-13 67.4
MS.gene94206.t1 AT1G12610 55.172 58 26 0 85 142 30 87 1.56e-12 67.0
MS.gene94206.t1 AT1G63030 56.897 58 25 0 85 142 30 87 2.82e-12 65.5
MS.gene94206.t1 AT1G63030 56.897 58 25 0 85 142 30 87 2.82e-12 65.5
MS.gene94206.t1 AT1G64380 45.536 112 50 2 85 186 136 246 3.44e-12 67.8
MS.gene94206.t1 AT1G44830 58.065 62 25 1 84 144 34 95 5.15e-12 65.5
MS.gene94206.t1 AT1G33760 55.738 61 27 0 85 145 20 80 5.25e-12 64.7
MS.gene94206.t1 AT5G64750 56.863 51 22 0 92 142 192 242 9.96e-12 66.6
MS.gene94206.t1 AT3G23220 62.903 62 22 1 81 141 10 71 1.61e-11 62.4
MS.gene94206.t1 AT1G04370 60.656 61 23 1 82 141 17 77 2.47e-11 61.6

Find 99 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGAGGTGGATGAGCTTT+TGG 0.152065 5.4:-66081903 MS.gene94206:CDS
GGGAGAAGATACACCGTTTC+TGG 0.163018 5.4:-66081660 MS.gene94206:CDS
CAAAGTCTACTTCCTCTATT+TGG 0.187638 5.4:+66082526 None:intergenic
AGATACACCGTTTCTGGATT+TGG 0.236598 5.4:-66081654 MS.gene94206:CDS
GGAAATGGGTTGCTGAAATT+AGG 0.238482 5.4:-66082552 MS.gene94206:CDS
GTGATGCAAAGTTTGGATTT+TGG 0.248812 5.4:-66081845 MS.gene94206:CDS
AATAATCCGATTGATGATTC+TGG 0.273054 5.4:-66081869 MS.gene94206:CDS
ATCGGATTATAGTTGTATTC+AGG 0.285106 5.4:-66082404 MS.gene94206:CDS
ACTGTTGATGTTTGTTATAA+AGG 0.292146 5.4:-66082226 MS.gene94206:CDS
ACTTAACTTTCCTGATATAT+CGG 0.317233 5.4:-66082422 MS.gene94206:CDS
ACAGCATCAGGTGTCGATTA+TGG 0.318832 5.4:-66081707 MS.gene94206:CDS
ACCTGAGGATTACTTTCTTC+AGG 0.328346 5.4:+66081809 None:intergenic
GTTGGGGAGTTTGCCTCATA+TGG 0.328738 5.4:-66081735 MS.gene94206:CDS
TTCTGGGGTGATGCAAAGTT+TGG 0.360342 5.4:-66081852 MS.gene94206:CDS
CAACTATAATCCGATATATC+AGG 0.375560 5.4:+66082412 None:intergenic
TTGTGCTATTGAGGATGTTA+AGG 0.380422 5.4:-66082281 MS.gene94206:CDS
TAGCTGAGACTCTAGCAAAA+TGG 0.390927 5.4:-66082729 MS.gene94206:CDS
GAAATGGGTTGCTGAAATTA+GGG 0.399012 5.4:-66082551 MS.gene94206:CDS
TTCCTTCTGAATTTACATCT+TGG 0.401082 5.4:+66082116 None:intergenic
TTAGCCGGTGCTTTACGCTT+TGG 0.401156 5.4:+66082661 None:intergenic
AATCCAGATGCTAAGCTGTT+GGG 0.408233 5.4:-66081752 MS.gene94206:CDS
TCTTGCTTCATTCTACTAGT+TGG 0.417780 5.4:+66082187 None:intergenic
AGCTGCTAGCTGTTGTTCTT+CGG 0.428526 5.4:-66082356 MS.gene94206:CDS
TCACGTGGATGATTTCTTTG+AGG 0.433868 5.4:-66081918 MS.gene94206:CDS
GAGGTGTTAGACAGAGGACT+TGG 0.449143 5.4:-66082576 MS.gene94206:CDS
CTCCCCAACAGCTTAGCATC+TGG 0.449594 5.4:+66081749 None:intergenic
ATAATCCGATTGATGATTCT+GGG 0.453289 5.4:-66081868 MS.gene94206:CDS
TTCTGAGGTTTGTGCTATTG+AGG 0.453311 5.4:-66082290 MS.gene94206:CDS
ACAGTGTTGTTCATATGAAC+AGG 0.454495 5.4:+66082244 None:intergenic
TAATGCTTCTCTTGCGCCGT+TGG 0.459289 5.4:-66082803 MS.gene94206:CDS
AAAACTAGGAGTAGAGGAAA+AGG 0.467058 5.4:-66082763 MS.gene94206:CDS
ACCTGAAGAAAGTAATCCTC+AGG 0.469002 5.4:-66081810 MS.gene94206:CDS
GGATTACCTCTGAACTTCAA+TGG 0.471375 5.4:-66081686 MS.gene94206:CDS
CAAATAGAGGAAGTAGACTT+TGG 0.472515 5.4:-66082525 MS.gene94206:CDS
GTTTGAGTTCCCGATGTTTG+TGG 0.475222 5.4:+66082076 None:intergenic
TTGTATTCAGGAATATTTGA+AGG 0.478283 5.4:-66082392 MS.gene94206:CDS
CATATGGAACACACAGCATC+AGG 0.479072 5.4:-66081719 MS.gene94206:CDS
TACCTCTGAACTTCAATGGC+GGG 0.490863 5.4:-66081682 MS.gene94206:CDS
AAGCGTAAAGCACCGGCTAA+AGG 0.491219 5.4:-66082658 MS.gene94206:CDS
AAGAGGAAAACTAGGAGTAG+AGG 0.491742 5.4:-66082769 MS.gene94206:CDS
CCAAGGTCTATGATATCATC+AGG 0.500265 5.4:+66082151 None:intergenic
AGAGGAAGTAGACTTTGGTT+AGG 0.502051 5.4:-66082520 MS.gene94206:CDS
AAAGGGTGTATGAAAGGTAA+AGG 0.503890 5.4:-66082628 MS.gene94206:CDS
CCGGCTAAAGGTTCGAAGAA+AGG 0.504270 5.4:-66082646 MS.gene94206:CDS
CGTGGATGATTTCTTTGAGG+TGG 0.506641 5.4:-66081915 MS.gene94206:CDS
CGGCTAAAGGTTCGAAGAAA+GGG 0.508494 5.4:-66082645 MS.gene94206:CDS
TAATCCAGATGCTAAGCTGT+TGG 0.515884 5.4:-66081753 MS.gene94206:CDS
TTCATATGAACAGGTATCCT+AGG 0.516921 5.4:+66082253 None:intergenic
CTTTATGCTGGTAAAGATGA+TGG 0.517668 5.4:-66082688 MS.gene94206:CDS
AAGAAAGTAATCCTCAGGTT+GGG 0.524183 5.4:-66081805 MS.gene94206:CDS
ATATCATCAGGCTCATCCAT+TGG 0.528488 5.4:+66082163 None:intergenic
GAAATTAGGGAACCAAATAG+AGG 0.528600 5.4:-66082538 MS.gene94206:CDS
GATGCTGTGTGTTCCATATG+AGG 0.531382 5.4:+66081722 None:intergenic
ACCTCTGAACTTCAATGGCG+GGG 0.532633 5.4:-66081681 MS.gene94206:CDS
AGCACAGAATCGTGTGTTTG+TGG 0.534037 5.4:+66082043 None:intergenic
TACAATGAGAAGCTTTATGC+TGG 0.534260 5.4:-66082700 MS.gene94206:CDS
CCTTTCTTCGAACCTTTAGC+CGG 0.540256 5.4:+66082646 None:intergenic
TTAAAACATTGATCATAAGC+AGG 0.541137 5.4:+66082823 None:intergenic
CACGATTCAAGAGGAATGCA+AGG 0.542286 5.4:-66081617 MS.gene94206:CDS
TCGCGCAGAAGGACCATACA+TGG 0.549570 5.4:+66082444 None:intergenic
ATCACCCCAGAATCATCAAT+CGG 0.549835 5.4:+66081863 None:intergenic
AGGTGTTAGACAGAGGACTT+GGG 0.550286 5.4:-66082575 MS.gene94206:CDS
TAGAATGAAGCAAGAGCCAA+TGG 0.552297 5.4:-66082179 MS.gene94206:CDS
CTAACACAACCACAAACATC+GGG 0.552366 5.4:-66082085 MS.gene94206:CDS
TCATAATCCAAATCCAGAAA+CGG 0.553925 5.4:+66081647 None:intergenic
GAAGAAAGTAATCCTCAGGT+TGG 0.554576 5.4:-66081806 MS.gene94206:CDS
ATCCAGATGCTAAGCTGTTG+GGG 0.555129 5.4:-66081751 MS.gene94206:CDS
ACAAACACACGATTCTGTGC+TGG 0.560622 5.4:-66082041 MS.gene94206:CDS
ATTCAAGAGGAATGCAAGGA+AGG 0.562142 5.4:-66081613 MS.gene94206:CDS
CGATTCTGTGCTGGTTGGAG+AGG 0.565617 5.4:-66082032 MS.gene94206:CDS
ATCCAAGATGTAAATTCAGA+AGG 0.567305 5.4:-66082118 MS.gene94206:CDS
TCTAACACAACCACAAACAT+CGG 0.567821 5.4:-66082086 MS.gene94206:CDS
TCGAAGAAAGGGTGTATGAA+AGG 0.574846 5.4:-66082634 MS.gene94206:CDS
GGAAAGTTAAGTCGCGCAGA+AGG 0.575063 5.4:+66082433 None:intergenic
AACTGTGTCTAGTCATTCTG+AGG 0.586532 5.4:-66082305 MS.gene94206:CDS
TGAGACTCTAGCAAAATGGA+AGG 0.591128 5.4:-66082725 MS.gene94206:CDS
GATCTAAATCACGATTCAAG+AGG 0.592296 5.4:-66081626 MS.gene94206:CDS
GTTGTTGTCTCAGATGTCGC+AGG 0.599912 5.4:+66082325 None:intergenic
TATGCTGCTAGAGCCATGTA+TGG 0.603738 5.4:-66082457 MS.gene94206:CDS
TAAACCAAAGCGTAAAGCAC+CGG 0.609257 5.4:-66082665 MS.gene94206:CDS
TAAAGGAGGACCTCAAAACT+CGG 0.611825 5.4:-66082611 MS.gene94206:CDS
AGTGGATGAGTTCTTTCACG+TGG 0.615259 5.4:-66081933 MS.gene94206:CDS
CCTCTGAACTTCAATGGCGG+GGG 0.616934 5.4:-66081680 MS.gene94206:CDS
ACACACGATTCTGTGCTGGT+TGG 0.622925 5.4:-66082037 MS.gene94206:CDS
GGGTGTGTGTAATGACCAGA+TGG 0.627240 5.4:-66082011 MS.gene94206:CDS
GATTCTGTGCTGGTTGGAGA+GGG 0.638245 5.4:-66082031 MS.gene94206:CDS
AGGATGTTAAGGAGATACCT+AGG 0.639022 5.4:-66082270 MS.gene94206:CDS
GGTGTTAGACAGAGGACTTG+GGG 0.639869 5.4:-66082574 MS.gene94206:CDS
GATGATATCATAGACCTTGG+TGG 0.641479 5.4:-66082148 MS.gene94206:CDS
CCTGATGATATCATAGACCT+TGG 0.647685 5.4:-66082151 MS.gene94206:CDS
TTACCTCTGAACTTCAATGG+CGG 0.652917 5.4:-66081683 MS.gene94206:CDS
AACTCGGAGAATAAGTATCG+AGG 0.657332 5.4:-66082595 MS.gene94206:CDS
CTTGAAGCAGTCCCAACCTG+AGG 0.664562 5.4:+66081794 None:intergenic
TAATCCGATTGATGATTCTG+GGG 0.667524 5.4:-66081867 MS.gene94206:CDS
GGGTGTATGAAAGGTAAAGG+AGG 0.671358 5.4:-66082625 MS.gene94206:CDS
CTTGGATTTCACCACCACCA+AGG 0.674758 5.4:+66082134 None:intergenic
GATATCATAGACCTTGGTGG+TGG 0.689732 5.4:-66082145 MS.gene94206:CDS
GTGTTAGACAGAGGACTTGG+GGG 0.694177 5.4:-66082573 MS.gene94206:CDS
AGTATCGAGGTGTTAGACAG+AGG 0.700935 5.4:-66082582 MS.gene94206:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ACTTAACTTTCCTGATATAT+CGG - chr5.4:66082011-66082030 MS.gene94206:CDS 25.0%
! TTAAAACATTGATCATAAGC+AGG + chr5.4:66081613-66081632 None:intergenic 25.0%
! TTGTATTCAGGAATATTTGA+AGG - chr5.4:66082041-66082060 MS.gene94206:CDS 25.0%
!! TTCAAGCTTCTTTTATGAAT+TGG - chr5.4:66082656-66082675 MS.gene94206:CDS 25.0%
!!! ACTGTTGATGTTTGTTATAA+AGG - chr5.4:66082207-66082226 MS.gene94206:CDS 25.0%
!!! TTATTTGAAGAGTTTTTCAG+TGG - chr5.4:66082482-66082501 MS.gene94206:CDS 25.0%
ATCCAAGATGTAAATTCAGA+AGG - chr5.4:66082315-66082334 MS.gene94206:CDS 30.0%
ATCGGATTATAGTTGTATTC+AGG - chr5.4:66082029-66082048 MS.gene94206:CDS 30.0%
CAACTATAATCCGATATATC+AGG + chr5.4:66082024-66082043 None:intergenic 30.0%
TATCGAAAAAGAGGAAAACT+AGG - chr5.4:66081656-66081675 MS.gene94206:CDS 30.0%
TCATAATCCAAATCCAGAAA+CGG + chr5.4:66082789-66082808 None:intergenic 30.0%
TTCCTTCTGAATTTACATCT+TGG + chr5.4:66082320-66082339 None:intergenic 30.0%
! AATAATCCGATTGATGATTC+TGG - chr5.4:66082564-66082583 MS.gene94206:CDS 30.0%
! ATAATCCGATTGATGATTCT+GGG - chr5.4:66082565-66082584 MS.gene94206:CDS 30.0%
!!! CTCTTTTTCGATAATTCCAA+CGG + chr5.4:66081649-66081668 None:intergenic 30.0%
AAAACTAGGAGTAGAGGAAA+AGG - chr5.4:66081670-66081689 MS.gene94206:CDS 35.0%
AAGAAAGTAATCCTCAGGTT+GGG - chr5.4:66082628-66082647 MS.gene94206:CDS 35.0%
CAAAGTCTACTTCCTCTATT+TGG + chr5.4:66081910-66081929 None:intergenic 35.0%
CAAATAGAGGAAGTAGACTT+TGG - chr5.4:66081908-66081927 MS.gene94206:CDS 35.0%
CGTTGGAATTATCGAAAAAG+AGG - chr5.4:66081647-66081666 MS.gene94206:CDS 35.0%
CTTTATGCTGGTAAAGATGA+TGG - chr5.4:66081745-66081764 MS.gene94206:CDS 35.0%
GAAATTAGGGAACCAAATAG+AGG - chr5.4:66081895-66081914 MS.gene94206:CDS 35.0%
GATCTAAATCACGATTCAAG+AGG - chr5.4:66082807-66082826 MS.gene94206:CDS 35.0%
TCTAACACAACCACAAACAT+CGG - chr5.4:66082347-66082366 MS.gene94206:CDS 35.0%
TCTTGCTTCATTCTACTAGT+TGG + chr5.4:66082249-66082268 None:intergenic 35.0%
TTCATATGAACAGGTATCCT+AGG + chr5.4:66082183-66082202 None:intergenic 35.0%
! AAAGGGTGTATGAAAGGTAA+AGG - chr5.4:66081805-66081824 MS.gene94206:CDS 35.0%
! AAGTTTGGATTTTGGACAAG+TGG - chr5.4:66082596-66082615 MS.gene94206:CDS 35.0%
! ACAGTGTTGTTCATATGAAC+AGG + chr5.4:66082192-66082211 None:intergenic 35.0%
! AGTTTGGATTTTGGACAAGT+GGG - chr5.4:66082597-66082616 MS.gene94206:CDS 35.0%
! GACTTTGGTTAGGTACTTTT+CGG - chr5.4:66081923-66081942 MS.gene94206:CDS 35.0%
! GTGATGCAAAGTTTGGATTT+TGG - chr5.4:66082588-66082607 MS.gene94206:CDS 35.0%
! TAATCCGATTGATGATTCTG+GGG - chr5.4:66082566-66082585 MS.gene94206:CDS 35.0%
! TACAATGAGAAGCTTTATGC+TGG - chr5.4:66081733-66081752 MS.gene94206:CDS 35.0%
! TACTTATTCTCCGAGTTTTG+AGG + chr5.4:66081835-66081854 None:intergenic 35.0%
! TTGTGCTATTGAGGATGTTA+AGG - chr5.4:66082152-66082171 MS.gene94206:CDS 35.0%
!! ATGACCAGATGGATTTTTCA+TGG - chr5.4:66082433-66082452 MS.gene94206:CDS 35.0%
!! GAAATGGGTTGCTGAAATTA+GGG - chr5.4:66081882-66081901 MS.gene94206:CDS 35.0%
AACTGTGTCTAGTCATTCTG+AGG - chr5.4:66082128-66082147 MS.gene94206:CDS 40.0%
AAGAGGAAAACTAGGAGTAG+AGG - chr5.4:66081664-66081683 MS.gene94206:CDS 40.0%
AATCCAGATGCTAAGCTGTT+GGG - chr5.4:66082681-66082700 MS.gene94206:CDS 40.0%
ACCTGAAGAAAGTAATCCTC+AGG - chr5.4:66082623-66082642 MS.gene94206:CDS 40.0%
ACCTGAGGATTACTTTCTTC+AGG + chr5.4:66082627-66082646 None:intergenic 40.0%
AGAGGAAGTAGACTTTGGTT+AGG - chr5.4:66081913-66081932 MS.gene94206:CDS 40.0%
AGGATGTTAAGGAGATACCT+AGG - chr5.4:66082163-66082182 MS.gene94206:CDS 40.0%
ATATCATCAGGCTCATCCAT+TGG + chr5.4:66082273-66082292 None:intergenic 40.0%
ATCACCCCAGAATCATCAAT+CGG + chr5.4:66082573-66082592 None:intergenic 40.0%
ATTCAAGAGGAATGCAAGGA+AGG - chr5.4:66082820-66082839 MS.gene94206:CDS 40.0%
CCAAGGTCTATGATATCATC+AGG + chr5.4:66082285-66082304 None:intergenic 40.0%
CCATCCATGAAAAATCCATC+TGG + chr5.4:66082440-66082459 None:intergenic 40.0%
CCTGATGATATCATAGACCT+TGG - chr5.4:66082282-66082301 MS.gene94206:CDS 40.0%
CTAACACAACCACAAACATC+GGG - chr5.4:66082348-66082367 MS.gene94206:CDS 40.0%
GAAGAAAGTAATCCTCAGGT+TGG - chr5.4:66082627-66082646 MS.gene94206:CDS 40.0%
GATGATATCATAGACCTTGG+TGG - chr5.4:66082285-66082304 MS.gene94206:CDS 40.0%
GGATTACCTCTGAACTTCAA+TGG - chr5.4:66082747-66082766 MS.gene94206:CDS 40.0%
TAAACCAAAGCGTAAAGCAC+CGG - chr5.4:66081768-66081787 MS.gene94206:CDS 40.0%
TAAAGGAGGACCTCAAAACT+CGG - chr5.4:66081822-66081841 MS.gene94206:CDS 40.0%
TAATCCAGATGCTAAGCTGT+TGG - chr5.4:66082680-66082699 MS.gene94206:CDS 40.0%
TAGAATGAAGCAAGAGCCAA+TGG - chr5.4:66082254-66082273 MS.gene94206:CDS 40.0%
TAGCTGAGACTCTAGCAAAA+TGG - chr5.4:66081704-66081723 MS.gene94206:CDS 40.0%
TCACGTGGATGATTTCTTTG+AGG - chr5.4:66082515-66082534 MS.gene94206:CDS 40.0%
TGAGACTCTAGCAAAATGGA+AGG - chr5.4:66081708-66081727 MS.gene94206:CDS 40.0%
TTACCTCTGAACTTCAATGG+CGG - chr5.4:66082750-66082769 MS.gene94206:CDS 40.0%
! AACTCGGAGAATAAGTATCG+AGG - chr5.4:66081838-66081857 MS.gene94206:CDS 40.0%
! AGATACACCGTTTCTGGATT+TGG - chr5.4:66082779-66082798 MS.gene94206:CDS 40.0%
! TCGAAGAAAGGGTGTATGAA+AGG - chr5.4:66081799-66081818 MS.gene94206:CDS 40.0%
!! CCAGATGGATTTTTCATGGA+TGG - chr5.4:66082437-66082456 MS.gene94206:CDS 40.0%
!! GGAAATGGGTTGCTGAAATT+AGG - chr5.4:66081881-66081900 MS.gene94206:CDS 40.0%
!! TTCTGAGGTTTGTGCTATTG+AGG - chr5.4:66082143-66082162 MS.gene94206:CDS 40.0%
!! TTTGAGGTGGATGAGCTTTT+GGG - chr5.4:66082531-66082550 MS.gene94206:CDS 40.0%
ACAAACACACGATTCTGTGC+TGG - chr5.4:66082392-66082411 MS.gene94206:CDS 45.0%
AGCACAGAATCGTGTGTTTG+TGG + chr5.4:66082393-66082412 None:intergenic 45.0%
AGCTGCTAGCTGTTGTTCTT+CGG - chr5.4:66082077-66082096 MS.gene94206:CDS 45.0%
AGGTGTTAGACAGAGGACTT+GGG - chr5.4:66081858-66081877 MS.gene94206:CDS 45.0%
AGTGGATGAGTTCTTTCACG+TGG - chr5.4:66082500-66082519 MS.gene94206:CDS 45.0%
ATCCAGATGCTAAGCTGTTG+GGG - chr5.4:66082682-66082701 MS.gene94206:CDS 45.0%
CACGATTCAAGAGGAATGCA+AGG - chr5.4:66082816-66082835 MS.gene94206:CDS 45.0%
CATATGGAACACACAGCATC+AGG - chr5.4:66082714-66082733 MS.gene94206:CDS 45.0%
CCTTTCTTCGAACCTTTAGC+CGG + chr5.4:66081790-66081809 None:intergenic 45.0%
CGGCTAAAGGTTCGAAGAAA+GGG - chr5.4:66081788-66081807 MS.gene94206:CDS 45.0%
GATATCATAGACCTTGGTGG+TGG - chr5.4:66082288-66082307 MS.gene94206:CDS 45.0%
GATGCTGTGTGTTCCATATG+AGG + chr5.4:66082714-66082733 None:intergenic 45.0%
GGGTGTATGAAAGGTAAAGG+AGG - chr5.4:66081808-66081827 MS.gene94206:CDS 45.0%
TACCTCTGAACTTCAATGGC+GGG - chr5.4:66082751-66082770 MS.gene94206:CDS 45.0%
TATGCTGCTAGAGCCATGTA+TGG - chr5.4:66081976-66081995 MS.gene94206:CDS 45.0%
! AGTATCGAGGTGTTAGACAG+AGG - chr5.4:66081851-66081870 MS.gene94206:CDS 45.0%
! CGTGGATGATTTCTTTGAGG+TGG - chr5.4:66082518-66082537 MS.gene94206:CDS 45.0%
! GTTTGAGTTCCCGATGTTTG+TGG + chr5.4:66082360-66082379 None:intergenic 45.0%
! TTGAGGTGGATGAGCTTTTG+GGG - chr5.4:66082532-66082551 MS.gene94206:CDS 45.0%
!! ACAGCATCAGGTGTCGATTA+TGG - chr5.4:66082726-66082745 MS.gene94206:CDS 45.0%
!! TTCTGGGGTGATGCAAAGTT+TGG - chr5.4:66082581-66082600 MS.gene94206:CDS 45.0%
!!! CTTTGAGGTGGATGAGCTTT+TGG - chr5.4:66082530-66082549 MS.gene94206:CDS 45.0%
ACAGAGGACTTGGGGGAAAT+GGG - chr5.4:66081867-66081886 MS.gene94206:CDS 50.0%
ACCTCTGAACTTCAATGGCG+GGG - chr5.4:66082752-66082771 MS.gene94206:CDS 50.0%
CCGGCTAAAGGTTCGAAGAA+AGG - chr5.4:66081787-66081806 MS.gene94206:CDS 50.0%
CTTGGATTTCACCACCACCA+AGG + chr5.4:66082302-66082321 None:intergenic 50.0%
GGAAAGTTAAGTCGCGCAGA+AGG + chr5.4:66082003-66082022 None:intergenic 50.0%
GGGAGAAGATACACCGTTTC+TGG - chr5.4:66082773-66082792 MS.gene94206:CDS 50.0%
GGGTGTGTGTAATGACCAGA+TGG - chr5.4:66082422-66082441 MS.gene94206:CDS 50.0%
GGTGTTAGACAGAGGACTTG+GGG - chr5.4:66081859-66081878 MS.gene94206:CDS 50.0%
GTGTTAGACAGAGGACTTGG+GGG - chr5.4:66081860-66081879 MS.gene94206:CDS 50.0%
GTTGGGGAGTTTGCCTCATA+TGG - chr5.4:66082698-66082717 MS.gene94206:CDS 50.0%
GTTGTTGTCTCAGATGTCGC+AGG + chr5.4:66082111-66082130 None:intergenic 50.0%
TAATGCTTCTCTTGCGCCGT+TGG - chr5.4:66081630-66081649 MS.gene94206:CDS 50.0%
TTAGCCGGTGCTTTACGCTT+TGG + chr5.4:66081775-66081794 None:intergenic 50.0%
! ACACACGATTCTGTGCTGGT+TGG - chr5.4:66082396-66082415 MS.gene94206:CDS 50.0%
! GAGGTGTTAGACAGAGGACT+TGG - chr5.4:66081857-66081876 MS.gene94206:CDS 50.0%
!! AAGCGTAAAGCACCGGCTAA+AGG - chr5.4:66081775-66081794 MS.gene94206:CDS 50.0%
!! GATTCTGTGCTGGTTGGAGA+GGG - chr5.4:66082402-66082421 MS.gene94206:CDS 50.0%
CCTCTGAACTTCAATGGCGG+GGG - chr5.4:66082753-66082772 MS.gene94206:CDS 55.0%
CTCCCCAACAGCTTAGCATC+TGG + chr5.4:66082687-66082706 None:intergenic 55.0%
CTTGAAGCAGTCCCAACCTG+AGG + chr5.4:66082642-66082661 None:intergenic 55.0%
GACAGAGGACTTGGGGGAAA+TGG - chr5.4:66081866-66081885 MS.gene94206:CDS 55.0%
TCGCGCAGAAGGACCATACA+TGG + chr5.4:66081992-66082011 None:intergenic 55.0%
!! CGATTCTGTGCTGGTTGGAG+AGG - chr5.4:66082401-66082420 MS.gene94206:CDS 55.0%
CCCCCGCCATTGAAGTTCAG+AGG + chr5.4:66082756-66082775 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 66081601 66082854 66081601 ID=MS.gene94206
chr5.4 mRNA 66081601 66082854 66081601 ID=MS.gene94206.t1;Parent=MS.gene94206
chr5.4 exon 66081601 66082854 66081601 ID=MS.gene94206.t1.exon1;Parent=MS.gene94206.t1
chr5.4 CDS 66081601 66082854 66081601 ID=cds.MS.gene94206.t1;Parent=MS.gene94206.t1
Gene Sequence

>MS.gene94206

ATGGGTGCTCCTGCTTATGATCAATGTTTTAATGCTTCTCTTGCGCCGTTGGAATTATCGAAAAAGAGGAAAACTAGGAGTAGAGGAAAAGGAACTAAATCTGTAGCTGAGACTCTAGCAAAATGGAAGGAATACAATGAGAAGCTTTATGCTGGTAAAGATGATGGTAAACCAAAGCGTAAAGCACCGGCTAAAGGTTCGAAGAAAGGGTGTATGAAAGGTAAAGGAGGACCTCAAAACTCGGAGAATAAGTATCGAGGTGTTAGACAGAGGACTTGGGGGAAATGGGTTGCTGAAATTAGGGAACCAAATAGAGGAAGTAGACTTTGGTTAGGTACTTTTCGGACAGCTCAAGAAGCTGCTCTTGCTTATGATTATGCTGCTAGAGCCATGTATGGTCCTTCTGCGCGACTTAACTTTCCTGATATATCGGATTATAGTTGTATTCAGGAATATTTGAAGGATTCTTCAGCAGCAGCTGCTAGCTGTTGTTCTTCGGCAACAACGCCTGCGACATCTGAGACAACAACTGTGTCTAGTCATTCTGAGGTTTGTGCTATTGAGGATGTTAAGGAGATACCTAGGATACCTGTTCATATGAACAACACTGTTGATGTTTGTTATAAAGGTTATGAAGCTACATCTCCAACTAGTAGAATGAAGCAAGAGCCAATGGATGAGCCTGATGATATCATAGACCTTGGTGGTGGTGAAATCCAAGATGTAAATTCAGAAGGAACTCAAACTCTAACACAACCACAAACATCGGGAACTCAAACTCTAACACAACCACAAACACACGATTCTGTGCTGGTTGGAGAGGGTGTGTGTAATGACCAGATGGATTTTTCATGGATGGATAACTTTGACTTCACTGATGATTATTTGAAGAGTTTTTCAGTGGATGAGTTCTTTCACGTGGATGATTTCTTTGAGGTGGATGAGCTTTTGGGGCAAATAGATAATAATCCGATTGATGATTCTGGGGTGATGCAAAGTTTGGATTTTGGACAAGTGGGTTTACCTGAAGAAAGTAATCCTCAGGTTGGGACTGCTTCAAGCTTCTTTTATGAATTGGATAATCCAGATGCTAAGCTGTTGGGGAGTTTGCCTCATATGGAACACACAGCATCAGGTGTCGATTATGGATTACCTCTGAACTTCAATGGCGGGGGAGAAGATACACCGTTTCTGGATTTGGATTATGATCTAAATCACGATTCAAGAGGAATGCAAGGAAGGAAAAATGATTAG
Protein sequence

>MS.gene94206.t1

MGAPAYDQCFNASLAPLELSKKRKTRSRGKGTKSVAETLAKWKEYNEKLYAGKDDGKPKRKAPAKGSKKGCMKGKGGPQNSENKYRGVRQRTWGKWVAEIREPNRGSRLWLGTFRTAQEAALAYDYAARAMYGPSARLNFPDISDYSCIQEYLKDSSAAAASCCSSATTPATSETTTVSSHSEVCAIEDVKEIPRIPVHMNNTVDVCYKGYEATSPTSRMKQEPMDEPDDIIDLGGGEIQDVNSEGTQTLTQPQTSGTQTLTQPQTHDSVLVGEGVCNDQMDFSWMDNFDFTDDYLKSFSVDEFFHVDDFFEVDELLGQIDNNPIDDSGVMQSLDFGQVGLPEESNPQVGTASSFFYELDNPDAKLLGSLPHMEHTASGVDYGLPLNFNGGGEDTPFLDLDYDLNHDSRGMQGRKND