Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94567.t1 | XP_003596710.1 | 96.2 | 339 | 12 | 1 | 1 | 339 | 1 | 338 | 7.10E-188 | 666.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94567.t1 | Q9FMX6 | 32.3 | 251 | 148 | 8 | 37 | 274 | 19 | 260 | 1.3e-25 | 118.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94567.t1 | B7FJQ7 | 96.2 | 339 | 12 | 1 | 1 | 339 | 1 | 338 | 5.1e-188 | 666.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051368 | MS.gene94567 | 0.809363 | 1.96E-50 | -1.69E-46 |
| MS.gene052500 | MS.gene94567 | 0.802232 | 6.18E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene94567 | 0.806291 | 8.83E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene94567 | 0.820327 | 7.27E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene94567 | 0.806789 | 6.94E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94567.t1 | MTR_2g083920 | 96.165 | 339 | 12 | 1 | 1 | 339 | 1 | 338 | 0.0 | 650 |
| MS.gene94567.t1 | MTR_2g083920 | 95.149 | 268 | 12 | 1 | 1 | 268 | 1 | 267 | 0.0 | 535 |
| MS.gene94567.t1 | MTR_2g083920 | 97.959 | 245 | 5 | 0 | 95 | 339 | 1 | 245 | 0.0 | 509 |
| MS.gene94567.t1 | MTR_4g080350 | 74.706 | 340 | 80 | 4 | 1 | 336 | 1 | 338 | 2.84e-178 | 497 |
| MS.gene94567.t1 | MTR_1g038430 | 33.659 | 205 | 125 | 4 | 71 | 266 | 50 | 252 | 6.86e-30 | 119 |
| MS.gene94567.t1 | MTR_7g113530 | 31.797 | 217 | 123 | 10 | 19 | 228 | 8 | 206 | 2.47e-19 | 86.3 |
| MS.gene94567.t1 | MTR_5g004570 | 38.793 | 116 | 67 | 3 | 71 | 183 | 6 | 120 | 1.33e-14 | 72.8 |
| MS.gene94567.t1 | MTR_1g029470 | 42.254 | 71 | 41 | 0 | 71 | 141 | 6 | 76 | 9.85e-13 | 68.9 |
| MS.gene94567.t1 | MTR_1g029460 | 42.254 | 71 | 41 | 0 | 71 | 141 | 6 | 76 | 3.01e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94567.t1 | AT2G42750 | 67.930 | 343 | 105 | 2 | 1 | 338 | 1 | 343 | 2.14e-164 | 462 |
| MS.gene94567.t1 | AT5G23240 | 33.058 | 242 | 140 | 8 | 37 | 265 | 19 | 251 | 7.76e-31 | 121 |
| MS.gene94567.t1 | AT3G05345 | 27.976 | 168 | 110 | 5 | 65 | 228 | 38 | 198 | 1.48e-12 | 67.0 |
| MS.gene94567.t1 | AT1G76700 | 35.537 | 121 | 74 | 3 | 71 | 188 | 6 | 125 | 4.41e-12 | 67.0 |
| MS.gene94567.t1 | AT1G21080 | 38.182 | 110 | 63 | 4 | 71 | 177 | 6 | 113 | 2.77e-11 | 64.7 |
| MS.gene94567.t1 | AT1G21080 | 38.182 | 110 | 63 | 4 | 71 | 177 | 6 | 113 | 2.95e-11 | 64.7 |
Find 89 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTTACTGGGACAATCTT+TGG | 0.195473 | 2.4:+15620199 | MS.gene94567:CDS |
| CAGGTTGCCCTAATGCTTTC+AGG | 0.207601 | 2.4:+15619464 | MS.gene94567:intron |
| TGCCTCTGGAAGTTTAAATT+TGG | 0.208845 | 2.4:-15620774 | None:intergenic |
| AATCCGCAATACCTGAATTT+TGG | 0.216943 | 2.4:-15620239 | None:intergenic |
| TTTGCAATGGAGGAAGATTT+TGG | 0.259435 | 2.4:+15618681 | MS.gene94567:CDS |
| CTGGTAAAACAAATTCTTAC+TGG | 0.267104 | 2.4:+15620187 | MS.gene94567:CDS |
| TTCTTACTGGGACAATCTTT+GGG | 0.269948 | 2.4:+15620200 | MS.gene94567:CDS |
| ATGCAGAAATTAGTGGTTTC+AGG | 0.289737 | 2.4:-15617906 | None:intergenic |
| TTGAGAGCTTCAGTGTAAAA+TGG | 0.290581 | 2.4:-15616748 | None:intergenic |
| GAGGACTATTATGCTGTTCT+TGG | 0.321878 | 2.4:+15616937 | MS.gene94567:CDS |
| GGATTGTTGCCGCTCAAGTC+CGG | 0.330992 | 2.4:-15617885 | None:intergenic |
| ATCATAGACATTTCTCTGAA+TGG | 0.351778 | 2.4:-15618065 | None:intergenic |
| TTACATTGACTCTTTCTATA+CGG | 0.355741 | 2.4:-15619284 | None:intergenic |
| GATGAACATGCAGAAATTAG+TGG | 0.356878 | 2.4:-15617913 | None:intergenic |
| GTCCAATGAATGCAGTCAAC+AGG | 0.364201 | 2.4:-15619222 | None:intergenic |
| CCAAAAGACTACCAAAATTC+AGG | 0.369961 | 2.4:+15620228 | MS.gene94567:CDS |
| ATCCCATTCCTGAAAGCATT+AGG | 0.372089 | 2.4:-15619472 | None:intergenic |
| GCCCTAATGCTTTCAGGAAT+GGG | 0.381238 | 2.4:+15619470 | MS.gene94567:CDS |
| GCCTCTGGAAGTTTAAATTT+GGG | 0.386231 | 2.4:-15620773 | None:intergenic |
| AATGTCTATGATGAAATTCA+TGG | 0.389323 | 2.4:+15618076 | MS.gene94567:CDS |
| GCCCTGTTGACTGCATTCAT+TGG | 0.402450 | 2.4:+15619220 | MS.gene94567:intron |
| TCCTTGCTAGGTTCTGCCTC+TGG | 0.408817 | 2.4:-15620788 | None:intergenic |
| CTGCAGCGGCACGGCGATGG+AGG | 0.415990 | 2.4:+15620720 | MS.gene94567:CDS |
| TCATAGACATTTCTCTGAAT+GGG | 0.419205 | 2.4:-15618064 | None:intergenic |
| CTATTATGCTGTTCTTGGTC+TGG | 0.420117 | 2.4:+15616942 | MS.gene94567:CDS |
| TCCCATTCCTGAAAGCATTA+GGG | 0.432674 | 2.4:-15619471 | None:intergenic |
| AGCGGAAAGAGCCGCTGCAG+CGG | 0.453243 | 2.4:+15620706 | MS.gene94567:CDS |
| TAGGCCTTCTTGATCTGCTC+TGG | 0.453503 | 2.4:-15617837 | None:intergenic |
| AGCTGAGGATTCAGTTTCTC+CGG | 0.454861 | 2.4:+15616897 | MS.gene94567:CDS |
| GAACCCTGAGTTAGTTCAAC+AGG | 0.455813 | 2.4:+15618731 | MS.gene94567:CDS |
| TGCCCTAATGCTTTCAGGAA+TGG | 0.461794 | 2.4:+15619469 | MS.gene94567:CDS |
| CCCGCGCTGGCTGAACACTC+TGG | 0.463804 | 2.4:-15618709 | None:intergenic |
| ATGATGAGACAGGAAAGTTC+TGG | 0.472746 | 2.4:+15620168 | MS.gene94567:CDS |
| CTAACTCAGGGTTCCCGCGC+TGG | 0.472818 | 2.4:-15618722 | None:intergenic |
| TTTGGTCACTTGTCCTTGCT+AGG | 0.473186 | 2.4:-15620800 | None:intergenic |
| ATCTGCTCTGGTGTAGCATC+CGG | 0.476273 | 2.4:-15617825 | None:intergenic |
| TCCTCCATTGCAAATACATC+AGG | 0.478501 | 2.4:-15618672 | None:intergenic |
| ATTTATGTTCTAAAACCTCA+TGG | 0.491060 | 2.4:+15616791 | MS.gene94567:CDS |
| CCAGAGTGTTCAGCCAGCGC+GGG | 0.498774 | 2.4:+15618709 | MS.gene94567:CDS |
| AAAGAGCCGCTGCAGCGGCA+CGG | 0.499674 | 2.4:+15620711 | MS.gene94567:CDS |
| GTTGATGAGTTCAGCTGCAT+AGG | 0.501748 | 2.4:+15618160 | MS.gene94567:CDS |
| TGGTAAAACAAATTCTTACT+GGG | 0.502261 | 2.4:+15620188 | MS.gene94567:CDS |
| GATTGTTGCCGCTCAAGTCC+GGG | 0.502999 | 2.4:-15617884 | None:intergenic |
| ATGGCCTGTTGAACTAACTC+AGG | 0.509082 | 2.4:-15618735 | None:intergenic |
| CTTCGATGATTCTTGCCCGA+AGG | 0.509818 | 2.4:+15618126 | MS.gene94567:CDS |
| AAAATTGAGGATGATGAGAC+AGG | 0.512638 | 2.4:+15620158 | MS.gene94567:CDS |
| ATAAATTCAGTGATGGATTG+TGG | 0.517288 | 2.4:-15616774 | None:intergenic |
| CCATCGCCGTGCCGCTGCAG+CGG | 0.519127 | 2.4:-15620717 | None:intergenic |
| CTTACCACTTTGCATAGCTA+AGG | 0.520061 | 2.4:-15616845 | None:intergenic |
| AGCTTTCATGCAATCATAGT+AGG | 0.520329 | 2.4:-15617856 | None:intergenic |
| TTGACAGGCGAGTTCGCGAT+GGG | 0.524023 | 2.4:+15619832 | MS.gene94567:intron |
| ATAGACATACCAACTGTCAA+TGG | 0.531013 | 2.4:-15618754 | None:intergenic |
| AAAGAGACAGTCAAAAGTCT+TGG | 0.533241 | 2.4:+15619856 | MS.gene94567:CDS |
| TGCAGCGGCACGGCGATGGA+GGG | 0.536072 | 2.4:+15620721 | MS.gene94567:CDS |
| CCGCTGCAGCGGCACGGCGA+TGG | 0.539153 | 2.4:+15620717 | MS.gene94567:CDS |
| TTTGACAGGCGAGTTCGCGA+TGG | 0.540743 | 2.4:+15619831 | MS.gene94567:intron |
| TCTGCAGTAGTAGTATCAAC+CGG | 0.549648 | 2.4:-15616916 | None:intergenic |
| GGCAGGAACGAGCAAAATTG+AGG | 0.551263 | 2.4:+15620145 | MS.gene94567:intron |
| CTTTGTCAGCTTCCTCCATG+AGG | 0.553243 | 2.4:-15616806 | None:intergenic |
| TTAGAACATAAATTCAGTGA+TGG | 0.559447 | 2.4:-15616781 | None:intergenic |
| AGTGGTAAGAGAAGAAAGTG+TGG | 0.560555 | 2.4:+15616859 | MS.gene94567:CDS |
| CTTTGCATAGCTAAGGTACA+AGG | 0.561144 | 2.4:-15616838 | None:intergenic |
| CATTCTGAAAACATCAAATG+AGG | 0.565698 | 2.4:-15619498 | None:intergenic |
| AAATACATCAGGTGCTACAT+TGG | 0.567354 | 2.4:-15618661 | None:intergenic |
| GTGGTAAGAGAAGAAAGTGT+GGG | 0.570832 | 2.4:+15616860 | MS.gene94567:CDS |
| GGGCAAGAATCATCGAAGAA+AGG | 0.574311 | 2.4:-15618121 | None:intergenic |
| ACCTGATGTATTTGCAATGG+AGG | 0.576270 | 2.4:+15618671 | MS.gene94567:CDS |
| TTCAACAGGCCATTGACAGT+TGG | 0.577414 | 2.4:+15618745 | MS.gene94567:CDS |
| AGAATCATCGAAGAAAGGAT+TGG | 0.578646 | 2.4:-15618116 | None:intergenic |
| GCCAGAGTGTTCAGCCAGCG+CGG | 0.589094 | 2.4:+15618708 | MS.gene94567:CDS |
| TCTTACTGGGACAATCTTTG+GGG | 0.591359 | 2.4:+15620201 | MS.gene94567:CDS |
| TCTGGAAGTTTAAATTTGGG+AGG | 0.598932 | 2.4:-15620770 | None:intergenic |
| ATGGAGGGAATACTCAAGGA+AGG | 0.599175 | 2.4:+15620736 | MS.gene94567:CDS |
| GGCGATGGAGGGAATACTCA+AGG | 0.608830 | 2.4:+15620732 | MS.gene94567:CDS |
| TTGCATGAAAGCTTGTCACC+CGG | 0.611593 | 2.4:+15617866 | MS.gene94567:CDS |
| GTAAGAGAAGAAAGTGTGGG+AGG | 0.613692 | 2.4:+15616863 | MS.gene94567:CDS |
| GAGGTTAAGAGTTGCAGCTG+AGG | 0.617730 | 2.4:+15616882 | MS.gene94567:CDS |
| TCCCAAATTTAAACTTCCAG+AGG | 0.617781 | 2.4:+15620772 | MS.gene94567:CDS |
| TCCAATGAATGCAGTCAACA+GGG | 0.618892 | 2.4:-15619221 | None:intergenic |
| GCTTGTCACCCGGACTTGAG+CGG | 0.619849 | 2.4:+15617876 | MS.gene94567:CDS |
| TCCAGAGGCAGAACCTAGCA+AGG | 0.620707 | 2.4:+15620787 | MS.gene94567:CDS |
| AGACGAAACTAAAGAGAGAG+CGG | 0.628610 | 2.4:+15620688 | MS.gene94567:CDS |
| AGCACCTGATGTATTTGCAA+TGG | 0.631860 | 2.4:+15618668 | MS.gene94567:CDS |
| TGGCCTGTTGAACTAACTCA+GGG | 0.638815 | 2.4:-15618734 | None:intergenic |
| TGTACCTTAGCTATGCAAAG+TGG | 0.639784 | 2.4:+15616841 | MS.gene94567:CDS |
| TACACCAGAGCAGATCAAGA+AGG | 0.640176 | 2.4:+15617833 | MS.gene94567:CDS |
| TGGAGGGAATACTCAAGGAA+GGG | 0.650584 | 2.4:+15620737 | MS.gene94567:CDS |
| GGTTGATACTACTACTGCAG+AGG | 0.675077 | 2.4:+15616918 | MS.gene94567:CDS |
| TATGTTCTAAAACCTCATGG+AGG | 0.725021 | 2.4:+15616794 | MS.gene94567:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAGCAAATATTTAAAC+TGG | - | chr2.4:15619994-15620013 | None:intergenic | 15.0% |
| !! | ATTAAGCAAATATTTAAACT+GGG | - | chr2.4:15619993-15620012 | None:intergenic | 15.0% |
| !! | GATAGTTAATAAATATAACA+AGG | + | chr2.4:15620024-15620043 | MS.gene94567:intron | 15.0% |
| !! | TTATGTGTAATAATAAGATA+TGG | + | chr2.4:15617090-15617109 | MS.gene94567:intron | 15.0% |
| !!! | ATAAATTGAATTTTTAAGCT+AGG | + | chr2.4:15617967-15617986 | MS.gene94567:intron | 15.0% |
| !!! | ATCTTATTGTTTTTCTTATA+GGG | + | chr2.4:15617018-15617037 | MS.gene94567:intron | 15.0% |
| !! | AAAAGATTGAAAGAATTCTA+TGG | - | chr2.4:15619326-15619345 | None:intergenic | 20.0% |
| !! | AATAAATTTCGACAACAATT+TGG | + | chr2.4:15619959-15619978 | MS.gene94567:intron | 20.0% |
| !! | ACATTATAGATATTCCAAAA+TGG | + | chr2.4:15618299-15618318 | MS.gene94567:intron | 20.0% |
| !! | ATAATCACTGTTATGAAAAT+TGG | - | chr2.4:15619673-15619692 | None:intergenic | 20.0% |
| !! | ATAGATCAAAAATGTCAAAT+TGG | + | chr2.4:15618883-15618902 | MS.gene94567:intron | 20.0% |
| !! | ATGTTGTTAATTATATTCAG+TGG | + | chr2.4:15617510-15617529 | MS.gene94567:intron | 20.0% |
| !! | ATTTGCTTAATTACATTCAA+TGG | + | chr2.4:15620002-15620021 | MS.gene94567:intron | 20.0% |
| !! | GATAGTTAATGAATGTAATA+AGG | + | chr2.4:15617204-15617223 | MS.gene94567:intron | 20.0% |
| !! | TAATCACTGTTATGAAAATT+GGG | - | chr2.4:15619672-15619691 | None:intergenic | 20.0% |
| !! | TATCAATATCATAACTTCTA+TGG | + | chr2.4:15619065-15619084 | MS.gene94567:intron | 20.0% |
| !! | TGCAAATTTCTATAATCTTA+AGG | - | chr2.4:15617662-15617681 | None:intergenic | 20.0% |
| !!! | AAGAATGTTTTATTTTTGCT+TGG | - | chr2.4:15619639-15619658 | None:intergenic | 20.0% |
| !!! | ATCAAGATTTAAGGTTTATT+TGG | - | chr2.4:15620590-15620609 | None:intergenic | 20.0% |
| !!! | CATTGGTATTTTCTAATAAT+TGG | + | chr2.4:15617782-15617801 | MS.gene94567:intron | 20.0% |
| !!! | GATCTTATTGTTTTTCTTAT+AGG | + | chr2.4:15617017-15617036 | MS.gene94567:intron | 20.0% |
| !!! | TAGAATTCTTTCAATCTTTT+TGG | + | chr2.4:15619326-15619345 | MS.gene94567:intron | 20.0% |
| !!! | TCAGATAGTTTTTAAAACAT+TGG | + | chr2.4:15617765-15617784 | MS.gene94567:intron | 20.0% |
| !!! | TCTTTTTCATGTGATTTTAT+TGG | + | chr2.4:15618013-15618032 | MS.gene94567:intron | 20.0% |
| !!! | TTAAATGATTTTCCTGATAA+TGG | + | chr2.4:15619415-15619434 | MS.gene94567:intron | 20.0% |
| !!! | TTATGATTTGCATTAGTTTA+AGG | - | chr2.4:15620288-15620307 | None:intergenic | 20.0% |
| ! | AAATGTAAGCATACAATCAT+TGG | - | chr2.4:15619596-15619615 | None:intergenic | 25.0% |
| ! | AATGTCTATGATGAAATTCA+TGG | + | chr2.4:15618076-15618095 | MS.gene94567:CDS | 25.0% |
| ! | ACATTAAGTTAGTAATGTCA+TGG | - | chr2.4:15618389-15618408 | None:intergenic | 25.0% |
| ! | AGAAATTTATGACTACATGA+TGG | - | chr2.4:15619720-15619739 | None:intergenic | 25.0% |
| ! | AGTCTATACAAAGCTAATTT+CGG | - | chr2.4:15617338-15617357 | None:intergenic | 25.0% |
| ! | CTTATAAGTTCTGTAACATT+TGG | - | chr2.4:15618233-15618252 | None:intergenic | 25.0% |
| ! | GTACAAACAAAACGAAAAAA+AGG | - | chr2.4:15618211-15618230 | None:intergenic | 25.0% |
| ! | GTTAACACAATTCAAATAGA+TGG | + | chr2.4:15617165-15617184 | MS.gene94567:intron | 25.0% |
| ! | TAAGTCTCTTAAATATGAAC+AGG | + | chr2.4:15619445-15619464 | MS.gene94567:intron | 25.0% |
| ! | TAGAAATGACTGATAAATAC+CGG | - | chr2.4:15618797-15618816 | None:intergenic | 25.0% |
| ! | TATTATGCACTTGATTAGTA+TGG | + | chr2.4:15620089-15620108 | MS.gene94567:intron | 25.0% |
| ! | TGAAAGAATTCTATGGTATA+AGG | - | chr2.4:15619319-15619338 | None:intergenic | 25.0% |
| ! | TGGTAAAACAAATTCTTACT+GGG | + | chr2.4:15620188-15620207 | MS.gene94567:CDS | 25.0% |
| ! | TTAGAACATAAATTCAGTGA+TGG | - | chr2.4:15616784-15616803 | None:intergenic | 25.0% |
| ! | TTGGAATATCTATAATGTGT+AGG | - | chr2.4:15618297-15618316 | None:intergenic | 25.0% |
| ! | TTTCCATAAGATATCTCAAA+CGG | + | chr2.4:15620520-15620539 | MS.gene94567:intron | 25.0% |
| !! | ACTATCTGAAATCACAATTA+CGG | - | chr2.4:15617754-15617773 | None:intergenic | 25.0% |
| !! | GGTATTTTCTAATAATTGGT+TGG | + | chr2.4:15617786-15617805 | MS.gene94567:intron | 25.0% |
| !! | TACTTGAAGTTTAGAATCTT+TGG | + | chr2.4:15619122-15619141 | MS.gene94567:intron | 25.0% |
| !! | TATTTGGATTGACTTATTAG+TGG | - | chr2.4:15620574-15620593 | None:intergenic | 25.0% |
| !! | TGACATTTTTGATCTATTAG+TGG | - | chr2.4:15618880-15618899 | None:intergenic | 25.0% |
| !! | TTGAACATCTGAAAGTTTTA+TGG | + | chr2.4:15617472-15617491 | MS.gene94567:intron | 25.0% |
| !!! | ATTTATGTTCTAAAACCTCA+TGG | + | chr2.4:15616791-15616810 | MS.gene94567:CDS | 25.0% |
| !!! | CTATATGACAATTTTTTGTG+TGG | - | chr2.4:15618841-15618860 | None:intergenic | 25.0% |
| !!! | TTACATTGACTCTTTCTATA+CGG | - | chr2.4:15619287-15619306 | None:intergenic | 25.0% |
| AAATGACGTCAAAAATCGTA+CGG | + | chr2.4:15618480-15618499 | MS.gene94567:intron | 30.0% | |
| ACTAAGCTAACGATGATTAA+TGG | + | chr2.4:15619172-15619191 | MS.gene94567:intron | 30.0% | |
| ACTTAGTGAAAACCATTATC+AGG | - | chr2.4:15619430-15619449 | None:intergenic | 30.0% | |
| ACTTATTAGTGGTTATCTAC+TGG | - | chr2.4:15620563-15620582 | None:intergenic | 30.0% | |
| ATCATAGACATTTCTCTGAA+TGG | - | chr2.4:15618068-15618087 | None:intergenic | 30.0% | |
| ATCTGCATTTACTATTTGAC+AGG | + | chr2.4:15619817-15619836 | MS.gene94567:intron | 30.0% | |
| ATTCTATGGTATAAGGAACA+AGG | - | chr2.4:15619312-15619331 | None:intergenic | 30.0% | |
| CAAAAGGGTCTAACTATATA+TGG | - | chr2.4:15617044-15617063 | None:intergenic | 30.0% | |
| CTGGTAAAACAAATTCTTAC+TGG | + | chr2.4:15620187-15620206 | MS.gene94567:CDS | 30.0% | |
| GGAAAATTGAAATGCTAACA+TGG | - | chr2.4:15619699-15619718 | None:intergenic | 30.0% | |
| GTATAGAAAGAGTCAATGTA+AGG | + | chr2.4:15619286-15619305 | MS.gene94567:intron | 30.0% | |
| GTTATGATATTGATAAGCGA+AGG | - | chr2.4:15619060-15619079 | None:intergenic | 30.0% | |
| TATCTATAATGTGTAGGACT+AGG | - | chr2.4:15618291-15618310 | None:intergenic | 30.0% | |
| TATTGGAAACTGACTATTGT+AGG | + | chr2.4:15618030-15618049 | MS.gene94567:intron | 30.0% | |
| TCAACAAAAACATGATCCTT+CGG | - | chr2.4:15618145-15618164 | None:intergenic | 30.0% | |
| TCATAGACATTTCTCTGAAT+GGG | - | chr2.4:15618067-15618086 | None:intergenic | 30.0% | |
| TGATACAATGCTACAATTCA+AGG | - | chr2.4:15618267-15618286 | None:intergenic | 30.0% | |
| TGCTCTATGATCAAGATTTA+AGG | - | chr2.4:15620599-15620618 | None:intergenic | 30.0% | |
| TTCTACTCAAGTCTTTCAAA+TGG | + | chr2.4:15620650-15620669 | MS.gene94567:intron | 30.0% | |
| TTTCTCATTGCAAAGCTTTA+TGG | - | chr2.4:15618571-15618590 | None:intergenic | 30.0% | |
| TTTGCAATGAGAAATCACAA+AGG | + | chr2.4:15618577-15618596 | MS.gene94567:intron | 30.0% | |
| ! | AAGCTTTATGGATGTATGAT+TGG | - | chr2.4:15618559-15618578 | None:intergenic | 30.0% |
| ! | CAAGTCTTCATTCTTTCTTT+TGG | + | chr2.4:15620356-15620375 | MS.gene94567:intron | 30.0% |
| ! | CATTCTGAAAACATCAAATG+AGG | - | chr2.4:15619501-15619520 | None:intergenic | 30.0% |
| ! | CTCATTTGATGTTTTCAGAA+TGG | + | chr2.4:15619499-15619518 | MS.gene94567:CDS | 30.0% |
| ! | TTGATAACAGATCAAGACAA+AGG | - | chr2.4:15618359-15618378 | None:intergenic | 30.0% |
| !! | ACGTCATTTTAATGTGTTTC+TGG | - | chr2.4:15618469-15618488 | None:intergenic | 30.0% |
| !! | ATAAATTCAGTGATGGATTG+TGG | - | chr2.4:15616777-15616796 | None:intergenic | 30.0% |
| !! | TTTTGCTTGGTCTTTGAATT+AGG | - | chr2.4:15619626-15619645 | None:intergenic | 30.0% |
| AAAATTGAGGATGATGAGAC+AGG | + | chr2.4:15620158-15620177 | MS.gene94567:CDS | 35.0% | |
| AAAGAGACAGTCAAAAGTCT+TGG | + | chr2.4:15619856-15619875 | MS.gene94567:CDS | 35.0% | |
| AATGACGTCAAAAATCGTAC+GGG | + | chr2.4:15618481-15618500 | MS.gene94567:intron | 35.0% | |
| AATGAGCTGAAAACACCTTA+TGG | + | chr2.4:15620493-15620512 | MS.gene94567:intron | 35.0% | |
| ACCGCAAATGCATTTCTAAA+CGG | - | chr2.4:15617617-15617636 | None:intergenic | 35.0% | |
| ACCGTTTAGAAATGCATTTG+CGG | + | chr2.4:15617613-15617632 | MS.gene94567:intron | 35.0% | |
| AGAATCATCGAAGAAAGGAT+TGG | - | chr2.4:15618119-15618138 | None:intergenic | 35.0% | |
| AGAGTTCCTGTAAATAGCAA+TGG | + | chr2.4:15618413-15618432 | MS.gene94567:intron | 35.0% | |
| AGATATGAGAACAGCACTTT+CGG | - | chr2.4:15619791-15619810 | None:intergenic | 35.0% | |
| AGATATTCCAAAATGGTCTC+TGG | + | chr2.4:15618306-15618325 | MS.gene94567:intron | 35.0% | |
| AGCTTTCATGCAATCATAGT+AGG | - | chr2.4:15617859-15617878 | None:intergenic | 35.0% | |
| ATAGACATACCAACTGTCAA+TGG | - | chr2.4:15618757-15618776 | None:intergenic | 35.0% | |
| ATATGCATCACTTTAGTCAC+CGG | + | chr2.4:15618775-15618794 | MS.gene94567:intron | 35.0% | |
| ATGCAGAAATTAGTGGTTTC+AGG | - | chr2.4:15617909-15617928 | None:intergenic | 35.0% | |
| ATGCTAATATAAGCGACTAG+TGG | + | chr2.4:15618906-15618925 | MS.gene94567:intron | 35.0% | |
| ATTCCACACAAGTTAGCAAA+AGG | - | chr2.4:15617060-15617079 | None:intergenic | 35.0% | |
| ATTCTTACTGGGACAATCTT+TGG | + | chr2.4:15620199-15620218 | MS.gene94567:CDS | 35.0% | |
| CAACAAAAACATGATCCTTC+GGG | - | chr2.4:15618144-15618163 | None:intergenic | 35.0% | |
| CCAAAAGACTACCAAAATTC+AGG | + | chr2.4:15620228-15620247 | MS.gene94567:CDS | 35.0% | |
| CTATACAAAGCTAATTTCGG+TGG | - | chr2.4:15617335-15617354 | None:intergenic | 35.0% | |
| GAAACAATACAGCACCTATT+AGG | - | chr2.4:15620337-15620356 | None:intergenic | 35.0% | |
| GATGAACATGCAGAAATTAG+TGG | - | chr2.4:15617916-15617935 | None:intergenic | 35.0% | |
| TCAGTCACAAACTCATTTAG+TGG | + | chr2.4:15618957-15618976 | MS.gene94567:intron | 35.0% | |
| TCCCAAATTTAAACTTCCAG+AGG | + | chr2.4:15620772-15620791 | MS.gene94567:CDS | 35.0% | |
| TCTGGAAGTTTAAATTTGGG+AGG | - | chr2.4:15620773-15620792 | None:intergenic | 35.0% | |
| TCTTATGGAAACAGTCCATA+AGG | - | chr2.4:15620511-15620530 | None:intergenic | 35.0% | |
| TTCCACACAAGTTAGCAAAA+GGG | - | chr2.4:15617059-15617078 | None:intergenic | 35.0% | |
| TTCTTACTGGGACAATCTTT+GGG | + | chr2.4:15620200-15620219 | MS.gene94567:CDS | 35.0% | |
| TTGAGAGCTTCAGTGTAAAA+TGG | - | chr2.4:15616751-15616770 | None:intergenic | 35.0% | |
| ! | AAATACATCAGGTGCTACAT+TGG | - | chr2.4:15618664-15618683 | None:intergenic | 35.0% |
| ! | AATCCGCAATACCTGAATTT+TGG | - | chr2.4:15620242-15620261 | None:intergenic | 35.0% |
| ! | ATTCCATCTGGTGCTAATTT+CGG | - | chr2.4:15617368-15617387 | None:intergenic | 35.0% |
| ! | ATTTCGGTGGACTTTAAATG+AGG | - | chr2.4:15617322-15617341 | None:intergenic | 35.0% |
| ! | CAGAACTTATAAGCGCATTT+TGG | + | chr2.4:15618240-15618259 | MS.gene94567:intron | 35.0% |
| ! | CTACCAAAATTCAGGTATTG+CGG | + | chr2.4:15620236-15620255 | MS.gene94567:intron | 35.0% |
| ! | GAAGGATTTGGTATTGGAAT+TGG | - | chr2.4:15618621-15618640 | None:intergenic | 35.0% |
| ! | GCCTCTGGAAGTTTAAATTT+GGG | - | chr2.4:15620776-15620795 | None:intergenic | 35.0% |
| ! | GCGGATTCAAAAGCATAATA+GGG | + | chr2.4:15620255-15620274 | MS.gene94567:intron | 35.0% |
| ! | GTTCATAAGTTTTCTTCCTG+TGG | + | chr2.4:15619557-15619576 | MS.gene94567:intron | 35.0% |
| ! | TGCCTCTGGAAGTTTAAATT+TGG | - | chr2.4:15620777-15620796 | None:intergenic | 35.0% |
| ! | TGCGGATTCAAAAGCATAAT+AGG | + | chr2.4:15620254-15620273 | MS.gene94567:intron | 35.0% |
| ! | TTTGCAATGGAGGAAGATTT+TGG | + | chr2.4:15618681-15618700 | MS.gene94567:CDS | 35.0% |
| !! | CCTGAATTTTGGTAGTCTTT+TGG | - | chr2.4:15620231-15620250 | None:intergenic | 35.0% |
| !! | GAATGGTAAGAAAAGTGCTA+CGG | + | chr2.4:15619516-15619535 | MS.gene94567:intron | 35.0% |
| !! | GTTCTTCCATTGCTATTTAC+AGG | - | chr2.4:15618422-15618441 | None:intergenic | 35.0% |
| !! | TATGTTCTAAAACCTCATGG+AGG | + | chr2.4:15616794-15616813 | MS.gene94567:CDS | 35.0% |
| !!! | TCGAGTACTTACTAGTTTTC+TGG | + | chr2.4:15620124-15620143 | MS.gene94567:intron | 35.0% |
| !!! | TGGTTCTTTTGACTAGTTTC+CGG | + | chr2.4:15617806-15617825 | MS.gene94567:intron | 35.0% |
| ACCTGATGTATTTGCAATGG+AGG | + | chr2.4:15618671-15618690 | MS.gene94567:CDS | 40.0% | |
| AGACGAAACTAAAGAGAGAG+CGG | + | chr2.4:15620688-15620707 | MS.gene94567:CDS | 40.0% | |
| AGCACCTGATGTATTTGCAA+TGG | + | chr2.4:15618668-15618687 | MS.gene94567:CDS | 40.0% | |
| AGTGGTAAGAGAAGAAAGTG+TGG | + | chr2.4:15616859-15616878 | MS.gene94567:CDS | 40.0% | |
| ATGATGAGACAGGAAAGTTC+TGG | + | chr2.4:15620168-15620187 | MS.gene94567:CDS | 40.0% | |
| ATGTGGCGAATTACATGTAG+TGG | - | chr2.4:15617578-15617597 | None:intergenic | 40.0% | |
| ATTAGGCTAAAACTCACGCT+TGG | - | chr2.4:15620320-15620339 | None:intergenic | 40.0% | |
| CATGTAATTCGCCACATAGT+TGG | + | chr2.4:15617581-15617600 | MS.gene94567:intron | 40.0% | |
| CCAATACCAAATCCTTCAAC+AGG | + | chr2.4:15618624-15618643 | MS.gene94567:intron | 40.0% | |
| CTATTATGCTGTTCTTGGTC+TGG | + | chr2.4:15616942-15616961 | MS.gene94567:CDS | 40.0% | |
| CTCATTTCTGTAAGCTCTAC+AGG | - | chr2.4:15620479-15620498 | None:intergenic | 40.0% | |
| CTTACCACTTTGCATAGCTA+AGG | - | chr2.4:15616848-15616867 | None:intergenic | 40.0% | |
| CTTTCGGACATTGGAAGAAA+AGG | - | chr2.4:15619775-15619794 | None:intergenic | 40.0% | |
| CTTTGCATAGCTAAGGTACA+AGG | - | chr2.4:15616841-15616860 | None:intergenic | 40.0% | |
| GAGGACTATTATGCTGTTCT+TGG | + | chr2.4:15616937-15616956 | MS.gene94567:CDS | 40.0% | |
| TAATCAACTCTGCTTGCCTT+AGG | + | chr2.4:15619032-15619051 | MS.gene94567:intron | 40.0% | |
| TATTCTTTAGACGCAGAAGC+TGG | - | chr2.4:15620071-15620090 | None:intergenic | 40.0% | |
| TCCAATGAATGCAGTCAACA+GGG | - | chr2.4:15619224-15619243 | None:intergenic | 40.0% | |
| TCCTCCATTGCAAATACATC+AGG | - | chr2.4:15618675-15618694 | None:intergenic | 40.0% | |
| TCTGCAGTAGTAGTATCAAC+CGG | - | chr2.4:15616919-15616938 | None:intergenic | 40.0% | |
| TCTTACTGGGACAATCTTTG+GGG | + | chr2.4:15620201-15620220 | MS.gene94567:CDS | 40.0% | |
| TGTACCTTAGCTATGCAAAG+TGG | + | chr2.4:15616841-15616860 | MS.gene94567:CDS | 40.0% | |
| ! | CAATTTTTGCAGCCTGTTGA+AGG | - | chr2.4:15618639-15618658 | None:intergenic | 40.0% |
| ! | CCTGTTGAAGGATTTGGTAT+TGG | - | chr2.4:15618627-15618646 | None:intergenic | 40.0% |
| ! | CGACCGTTTGAGATATCTTA+TGG | - | chr2.4:15620526-15620545 | None:intergenic | 40.0% |
| ! | GTGGTAAGAGAAGAAAGTGT+GGG | + | chr2.4:15616860-15616879 | MS.gene94567:CDS | 40.0% |
| ! | TGCAATTCCAGAGACCATTT+TGG | - | chr2.4:15618316-15618335 | None:intergenic | 40.0% |
| !! | AGCGTGAGTTTTAGCCTAAT+AGG | + | chr2.4:15620320-15620339 | MS.gene94567:intron | 40.0% |
| !! | ATCCCATTCCTGAAAGCATT+AGG | - | chr2.4:15619475-15619494 | None:intergenic | 40.0% |
| !! | TCCCATTCCTGAAAGCATTA+GGG | - | chr2.4:15619474-15619493 | None:intergenic | 40.0% |
| !!! | GTACTTACTAGTTTTCTGGC+AGG | + | chr2.4:15620128-15620147 | MS.gene94567:intron | 40.0% |
| AAGCATATGCGACTACGATG+TGG | + | chr2.4:15617696-15617715 | MS.gene94567:intron | 45.0% | |
| ACCAATAGCTGACTAATCCG+AGG | + | chr2.4:15617268-15617287 | MS.gene94567:intron | 45.0% | |
| AGAACAGCACTTTCGGACAT+TGG | - | chr2.4:15619784-15619803 | None:intergenic | 45.0% | |
| AGCAGTTAGTGTTCCTCTCA+AGG | - | chr2.4:15617402-15617421 | None:intergenic | 45.0% | |
| AGCTGAGGATTCAGTTTCTC+CGG | + | chr2.4:15616897-15616916 | MS.gene94567:CDS | 45.0% | |
| ATGGAGGGAATACTCAAGGA+AGG | + | chr2.4:15620736-15620755 | MS.gene94567:CDS | 45.0% | |
| ATGGCCTGTTGAACTAACTC+AGG | - | chr2.4:15618738-15618757 | None:intergenic | 45.0% | |
| CAATAGCTGACTAATCCGAG+GGG | + | chr2.4:15617270-15617289 | MS.gene94567:intron | 45.0% | |
| CAATTACGGCTGTGATGCTA+AGG | - | chr2.4:15617740-15617759 | None:intergenic | 45.0% | |
| CCAATAGCTGACTAATCCGA+GGG | + | chr2.4:15617269-15617288 | MS.gene94567:intron | 45.0% | |
| GAACCCTGAGTTAGTTCAAC+AGG | + | chr2.4:15618731-15618750 | MS.gene94567:CDS | 45.0% | |
| GCCCTAATGCTTTCAGGAAT+GGG | + | chr2.4:15619470-15619489 | MS.gene94567:CDS | 45.0% | |
| GGGCAAGAATCATCGAAGAA+AGG | - | chr2.4:15618124-15618143 | None:intergenic | 45.0% | |
| GTCCAATGAATGCAGTCAAC+AGG | - | chr2.4:15619225-15619244 | None:intergenic | 45.0% | |
| GTTAGCACAGTCCAACTATG+TGG | - | chr2.4:15617595-15617614 | None:intergenic | 45.0% | |
| TACACCAGAGCAGATCAAGA+AGG | + | chr2.4:15617833-15617852 | MS.gene94567:CDS | 45.0% | |
| TGAGAGGAACACTAACTGCT+AGG | + | chr2.4:15617402-15617421 | MS.gene94567:intron | 45.0% | |
| TGCCCTAATGCTTTCAGGAA+TGG | + | chr2.4:15619469-15619488 | MS.gene94567:CDS | 45.0% | |
| TGGAAACACATGAAGTCCAC+AGG | - | chr2.4:15619576-15619595 | None:intergenic | 45.0% | |
| TGGAGGGAATACTCAAGGAA+GGG | + | chr2.4:15620737-15620756 | MS.gene94567:CDS | 45.0% | |
| TGGCCTGTTGAACTAACTCA+GGG | - | chr2.4:15618737-15618756 | None:intergenic | 45.0% | |
| TTCAACAGGCCATTGACAGT+TGG | + | chr2.4:15618745-15618764 | MS.gene94567:CDS | 45.0% | |
| TTGCAGCCTGTTGAAGGATT+TGG | - | chr2.4:15618633-15618652 | None:intergenic | 45.0% | |
| TTGCATGAAAGCTTGTCACC+CGG | + | chr2.4:15617866-15617885 | MS.gene94567:CDS | 45.0% | |
| TTTAGACGCAGAAGCTGGAA+TGG | - | chr2.4:15620066-15620085 | None:intergenic | 45.0% | |
| ! | CATCTGGTGCTAATTTCGGT+GGG | - | chr2.4:15617364-15617383 | None:intergenic | 45.0% |
| ! | GGTTGATACTACTACTGCAG+AGG | + | chr2.4:15616918-15616937 | MS.gene94567:CDS | 45.0% |
| ! | GTAAGAGAAGAAAGTGTGGG+AGG | + | chr2.4:15616863-15616882 | MS.gene94567:CDS | 45.0% |
| ! | GTTGATGAGTTCAGCTGCAT+AGG | + | chr2.4:15618160-15618179 | MS.gene94567:CDS | 45.0% |
| !! | GACCCTTTTGCTAACTTGTG+TGG | + | chr2.4:15617054-15617073 | MS.gene94567:intron | 45.0% |
| !! | TTGATAAGCGAAGGTGCCTA+AGG | - | chr2.4:15619051-15619070 | None:intergenic | 45.0% |
| !! | AAAATTCAATTTATTTAAAA+TGG | - | chr2.4:15617961-15617980 | None:intergenic | 5.0% |
| !!! | TTTTATTTTATTTTAAAACT+CGG | + | chr2.4:15617238-15617257 | MS.gene94567:intron | 5.0% |
| AAGGTACGACTGTGTGAGTG+AGG | - | chr2.4:15618192-15618211 | None:intergenic | 50.0% | |
| AGGTACGACTGTGTGAGTGA+GGG | - | chr2.4:15618191-15618210 | None:intergenic | 50.0% | |
| AGTGTTCCTCTCAAGGTCTC+AGG | - | chr2.4:15617395-15617414 | None:intergenic | 50.0% | |
| ATCGAACCTGAGACCTTGAG+AGG | + | chr2.4:15617386-15617405 | MS.gene94567:intron | 50.0% | |
| ATCTGCTCTGGTGTAGCATC+CGG | - | chr2.4:15617828-15617847 | None:intergenic | 50.0% | |
| ATGAATGCAGTCAACAGGGC+TGG | - | chr2.4:15619220-15619239 | None:intergenic | 50.0% | |
| ATGCGACTACGATGTGGTCA+CGG | + | chr2.4:15617702-15617721 | MS.gene94567:intron | 50.0% | |
| CAGGTTGCCCTAATGCTTTC+AGG | + | chr2.4:15619464-15619483 | MS.gene94567:intron | 50.0% | |
| CCACCGAAATTAGCACCAGA+TGG | + | chr2.4:15617362-15617381 | MS.gene94567:intron | 50.0% | |
| CGCAACACCTTAACCCATCT+GGG | - | chr2.4:15617433-15617452 | None:intergenic | 50.0% | |
| CTTCGATGATTCTTGCCCGA+AGG | + | chr2.4:15618126-15618145 | MS.gene94567:CDS | 50.0% | |
| CTTTGTCAGCTTCCTCCATG+AGG | - | chr2.4:15616809-15616828 | None:intergenic | 50.0% | |
| GAGGTTAAGAGTTGCAGCTG+AGG | + | chr2.4:15616882-15616901 | MS.gene94567:CDS | 50.0% | |
| GCAACACCTTAACCCATCTG+GGG | - | chr2.4:15617432-15617451 | None:intergenic | 50.0% | |
| GGCAGGAACGAGCAAAATTG+AGG | + | chr2.4:15620145-15620164 | MS.gene94567:intron | 50.0% | |
| GTCTCAGGTTCGATTCCATC+TGG | - | chr2.4:15617380-15617399 | None:intergenic | 50.0% | |
| TAGGCCTTCTTGATCTGCTC+TGG | - | chr2.4:15617840-15617859 | None:intergenic | 50.0% | |
| TCAATTCCACCGTCCACTTG+CGG | + | chr2.4:15617294-15617313 | MS.gene94567:intron | 50.0% | |
| TCGCAACACCTTAACCCATC+TGG | - | chr2.4:15617434-15617453 | None:intergenic | 50.0% | |
| TTTAAATGAGGCCCCGCAAG+TGG | - | chr2.4:15617310-15617329 | None:intergenic | 50.0% | |
| ! | CCATCTGGTGCTAATTTCGG+TGG | - | chr2.4:15617365-15617384 | None:intergenic | 50.0% |
| ! | GCCCTGTTGACTGCATTCAT+TGG | + | chr2.4:15619220-15619239 | MS.gene94567:intron | 50.0% |
| !! | CCCTCGGATTAGTCAGCTAT+TGG | - | chr2.4:15617272-15617291 | None:intergenic | 50.0% |
| AATTCCACCGTCCACTTGCG+GGG | + | chr2.4:15617296-15617315 | MS.gene94567:intron | 55.0% | |
| CAATTCCACCGTCCACTTGC+GGG | + | chr2.4:15617295-15617314 | MS.gene94567:intron | 55.0% | |
| GACGGTGGAATTGAACCCCT+CGG | - | chr2.4:15617288-15617307 | None:intergenic | 55.0% | |
| GATTGTTGCCGCTCAAGTCC+GGG | - | chr2.4:15617887-15617906 | None:intergenic | 55.0% | |
| GGATTGTTGCCGCTCAAGTC+CGG | - | chr2.4:15617888-15617907 | None:intergenic | 55.0% | |
| GGCGATGGAGGGAATACTCA+AGG | + | chr2.4:15620732-15620751 | MS.gene94567:CDS | 55.0% | |
| TCCAGAGGCAGAACCTAGCA+AGG | + | chr2.4:15620787-15620806 | MS.gene94567:CDS | 55.0% | |
| TCCTTGCTAGGTTCTGCCTC+TGG | - | chr2.4:15620791-15620810 | None:intergenic | 55.0% | |
| TTGACAGGCGAGTTCGCGAT+GGG | + | chr2.4:15619832-15619851 | MS.gene94567:intron | 55.0% | |
| TTTGACAGGCGAGTTCGCGA+TGG | + | chr2.4:15619831-15619850 | MS.gene94567:intron | 55.0% | |
| ! | CACCTTAACCCATCTGGGGT+TGG | - | chr2.4:15617428-15617447 | None:intergenic | 55.0% |
| AATGAGGCCCCGCAAGTGGA+CGG | - | chr2.4:15617306-15617325 | None:intergenic | 60.0% | |
| ACTGCTAGGCCAACCCCAGA+TGG | + | chr2.4:15617416-15617435 | MS.gene94567:intron | 60.0% | |
| CTGCTAGGCCAACCCCAGAT+GGG | + | chr2.4:15617417-15617436 | MS.gene94567:intron | 60.0% | |
| GCTTGTCACCCGGACTTGAG+CGG | + | chr2.4:15617876-15617895 | MS.gene94567:CDS | 60.0% | |
| !! | GGCCAACCCCAGATGGGTTA+AGG | + | chr2.4:15617423-15617442 | MS.gene94567:intron | 60.0% |
| AGCGGAAAGAGCCGCTGCAG+CGG | + | chr2.4:15620706-15620725 | MS.gene94567:CDS | 65.0% | |
| CTAACTCAGGGTTCCCGCGC+TGG | - | chr2.4:15618725-15618744 | None:intergenic | 65.0% | |
| ! | CCAGAGTGTTCAGCCAGCGC+GGG | + | chr2.4:15618709-15618728 | MS.gene94567:CDS | 65.0% |
| ! | GCCAGAGTGTTCAGCCAGCG+CGG | + | chr2.4:15618708-15618727 | MS.gene94567:CDS | 65.0% |
| !! | CCCGCGCTGGCTGAACACTC+TGG | - | chr2.4:15618712-15618731 | None:intergenic | 70.0% |
| GAGGCCCCGCAAGTGGACGG+TGG | - | chr2.4:15617303-15617322 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 15616730 | 15620817 | 15616730 | ID=MS.gene94567 |
| chr2.4 | mRNA | 15616730 | 15620817 | 15616730 | ID=MS.gene94567.t1;Parent=MS.gene94567 |
| chr2.4 | exon | 15616730 | 15616963 | 15616730 | ID=MS.gene94567.t1.exon1;Parent=MS.gene94567.t1 |
| chr2.4 | CDS | 15616730 | 15616963 | 15616730 | ID=cds.MS.gene94567.t1;Parent=MS.gene94567.t1 |
| chr2.4 | exon | 15617822 | 15617950 | 15617822 | ID=MS.gene94567.t1.exon2;Parent=MS.gene94567.t1 |
| chr2.4 | CDS | 15617822 | 15617950 | 15617822 | ID=cds.MS.gene94567.t1;Parent=MS.gene94567.t1 |
| chr2.4 | exon | 15618052 | 15618181 | 15618052 | ID=MS.gene94567.t1.exon3;Parent=MS.gene94567.t1 |
| chr2.4 | CDS | 15618052 | 15618181 | 15618052 | ID=cds.MS.gene94567.t1;Parent=MS.gene94567.t1 |
| chr2.4 | exon | 15618646 | 15618766 | 15618646 | ID=MS.gene94567.t1.exon4;Parent=MS.gene94567.t1 |
| chr2.4 | CDS | 15618646 | 15618766 | 15618646 | ID=cds.MS.gene94567.t1;Parent=MS.gene94567.t1 |
| chr2.4 | exon | 15619221 | 15619302 | 15619221 | ID=MS.gene94567.t1.exon5;Parent=MS.gene94567.t1 |
| chr2.4 | CDS | 15619221 | 15619302 | 15619221 | ID=cds.MS.gene94567.t1;Parent=MS.gene94567.t1 |
| chr2.4 | exon | 15619467 | 15619520 | 15619467 | ID=MS.gene94567.t1.exon6;Parent=MS.gene94567.t1 |
| chr2.4 | CDS | 15619467 | 15619520 | 15619467 | ID=cds.MS.gene94567.t1;Parent=MS.gene94567.t1 |
| chr2.4 | exon | 15619839 | 15619877 | 15619839 | ID=MS.gene94567.t1.exon7;Parent=MS.gene94567.t1 |
| chr2.4 | CDS | 15619839 | 15619877 | 15619839 | ID=cds.MS.gene94567.t1;Parent=MS.gene94567.t1 |
| chr2.4 | exon | 15620150 | 15620249 | 15620150 | ID=MS.gene94567.t1.exon8;Parent=MS.gene94567.t1 |
| chr2.4 | CDS | 15620150 | 15620249 | 15620150 | ID=cds.MS.gene94567.t1;Parent=MS.gene94567.t1 |
| chr2.4 | exon | 15620687 | 15620817 | 15620687 | ID=MS.gene94567.t1.exon9;Parent=MS.gene94567.t1 |
| chr2.4 | CDS | 15620687 | 15620817 | 15620687 | ID=cds.MS.gene94567.t1;Parent=MS.gene94567.t1 |
| Gene Sequence |
| Protein sequence |
