AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94479

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94479.t1 MTR_2g073240 99.403 670 4 0 1 670 13 682 0.0 1390
MS.gene94479.t1 MTR_0034s0060 89.521 668 69 1 1 668 131 797 0.0 1262
MS.gene94479.t1 MTR_1g009600 74.925 666 155 2 4 669 2 655 0.0 1046
MS.gene94479.t1 MTR_4g102550 82.007 289 52 0 380 668 7 295 2.73e-174 498
MS.gene94479.t1 MTR_3g452330 52.486 181 34 1 85 265 1 129 8.07e-49 171
MS.gene94479.t1 MTR_3g452330 63.918 97 35 0 379 475 141 237 1.42e-33 129
MS.gene94479.t1 MTR_2g096660 30.573 314 189 10 9 312 40 334 7.69e-27 112
MS.gene94479.t1 MTR_4g063600 28.617 311 199 10 9 312 34 328 5.46e-26 110
MS.gene94479.t1 MTR_4g063600 28.296 311 197 11 9 312 34 325 2.36e-25 108
MS.gene94479.t1 MTR_4g120030 27.619 315 195 11 7 312 111 401 2.57e-25 109
MS.gene94479.t1 MTR_8g089180 26.243 362 218 15 1 327 63 410 1.24e-24 107
MS.gene94479.t1 MTR_8g089180 26.243 362 218 15 1 327 63 410 1.24e-24 107
MS.gene94479.t1 MTR_2g032100 25.978 358 224 13 1 327 63 410 3.86e-24 105
MS.gene94479.t1 MTR_1g088480 27.331 311 197 12 9 312 120 408 3.42e-22 100
MS.gene94479.t1 MTR_4g129820 27.193 342 208 9 8 321 96 424 4.04e-22 100
MS.gene94479.t1 MTR_4g024600 26.822 343 208 8 8 321 102 430 2.74e-20 94.7
MS.gene94479.t1 MTR_4g102270 28.274 336 212 10 7 320 93 421 2.30e-19 91.7
MS.gene94479.t1 MTR_5g011940 26.571 350 222 10 5 326 88 430 3.92e-19 90.9
MS.gene94479.t1 MTR_0354s0040 26.608 342 210 8 8 321 83 411 5.33e-19 90.5
MS.gene94479.t1 MTR_8g099535 27.066 351 217 13 7 328 4 344 1.93e-18 87.8
MS.gene94479.t1 MTR_4g134490 24.217 351 225 14 7 327 25 364 3.89e-18 87.4
MS.gene94479.t1 MTR_3g084090 26.647 334 216 10 9 320 101 427 4.26e-17 84.7
MS.gene94479.t1 MTR_4g134490 24.309 362 217 16 7 327 25 370 2.67e-16 81.6
MS.gene94479.t1 MTR_2g032100 27.778 198 128 6 1 191 63 252 1.40e-15 78.6
MS.gene94479.t1 MTR_3g105440 29.796 245 147 9 1 234 1 231 1.38e-14 77.4
MS.gene94479.t1 MTR_3g105440 29.796 245 147 9 1 234 1 231 1.43e-14 77.4
MS.gene94479.t1 MTR_1g107455 24.377 361 218 14 6 318 18 371 1.65e-14 76.3
MS.gene94479.t1 MTR_3g101500 24.280 243 169 6 7 248 2 230 2.14e-12 69.3
MS.gene94479.t1 MTR_4g056100 23.546 361 221 13 6 318 18 371 3.60e-12 68.9
MS.gene94479.t1 MTR_3g101500 24.280 243 169 6 7 248 2 230 4.14e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94479.t1 AT1G78570 88.077 671 76 2 1 669 1 669 0.0 1239
MS.gene94479.t1 AT3G14790 85.351 669 93 2 1 669 1 664 0.0 1170
MS.gene94479.t1 AT3G14790 85.351 669 93 2 1 669 4 667 0.0 1170
MS.gene94479.t1 AT1G53500 85.479 668 93 3 2 669 4 667 0.0 1161
MS.gene94479.t1 AT1G63000 83.039 283 48 0 387 669 15 297 1.51e-177 507
MS.gene94479.t1 AT2G28760 30.032 313 192 10 9 312 33 327 4.24e-28 116
MS.gene94479.t1 AT2G28760 30.032 313 192 10 9 312 33 327 4.24e-28 116
MS.gene94479.t1 AT2G28760 30.032 313 192 10 9 312 33 327 4.24e-28 116
MS.gene94479.t1 AT4G20460 27.714 350 212 12 8 327 71 409 7.05e-28 117
MS.gene94479.t1 AT2G28760 30.032 313 192 10 9 312 64 358 1.02e-27 115
MS.gene94479.t1 AT5G59290 29.712 313 193 10 9 312 3 297 1.37e-27 114
MS.gene94479.t1 AT5G59290 29.712 313 193 10 9 312 32 326 1.93e-27 114
MS.gene94479.t1 AT5G59290 29.712 313 193 10 9 312 25 319 2.22e-27 114
MS.gene94479.t1 AT5G59290 29.712 313 193 10 9 312 47 341 3.13e-27 114
MS.gene94479.t1 AT3G46440 29.393 313 194 10 9 312 31 325 4.65e-27 113
MS.gene94479.t1 AT3G46440 29.393 313 194 10 9 312 31 325 4.65e-27 113
MS.gene94479.t1 AT3G53520 27.187 320 209 10 9 321 122 424 8.90e-25 108
MS.gene94479.t1 AT3G62830 27.157 313 200 10 9 312 121 414 1.31e-24 107
MS.gene94479.t1 AT3G62830 27.157 313 200 10 9 312 121 414 1.31e-24 107
MS.gene94479.t1 AT2G47650 26.837 313 201 10 9 312 123 416 5.32e-24 105
MS.gene94479.t1 AT5G44480 26.989 352 210 15 8 326 72 409 1.22e-23 104
MS.gene94479.t1 AT5G44480 26.989 352 210 15 8 326 72 409 1.22e-23 104
MS.gene94479.t1 AT5G44480 26.989 352 210 15 8 326 72 409 1.22e-23 104
MS.gene94479.t1 AT5G44480 26.989 352 210 15 8 326 96 433 1.46e-23 104
MS.gene94479.t1 AT2G47650 26.498 317 203 10 9 312 123 422 7.38e-23 102
MS.gene94479.t1 AT1G30620 27.809 356 214 15 4 327 65 409 1.37e-22 101
MS.gene94479.t1 AT3G53520 26.875 320 208 11 9 321 122 422 1.45e-22 101
MS.gene94479.t1 AT1G30620 27.809 356 214 15 4 327 66 410 1.47e-22 101
MS.gene94479.t1 AT1G30620 27.809 356 214 15 4 327 66 410 1.47e-22 101
MS.gene94479.t1 AT1G30620 27.809 356 214 15 4 327 66 410 1.47e-22 101
MS.gene94479.t1 AT1G30620 27.809 356 214 15 4 327 66 410 1.47e-22 101
MS.gene94479.t1 AT3G53520 25.948 343 207 11 9 321 122 447 8.43e-22 99.4
MS.gene94479.t1 AT1G63180 26.331 357 222 14 1 327 1 346 1.03e-20 94.7
MS.gene94479.t1 AT4G00110 26.844 339 219 8 8 324 92 423 2.22e-20 94.7
MS.gene94479.t1 AT2G45310 26.866 335 216 9 9 321 99 426 9.76e-20 92.8
MS.gene94479.t1 AT1G02000 25.893 336 220 9 8 321 93 421 7.95e-19 90.1
MS.gene94479.t1 AT4G30440 30.901 233 151 6 8 234 89 317 2.47e-18 88.6
MS.gene94479.t1 AT1G64440 27.920 351 210 15 8 327 4 342 5.57e-18 86.7
MS.gene94479.t1 AT1G30620 30.256 195 121 6 4 191 66 252 1.33e-17 84.3
MS.gene94479.t1 AT3G53520 27.897 233 148 7 8 234 121 339 2.24e-17 84.7
MS.gene94479.t1 AT4G23920 26.163 344 219 12 7 323 3 338 3.88e-16 80.9
MS.gene94479.t1 AT1G63180 26.689 296 181 11 1 267 1 289 4.44e-16 80.1
MS.gene94479.t1 AT3G23820 26.567 335 217 10 8 320 113 440 1.53e-15 80.1
MS.gene94479.t1 AT1G47290 26.757 370 201 15 3 319 6 358 6.55e-15 77.4
MS.gene94479.t1 AT4G12250 26.100 341 223 8 3 321 92 425 1.54e-14 77.0
MS.gene94479.t1 AT1G47290 26.757 370 201 15 3 319 6 358 1.75e-14 76.6
MS.gene94479.t1 AT2G26260 26.506 249 148 8 2 234 5 234 1.75e-13 73.9
MS.gene94479.t1 AT1G73250 27.473 182 120 5 151 322 140 319 8.03e-13 70.5

Find 157 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGAATTCATTCTTCAATT+TGG 0.161081 2.1:+25312763 None:intergenic
AGGTTCAGGCATTGGGTTTA+AGG 0.187878 2.1:-25313372 MS.gene94479:CDS
GCTTACCATTGCCTTGGTTT+TGG 0.211812 2.1:+25313313 None:intergenic
TCTTTGATGGAAAGCAATTC+TGG 0.218557 2.1:+25312743 None:intergenic
TTCACCAAGAACAACATTTA+TGG 0.223050 2.1:-25314556 MS.gene94479:CDS
GTTGGACATGTTTACAATAT+TGG 0.241068 2.1:-25314133 MS.gene94479:CDS
CCCTTCACAAACTTGAAGTT+TGG 0.241790 2.1:+25314694 None:intergenic
TTTGCCATCTCAATTGAAAT+AGG 0.250438 2.1:+25312959 None:intergenic
TAGAAAGAACCGGCGAAATT+AGG 0.282017 2.1:+25313338 None:intergenic
AACCCAATGCCTGAACCTTC+TGG 0.294957 2.1:+25313377 None:intergenic
CTTGATAAGTGATTCTTTGA+TGG 0.295568 2.1:+25312730 None:intergenic
CAAGGGATTCCATATGAATA+TGG 0.304468 2.1:-25313644 MS.gene94479:CDS
TCCAAACAGCATGACTGTTT+TGG 0.309945 2.1:-25312993 MS.gene94479:CDS
CCTCTCAAGTTCTTGATCTA+TGG 0.311827 2.1:-25313713 MS.gene94479:CDS
GGTATATCAACAATCCTAAT+TGG 0.322317 2.1:-25313910 MS.gene94479:CDS
ACTCATGTCGACAACTCTTT+TGG 0.326250 2.1:-25314592 MS.gene94479:CDS
TTAGAAGCTTGCAAGGTAAC+TGG 0.328359 2.1:-25314520 MS.gene94479:CDS
TGAAGTTCCAGATACCTCTT+AGG 0.329274 2.1:+25312930 None:intergenic
TTGCTTAGGTCAGATGAAAT+TGG 0.338530 2.1:+25313067 None:intergenic
AAGTTAGCCCACTTGAAGTT+TGG 0.358387 2.1:+25312848 None:intergenic
ATCCAGAAGGTTCAGGCATT+GGG 0.362912 2.1:-25313379 MS.gene94479:CDS
CTCACATCGCCCCACCAATT+AGG 0.372048 2.1:+25313896 None:intergenic
TGAGAAGAGTTTGCAAATAT+CGG 0.373028 2.1:+25314075 None:intergenic
AGTACCATAAATGTTGTTCT+TGG 0.373878 2.1:+25314552 None:intergenic
ACACGTGGAAACAATGTCTA+TGG 0.379199 2.1:-25314313 MS.gene94479:CDS
GGAAAAGTTCTTCCGATTCA+TGG 0.380568 2.1:-25314235 MS.gene94479:CDS
TCCAAAACAGTCATGCTGTT+TGG 0.382722 2.1:+25312992 None:intergenic
TTTATTGTAACGTGAAATCT+TGG 0.382737 2.1:+25313027 None:intergenic
TTCTTGATCTATGGAAGAAC+TGG 0.390031 2.1:-25313704 MS.gene94479:CDS
AGAGGAACCTAAGAGGTATC+TGG 0.395333 2.1:-25312937 MS.gene94479:CDS
CTTTGATGGAAAGCAATTCT+GGG 0.407319 2.1:+25312744 None:intergenic
ATGTTGCCAACCGGCTTATC+CGG 0.407727 2.1:-25314801 MS.gene94479:CDS
ATCCTCATTACCGGGGCAGC+TGG 0.408875 2.1:-25314838 MS.gene94479:CDS
CAAACTCTTCTCAATTGATC+CGG 0.414049 2.1:-25314065 MS.gene94479:CDS
GGTTGGATCGGTGGTTTGCT+TGG 0.414855 2.1:-25313683 MS.gene94479:CDS
GTTGGATCGGTGGTTTGCTT+GGG 0.417488 2.1:-25313682 MS.gene94479:CDS
ACAGATGAGGATGCGGTTGT+TGG 0.419126 2.1:-25314448 MS.gene94479:CDS
TCTTGATGATCAAAAGTTGA+AGG 0.419611 2.1:-25313990 MS.gene94479:CDS
TGGTAGGTCATATGGATTAC+CGG 0.423578 2.1:-25314344 MS.gene94479:CDS
ATGGCATATGGTAGGTCATA+TGG 0.427425 2.1:-25314352 MS.gene94479:CDS
GTAAGCACTGATGAGGTCTA+TGG 0.433555 2.1:-25314475 MS.gene94479:CDS
AAGTTTGGAGATGATCTTGA+AGG 0.433792 2.1:+25314709 None:intergenic
CGGGAAGACCTAACGTTGAT+TGG 0.437127 2.1:-25313535 MS.gene94479:CDS
CATCCAGAAGGTTCAGGCAT+TGG 0.437868 2.1:-25313380 MS.gene94479:CDS
GAAGAGCCAATGCTCTTTGT+AGG 0.440799 2.1:+25313746 None:intergenic
TTGCGTCTCATGTTGCCAAC+CGG 0.441564 2.1:-25314810 MS.gene94479:CDS
ATGACAATGTATGCACTCTC+AGG 0.444077 2.1:-25313099 MS.gene94479:CDS
ATTCCATATGAATATGGAAA+AGG 0.444160 2.1:-25313638 MS.gene94479:CDS
GATTCCAAAGTTTATCCTCT+TGG 0.449266 2.1:-25314266 MS.gene94479:CDS
TAGCTAGCTTACCATTGCCT+TGG 0.452476 2.1:+25313307 None:intergenic
CGTTGTTGGGACTTTAACAT+TGG 0.453861 2.1:-25313477 MS.gene94479:CDS
GAAGCTCATCCAGAAGGTTC+AGG 0.456647 2.1:-25313386 MS.gene94479:CDS
TTCAATGCAGCAGGCGTGAC+GGG 0.457186 2.1:-25313554 MS.gene94479:CDS
TTTGAAGTTATCCTTCATAA+GGG 0.460918 2.1:-25314160 MS.gene94479:CDS
CCATCCGTGTCAACGTTGTT+GGG 0.465475 2.1:-25313490 MS.gene94479:CDS
CGCAATGAATCCAGCTGCCC+CGG 0.466589 2.1:+25314828 None:intergenic
ACCATCCGTGTCAACGTTGT+TGG 0.468379 2.1:-25313491 MS.gene94479:CDS
TCGTTGTGGCTCACGGCGCC+AGG 0.468437 2.1:+25312902 None:intergenic
ATCTGGAACTTCACAAATCC+TGG 0.470303 2.1:-25312920 MS.gene94479:CDS
AAGTACCTCTGATCATTAAA+CGG 0.474090 2.1:+25314013 None:intergenic
GTTGAAGGTGTTGGGTTGGT+CGG 0.479058 2.1:-25313975 MS.gene94479:CDS
CCGTACTCTGCTACAAAAGC+TGG 0.481124 2.1:-25314391 MS.gene94479:CDS
GAAATGCTCGTCATGGCATA+TGG 0.483670 2.1:-25314364 MS.gene94479:CDS
TTACAATATTGGAACTAAGA+AGG 0.484035 2.1:-25314122 MS.gene94479:CDS
GAGATGATCTTGAAGGAATG+AGG 0.489742 2.1:+25314716 None:intergenic
TCTTCCTATTTCAATTGAGA+TGG 0.498900 2.1:-25312963 MS.gene94479:CDS
TCTTGCAGCAACTATCACTT+TGG 0.499126 2.1:+25312808 None:intergenic
ATCCTTCATAAGGGAGAGGT+TGG 0.502469 2.1:-25314151 MS.gene94479:CDS
TGATCAAAAGTTGAAGGTGT+TGG 0.502706 2.1:-25313984 MS.gene94479:CDS
AGACCTCATCAGTGCTTACA+TGG 0.502767 2.1:+25314479 None:intergenic
GATCAAAAGTTGAAGGTGTT+GGG 0.504012 2.1:-25313983 MS.gene94479:CDS
TTCCATATGAATATGGAAAA+GGG 0.506901 2.1:-25313637 MS.gene94479:CDS
TAGCATAGTTCATCATCAAA+AGG 0.516883 2.1:+25313432 None:intergenic
GTTCTTCCGATTCATGGTGA+TGG 0.517259 2.1:-25314229 MS.gene94479:CDS
GTAGCAGAGTACGGATTTGT+CGG 0.517951 2.1:+25314400 None:intergenic
TGCAAGAAGCAACAATGAAA+TGG 0.518316 2.1:-25312792 MS.gene94479:CDS
ATTGCCAAGAGGATAAACTT+TGG 0.524782 2.1:+25314262 None:intergenic
TGAAATTGCGTGGATTGCTT+AGG 0.528340 2.1:+25313053 None:intergenic
TCCAAACTTCAAGTTTGTGA+AGG 0.531089 2.1:-25314695 MS.gene94479:CDS
TTTCCACGTGTTGTGATCAC+CGG 0.531578 2.1:+25314325 None:intergenic
TTGATGATGAACTATGCTAC+CGG 0.533136 2.1:-25313428 MS.gene94479:CDS
GGGAAATTGTGTGAGAAACA+AGG 0.534485 2.1:-25313662 MS.gene94479:CDS
TTTGAACCATCACCATGAAT+CGG 0.534712 2.1:+25314223 None:intergenic
TTTATCCTCTTGGCAATGCA+AGG 0.535363 2.1:-25314256 MS.gene94479:CDS
GAGAGAACAACATGGGAAGA+AGG 0.538587 2.1:-25313953 MS.gene94479:CDS
TATCAACAATCCTAATTGGT+GGG 0.540325 2.1:-25313906 MS.gene94479:CDS
GTCCAACCTCTCCCTTATGA+AGG 0.542052 2.1:+25314149 None:intergenic
TGATCTATGGAAGAACTGGT+TGG 0.542351 2.1:-25313700 MS.gene94479:CDS
ATTGTTGATATACCAGTCCA+TGG 0.546234 2.1:+25313919 None:intergenic
CCAAACTTCAAGTTTGTGAA+GGG 0.547634 2.1:-25314694 MS.gene94479:CDS
GGAAGAACTGGTTGGATCGG+TGG 0.548201 2.1:-25313692 MS.gene94479:CDS
CCGAAAATGTTAATGATGCC+TGG 0.549298 2.1:-25313854 MS.gene94479:CDS
GTTAATGATGCCTGGTGGGA+TGG 0.550016 2.1:-25313846 MS.gene94479:CDS
CGGGATAGTTCCGGATAAGC+CGG 0.551283 2.1:+25314791 None:intergenic
GATTCACACCAATCAACGTT+AGG 0.551310 2.1:+25313527 None:intergenic
ATCCAGCTGCCCCGGTAATG+AGG 0.552923 2.1:+25314836 None:intergenic
GGATGGAGAGACATTTCAAT+GGG 0.556466 2.1:-25313829 MS.gene94479:CDS
TTCTTTCTATTCCAAAACCA+AGG 0.556902 2.1:-25313324 MS.gene94479:CDS
CCCAACAACGTTGACACGGA+TGG 0.559674 2.1:+25313490 None:intergenic
TTTCAATGCAGCAGGCGTGA+CGG 0.562169 2.1:-25313555 MS.gene94479:CDS
AGTTATCCTTCATAAGGGAG+AGG 0.562307 2.1:-25314155 MS.gene94479:CDS
CAATAGACTCAGTGATGAGA+AGG 0.562592 2.1:+25314641 None:intergenic
GGAAATTGTGTGAGAAACAA+GGG 0.564756 2.1:-25313661 MS.gene94479:CDS
AAAAGTTGAAGGTGTTGGGT+TGG 0.566545 2.1:-25313979 MS.gene94479:CDS
CTATTCCAAAACCAAGGCAA+TGG 0.566752 2.1:-25313318 MS.gene94479:intron
AAATGTCTCTCCATCCCACC+AGG 0.569236 2.1:+25313836 None:intergenic
GGGATGGAGAGACATTTCAA+TGG 0.570949 2.1:-25313830 MS.gene94479:CDS
GAAGACACTCCTAATTTCGC+CGG 0.574480 2.1:-25313347 MS.gene94479:CDS
ACATTGATCCAAACTTCAAG+TGG 0.579567 2.1:-25312856 MS.gene94479:CDS
CTCAAGTACTAATACTCGAA+TGG 0.579731 2.1:-25313777 MS.gene94479:CDS
TGTCTTATTAGAAGCTTGCA+AGG 0.580370 2.1:-25314527 MS.gene94479:CDS
ATATCAACAATCCTAATTGG+TGG 0.585366 2.1:-25313907 MS.gene94479:CDS
TGGAGAGACAGATGAGGATG+CGG 0.589535 2.1:-25314455 MS.gene94479:CDS
TGCTCGTCATGGCATATGGT+AGG 0.590673 2.1:-25314360 MS.gene94479:CDS
TATGGAAGAACTGGTTGGAT+CGG 0.593876 2.1:-25313695 MS.gene94479:CDS
GAGCCAATGCTCTTTGTAGG+TGG 0.595767 2.1:+25313749 None:intergenic
GTTCCACCTACAAAGAGCAT+TGG 0.596551 2.1:-25313752 MS.gene94479:CDS
TGAGGATCGTTCATCACTCG+TGG 0.597692 2.1:-25313609 MS.gene94479:CDS
CCATAGATCAAGAACTTGAG+AGG 0.598084 2.1:+25313713 None:intergenic
ATCAACAATCCTAATTGGTG+GGG 0.599048 2.1:-25313905 MS.gene94479:CDS
GAAGTAGCTGAGAAGCCTCA+TGG 0.602039 2.1:+25314422 None:intergenic
GCTTGAAGAAAACCATGGAC+TGG 0.603416 2.1:-25313931 MS.gene94479:CDS
GTATTAGTACTTGAGACAAA+CGG 0.603642 2.1:+25313785 None:intergenic
GAGAATCTCGTTGTGGCTCA+CGG 0.604501 2.1:+25312895 None:intergenic
GCTGCATTGAAAATATGAGT+TGG 0.607206 2.1:+25313566 None:intergenic
ATCATACTCGAATATGCACC+CGG 0.611680 2.1:+25313409 None:intergenic
AACAGTAATCGAGTTTGTCG+AGG 0.615310 2.1:+25314752 None:intergenic
TGATGATGAACTATGCTACC+GGG 0.618950 2.1:-25313427 MS.gene94479:CDS
ATGGCAAAGAGGAACCTAAG+AGG 0.622901 2.1:-25312944 MS.gene94479:CDS
TATGATGAAGCTCATCCAGA+AGG 0.624291 2.1:-25313392 MS.gene94479:CDS
TGGAGCAGAAATGCTCGTCA+TGG 0.624307 2.1:-25314371 MS.gene94479:CDS
ATATTGGAACTAAGAAGGAA+AGG 0.626669 2.1:-25314117 MS.gene94479:CDS
TTTCAATTGAGATGGCAAAG+AGG 0.627252 2.1:-25312955 MS.gene94479:CDS
CATCCATGTAAGCACTGATG+AGG 0.632531 2.1:-25314482 MS.gene94479:CDS
AAGTCCCAACAACGTTGACA+CGG 0.632986 2.1:+25313486 None:intergenic
ATAGTTCCGGATAAGCCGGT+TGG 0.636641 2.1:+25314795 None:intergenic
AATTGGTGGGGCGATGTGAG+TGG 0.640742 2.1:-25313893 MS.gene94479:CDS
ATCTTGGTGATGAAATTGCG+TGG 0.642464 2.1:+25313043 None:intergenic
GAAGAGTTTGCAAATATCGG+TGG 0.643094 2.1:+25314078 None:intergenic
ATATGGAAAAGGGCGTCTTG+AGG 0.643401 2.1:-25313627 MS.gene94479:CDS
TGATGAGAAGGTAGTTGACA+AGG 0.649249 2.1:+25314653 None:intergenic
GTATTGTGAAGATGTTGCTG+AGG 0.651119 2.1:-25314185 MS.gene94479:CDS
AGAAGGCTTGAAGAAAACCA+TGG 0.651189 2.1:-25313936 MS.gene94479:CDS
TGACAATGTATGCACTCTCA+GGG 0.651558 2.1:-25313098 MS.gene94479:CDS
GGTCTATGGAGAGACAGATG+AGG 0.654888 2.1:-25314461 MS.gene94479:CDS
CATTGATCCAAACTTCAAGT+GGG 0.662099 2.1:-25312855 MS.gene94479:CDS
TAGATCAAGAACTTGAGAGG+AGG 0.663040 2.1:+25313716 None:intergenic
ACATCTCGAGAATCTCGTTG+TGG 0.664572 2.1:+25312888 None:intergenic
AAGTACTAATACTCGAATGG+TGG 0.665787 2.1:-25313774 MS.gene94479:CDS
AAATGTTAATGATGCCTGGT+GGG 0.666092 2.1:-25313850 MS.gene94479:CDS
ACAGACCGTTTAATGATCAG+AGG 0.666147 2.1:-25314018 MS.gene94479:CDS
TGCGGTTGTTGGAAACCATG+AGG 0.672360 2.1:-25314437 MS.gene94479:CDS
TTACCGGTGATCACAACACG+TGG 0.677722 2.1:-25314328 MS.gene94479:CDS
TTGGTCGGAGAGAACAACAT+GGG 0.701272 2.1:-25313960 MS.gene94479:CDS
ATGGTGATGGTTCAAATGTG+AGG 0.706627 2.1:-25314216 MS.gene94479:CDS
GTTGGTCGGAGAGAACAACA+TGG 0.719943 2.1:-25313961 MS.gene94479:CDS
AAAATGTTAATGATGCCTGG+TGG 0.736377 2.1:-25313851 MS.gene94479:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCATAATCATAATGAAAA+CGG + chr2.1:25314384-25314403 None:intergenic 15.0%
!! AAAAAAAAAAGGAATCAGAA+TGG + chr2.1:25314306-25314325 None:intergenic 20.0%
! ATTCCATATGAATATGGAAA+AGG - chr2.1:25313921-25313940 MS.gene94479:CDS 25.0%
! CCTCGATTTCAAAAAAAAAA+AGG + chr2.1:25314317-25314336 None:intergenic 25.0%
! TTACAATATTGGAACTAAGA+AGG - chr2.1:25313437-25313456 MS.gene94479:CDS 25.0%
! TTCCATATGAATATGGAAAA+GGG - chr2.1:25313922-25313941 MS.gene94479:CDS 25.0%
! TTTATTGTAACGTGAAATCT+TGG + chr2.1:25314535-25314554 None:intergenic 25.0%
!! TTTGAAGTTATCCTTCATAA+GGG - chr2.1:25313399-25313418 MS.gene94479:CDS 25.0%
!!! ACAAATTTTATACTAGTCTC+CGG + chr2.1:25313516-25313535 None:intergenic 25.0%
!!! CCTTTTTTTTTTTGAAATCG+AGG - chr2.1:25314314-25314333 MS.gene94479:CDS 25.0%
!!! TTTTGAAGTTATCCTTCATA+AGG - chr2.1:25313398-25313417 MS.gene94479:CDS 25.0%
AAGTACCTCTGATCATTAAA+CGG + chr2.1:25313549-25313568 None:intergenic 30.0%
AGTACCATAAATGTTGTTCT+TGG + chr2.1:25313010-25313029 None:intergenic 30.0%
ATATCAACAATCCTAATTGG+TGG - chr2.1:25313652-25313671 MS.gene94479:CDS 30.0%
ATATTGGAACTAAGAAGGAA+AGG - chr2.1:25313442-25313461 MS.gene94479:CDS 30.0%
CTTGATAAGTGATTCTTTGA+TGG + chr2.1:25314832-25314851 None:intergenic 30.0%
GGTATATCAACAATCCTAAT+TGG - chr2.1:25313649-25313668 MS.gene94479:CDS 30.0%
GTATTAGTACTTGAGACAAA+CGG + chr2.1:25313777-25313796 None:intergenic 30.0%
GTTGGACATGTTTACAATAT+TGG - chr2.1:25313426-25313445 MS.gene94479:CDS 30.0%
TAGCATAGTTCATCATCAAA+AGG + chr2.1:25314130-25314149 None:intergenic 30.0%
TATCAACAATCCTAATTGGT+GGG - chr2.1:25313653-25313672 MS.gene94479:CDS 30.0%
TCTTCCTATTTCAATTGAGA+TGG - chr2.1:25314596-25314615 MS.gene94479:CDS 30.0%
TGAGAAGAGTTTGCAAATAT+CGG + chr2.1:25313487-25313506 None:intergenic 30.0%
TGGGAATTCATTCTTCAATT+TGG + chr2.1:25314799-25314818 None:intergenic 30.0%
TTAATCTGTGAATGTTTCTC+AGG - chr2.1:25314416-25314435 MS.gene94479:CDS 30.0%
TTCACCAAGAACAACATTTA+TGG - chr2.1:25313003-25313022 MS.gene94479:CDS 30.0%
TTCTTTCTATTCCAAAACCA+AGG - chr2.1:25314235-25314254 MS.gene94479:CDS 30.0%
TTTGCCATCTCAATTGAAAT+AGG + chr2.1:25314603-25314622 None:intergenic 30.0%
! ATCATTAACATTTTCGGATG+AGG + chr2.1:25313702-25313721 None:intergenic 30.0%
! TCTTGATGATCAAAAGTTGA+AGG - chr2.1:25313569-25313588 MS.gene94479:CDS 30.0%
! TTGAACAAGATTTGTTCAAC+AGG + chr2.1:25314355-25314374 None:intergenic 30.0%
!! AACTTTTCAGGAAACTGATT+CGG + chr2.1:25313273-25313292 None:intergenic 30.0%
!!! AACTTTGGAATCAACTTTTC+AGG + chr2.1:25313285-25313304 None:intergenic 30.0%
AAAAAACATCCTCATTACCG+GGG - chr2.1:25312714-25312733 MS.gene94479:CDS 35.0%
AAAATGTTAATGATGCCTGG+TGG - chr2.1:25313708-25313727 MS.gene94479:CDS 35.0%
AAATGTTAATGATGCCTGGT+GGG - chr2.1:25313709-25313728 MS.gene94479:CDS 35.0%
AAGTACTAATACTCGAATGG+TGG - chr2.1:25313785-25313804 MS.gene94479:CDS 35.0%
AAGTTTGGAGATGATCTTGA+AGG + chr2.1:25312853-25312872 None:intergenic 35.0%
ACATTGATCCAAACTTCAAG+TGG - chr2.1:25314703-25314722 MS.gene94479:CDS 35.0%
ATCAACAATCCTAATTGGTG+GGG - chr2.1:25313654-25313673 MS.gene94479:CDS 35.0%
ATTGCCAAGAGGATAAACTT+TGG + chr2.1:25313300-25313319 None:intergenic 35.0%
ATTGTTGATATACCAGTCCA+TGG + chr2.1:25313643-25313662 None:intergenic 35.0%
CAAAAAACATCCTCATTACC+GGG - chr2.1:25312713-25312732 MS.gene94479:CDS 35.0%
CAAACTCTTCTCAATTGATC+CGG - chr2.1:25313494-25313513 MS.gene94479:CDS 35.0%
CAAGGGATTCCATATGAATA+TGG - chr2.1:25313915-25313934 MS.gene94479:CDS 35.0%
CATTGATCCAAACTTCAAGT+GGG - chr2.1:25314704-25314723 MS.gene94479:CDS 35.0%
CCAAAAAACATCCTCATTAC+CGG - chr2.1:25312712-25312731 MS.gene94479:CDS 35.0%
CTCAAGTACTAATACTCGAA+TGG - chr2.1:25313782-25313801 MS.gene94479:CDS 35.0%
CTTTGATGGAAAGCAATTCT+GGG + chr2.1:25314818-25314837 None:intergenic 35.0%
GATTCCAAAGTTTATCCTCT+TGG - chr2.1:25313293-25313312 MS.gene94479:intron 35.0%
GCTGCATTGAAAATATGAGT+TGG + chr2.1:25313996-25314015 None:intergenic 35.0%
GGAAATTGTGTGAGAAACAA+GGG - chr2.1:25313898-25313917 MS.gene94479:CDS 35.0%
TCTTTGATGGAAAGCAATTC+TGG + chr2.1:25314819-25314838 None:intergenic 35.0%
TGCAAGAAGCAACAATGAAA+TGG - chr2.1:25314767-25314786 MS.gene94479:CDS 35.0%
TTCTTGATCTATGGAAGAAC+TGG - chr2.1:25313855-25313874 MS.gene94479:CDS 35.0%
TTGCTTAGGTCAGATGAAAT+TGG + chr2.1:25314495-25314514 None:intergenic 35.0%
TTTCAATTGAGATGGCAAAG+AGG - chr2.1:25314604-25314623 MS.gene94479:CDS 35.0%
TTTGAACCATCACCATGAAT+CGG + chr2.1:25313339-25313358 None:intergenic 35.0%
! ACTCATATTTTCAATGCAGC+AGG - chr2.1:25313996-25314015 MS.gene94479:CDS 35.0%
! AGGACAACAATTTTGTAGTC+GGG + chr2.1:25312790-25312809 None:intergenic 35.0%
! CATGGATGAATCTTTTGATC+TGG + chr2.1:25313065-25313084 None:intergenic 35.0%
! CCAAACTTCAAGTTTGTGAA+GGG - chr2.1:25312865-25312884 MS.gene94479:CDS 35.0%
! CCAGGCATCATTAACATTTT+CGG + chr2.1:25313708-25313727 None:intergenic 35.0%
! GAGGACAACAATTTTGTAGT+CGG + chr2.1:25312791-25312810 None:intergenic 35.0%
! TCCAAACTTCAAGTTTGTGA+AGG - chr2.1:25312864-25312883 MS.gene94479:CDS 35.0%
! TGATCAAAAGTTGAAGGTGT+TGG - chr2.1:25313575-25313594 MS.gene94479:CDS 35.0%
! TGTCTTATTAGAAGCTTGCA+AGG - chr2.1:25313032-25313051 MS.gene94479:CDS 35.0%
!! ACTTTTCAGGAAACTGATTC+GGG + chr2.1:25313272-25313291 None:intergenic 35.0%
!! GATCAAAAGTTGAAGGTGTT+GGG - chr2.1:25313576-25313595 MS.gene94479:CDS 35.0%
!! TTGATGATGAACTATGCTAC+CGG - chr2.1:25314131-25314150 MS.gene94479:CDS 35.0%
!!! CGGTAATGAGGATGTTTTTT+GGG + chr2.1:25312714-25312733 None:intergenic 35.0%
!!! GGTAATGAGGATGTTTTTTG+GGG + chr2.1:25312713-25312732 None:intergenic 35.0%
!!! GGTTTTGGAATAGAAAGAAC+CGG + chr2.1:25314234-25314253 None:intergenic 35.0%
AACAGTAATCGAGTTTGTCG+AGG + chr2.1:25312810-25312829 None:intergenic 40.0%
AAGTTAGCCCACTTGAAGTT+TGG + chr2.1:25314714-25314733 None:intergenic 40.0%
ACACGTGGAAACAATGTCTA+TGG - chr2.1:25313246-25313265 MS.gene94479:intron 40.0%
ACAGACCGTTTAATGATCAG+AGG - chr2.1:25313541-25313560 MS.gene94479:CDS 40.0%
AGAAGGCTTGAAGAAAACCA+TGG - chr2.1:25313623-25313642 MS.gene94479:CDS 40.0%
AGTTATCCTTCATAAGGGAG+AGG - chr2.1:25313404-25313423 MS.gene94479:CDS 40.0%
ATCATACTCGAATATGCACC+CGG + chr2.1:25314153-25314172 None:intergenic 40.0%
ATGACAATGTATGCACTCTC+AGG - chr2.1:25314460-25314479 MS.gene94479:CDS 40.0%
ATGGCATATGGTAGGTCATA+TGG - chr2.1:25313207-25313226 MS.gene94479:intron 40.0%
CAATAGACTCAGTGATGAGA+AGG + chr2.1:25312921-25312940 None:intergenic 40.0%
CCATAGATCAAGAACTTGAG+AGG + chr2.1:25313849-25313868 None:intergenic 40.0%
CCCTTCACAAACTTGAAGTT+TGG + chr2.1:25312868-25312887 None:intergenic 40.0%
CCGAAAATGTTAATGATGCC+TGG - chr2.1:25313705-25313724 MS.gene94479:CDS 40.0%
CCTCTCAAGTTCTTGATCTA+TGG - chr2.1:25313846-25313865 MS.gene94479:CDS 40.0%
CGTTGTTGGGACTTTAACAT+TGG - chr2.1:25314082-25314101 MS.gene94479:CDS 40.0%
CTATTCCAAAACCAAGGCAA+TGG - chr2.1:25314241-25314260 MS.gene94479:CDS 40.0%
GAAGAGTTTGCAAATATCGG+TGG + chr2.1:25313484-25313503 None:intergenic 40.0%
GAGATGATCTTGAAGGAATG+AGG + chr2.1:25312846-25312865 None:intergenic 40.0%
GATTCACACCAATCAACGTT+AGG + chr2.1:25314035-25314054 None:intergenic 40.0%
GGAAAAGTTCTTCCGATTCA+TGG - chr2.1:25313324-25313343 MS.gene94479:CDS 40.0%
GGATGGAGAGACATTTCAAT+GGG - chr2.1:25313730-25313749 MS.gene94479:CDS 40.0%
GGGAAATTGTGTGAGAAACA+AGG - chr2.1:25313897-25313916 MS.gene94479:CDS 40.0%
GTATTGTGAAGATGTTGCTG+AGG - chr2.1:25313374-25313393 MS.gene94479:CDS 40.0%
TAGAAAGAACCGGCGAAATT+AGG + chr2.1:25314224-25314243 None:intergenic 40.0%
TAGATCAAGAACTTGAGAGG+AGG + chr2.1:25313846-25313865 None:intergenic 40.0%
TATGATGAAGCTCATCCAGA+AGG - chr2.1:25314167-25314186 MS.gene94479:CDS 40.0%
TATGGAAGAACTGGTTGGAT+CGG - chr2.1:25313864-25313883 MS.gene94479:CDS 40.0%
TCCAAAACAGTCATGCTGTT+TGG + chr2.1:25314570-25314589 None:intergenic 40.0%
TCTTGCAGCAACTATCACTT+TGG + chr2.1:25314754-25314773 None:intergenic 40.0%
TGAAGTTCCAGATACCTCTT+AGG + chr2.1:25314632-25314651 None:intergenic 40.0%
TGACAATGTATGCACTCTCA+GGG - chr2.1:25314461-25314480 MS.gene94479:CDS 40.0%
TGATCTATGGAAGAACTGGT+TGG - chr2.1:25313859-25313878 MS.gene94479:CDS 40.0%
TGATGAGAAGGTAGTTGACA+AGG + chr2.1:25312909-25312928 None:intergenic 40.0%
TTAGAAGCTTGCAAGGTAAC+TGG - chr2.1:25313039-25313058 MS.gene94479:CDS 40.0%
TTTATCCTCTTGGCAATGCA+AGG - chr2.1:25313303-25313322 MS.gene94479:intron 40.0%
! ACTCATGTCGACAACTCTTT+TGG - chr2.1:25312967-25312986 MS.gene94479:CDS 40.0%
! ATCTGGAACTTCACAAATCC+TGG - chr2.1:25314639-25314658 MS.gene94479:CDS 40.0%
! CGCCCTTTTCCATATTCATA+TGG + chr2.1:25313927-25313946 None:intergenic 40.0%
! TCCAAACAGCATGACTGTTT+TGG - chr2.1:25314566-25314585 MS.gene94479:CDS 40.0%
! TGAAATTGCGTGGATTGCTT+AGG + chr2.1:25314509-25314528 None:intergenic 40.0%
! TGATGATGAACTATGCTACC+GGG - chr2.1:25314132-25314151 MS.gene94479:CDS 40.0%
! TGGTAGGTCATATGGATTAC+CGG - chr2.1:25313215-25313234 MS.gene94479:intron 40.0%
! TTTTGTAGTCGGGATAGTTC+CGG + chr2.1:25312780-25312799 None:intergenic 40.0%
!! AAAAGTTGAAGGTGTTGGGT+TGG - chr2.1:25313580-25313599 MS.gene94479:CDS 40.0%
!! ATCTTGGTGATGAAATTGCG+TGG + chr2.1:25314519-25314538 None:intergenic 40.0%
!! ATGGTGATGGTTCAAATGTG+AGG - chr2.1:25313343-25313362 MS.gene94479:CDS 40.0%
!!! CCGGTAATGAGGATGTTTTT+TGG + chr2.1:25312715-25312734 None:intergenic 40.0%
AAGTCCCAACAACGTTGACA+CGG + chr2.1:25314076-25314095 None:intergenic 45.0%
ACATCTCGAGAATCTCGTTG+TGG + chr2.1:25314674-25314693 None:intergenic 45.0%
AGACCTCATCAGTGCTTACA+TGG + chr2.1:25313083-25313102 None:intergenic 45.0%
ATCCAGAAGGTTCAGGCATT+GGG - chr2.1:25314180-25314199 MS.gene94479:CDS 45.0%
ATCCTTCATAAGGGAGAGGT+TGG - chr2.1:25313408-25313427 MS.gene94479:CDS 45.0%
ATGGCAAAGAGGAACCTAAG+AGG - chr2.1:25314615-25314634 MS.gene94479:CDS 45.0%
GAAATGCTCGTCATGGCATA+TGG - chr2.1:25313195-25313214 MS.gene94479:intron 45.0%
GAAGACACTCCTAATTTCGC+CGG - chr2.1:25314212-25314231 MS.gene94479:CDS 45.0%
GAAGAGCCAATGCTCTTTGT+AGG + chr2.1:25313816-25313835 None:intergenic 45.0%
GAGAGAACAACATGGGAAGA+AGG - chr2.1:25313606-25313625 MS.gene94479:CDS 45.0%
GCTTGAAGAAAACCATGGAC+TGG - chr2.1:25313628-25313647 MS.gene94479:CDS 45.0%
GGGATGGAGAGACATTTCAA+TGG - chr2.1:25313729-25313748 MS.gene94479:CDS 45.0%
GTAGCAGAGTACGGATTTGT+CGG + chr2.1:25313162-25313181 None:intergenic 45.0%
GTTCTTCCGATTCATGGTGA+TGG - chr2.1:25313330-25313349 MS.gene94479:CDS 45.0%
TTGGTCGGAGAGAACAACAT+GGG - chr2.1:25313599-25313618 MS.gene94479:CDS 45.0%
TTTCCACGTGTTGTGATCAC+CGG + chr2.1:25313237-25313256 None:intergenic 45.0%
! CCAGCTTTTGTAGCAGAGTA+CGG + chr2.1:25313171-25313190 None:intergenic 45.0%
! CTTTTCCTTGCATTGCCAAG+AGG + chr2.1:25313311-25313330 None:intergenic 45.0%
! GCTTACCATTGCCTTGGTTT+TGG + chr2.1:25314249-25314268 None:intergenic 45.0%
! GTTCCACCTACAAAGAGCAT+TGG - chr2.1:25313807-25313826 MS.gene94479:CDS 45.0%
! TAGCTAGCTTACCATTGCCT+TGG + chr2.1:25314255-25314274 None:intergenic 45.0%
!! AGAGGAACCTAAGAGGTATC+TGG - chr2.1:25314622-25314641 MS.gene94479:CDS 45.0%
!! AGGTTCAGGCATTGGGTTTA+AGG - chr2.1:25314187-25314206 MS.gene94479:CDS 45.0%
!! ATATGGAAAAGGGCGTCTTG+AGG - chr2.1:25313932-25313951 MS.gene94479:CDS 45.0%
!! CATCCATGTAAGCACTGATG+AGG - chr2.1:25313077-25313096 MS.gene94479:CDS 45.0%
!! GTAAGCACTGATGAGGTCTA+TGG - chr2.1:25313084-25313103 MS.gene94479:CDS 45.0%
AAATGTCTCTCCATCCCACC+AGG + chr2.1:25313726-25313745 None:intergenic 50.0%
AACCCAATGCCTGAACCTTC+TGG + chr2.1:25314185-25314204 None:intergenic 50.0%
ACAGATGAGGATGCGGTTGT+TGG - chr2.1:25313111-25313130 MS.gene94479:CDS 50.0%
ACCATCCGTGTCAACGTTGT+TGG - chr2.1:25314068-25314087 MS.gene94479:CDS 50.0%
ATAGTTCCGGATAAGCCGGT+TGG + chr2.1:25312767-25312786 None:intergenic 50.0%
CATCCAGAAGGTTCAGGCAT+TGG - chr2.1:25314179-25314198 MS.gene94479:CDS 50.0%
CCATCCGTGTCAACGTTGTT+GGG - chr2.1:25314069-25314088 MS.gene94479:CDS 50.0%
CCGTACTCTGCTACAAAAGC+TGG - chr2.1:25313168-25313187 MS.gene94479:intron 50.0%
CGGGAAGACCTAACGTTGAT+TGG - chr2.1:25314024-25314043 MS.gene94479:CDS 50.0%
GAAGCTCATCCAGAAGGTTC+AGG - chr2.1:25314173-25314192 MS.gene94479:CDS 50.0%
GAAGTAGCTGAGAAGCCTCA+TGG + chr2.1:25313140-25313159 None:intergenic 50.0%
GAGAATCTCGTTGTGGCTCA+CGG + chr2.1:25314667-25314686 None:intergenic 50.0%
GAGCCAATGCTCTTTGTAGG+TGG + chr2.1:25313813-25313832 None:intergenic 50.0%
GGTCTATGGAGAGACAGATG+AGG - chr2.1:25313098-25313117 MS.gene94479:CDS 50.0%
GTCCAACCTCTCCCTTATGA+AGG + chr2.1:25313413-25313432 None:intergenic 50.0%
GTTAATGATGCCTGGTGGGA+TGG - chr2.1:25313713-25313732 MS.gene94479:CDS 50.0%
GTTGGTCGGAGAGAACAACA+TGG - chr2.1:25313598-25313617 MS.gene94479:CDS 50.0%
TGAGGATCGTTCATCACTCG+TGG - chr2.1:25313950-25313969 MS.gene94479:CDS 50.0%
TGCGGTTGTTGGAAACCATG+AGG - chr2.1:25313122-25313141 MS.gene94479:CDS 50.0%
TGCTCGTCATGGCATATGGT+AGG - chr2.1:25313199-25313218 MS.gene94479:intron 50.0%
TGGAGAGACAGATGAGGATG+CGG - chr2.1:25313104-25313123 MS.gene94479:CDS 50.0%
TGGAGCAGAAATGCTCGTCA+TGG - chr2.1:25313188-25313207 MS.gene94479:intron 50.0%
TTACCGGTGATCACAACACG+TGG - chr2.1:25313231-25313250 MS.gene94479:intron 50.0%
TTGCGTCTCATGTTGCCAAC+CGG - chr2.1:25312749-25312768 MS.gene94479:CDS 50.0%
TTTCAATGCAGCAGGCGTGA+CGG - chr2.1:25314004-25314023 MS.gene94479:CDS 50.0%
! ATGTTGCCAACCGGCTTATC+CGG - chr2.1:25312758-25312777 MS.gene94479:CDS 50.0%
!! GTTGAAGGTGTTGGGTTGGT+CGG - chr2.1:25313584-25313603 MS.gene94479:CDS 50.0%
!! GTTGGATCGGTGGTTTGCTT+GGG - chr2.1:25313877-25313896 MS.gene94479:CDS 50.0%
AATTGGTGGGGCGATGTGAG+TGG - chr2.1:25313666-25313685 MS.gene94479:CDS 55.0%
CCCAACAACGTTGACACGGA+TGG + chr2.1:25314072-25314091 None:intergenic 55.0%
CGGGATAGTTCCGGATAAGC+CGG + chr2.1:25312771-25312790 None:intergenic 55.0%
CTCACATCGCCCCACCAATT+AGG + chr2.1:25313666-25313685 None:intergenic 55.0%
GGAAGAACTGGTTGGATCGG+TGG - chr2.1:25313867-25313886 MS.gene94479:CDS 55.0%
TTCAATGCAGCAGGCGTGAC+GGG - chr2.1:25314005-25314024 MS.gene94479:CDS 55.0%
!! GGTTGGATCGGTGGTTTGCT+TGG - chr2.1:25313876-25313895 MS.gene94479:CDS 55.0%
ATCCAGCTGCCCCGGTAATG+AGG + chr2.1:25312726-25312745 None:intergenic 60.0%
ATCCTCATTACCGGGGCAGC+TGG - chr2.1:25312721-25312740 MS.gene94479:CDS 60.0%
CGCAATGAATCCAGCTGCCC+CGG + chr2.1:25312734-25312753 None:intergenic 60.0%
TCGTTGTGGCTCACGGCGCC+AGG + chr2.1:25314660-25314679 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 25312697 25314884 25312697 ID=MS.gene94479
chr2.1 mRNA 25312697 25314884 25312697 ID=MS.gene94479.t1;Parent=MS.gene94479
chr2.1 exon 25313319 25314884 25313319 ID=MS.gene94479.t1.exon1;Parent=MS.gene94479.t1
chr2.1 CDS 25313319 25314884 25313319 ID=cds.MS.gene94479.t1;Parent=MS.gene94479.t1
chr2.1 exon 25312697 25313143 25312697 ID=MS.gene94479.t1.exon2;Parent=MS.gene94479.t1
chr2.1 CDS 25312697 25313143 25312697 ID=cds.MS.gene94479.t1;Parent=MS.gene94479.t1
Gene Sequence

>MS.gene94479

ATGGCAACGCACACCCCAAAAAACATCCTCATTACCGGGGCAGCTGGATTCATTGCGTCTCATGTTGCCAACCGGCTTATCCGGAACTATCCCGACTACAAAATTGTTGTCCTCGACAAACTCGATTACTGTTCTAATCTGAAGAACCTCATTCCTTCAAGATCATCTCCAAACTTCAAGTTTGTGAAGGGAGACATTGAAAGTGCTGACCTTGTCAACTACCTTCTCATCACTGAGTCTATTGACACAATTATGCATTTTGCTGCTCAAACTCATGTCGACAACTCTTTTGGTAACAGCTTTGAGTTCACCAAGAACAACATTTATGGTACTCATGTCTTATTAGAAGCTTGCAAGGTAACTGGCCAGATCAAAAGATTCATCCATGTAAGCACTGATGAGGTCTATGGAGAGACAGATGAGGATGCGGTTGTTGGAAACCATGAGGCTTCTCAGCTACTTCCGACAAATCCGTACTCTGCTACAAAAGCTGGAGCAGAAATGCTCGTCATGGCATATGGTAGGTCATATGGATTACCGGTGATCACAACACGTGGAAACAATGTCTATGGCCCGAATCAGTTTCCTGAAAAGTTGATTCCAAAGTTTATCCTCTTGGCAATGCAAGGAAAAGTTCTTCCGATTCATGGTGATGGTTCAAATGTGAGGAGTTATTTGTATTGTGAAGATGTTGCTGAGGCTTTTGAAGTTATCCTTCATAAGGGAGAGGTTGGACATGTTTACAATATTGGAACTAAGAAGGAAAGGAGAGTTATTGATGTAGCCACCGATATTTGCAAACTCTTCTCAATTGATCCGGAGACTAGTATAAAATTTGTAGAGAACAGACCGTTTAATGATCAGAGGTACTTTCTTGATGATCAAAAGTTGAAGGTGTTGGGTTGGTCGGAGAGAACAACATGGGAAGAAGGCTTGAAGAAAACCATGGACTGGTATATCAACAATCCTAATTGGTGGGGCGATGTGAGTGGTGCATTGCTTCCTCATCCGAAAATGTTAATGATGCCTGGTGGGATGGAGAGACATTTCAATGGGTCTGAAGAAGAAAATTCTGCACCGTTTGTCTCAAGTACTAATACTCGAATGGTGGTTCCACCTACAAAGAGCATTGGCTCTTCGCAGAAACCTCCTCTCAAGTTCTTGATCTATGGAAGAACTGGTTGGATCGGTGGTTTGCTTGGGAAATTGTGTGAGAAACAAGGGATTCCATATGAATATGGAAAAGGGCGTCTTGAGGATCGTTCATCACTCGTGGCTGATATTCAGAACGTGAAGCCAACTCATATTTTCAATGCAGCAGGCGTGACGGGAAGACCTAACGTTGATTGGTGTGAATCTCATAAAACTGAAACCATCCGTGTCAACGTTGTTGGGACTTTAACATTGGCTGATGTAAGCAGAGAGCATAACCTTTTGATGATGAACTATGCTACCGGGTGCATATTCGAGTATGATGAAGCTCATCCAGAAGGTTCAGGCATTGGGTTTAAGGAAGAAGACACTCCTAATTTCGCCGGTTCTTTCTATTCCAAAACCAAGGCAATGGTAAGCTAGCTATAACACAATTTAAACTTTTCTTCTGTTTCCATTCTGATTCCTTTTTTTTTTTGAAATCGAGGACACAATTGTACGAGCCTGTTGAACAAATCTTGTTCAAGTAAGACCGTTTTCATTATGATTATGAATATTTCTTAATAATTAATCTGTGAATGTTTCTCAGGTTGAAGAGCTTTTGAAAGACTATGACAATGTATGCACTCTCAGGGTTCGCATGCCAATTTCATCTGACCTAAGCAATCCACGCAATTTCATCACCAAGATTTCACGTTACAATAAAGTAGTCAACATTCCAAACAGCATGACTGTTTTGGACGAACTTCTTCCTATTTCAATTGAGATGGCAAAGAGGAACCTAAGAGGTATCTGGAACTTCACAAATCCTGGCGCCGTGAGCCACAACGAGATTCTCGAGATGTACAAAGACTACATTGATCCAAACTTCAAGTGGGCTAACTTCACACTTGAAGAACAAGCCAAAGTGATAGTTGCTGCAAGAAGCAACAATGAAATGGATGCATCCAAATTGAAGAATGAATTCCCAGAATTGCTTTCCATCAAAGAATCACTTATCAAGTACGTCTTTGAGCTAAACAAGAAAAGTGCTTAA
Protein sequence

>MS.gene94479.t1

MATHTPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLIPSRSSPNFKFVKGDIESADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKVLPIHGDGSNVRSYLYCEDVAEAFEVILHKGEVGHVYNIGTKKERRVIDVATDICKLFSIDPETSIKFVENRPFNDQRYFLDDQKLKVLGWSERTTWEEGLKKTMDWYINNPNWWGDVSGALLPHPKMLMMPGGMERHFNGSEEENSAPFVSSTNTRMVVPPTKSIGSSQKPPLKFLIYGRTGWIGGLLGKLCEKQGIPYEYGKGRLEDRSSLVADIQNVKPTHIFNAAGVTGRPNVDWCESHKTETIRVNVVGTLTLADVSREHNLLMMNYATGCIFEYDEAHPEGSGIGFKEEDTPNFAGSFYSKTKAMVEELLKDYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGAVSHNEILEMYKDYIDPNFKWANFTLEEQAKVIVAARSNNEMDASKLKNEFPELLSIKESLIKYVFELNKKSA